##maf version=1 scoring=roast.v3.3 a score=13923.000000 s hg38.chr18_GL383571v1_alt 0 1 + 198278 A s panTro5.chr18 64950738 1 + 78221452 A i panTro5.chr18 N 0 C 0 s panPan2.chr18 64073115 1 + 77229886 A i panPan2.chr18 N 0 C 0 s gorGor5.CYUI01014964v1 5293985 1 + 17472758 A i gorGor5.CYUI01014964v1 N 0 C 0 s nomLeu3.chr4 139329879 1 - 152096393 A i nomLeu3.chr4 N 0 C 0 s rheMac8.chr18 57285432 1 + 70235451 A i rheMac8.chr18 N 0 C 0 s macFas5.chr18 62976805 1 - 75711847 A i macFas5.chr18 N 0 C 0 s macNem1.NW_012016688v1 13529338 1 - 18804593 A i macNem1.NW_012016688v1 N 0 C 0 s cerAty1.NW_012001075v1 13146348 1 + 18905526 A i cerAty1.NW_012001075v1 N 0 C 0 s chlSab2.chr18 59975703 1 - 72318688 A i chlSab2.chr18 N 0 C 0 s manLeu1.NW_012106698v1 310088 1 - 1517660 A i manLeu1.NW_012106698v1 N 0 C 0 s colAng1.NW_012115433v1 3409934 1 + 6513552 A i colAng1.NW_012115433v1 N 0 C 0 s saiBol1.JH378121 19382944 1 - 31320352 A i saiBol1.JH378121 N 0 C 0 s cebCap1.NW_016107689v1 1572368 1 + 2203405 A i cebCap1.NW_016107689v1 N 0 C 0 s aotNan1.NW_018502140v1 3529163 1 - 14941987 A i aotNan1.NW_018502140v1 N 0 C 0 s otoGar3.GL873546 11188172 1 - 20685099 A i otoGar3.GL873546 N 0 C 0 s canFam3.chr1 112251864 1 - 122678785 A i canFam3.chr1 N 0 C 0 s dasNov3.JH575754 414549 1 - 2150887 A i dasNov3.JH575754 N 0 C 0 a score=8554999.000000 s hg38.chr18_GL383571v1_alt 1 748 + 198278 ACATCAAGGT-GGTTACC-AAGTAATGGAGAGCCATCAGCAACACTTAGTTTTTATAAATCTCCAGTGACTGGAGTGGGCCACTGCTCTCTGCCATGATACAGCAACAGG--------ACTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTGGG----GCAGTAACAGCAGCAGTAGATATTCTACATGAGGGAGTTAG-A---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAATAAAAATGTAATCAGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-ACTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCACAAGTCTCTGGTGGT----GAATGACAGTATAT-----TACATTGGTCA--------AGAGGTCCTCATAGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCATTGGGTT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCCAATGAGAGAAGAAGG-CTATCTAGATAAGTGATATGGGAGAATGTAGAGCCCCAACCTGGAAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCGTGGCAACCAGGGGGATGATCCCATGGGCATAGCTAAGAGATGCATGCTCAAGATGATTAAACCCTGCTCAAGATGATTAAAAATG s panTro5.chr18 64950739 732 + 78221452 ACATCAAGGT-GGTTACC-AAGTAATGGAGAGCCATCAGCAACACTTAGTTTTTATAAATCTCCAGTGACTGGAGTGGGCCACTGCTCTCTGCCATGATACAGCAACAGG--------ACTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTGGG----GCAGTAACAGCAGCAGTAGATATTCTACACGAGGGAGTTAG-A---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAATAAAAATGTAATCAGTAAAATAATTATTTCCG----AGTCTGAAATGAACAGCCAAAAAGTGGACTTCTATCTGATTTCATGTGACTCT-GGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-ACTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCACAAGTCTCTGGTGGT----GAATGACAGTATAT-----TACATTAGTCA--------AGAGGTCCTCATAGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCGTTGAGTT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCCAATGAGAGAAGAAGG-CTATCTAGATAAGTGATGTGGGAGAATGTAGAGCCCCAATCTGGAAGGAGGTGATCAAAAGTGGGGATGTAGAAAGTAGTCGTGACAACCAGGGGGTTGATCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTGCTCAAGATGATTAAAAATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64073116 732 + 77229886 ACATCAAGGT-GGTTACC-AAGTAATGGAGAGCCATCAGCAACACTTAGTTTTTATAAATCTCCAGTGACTGGAGTGGGCCACTGCTCTCTGCCATGATACAGCAACAGG--------ACTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTGGG----GCAGTAACAGCAGCAGTAGATATTCTACATGAGGGAGTTAG-A---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAATAAAAATGTAATCAGTAAAATAATTATTTCCG----AGTCTGAAATGAACAGCCAAAAAGTGGACTTCTATCTGATTTCATGTGACTCT-GGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-ACTTTACAGA-GTGAAAATTATTGGCATGGCTAAAATTCTTAAGTCACAAGTCTCTGGTGGT----GAATGACAGTATAT-----TACATTAGTCA--------AGAGGTCCTCATAGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCGTTGAGTT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCCAATGAGAGAAGAAGG-CTATCTAGATAAGTGATGTGGGAGAATGTAGAGCCCCAATCTGGAAGGAGGTGATCAAAAGTGGGGATGTAGAAAGTAGTCGTGACAACCAGGGGGATGATCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTGCCCAAGATGATTAAAAATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5293986 748 + 17472758 ACATCAAGGT-GGTTACCGAAGTAATGGAGAGCCATCAGCAACACTTAGTTTTTATAAATCTCCAGTGACTGGAGTGGGCCACTGCTCTCTGCCATGATACAGCAACAGG--------ACTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTGGG----GCAGTAACAGCAGCAGTAGATATTCTACATGAGGGAGTTAG-A---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAATAAAAATGTAATCAGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGCGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-ACTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCACAAGTCTCTGGTGGT----GAATGACAGTATAT-----TACATTAGTCA--------AGAGGTCCTCATAGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCGTTGGGTT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCCAATGAGAGAAGAAGG-CTATCTAGATAAGTGATATGGGAGAATGTAGAGCCCCAACCTGGAAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCCTGGCAACCAGGAGGATGATCCCATGGGCATAGCTAA-AGATGCATGCTCAAGATGATTAAACCCTGCTCAAGATGATTAAAAATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139329880 732 - 152096393 ACATCAAGGT-GGTTACC-AAGCAACGGAGAGCCATCAGGAACACTTAGCTTTTATAAATCTCCAGTGACTGGAGTGGGCCACTGCTCTCTGCCATGATACAGCAACAGG--------ATTGTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTGGG----GCAGCAACAGCAGCAGTAGATATTCTACATGAGGGAGTTAG-A---ATGTATGTCATTCGGAATAAGGTAACAGGTCTTA-GGTTGGAAGTAAAAATGTAATCAGTAAGATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATGATATTTTGAATTAGCCATGCTACTTAACAA-ACTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCACAAGTCTCTGGTGGT----GAATGACAGTATAT-----TACATTAGTCA--------AGAGGTCCTCATGGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCGTTGGGTT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCCAATGAGAGAAGAAGG-CTATCTAGATAAGTGATGTGGGAGAATGTAGAGCCGCAACCTGGAAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGATCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57285433 734 + 70235451 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCTGCAACACTTAGTTTTTATGAACCTCCAGTGACTACAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTAGG----GCAGCAACAGCAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAAAATGTAATCCGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAAGGTTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCGAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTCGTCA--------AGAGGTACTCATAGGGAACAAAGTAT--TTCCTGAAAGGCATAATGTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCTAATGAGAGAAGAAGG-CTATCTAGATAAGTGAAGTGGGAGAATGTAGAGCCCCATCCTGGGAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACGAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAACG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62976806 734 - 75711847 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCTGCAACACTTAGTTTTTATGAACCTCCAGTGACTACAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTAGG----GCAGCAACAGCAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAAAATGTAATCCGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAAGGTTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCGAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTCGTCA--------AGAGGTACTCATAGGGAACAAAGTAT--TTCCTGAAAGGCATAATGTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCTAATGAGAGAAGAAGG-CTATCTAGATAAGTGAAGTGGGAGAATGTAGAGCCCCATCCTGGGAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAACG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13529339 734 - 18804593 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCTGCAACACTTAGTTTTTATGAACCTCCAGTGACTACAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTAGG----GCAGCAACAGCAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAAAATGTAATCCGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAAGGTTTTGCAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCGAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTCGTCA--------AGAGGTACTCATAGGGAACAAAGTAT--TTCCTGAAAGGCATAATGTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCTAATGAGAGAAGAAGG-CTATCTAGATAAGTGAAGTGGGAGAATGTAGAGCCCCATCCTGGGAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAACG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13146349 733 + 18905526 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCAGCAACACTTAGTTTTTATGAACCTCTAGTGACTACAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATGTTTGGATATTGTTTGTTTAGG----GCAGCAACAGCAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAGAATGTAATCAGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTGTTTAACAA-GCTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCAAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTAGTCA--------AGAGGCACTCATAGGGAACAAAGTAT--TTCCTGAAAATCATAATTTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCTAATGAGAGAAGAAGG-CTATCTAGATAAGTGAAGTGGGAGAATGTAGAGCCCCATCCTGGGAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAACG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59975704 733 - 72318688 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCAGCAACACTTAGTTTTTATAAACCTCCAGTGACTACAGTGGGCCACTACTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATTTGTGGATATTGTTTCTTTAGG----GCAGCAACAGTAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAAAATGTAATCAGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-GCTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCGAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTAGTCA--------AGAGGTACTCATAGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCTAATGAGAGAAGAAGG-CTATCTAGATAAGTGAGGTGGGAGAATGTAGAGCCCCATCCTGGGAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCTTCATGATGATTAAAAACG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 310089 733 - 1517660 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCAGCAACACTTAGTTTTTATGAACCTCTAGTGACTACAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTAGG----GCAGCAACAGCAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAAAATGTAATCAGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTGTCTGATTTCATGTGACTCTTGGATTTTGAAATTATCTCAATTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-GCTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCAAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTAGTCA--------AGAGGCACTCATAGGGAACAAAGTAT--TTCCTGAAAATCATAATTTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-GTTTGTGCTAATGAGAGAAGAAGG-CTATCTAGATAAGTGAAGTGGGAGAATGTAGAGCCCCATCCTGGGAGGAGGTGATCAAAAGTGGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3409935 733 + 6513552 ACATCAAGGT-GGTTACC-AAGCAACTGAGAACCATCAGCAACACTTAGTTTTTATAAACCTCCAGTGACTACAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTATTG------ATTTTTGGATATTGTTTGTTTAGG----GCAGCAACAGCAGCAGTAGATATTCTACATTAGTGAGTTAG-A---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGTTTGGAAGTAAAAATGTAATCAGTAAAATAATTATTTCAG----AGTCTGAAATGAACAGCCAAAAAGTGCACTTCTATCTGATTTCATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATAATATTTTGAATTAGCCATGCTATTTAACAA-GCTTTATGGA-GTGAAAATTATTGGCATGGTTAAAATTCTTAAGTCAAAAGTCTCTGGTGGT----AAATGACAGTATAT-----TACATTGGTCA--------AGAGGTACTCATAGGGAACAAAGTAT--TTCCTGAAAAGCATAATTTAATGTCAGCATTGGGAT-GAATATGAGCATCACTCTAGGTCCTTGGGTG-GTTTGTGCTAATAAGAGAAGAAGG-CTATCTAGATAAGCGAGGTGGGAGAATGTAGAGTCCCATCCTGGGAGGAGGTGATCAAAAGTAGGGATGTAGAAAATAGTCATGGCAACCAGGGGGATGGTCCCATGGGCATAGCTAAGAGATGCA---------------AACCCTCCTCAAGATGATTAAAAACG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105195402 729 + 117903854 ACATCAAGAT-GGTAAGC-AAGCAACGGAGAGCCATCGACAACACT--GTTCTTATCAATCTCCCGCGACTAGAGTGGGCCACTGCTCTCGGCCATGACACAGCAACAGG--------ATTCTGTTGTTCATG------ATTTTTGCATATTGTGTGTTTGGG----GCAGCAACAGCAGCAGTAGATATTCTATATTAGGGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAGTAAAAATGTAATTAGTAAAATAATTACTTCAG----AGTCTGACATGAACAGCT-AAAAGTGCACTTCTATCCGATTATATGTGACTCTTGGATTCTGAAATTACCTCAACTCTGAATAAGA-GTTGAATTAGCCATGCTAGCCAACAA-ACTTTACAGA-GTGAATATGATTGGCATGGTTAAAATTCTAAGGTCACAAGTCTCTTGTGGT----GAATGAGAGTACAT-----TACATTAGTCA--------AGAGGTTCTCATAGGGAACAAACTAT--TTCCTGGAAAGCATAGTTGTATGACAGCGTTGGGCT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-TTTTTTGCCAATGAGAAAAGAAGG-CTATCTAGATAAGTGAGGAGGGAGAATGTAGAGCCCGAACCTGAAAGGAGGTGATCAAAAGTAGGGATGTAGAAAATAGACATGGCAACCAGGGGGATGATCCCATGGGCATAGCCAAGAGATGCG---------------AACCTTCTTCAATATAATTAAAAATG i calJac3.chr13 N 0 I 3 s saiBol1.JH378121 19382945 683 - 31320352 ACATCAAGAT-GGTTACC-AAGCAACTGAGAGCCATCAACAACACT--GTTTTTATAAATCTCCTGTGACTAGAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTACTG------ATTTTTGCACGATGCGTGTTTGGG----GCAGCAACAGCAGTAGTAGATATTCTATATTAGGGAGTTAG-A---ATATATGTTATTTGG-----------------------------------------------AATAATTATTTCAG----AGTCTGACCTGAACAGCCAAAAAGTGCACTTCTATCTGATTACATATGACTCTTGGATTCTGAAATTACCTCTACTCTGAATAAGATTTTGAATTAGCCATGCTACTTAACAA-AC--TACAGA-ATGAATATTATTGGCATGGTTAAAATTCTAAAGTCACAAGTCTCTTGTGGT----GAATGAAAGTATAT-----TGCGTTAGTCA--------AGAGGTTCTCATAGGGAACAAAATAT--TTCCTGGAAAGCATTATTGAATGACAGCGTTGGGTT-GAATACGAGCATCACTCTAGGTCCTTGTGTGATTTGTTGCCAATGAGAAAAGAAGG-CTATCTAGATAAGTGAGGTGGGAGAATGTACAGCTCCAACCTGGAAGGTGGGGATCAAAAGTAGAGATGTAGAAAATAGACATGGGAGCCAGGGGGATGGTCCCATGGGCATAGCCAAGAGATGCA---------------AACCCTCTTCAATATCATTAAAAATG i saiBol1.JH378121 C 0 I 349 s cebCap1.NW_016107689v1 1572369 726 + 2203405 ACATCAAGGT-GGTTACC-AAGCAACTGAGAGCCATCAACAACACT--GTTTTTATAAATCTCCTGTGACTGGAGTAGGCCACTGCTTTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTACTG------ATTTTTGCATATTGTGTGTTT-GG----GCAGCAACAGTAGCAGTAGATATTCTATATTAGGGAGTTAGAA---ATGTATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAGTAAAAATGTAATTAGTAGAATAATTATTTCAG----AGTCTGACATGAACAGCCAAAAAGTGCACTTCTATCTGATTACATGTGACTCTTGGATTCTGAAATTATCTCAACTCTGAATGAGATTTTTAATTAGCTGTGCTATTTAACAA-ACTTTACAGA-GTGAATATTATTGACATGGTTAAAATTCTAAAGTCACAAGTCTCTCGTGGT----GAATGATAGTATA----------TTAGTCA--------AGAGGTTCTCATAGGGAACAAAGTAT--TTCCTGGAAAGCATAATTGAATGACAGCATTGGGTT-GAATATGAGCATCGCTCTAGGTCCCTGTGTG-GTTTTTGCCAATGAGAAAAGAAGG-CTATCTAGATAAGTGAGGTGGAAGAATGTAGAGCCCCAACCTGGAAGGAGGTGATCAAAAGTAGGGATGTAGAAAATAAACATGGCAACCAGGGGAATGGTCCCATGGGCATAGCCAGGAGATGCA---------------AACCCTCTTCAATATAATTAAAAATG i cebCap1.NW_016107689v1 C 0 I 7 s aotNan1.NW_018502140v1 3529164 729 - 14941987 ACATCAAGAT-GGTTACC-AAGCAACTGAGAGCCATCAACAACACT--GTTTTTATAAATCTCCTGTGACTAGAGTGGGCCACTGCTCTCTGCCATGACACAGCAACAGG--------ATTTTGTTGTTACTG------ATTTTTGCATGTTGTGTGTTTGGG----GCAGCAACAGCAGCAGTAGATATTCTATATTAGGGAGTTAG-A---ATATATGTTATTTGGAATAAAGTAACAGGTCTTATGGTTGGAAGTAAAAATGTAATTAGTAAAATAATTATTTCAG----AGTCTGACATGAACAGCCAAAAAGTGCACTTCTATCTGATTACATGTGACTCTTGGATTCTGAAATTACCGCAACTCTGAATAAGATTTTGAATTAGCCATGCTA-TTAACAA-ACTTTACAGA-GTGAAAATTATTGGCATGGTTAAAATTA-AAAGTCACAAGTCTCTTGTGGT----GAATGATAGTATAT-----GACATTAATCA--------AGAGGTTCTCATAGGGAACAAAGTGT--TTCCTGGAAAGCATAATTGAATGACAGTGTTGGGTT-GAATATGAGCATCACTCTAGGTCCTTGTGTG-TTTTTTGCCAATGAGAAAAGAAGG-CTATCTAGATAAGTGAGGTGGGAGAATATAGAGCCCCAACCTGGAAGGAGGTGATCAAAAGTAGGGATGTAGAAAATAGACATGGCAACCAGGGGGGTGGTCCCATGGGCATAGCCAAGAGATGCA---------------AACCCTCTTCAATATAATTAAAAATG i aotNan1.NW_018502140v1 C 0 I 7 s otoGar3.GL873546 11188173 719 - 20685099 ATGTCAGGGT-AGTTGCC-AAGCAACCGAGAAGCATCAGTGACACGTGATGTTTACAAACCTCCAGTGACTCCAGCGGGCCCCTGCCCTC-------------CAGCAGA--------AGTTTACTGTTACAGTGTGGAAGGTTTGTGTCTTAT---TTTAGGGGAAGCAGCCACAGCAGCAGGGGATAGTC-ACATCAGGAAGTACG-ACGGATGTGTGCTGTTTGGAATAAAGTAATAGGACTAATGT----AAATAAACACCTAATTAATAAAGTAACTA-TTCAG----AATCTTAAACGATCTACCAAAAAAGATACATACCTCTTCTTCCATGTGCATCTTGGTTCCTGGAACCGTCCAAACCCTGAATAAGATTTTGAATTAGGCAGATGAGAGAAAAA-AGTTTACCGA-GTGAAAAGTATTGACATGATTAAAGTTCTTAAGGTACAAGTTTCCAGTAGCTTGAAAATGACAGTATTTATATGTGTCTTATACA--------AGAGGTCCTTCTAGGAAGCAAAGCATGCTTTCTGGGACGCATAACTCAATTCATGGATTTGGATAGAATATGAACATCACTCTA-GTCCTCCTGTG--------CCAAGGAG----GAAAG-TTATCTAGATAATCGAGGCAGGAGAATGGAGAGCCCCACCCTG-AGGGAGGTGGCAGACAGCGAGGATCTAGGAA-TAGCGCTGACAACCAGG---ATGATCCCAGAGGCGTCACCAGGAGAAGTG---------------AAGCTTCTTCAAGATGATTAAAAATG i otoGar3.GL873546 C 0 I 6 s canFam3.chr1 112251865 729 - 122678785 ATATCAAGATGGGTTGCC-AAGCAACTAA-------CGATGATACTTCGTTTTTACAAATCTCCAATGACTGAAGTGAACCTCTGCTTTCCTCCATGATGAACCAACAGGAATGTTTAATTTCATTCTTATTA------TTTCTTGTGGATTATATGTTTTAG----GAAGCAACAGGAGCAGCAGATATTCCACATCAGGGAGT-AG-A---ATGTATGCTATTTGGAATGGAATAACAGGTCTTACAGTTGGaaataaaaatttaattagtaaaataattatttCA-----AGGCTGAAATGAGCAAC-AAAAAGTGCGCTTATCTCTGCTTTCATGTGCATCTAGGA-CCCAAAACTGTCTAAACTCTGAATAAGAATTTAAATTAGCCATGAAATGGAACAA-AACTTACAGAGGTGAAAATTATGAGTATGATTAGAATTCTAAAGTTACAAGTCTCTGGTTGA----GCATGATAGTAT-T-----AGCAATTGTGA-------CAGAGGTCCTCTTAGGAAAAAAAAAGT--TTGCTGGGATGCACAAATTAATAATGGCTTTGGGTT-GAATTTCAACATCACTC---AGTCTTTTGTG-GTTTGTGCCAATGAGAGGAGACAG-TTTTCTAGATAATTGAAGTAGGAGAATGTAGGACACCAACCCGGAGGGAAGCCATTAAAAGTGGGGAGGTAGAGAATAGATATGGCGGGCAGGGGGATGGTCCCAGGGACATTGTCATGAAAAGTG---------------AATCTTCTTCAAGACCATTAAAAAGT i canFam3.chr1 C 0 I 6 s dasNov3.JH575754 414550 725 - 2150887 ACATCAGGAT-GGTTGCC-AAGCAACCAAGAACCATCAATGATCCTTAGGCTTTAAAGATCTCCAATGGCTGCAG-GATCCATGGCTCTCCTCCACAACACAGGGACAGGACTGCTAAATTGTATTGTTATTG------TTTTTGTTGTATTGTTTGTTTCCA----GTAGCAACAGCA------AGTATTTCATATTAAGGAGT-AG-A---AAATATTCTAATTGGAATAAAATAAT-GGTCTCAGAGTTGGAAATA---ATTTAATCAGTAAAATAATTATTTCAAAGGCAGTCTGAGA--------CAAAAAGTGTGCTTATCTTTGCTTTCGTGTGCAAGTTACCCCCTGAAACTCACT-AACTCTGAATAAATTTTTGAATTAGTCATACTATT----AA-ATTTTACAAA-GTGAAAAATATTAATATGATTAAAATTCTTAAGTCGCAAGTGTCTGGGTGA----GAACAATGGTATAT-----TATATTGACAGTTGGTGACAGAAATCTACTTAGGGAACAATGTGTGTTTGCTGGGAAGCACAATTTAATCAGGACTTAGAATT-GAATGCAAGGATTACTCTAAGTCCTTTTGTG-CTTTGTGCCAATGAGAGGAGAAGGTTTATCTCAATGATTGCTATAGAAGAATGTGAA--CCCAACCTTAAGGGAGAGGATTAGAAGTGGGCAGTTAGGAGAGGGTTATGGGAGCCAGTGGGATGGCCCCACAGGCAGCAC-ATGAAATATG---------------AGCCATCTTCCAGTGCATTAACA--- i dasNov3.JH575754 C 0 C 0 a score=-11016.000000 s hg38.chr18_GL383571v1_alt 749 2 + 198278 T-G s panTro5.chr18 64951471 2 + 78221452 T-G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64073848 2 + 77229886 T-G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5294734 2 + 17472758 T-G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139330612 2 - 152096393 T-G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286167 2 + 70235451 T-G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977540 2 - 75711847 T-G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530073 2 - 18804593 T-G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147082 2 + 18905526 T-G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976437 2 - 72318688 T-G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 310822 2 - 1517660 T-G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3410668 2 + 6513552 T-G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196134 2 + 117903854 TG- i calJac3.chr13 I 3 I 3 s cebCap1.NW_016107689v1 1573102 1 + 2203405 T-- i cebCap1.NW_016107689v1 I 7 C 0 s aotNan1.NW_018502140v1 3529900 1 - 14941987 T-- i aotNan1.NW_018502140v1 I 7 C 0 s otoGar3.GL873546 11188898 1 - 20685099 C-- i otoGar3.GL873546 I 6 C 0 s canFam3.chr1 112252600 2 - 122678785 T-G i canFam3.chr1 I 6 C 0 e dasNov3.JH575754 415275 0 - 2150887 C e saiBol1.JH378121 19383628 349 - 31320352 I a score=1215931.000000 s hg38.chr18_GL383571v1_alt 751 105 + 198278 TAAAGTCTGT-AAAATCCCAATATGCTTGGTGTGAGTGATTTTGGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTCATATTGGGTCACTGTAGTTAAAGACA s panTro5.chr18 64951473 105 + 78221452 TGAAGTCTGT-AAAATCCCAATATGCTTGGTGTGAGTGATTTTGGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTCATATTGGGTCACTGTAGTTAAAGACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64073850 105 + 77229886 TAAAGTCTGT-AAAATCCCAATATGCTTGGTGTGAGTGATTTTGGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTCATATTGGGTCACTGTAGTTAAAGACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5294736 105 + 17472758 TAAAGTCTGT-AAAATCCCAATATGCTTGGTGTGAGTGATTTTGGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTCATATTGGGTCACTGTAGTTAAAGACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139330614 105 - 152096393 TAAAGTCTGT-AAAATCCCAATATGCTTGGTGTGAGTGATTTTGGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTCATATTGGGTCACTGTAGTTAAAGACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286169 105 + 70235451 GAAAGTCTGT-AAAATCTCAATATGCTTGATGTGAGTGATTTTTGTAGCTGTTATTGAAGTTGATTAAAG-GCTGAGCTTCATATTGGGTCACCAGAGTTACAGACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977542 105 - 75711847 GAAAGTCTGT-AAAATCTCAATATGCTTGATGTGAGTGATTTTTGTAGCTGTTATTGAAGTTGATTAAAG-GCTGAGCTTCATATTGGGTCACCAGAGTTACAGACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530075 105 - 18804593 GAAAGTCTGT-AAAATCTCAATATGCTTGATGTGAGTGATTTTTGTAGCTGTTATTGAAGTTGATTAAAG-GCTGAGCTTCATATTGGGTCACCAGAGTTACAGACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147084 105 + 18905526 GAAAGTCTGT-AAAATCTCAATATGCTTGATGTGAGTAATTTTTGTAGCTGTTATTGAAGTTGATTAAAG-GCTGAGCTTCATATTGGGTCACCATAGTTACAGACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976439 105 - 72318688 GAAAGTCTGT-AAAATCTCAATATGCTTGATGTGAGTGATTTTTGTAGCTGTTATTGAAGCTGATTAAAG-TCTGAGCTTCATATTGGGTCACTGTAGTTACAGACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 310824 105 - 1517660 GAAAGTCTGT-AAAATCTCAATATGCTTGATGTGAGTAATTTTTGTAGCTGTTATTGAAGTTGATTAAAG-GCTGAGCTTCATATTGGGTCACCATAGTTACAGACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3410670 105 + 6513552 GAAAGTCTGT-ACAATCTCAATATGCTTGATGTGAGTGATTTTTGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTCATATTGGGTCACCGTAGTTACAGACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196139 105 + 117903854 CAAAGTCTGT-AAAATCCCAATATGCTTGGTGTGCATGATTTTTGTAGCCGTTATTAAAGCTGATTAAAA-GCCGAGCTTTATATTGGGTCAACGTAGTTAGAGACA i calJac3.chr13 I 3 I 3 s saiBol1.JH378121 19383977 105 - 31320352 TAAAGTCTGT-AAAATCCCAGTACGCTTGGTGTGTGTGATTTTTGTAGCTGTTATTGAAGCTGATTAAAG-GCTGAGCTTTATATTGGGTCAATGTAGTTAGAGACA i saiBol1.JH378121 I 349 C 0 s cebCap1.NW_016107689v1 1573103 101 + 2203405 TCAAGTCTGT-AAAATCCAAATACGCTTGGTGTGTGTGATTTTTGTAGCTGTTACTGAAGCTGATTAAAG-GCTGAGCTTTATAATGGGTCAACG----TAAAGACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3529901 105 - 14941987 TAAAGTCTGT-AAAATCCCAATATGCTTGGTGTGCCTGATTTTTGTAGCTGTTACTGAAGCTGATTAAAG-GCTGAGCTTTATATTGGGTCAATGTAGTTAGAGACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11188899 104 - 20685099 TAAAGTCTGT-AAGATGCAAAAATGTGTGACTGCAGTATGTTCTGTAGCTGTTGGTGAAGTTG-TTAAAG-GGTAAGCTTCTTACTGAGTCATGGTGGTTAGAGAGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112252602 106 - 122678785 TAAAGTCTACAAAAATCCCAAAATGCTTGGTGTGAATGACATTTGTAGTTCATACTGAAGTTGATTAAGG-ACTAAGATTTATGTTGTATCGCTGTAGATATTGACC i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 415275 99 - 2150887 -------TGC-TTGGTGCAAACGTGCGTGGTGAGACTGCTTAGTATATTTGTTATTGAAATTGATTAAAGCACTGAGATCCATGTTGGGCAATCCTACTTAGAGACA i dasNov3.JH575754 C 0 C 0 a score=1686872.000000 s hg38.chr18_GL383571v1_alt 856 160 + 198278 ATAAAATGACATCCCAAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATATAGTAAACAAGTTGGGGCAAGAAA------AGTTCTCCATGTAGGTTGGGATGGCTATAGAGTGGTTCCATTCatatgtctttcaagataacctgc s panTro5.chr18 64951578 160 + 78221452 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATACAGTAAACAAGTTGGGGCAAGAAA------AGTGCTCCATGTAGGTTAGgatggctatggagtggttccattcatatgtctttcaagataacctgc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64073955 160 + 77229886 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATACAGTAAACAAGTTGGGGCAAGAAA------AGTGCTCCATGTAGGTTAGgatggctatggagtggttccattcatatgtctttcaagataacctgc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5294841 160 + 17472758 ATAAAATGACATCCCAAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATATAGTAAACAAGTTGGGGCAAGAAA------AGTGCTCCATGTAGGCtgggatggctatggagtggttccattcatatgtctttcaagataacctgc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139330719 160 - 152096393 ATAAAATGACACCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATATAGTAAACAAGTTGGGGCAAGAAA------AGTGCTCCATGTAGGTtggggtagctatggagtggttccattcacatgtctttcaagacaacctgc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286274 160 + 70235451 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACGATGGAGGCTAAGTTCTAATATAATAAACAAATTGGGGTAAGAAA------AGTGCTCCATGTAGATTGGGATGGCTATGGAGTGGTTCCATTCACATGTCATTCAAGATAACCTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977647 160 - 75711847 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACGATGGAGGCTAAGTTCTAATATAATAAACAAATTGGGGTAAGAAA------AGTGCTCCATGTAGATTGGGATGGCTATGGAGTGGTTCCATTCACATGTCATTCAAGATAACCTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530180 160 - 18804593 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACGATGGAGGCTAAGTTCTAATATAATAAACAAATTGGGGTAAGAAA------AGTGCTCCATGTAGATTGGGATGGCTATGGAGTGGTTCCATTCACATGTCATTCAAGATAACCTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147189 160 + 18905526 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATATAATAAACAAGTTGGGGTAAGAAA------AGTGCTCCATGTAGATTGGGATGGCTATGGAGTGGTTCCATTCACATGTCATTCAAGATAACCTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976544 160 - 72318688 ATAAAATGACATCCCCAAAAACTAAGAAGCAG---AGG---CCAGAACATAACACAACGGAGGCTAAGTTCTAATATAATAAACAAGTTGGGGTAAGAAA------AGTGCTCTATGTAGATTGGGATGGTTATGGAATGGTTCCATTCACATGTCATTCAAGATAACCTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 310929 160 - 1517660 ATAAAATGACATCCCCAAAAATTAAGAAGCAG---AGG---CCAGGACATAACACAATGGAGGCTAAGTTCAAATATAATAAACAAGTTGGGGTAAGAAA------AGTGCTCCATGTAGATTGGGATGGCTATGGAGTGGTTCCATTCACATGTCATTCAAGATAACCTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3410775 159 + 6513552 ATAAAATGACATCCCCCAAAATTAAGAAGCAG---AAG---CCAGAATATAACACAATGGAGGCTCAGTTCTAATATAATAAACAAGTTGGGGTAAGAAA------AGTGCTCCATGTAGACT-Ggatggctatggagtggttccattcacatatcattcaagataacctgc i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384082 160 - 31320352 AGAAAATGACATCCCCAGAAATTGAGAAGCAG---AGG---CCAGAACATAACACAATGCAGGCTAAGTTTTAATATGGTAAGCAAGTTGGGGTAAGAAA------AGCACGCCATGTAGGTtgggatggctatggagtgcctccattcagatgcctttcaagataaactgc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573204 160 + 2203405 AGAAAATGACATCCCCAGAAATTGAGAAGCAG---AGG---CAAGAACATAACACAATGGAGGCTAAGTTCTAATATAGTAAACAAGTTGGGGTAAGAAA------AGCACTCCATGTAGGCTGGGATGGCTATGGAGTGGCTCCATTCATATGTCTTTCAAGATAACCTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530006 160 - 14941987 AGAAAATGACATCCCCAGAAATTGAGAAGCAG---AGG---CCAGAACATAACACAATGGAGGCTAAGTTCTAATATAGTAAACAAGTTGGGGTAAGAAA------AGCTCTCTATTTAGGTtgggatggctatggagtggctccattcatatgtctttcaagataacctgc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11189003 157 - 20685099 AGGAAAGAACAGCCCCAGAAATGGAGAAACAG---AGG-----AGGCCAGAATACAGCAGAGGCCGAGTTCTAATGTAATAA-CAAACTGCCATAGAGAA------AGCTCTCCCAGCAGGCCGTGGTGGCTACTGAGCAGCTCTGCGTGTATGTCTTCCGGGGTAACCTCA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112252711 168 - 122678785 AAAACAGAACATCTT-AGAAATCAAGAAGCAA---AGGAAGCCAGAACATCACATAAGAGAGACTTAGTTCTAATAGAATAAACAGGACATGGTAGGGAAAGCTCTAGCTCTTGATGTGGGTtgtgggagctatggatatgcttcactctgatctctttcaagggaacctgc i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 415374 163 - 2150887 AGGAAAGGATATCCACAGAAATCAACAGGTGGTGAAAA---CCAGAACATACCATCATGGAAGCTCAGTTCTAAGATGAGTAACAGGTGGTGTTATAGAA------AGTTCTAGAAGGAAGTTGTGGTGACCATAGAGATGCTCCCCTCAAATATCTTTCAAAAGAGCCTGC i dasNov3.JH575754 C 0 I 1828 e calJac3.chr13 105196244 3 + 117903854 I a score=1398011.000000 s hg38.chr18_GL383571v1_alt 1016 153 + 198278 agctggatgcataattgaccaatggcctcca-ctgaaggctgaaacccaggttgctcccagccaaagactgaccag------gcaggattactactagcattggcccagtcctgtccaacctgggac-----ccttccaacagacaacct-t-gctcaggtattccc s panTro5.chr18 64951738 153 + 78221452 agctggatgcataattgaccaatggcctcca-ctgaaggctgaaacccaggttgctcgcagccaaagactgaccag------gcaggattactgctagcattggcccactcctgtccaacctgggac-----ccttccaacagacaacct-t-gctcaggtattccc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074115 153 + 77229886 agctggatgcataattgaccaatggcctcca-CTGAAGGCTGAAACCCAGGTTGCTCGCAGCCAAAGACTGACCAG------GCAGGATTACTACTAGCATTGGCCCACTCCTGTCCAACCTGGGAC-----CCTTCCAACAGACAACCT-T-GCTCAGGTATTCCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295001 152 + 17472758 agctggatgcataattgaccaatggcctcca-CTGAAGGCTGAAAcccaggttgctcccagccaaagactgaccag------gcaggattactactagcattggccgagtcctgtccaacct-ggac-----ccttccaacagacaacct-t-gctcaggtattccc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139330879 153 - 152096393 agctggatgcataattgaccaatggcctcca-CTGAAGGCTGAAACCCAGGTTGTTCGCAGCCAAAGACTGACCAG------GCAGGATTACTACTAGCACTGGCCCACTCCTGTCCAACCTGGGAC-----CCTTCCAACAGACAACCT-T-GCTCAGGTATTCCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286434 153 + 70235451 AGCTGTGTATGTAACTGACCAATGGCCTCCA-CTGAAGGCTGAAGcccaggttgctcccagccaaagactcaccag------gcaggattactactagcattggcctactcctgtccaacctgggac-----ctttccaacagacaacct-t-gctcaggtattccc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977807 153 - 75711847 AGCTGTGTATGTAACTGACCAATGGCCTCCA-CTGAAGGCTGAAGcccaggttgctcccagccaaagactcaccag------gcaggattactactagcattggcctactcctgtccaacctgggac-----ctttccaacagacaacct-t-gctcaggtattccc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530340 153 - 18804593 AGCTGTGTATGTAACTGACCAATGGCCTCCA-CTGAAGGCTGAAGcccaggttgctcccagccaaagactcaccag------gcaggattactactagcattggcctactcctgtccaacctgggac-----ctttccaacagacaacct-t-gctcaggtattccc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147349 158 + 18905526 AGCTGTGTATGTAACTGACCAATGGCCTCCA-CTGAAGGCTGAAGcccaggttgctcccagccaaagactcaccag------gcaggattactactagcattggcccactcctgtccaaccgacaaccttgtctttccaacagacaacct-t-gctcaggtattccc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976704 153 - 72318688 AGCTGCGTATGTAACTGACCAATGGCCTCCA-CTGAAGGCTGAAGcccgggttgctcccagccaaagactcaccaa------gcaggattactactagcattggcctactcctgtccaacctgggac-----ccttccaacagacaacct-t-gctcaggtattccc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311089 153 - 1517660 AGCTGTGTATGTAACTGACCAATGGCCTCCA-CTGAAGGCTGAAGcccaggttgctcccagccaaagactcaccag------gcaggattactactagcattggcctactcctgtccaacctgggac-----ctttccaacagacaacct-t-gctcaggtattccc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3410934 153 + 6513552 agctgcgtatgtaactgaccgatggcctcca-CTGAAGGCTGAAGcccaggttgctcccagccaaagactcatcag------gcaggattactactagcattggcccactcccgtccaaccggggac-----ccttccaacagacaacct-t-gctcaggtattccc i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384242 158 - 31320352 agctgggtg-gtaactgaccgacggtctcca-CAAAAGGCTGAAGCCCAGGTTGCTTTCAGCCGAAGACTGACCAGACAGGAGCAGGATTATTATCAGCATTGGTCCACTCCTGTCCAACCTGAGAC-----CCTTCCAACATACAACCT-T-ACTCAGGTATTCCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573364 159 + 2203405 AGCTGGGTGCGTAACTGACCGACGGCCTCCA-CAAACGGCTGAAGCCCAGGTTGCTTTCAGCCAAAGACTGACCACGCGGGAGCAGGATTATTATTAGCATTGGTCCGCTCCTGTCCAACCTGAGCC-----TCTTCTAACACACAACCT-T-GCTCAGGTATTCCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530166 159 - 14941987 agctgggtgcgtaactgaccgacagcctccG-CAAAAGGCTGAAGCCCAGGTTGCTTTCAGCCAAAGACTGACCAGGCAGGAGCAGGATTATTATCAGCATTGGTCCACTCCTGTCCAACCTGAGAC-----TCTTTCAACATACAACCT-T-GCTCAGGTATTCCC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11189160 139 - 20685099 TTCTGGGAGCTTCCCTGATGGACGGCCTCCAGCTGACAGCGGAAGCCCAGATTCCTCCCAGCCCAGGACTGAGCAC--------------------AGCACTGGTCCAGT-CTCCCCAGCATGGG-C-----TCTGCCCACAGGCAGCCTCT-GCTCAGGTGTTTCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112252879 142 - 122678785 ttctgagagta-aactgactgatggcctcca-------gct-AAGCCTGGGAT-TTTTTagccattgatggatcac-----agcaagagtgttatt---actggcc-accccatcccaacaggagac-----tcttccaacaggcagcct-tcactccgatactccc i canFam3.chr1 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e dasNov3.JH575754 415537 1828 - 2150887 I a score=66470.000000 s hg38.chr18_GL383571v1_alt 1169 5 + 198278 caaag s panTro5.chr18 64951891 5 + 78221452 caaag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074268 5 + 77229886 CAAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295153 5 + 17472758 caAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139331032 5 - 152096393 CAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286587 5 + 70235451 caaag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977960 5 - 75711847 caaag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530493 5 - 18804593 caaag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147507 5 + 18905526 caaag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976857 5 - 72318688 caaag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311242 5 - 1517660 caaag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3411087 5 + 6513552 caaag i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384400 5 - 31320352 CAAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573523 5 + 2203405 CAAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530325 5 - 14941987 CAAAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11189299 5 - 20685099 CAAAG i otoGar3.GL873546 C 0 I 1301 s canFam3.chr1 112253021 5 - 122678785 cagac i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 417365 5 - 2150887 CAAAG i dasNov3.JH575754 I 1828 C 0 e calJac3.chr13 105196244 3 + 117903854 I a score=137202.000000 s hg38.chr18_GL383571v1_alt 1174 25 + 198278 tctggg-gaaaaaaaaaa----------tttctgaa s panTro5.chr18 64951896 27 + 78221452 tctggg-ggaaaaaaaaa--------actttctgaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074273 26 + 77229886 TCTGGG-GGAAAAAAAAA---------CTTTCTGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295158 27 + 17472758 TCTGGG-GAAAAAAAAAA--------ACTTTCTGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139331037 27 - 152096393 TCTGGG-AAAAAAAAACA--------ACTTTCTGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286592 25 + 70235451 tctggg-ggaaaaaaaa----------ctttctgaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977965 25 - 75711847 tctggg-ggaaaaaaaa----------ctttctgaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530498 25 - 18804593 tctggg-ggaaaaaaaa----------ctttctgaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147512 24 + 18905526 tct-gg-gaaaaaaaaa----------ctttctgaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976862 25 - 72318688 tctggg-gacaaaaaaa----------ctttctgaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311247 25 - 1517660 tctggg-gaaaaaaaaa----------ctttctgaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3411092 24 + 6513552 tct-gg-gggaaaaaaa----------ctttctgaa i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384405 36 - 31320352 GCTGGGaaaaaaaataaaaataaaaaaCTTTCTGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573528 35 + 2203405 GCTGGG-AAAAAAATAAAAATAAAAAACTTTCTGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530330 35 - 14941987 TCTGGG-AAAAAAATAAAAATAAAAAACTTTCTGAA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112253027 20 - 122678785 cctgcc-aaaaa---------------ctttctagg i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 417370 16 - 2150887 TCTTTG-GAGAAAATAA------------------- i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e otoGar3.GL873546 11189304 1301 - 20685099 I a score=52974.000000 s hg38.chr18_GL383571v1_alt 1199 6 + 198278 aactgT s panTro5.chr18 64951923 6 + 78221452 aactgT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074299 6 + 77229886 AACTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295185 3 + 17472758 AAC--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139331064 6 - 152096393 AACTGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286617 6 + 70235451 aactgT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977990 6 - 75711847 aactgT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530523 6 - 18804593 aactgT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147536 6 + 18905526 aactgT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976887 6 - 72318688 aactgT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311272 6 - 1517660 aactgT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3411116 6 + 6513552 aactgT i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384441 6 - 31320352 AACTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573563 6 + 2203405 AACTGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530365 6 - 14941987 AACTGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11190605 6 - 20685099 AACAGG i otoGar3.GL873546 I 1301 C 0 s canFam3.chr1 112253047 6 - 122678785 aaatgt i canFam3.chr1 C 0 I 3034 s dasNov3.JH575754 417386 1 - 2150887 -----T i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I a score=3116115.000000 s hg38.chr18_GL383571v1_alt 1205 333 + 198278 CTTTTTAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATCCAACTCTGCTTGAAAACCCCCAG-----TAAAATTTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCATGCAAAGCAAAGTAATTCTAGG---ATATCCATCAATGTTAGGCTGTTGTTTTCCTTGCAAGAAATAGAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAAGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CCAACACCCGGTTTCACATAGTCTAATGTGTGTGAAAAACAGGAATTAAAAAGGTTCAAAGGTTCAACACAGTTTCAGAAT- s panTro5.chr18 64951929 332 + 78221452 CTTTTTAATGTATATGCTGTAAAAAATATGTGATATAAACAAATCCATCCAACTCTGCTTTAAAACCCCCAG-----TAAAATTTGCTTGGCTAAAACAACTTTAGTAAGAGAGCCATGCAAAGCAAAGTAATTCTAGG---ATATCCATCAATGTTAGGCTCCTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAAGACCAAA-GTTTAGGAAATTTGTGGTAA-TG-CCAACACCCGGTTTCACATAGTCTAATGTGTGTGAAAAACAGGAATTAAAAAGGTTCAAAGGTTCAACACAGTTTCAGAAT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074305 332 + 77229886 CTTTTTAATGTATATGCTGTAAAAAATATGTGATATGAACAAATCCATCCAACTCTGCTTTAAAACCCCCAG-----TAAAATTTGCTTGGCTAAAACAACTTTAGTAAGAGAGCCATGCAAAGCAAAGTAATTCTAGG---ATATCCATCAATGTTAGGCTCCTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAAGACCAAA-GTTTAGGAAATTTGTGGTAA-TG-CCAACACCCGGTTTCACATAGTCTAATGTGTGTGAAAAACAGGAATTAAAAAGGTTCAAAGGTTCAACACAGTTTCAGAAT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295188 326 + 17472758 ------AATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATCCAACTCTGCTTTAAAACCCCCAG-----TAAAATTTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCATGCAAAGCAAAGTAATTCTAGG---ATATCCATCAATGTTAGGCTGTTGTTTTCCTTGTAAGAAATAGAGATTTA----------TTCGTATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAAGACCAAAAGTTTAGGAAATTTGT-GCAA-TG-CCAACACCCGGTTTCACATAGTCTAATGTGTGTGAAAAACTGGAATTAAAAAGGTTCAAAGGTTCAACACAGTTTCAGAAT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139331070 332 - 152096393 CTTTTTAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATCCAACTCTGCTTTAAAACCCCCAG-----TAAAATTTGCTTGGCTAAAACAATTTTAGTAAGAGAACCATGCAAAGCAAAGTAATTCTAGG---ATATCCATCAATGTTAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAATTTAGGAAATTTGTGGTAA-TG-CCAACACCTGGTTTCACATAGTCTAATGTGTGTGAAAAACAGGAATTAAAAAGGTT-AAAGGTTCAACACAGTTTCAGAAT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286623 333 + 70235451 CTTTCAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATTCAATTCTGCTTTAATGCCCCCAG-----TAAAATCTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCTTGCAAAGCAAGGTAATTCTAGG---ATATTCATCAATGTTAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CAAACACCTGGTTTCACAGAGTCTAATGTGCGTGAAAAACAGGAATGAAAAAGGTTCAAAGGTTCAACACAGTTTCACAAT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62977996 333 - 75711847 CTTTCAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATTCAATTCTGCTTTAATGCCCCCAG-----TAAAATCTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCTTGCAAAGCAAGGTAATTCTAGG---ATATTCATCAATGTTAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATGTAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGTACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CAAACACCTGGTTTCACAGAGTCTAATGTGCGTGAAAAACAGGAATGAAAAAGGTTCAAAGGTTCAACACAGTTTCACAAT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530529 333 - 18804593 CTTTCAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATTCAATTCTGCTTTAATGCCCCCAG-----TAAAATCTGCTTGGCTAAAACAATTTTAGTGAGAGAGCCTTGCAAAGCAAGGTAATTCTAGG---ATATTCATCAATGTTAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CAAACACCTGGTTTCACAGAGTCTAATGTGCGTGAAAAACAGGAATGAAAAAGGTTCAAAGGTTCAACACAGTTTCACAAT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147542 333 + 18905526 CTTTCAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATTCAATTCTGCTTTAATGCCCCCAG-----TAAAATCTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCTTGCAAAGCAAGGTAATTCTAGG---ATATTCATCAATGTCAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CAAACACCTGGTTTCACAGAGTCTAATGTGTGTGAAAAACAGGAATGAAAAAGGTTCAAAGGTTCAACACAGTTTCACAAT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59976893 333 - 72318688 CTTTCAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATCCAATTCTGCTTTAATGCCCCCAG-----TAAAATCTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCTTGCAAAGCAAGGTAATTATAGG---ATATTCATCAATGTTAGGCTCTTGTTTTCCTTATAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-TAAACACCTGGTTTCACAGAGTCTAATGTGTGTGAAAAACAGGAATGAAAAAGGTTCAAAGGTTCAACAGAGTTTCACAAT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311278 333 - 1517660 CTTTCAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATTCAATTCTGCTTTAATGCCCCCAG-----TAAAATCTGCTTGGCTAAAACAATTTTAGTAAGAGAGCCTTGCAAAGCAAGGTAATTCTAGG---ATATTCATCAATGTTAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTCATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CAAACACCTGGTTTCACAGAGTCTAATGTGTGTGAAAAACAGGAATGAAAAAGGTTCAAAGGTTCAACACAGTTTCACAAT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3411122 333 + 6513552 CTTTTAAATGTATATGCTGTAAAAAGTATGTGATATAAACAAATCCATACAATTCTGCTTTAATTGCCCCAG-----TGAAATTTGCTTGGCTAAAATAATTTTAGTAAGAGAATCTTGCAAAGCAAGGTAATTCTAGT---ATATTCATCAATGTTAGGCTCTTGTTTTCCTTGTAAGAAATACAGATTTA----------TTTATATAATATCA----------GGCCATTCAAAGGAT---AACAGGGAGGACCAAAAGTTTAGGAAATTTGTGGTAA-TG-CAAACACCTGGTTTCACAGAGTCTAATGTGTGTGAAAAACAGGAATTAAGAAGGTTCAAAGTTTCAATACAGTTTCACAAT- i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384447 340 - 31320352 CTTTTTAATGTATATGCTGTAAAAACTATGTGATATAGACAAATCCATCCAACTCTGCTTTAAAGCCCCCAG-----TAAAATTTGCTTTGCTAAAACAATTTTACAAAGAGAGCCATGCAAAGCAAGGTAATCCTAGG---ATATTCATCAACATTACGC---TATTTTCCTTCTAAGAAATACAGACTTA----------TTTATATAATATCATATAACAGATGATCATTCAAAGGAT---AACGGGGAGGACCAAAATTTGAGGAAATTTGTTGTAA-TG-CAAACCCCTCTTTTCACAGAGTCTAATGTGTGTGAAAGTCCGGAACCAAAAAGGTTCAAAGGCTCAACATAGTTTCAGAAT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573569 338 + 2203405 CTTTTTAATGTATATGCTGTAAAAACTATGCGATATAAACAAATCCATCCAACTCTGCTTTAAAGCCCCCAG-----GAAAATTTGCTTTGCTAAAACAATTTTACAAAGAGAGTCATGCAAAGCAAGGTAGTTCTAGG---ATATTCATCAACATTAGGC---TTTTTTCCTTCTAAGAAATACAGATTTA----------TTTATATATTATCATATAACAGATGATCATTCAAAGGAT---AACGGGGAGGACCAAAATTTTAGGAAATTTATTGTAA-TG-CAAACCCCTGGTTACACAGAGTCTGATGTGTGTGAAAGTCAGGAACCAAAAAGGTTCAAATGTTCAACATAGTTTCAGA--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530371 340 - 14941987 CTTTTTAATGTATATGCCGTAAAAACTATGTGATATAAACAAATCCATCCGACTCTGCTTTAAAGCCCCCAG-----TAAAATTTGCTTTGCTGAAACAATTTTACAAAGAGAGCCATGCAAAGCAAGGTAATTCTAGG---ATATTCATCAACGTTAGGC---TGTTTTCCTTCTAAGAAATACAGATTTA----------TTTATATAATATCATGTAACAGATGATCATTCAAAGGAT---AACGGGGAGGACCAAAATTTTAGGAAATTTGTTGTAA-TG-CAAACCCCTGGTTTCACAGAGTCTAATGTGTGTGAAAGTCAGGAACCAAAAAGGTTCAAAGGTTCAACATAGCTTCAGAAT- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11190611 324 - 20685099 ATTTCTTATGTACATGATGTGAAAAGTATGTCATAAAAAGAAGCTCACCCAAATCTCCTTCAAAGTGGCCAGTAACATAAAATCTTCTTTGCCAAAATAATTTTAGTCAGAGTGTC--------------ACTTCTAGGATAATATTAATTCACGTTAGGCCCTTTTTTCCCC------ATATATAGACGGA----------GTTACATAATCTCATATAATAGAAAGCCATTTAAAAGATAAGAAGAAGGAAGACCAGCATTTTAGGAAATCTGTGGGCG-TGCCAAACACTCAGCTTCACAAAATCTAACAGATATGCCAATCAGGAA-----------CCAAGGATCAACACAGTTCTAGAAC- i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 417387 339 - 2150887 GTTTTTTACATCTACGCTGTAAAAAGTGTGTGGTATAAACAAACTTACCCATCTCCCCTTCAAAACCCCAAA-----TAAAACTTGATTTACTCAATAAAAGTTGGTGACGGTGTAATGCAAAACATGGTTATTCCAAG---ATATCTATCGTTGTTAGGCATTTTCTTTCTCCGTAAGAAATATAAACTTAAGCAATTTGCTTCATATAATGCAA----------GGTCATTCAAAGTAT---AATGAGGCAGACCGAAATTTTCGAGAATCTGAGGTAACTC-CAAACACCTGGCCTAACATATGATAACATATAC-AAACTCAGAAAATAAAATATTTCAA----CCAGCACAGCTCTA-AGTA i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e canFam3.chr1 112253053 3034 - 122678785 I a score=2101843.000000 s hg38.chr18_GL383571v1_alt 1538 263 + 198278 TCTATTC-CTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ctctctc------------tctctctcA------------------------CACACACACACACAAA-----------------TAATACTTCTAAA-TACTTTTGCATGTTTTATCTGTGCATATTCTTTTGTATTTT---TTTCTTCTTTTA-CTGCCATCAGTAGATTTAAACTTTCTTTGCATTTCTCATTTTA--CA-CA-TTTTGAAAGCAAGAG-----TCTAATTGCA-TTGTGAATA-GTTATCATTATGTTAGGCAGTTAT s panTro5.chr18 64952261 264 + 78221452 TCTATTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ctctctc------------tctctctct------------------------cACATACACACACAAA-----------------TAATACTTCTAAA-TACTTTTGCATGTTTTATCTGTGCATAGTCTTTTGTATTTT---TTTCTTCTTTTA-CTGCCATCAGTAGATTTAAACTTTCTTTGCATTTCTCATTTTA--CA-CA-TTTTGAAAGCAAGAG-----TCTGATTGCA-TTGTGAATA-GTTATCATTATGTTAGGCAATTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074637 265 + 77229886 TCTATTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ctctctc------------tctctctct------------------------cACATACACACACAAA-----------------TAATACTTCTAAATTACTTTTGCATGTTTTATCTGTGCATAGTCTTTTGTATTTT---TTTCTTCTTTTA-CTGCCATCAGTAGATTTAAACTTTCTTTGCATTTCTCATTTTA--CA-CA-TTTTGAAAGCAAGAG-----TCTGATTGCA-TTGTGAATA-GTTATCATTATGTTAGGCAATTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295514 263 + 17472758 TCTATTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ctctctc------------tctttctct------------------------ctcACACACACACAAA-----------------TAATACTTCTAAA-TACTTTTGCATGTTTTATCTGTGCATATTCTTTTTTA-TTT---TTTCTTCTTTTA-CTGCCATCAATAGATTTAAACTTTCTTTGCATTTCTCATTTTA--CA-CA-TTTTGAAAGCAAGAG-----TCTAATTGCA-TTGTGAATA-GTTATCATTATGTTAGGCAGTTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139331402 276 - 152096393 TCTATTCTCTAA-------------TTTTCCTTA---AATC---------------------AGA------CT----TTGtctctcctctcctgcttttctctctcct---------------------ctctctctctctctctcaatctctctct------------------------cACACACACACACAAA-----------------TAATACCTCTAAA-TACTTTTACATGTTTTGTCTGTGCATATTCTTTTGTATTTT---CTTCTTCTTTTA-CTGCCATCAATAGATTCAAACTTTCTTTGCATTTCTCATTTTA--CA-CA-TTTTGAAAGCAAGAG-----TATAATTGCA-TTGTGAATA-GTTATCATTATGTTAGGCAGTTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57286956 294 + 70235451 TCTGTTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc-ctctttctctctct------ctctctc------------tctctctctctctcacacacac----------acacacacacacacaAA-----------------TAATACTTCTAAA-TACTTCTGCATGTTTTGTCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCATCAATAGATTCAAACTTTCTTTGTGTTTCTCATTTTA--TA-CA-TTTTGAAAGGAAGAG-----TCTAATTGGATTTGTGAATA-GTTATCATTATGGTAGACAGTTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62978329 294 - 75711847 TCTGTTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc-ctctctctctctct------ctctctc------------tctctctctctctctctctcac----------acacacacacacacaAA-----------------TAATACTTCTAAA-TACTTCTGCATGTTTTGTCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCATCAATAGATTCAAACTTTCTTTGTGTTTCTCATTTTA--TA-CA-TTTTGAAAGGAAGAG-----TCTAATTGGATTTGTGAATA-GTTATCATTATGGTAGACAGTTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13530862 280 - 18804593 TCTGTTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ctctctc------------tctctctctctctctctctcac----------acacacacacacacaAA-----------------TAATACTTCTAAA-TACTTCTGCATGTTTTGTCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCATCAATAGATTCAAACTTTCTTTGTGTTTCTCATTTTA--TA-CA-TTTTGAAAGGAAGAG-----TCTAATTGGATTTGTGAATA-GTTATCATTATGGTAGACAGTTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13147875 286 + 18905526 TCTGTTCCCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc-------ctctctct------ctctctc------------tctctctctcacacacacacac----------acacacacacacacaAA-----------------TAATACTTCTAAA-TACTTCTGCATGTTTTGTCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCATCAATAGATTCAAACTTTCTT--TGTTTCTCATTTTA--TA-CA-TTTTGAAAGGAAGAG-----TCTAACTGGATTTGTGAATA-GTTATCATTATGGTAGACAGTTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59977226 292 - 72318688 TCTGTTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc-ctctctctctctct------ctctctc------------tctctctctctctctctcacac----------acacacacacacacaAA-----------------TAATACTTCTAAA-TACTTCCGCATGTTTTGTC--TGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCATCAATAGATTCAAACTTTCTTTGTGTTTCTCATTTTA--TA-CA-TTTTGAAAGGAAGAG-----TCTAATTGGATTTGTGAATA-GTTATCATTATGGTAGACAGTTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311611 278 - 1517660 TCTGTTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ccctctc------------tctctctctctctctctcacac----------acacacacacacacaAA-----------------TAATACTTCTAAA-TACTTCTGCATGTTTTGTCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCATCAATAGATTCAAACGTTCTT--TGTTTCTCATTTTA--TA-CA-TTTTGAAAGGAAGAG-----TCTAATTGGATTTGTGAATA-GTTATCATTATGGTAGACAGTTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3411455 276 + 6513552 TGTGTTCTCTAA-------------TTTTCCTTA---CATC---------------------AGA------TT----Ttctctctcctctcctgcttttctctgtctc---------------------ctctctc------------tccctctctctctctctctcAC----------ACACACACAAATAC---------------------AATACTTGTAAA-TACTTTTGCGTGTTTTGTCTGTGCATATTCTTTTGTATTTTC--TTTCTTCTTTTA-CTGCCACCAATAGATTCAAACTTTCTTTGTGTTTCTCATTTTA--CA-CA-TTTTGAAAGGAAGAG-----TCTAATTGGATTTGTGAATA-GTTATCATTATGGTACACAGTTAT i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19384787 263 - 31320352 TCTATTCTCTAA-------------CTTTTCTCA---CATC---------------------AGAAGATTTTT----TTTTCTCTCCTTTCTTGCTCTTCTCTGTC-------------------------------------------------CTCTCTCTCTCTCAT----------ACACACATAAAC----------------------TAATATTTCAAAA-TGCTTTCGCATGTTTTATCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCACTA-TAGGTTCAAACTTTCTTTGTATTTCTCATTTTACACA-CA-TTTTGAAAGGAAGAG-----TCTAATTGCATTTGCTAATA-GTTACC---ATATTAGGCAGACAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1573907 314 + 2203405 ---ATTCTCTAA--------------TTTTCTCA---CATC---------------------AGAAGA---TT----TTTtctctcctttcttgctcttctctgtcct-ctctccctccctctctccctctctctc------------tctctctctctctctctctcac----------acacacacacacacacacacacacacacacacaATAATACTTCTAAA-TGCTTTTGCATGTTTTATCTGTGCATATTCTTTTGTATTTTC--TTTCTTGTTTTA-CTGCCACTA-TAGATTCAAACTTTCTTTGTATTTCTCATTTTACGCA-CA-TTTTGAAAGGAAGAG-----TCTAACTGCATTTGCTAATA-GTTACC---ATATTAGGCAGATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530711 274 - 14941987 TCTATTCTCTAA-------------CTTTCCTCA---CATC---------------------AGAAGA---TT----TTTtctctcctttcttgctcttgtctgtc-----------------------atctctc------------tctgtctttctctctctttctc----------ACGCACATAAAA----------------------TAATACTTCTAAA-TGCTTTTGCAGGTTTTGTCTGTGCATGTTCTTTTGTATTTTC--TTTCTTGTTTTA-CTTCCACTA-TAGATTCAAACTTTCTTTGTATTTCGCATTTTACACA-CA-TTTTGAAAGGAAGAG-----TCTAATTGTATTTGCTAATA-GTTACC---ATATTAGGCAGATAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11190935 336 - 20685099 TTTCCTTTCTGGTATCTGGTCTCTCTTCTCCTTG---CCTCTTCTTGTGCTGCTGCTGCAGTAGC------TTCTGctcctccccctcctcctcctcctcctcctctccctccatctctcctt------ctcTCTCAACT--------TCTCTCTCTTCCTCACACACACATGCAAATTAACATACACACACACAAA-----------------TAATACTTCAAAA-T---------TGTTTAGTCT----ACATTTTTTTGCATTTTC--TTCCTTCTTTTCTCTGCCACCAATTGACCTGAACTTTCTCTGTATTTCTCATTTT---TA-CATTTTTGAGACTAATTG-----TCTTATCTTATTTGCTAATATGCTATCATCATATCATGCAAATAT i otoGar3.GL873546 C 0 I 13 s canFam3.chr1 112256087 218 - 122678785 --------------------------tttctttc---tttc------------------------------tt----tctttctttctttctttctttcttctttctt--------------t------ctttctt------------tctttctttctttctttctttc--------------------------------------------t-------------ttcttctttttttcttttctttctttcttctttctttctttctttttctttctttt-ctttc-----------------ttctttctttctttcttcttt--------tTTTAGAGGATGGAG----ATCTAATAGTATTTGCTAAAA-GTTACCATCATATTGGACGGATAT i canFam3.chr1 I 3034 C 0 s dasNov3.JH575754 417726 231 - 2150887 -TTATTTTCCAA-------------TTGCCCTCATTCTAGC---------------------AGA------TT--------------------------------------------------------CTCTCTA------------CCTTCCCCCCA---------------------AAACAAACA-------A-----------------TAATACTCTGAAA-TT--------TGTTTAGTCTATGCATTTTCTTTTGTTTATTC--TTGCTTCTTTTT-CTGCTACTAATTGATTCAAACAATCTCCATACTTTTCCTTTTA--CATTG-TTTTGAGAGAAAGAGGATGATCTAGTTCCTTTTGCTAATT-GTTACCACCATGTTCAGGAGATAT i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I a score=5408738.000000 s hg38.chr18_GL383571v1_alt 1801 585 + 198278 TTTGAAATCAGGATCATTTTACAACTTTTTGTCCCAAGACATGATAGTCAATGGTAA------AATATGGCCCACTAAGAGTGTAACCTCCACAGAGAATTCTAAGTGTGGCATCTGACCTTAAATTAAATGAGGAATATGGAAATATATGATACCCTTATTGAGAAAGAATGGGCATTGCTCAGTAATATACTGAATTGACAGGAATAAGCcagttatgcaagataga---gatat---cttctggggcaaagggtagcca-gcttactgaccagaataataaaaataacatctccttttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----catataaaaagttcagggttc---ttctgtaacacaatccactgtgtatgtgagg----tgtcacctagccctcttcatgttgccctatgggaattgcagctctgatatctggc-atgataaaa-gccaatactgtggatatgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaagctgcagcaggctaatgtgttaacttacacataaggaaaaaaaaatctctgtcctttcataattct s panTro5.chr18 64952525 540 + 78221452 TTTGAAATCAGGATCATTTTACAACTTTTTGTCCCAAGACATGATAGTCAATGGTAA------AATATGGCCCACTAAGAGTGTAACCTCCACGGAGAATTCTAAGTGTGGCATCTGACCTTAAATTAAATGAGGAATATGGAAATATATGATACCCTTATTGAGAAAGAATGGGCATTGCTCAGTAATATActg---------------------------------------------------gggcaaagggtagcca-gcttactgaccagaataataaaaataacatctccttttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----tgtataaaaagttcagggttc---ttctgtaacacaatccactgtgtatgtgagg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgatatctggc-atgataaaa-gccaatactgtggatatgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgcagcaggctaatgtgttaacttacacataaggaaaaaaacatctctgtcctttcataattct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64074902 540 + 77229886 TTTGAAATCAGGATCATTTTACAACTTTTTGTCCCAAGACGTGATAGTCAATGGTAA------AATATGGCCCACTAAGAGTGTAACCTCCACGGAGAATTCTAAGTGTGGCATCTGACCTTAAATTAAATGAGGAATATGGAAATATATGATACCCTTATTGAGAAAGAATGGGCATTGCTCAGTAATATActg---------------------------------------------------gggcaaagggtagcca-gcttactgaccagaataataaaaataacatctccttttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----tgtataaaaagttcagggttc---ttctgtaacacaatccactgtgtatgtgagg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgatatctggc-atgataaaa-gccaatactgtggatatgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgcagcaggctaatgtgttaacttacacataaggaaaaaaacatctctgtcctttcataattct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5295777 585 + 17472758 TTTGAAATCAGGATCATTTTACAACTTTTTGTCCCAAGACATGATAGTCAATGGTAA------AATATGGCCCACCAAGAGTGTAACCTCCACAGAGAATTCTAAGTGTGGCATCTGACCTTAAATTAAATGAGGAATACGGAAATATATGATACCCTTATTGAGAAAGAATGGGCATTGCTCAGTAATATCCTGAATTGACAGGAATGCGCcagttatgcaagataga---gatat---cttctggggcaaagggtagcca-gcttactgaccagaataataaaaataacatctccttttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----cgtataaaaagttcagggttc---ttctgtaacacaatccactgtgtatgtgagg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgatatctggc-atgataaaa-gtcaatactgtggatatgactgttggtgtgagtcataaaatcttttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgcagcaggctaatgtgttaacttacacataaggaaaaaaaaatctctgtcctttcataattct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139331678 581 - 152096393 TTTGAAATCGGGATCATTTTACAACTTTTTGTCCCAAGACATGATAGTCAATGGTAA------AATATGGCCTACTAAGACTGTAACCGCCACAAAGAATTCTAAGTGTGGCATATGACCTTAAATTAAATGAGGAATATGGAAATATATGACACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATATACTGAATTGACAGGAATGAGCCAATTAtgcaagataga---gatat---cttctggggcaaagggtagccatgcttactgaccagagtaataaaaat---atctccttttggcacaaagcacattcaagcttgat---------------------------------------------------------cacc-----agtataaaaagttcagggttc---ttctgtaacacaatctactgtgtatgtgagg----tgtcacctagccctcttcatgttaccctatgggaattgcagctgtgatatctggc-atgataaaa-gccaatactgtgcatatgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgcagcaggctaatatgttaacttacacataaggaaaaaaa-atctctgtcc-ttcataatCTT i nomLeu3.chr4 C 0 I 112 s rheMac8.chr18 57287250 594 + 70235451 TTTGAAATCAGGATCATTTTACAActttttgtcccaagacatgatagtcagtggtaaataaagaatatggcccactaagactctaacctccacagagaattctaagtgtggcagAGGACCTTAAATTAAATGAGAAATATGGAAATACATGATACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTAAAGTGACAGGAATGAGCcaattatgcaagataga---ggtat---cttctggagcaaagggtagccatgcttactgaccagaataataaaaataacatctccccttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attatcgaaagttcaggggtcttgttctgtaacacaatccactgtgtatgtgatg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgccgcaggctaatgtgttagcttacatgtaaggaaaaaaa-atctctgtcctttcataattct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62978623 594 - 75711847 TTTGAAATCAGGATCATTTTACAACTTTTTGTCCCAAGACATGATAGTCAGTGGTAAATAAAGAATATGGCCCACTAAGACTCTAACCTCCACAGAGAATTCTAAGTGTGGCAGAGGACCTTAAATTAAATGAGAAATATGGAAATACATGATACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTAAAGTGACAGGAATGAGCcaattatgcaagataga---ggtat---cttctggagcaaagggtagccatgcttactgaccagaataataaaaataacatctccccttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attatcgaaagttcaggggtcttgttctgtaacacaatccactgtgtatgtgatg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgccgcaggctaatgtgttagcttacatgtaaggaaaaaaa-atctctgtcctttcataattct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13531142 594 - 18804593 TTTGAAATCAGGATCATTTTACAActttttgtcccaagacatgatagtcagtggtaaataaagaatatggcccactaagactctaacctccacagagaattctaagtgtggcagAGGACCTTAAATTACATGAGAAATATGGAAATACATGATACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTAAAGTGACAGGAATGAGCcaattatgcaagataga---ggtat---cttctggagcaaagggtagccatgcttactgaccagaataataaaaataacatctccccttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attatcgaaagttcaggggtcttgttctgtaacacaatccactgtgtatgtgatg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgccgcaggctaatgtgttagcttacatgtaaggaaaaaaa-atctctgtcctttcataattct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13148161 593 + 18905526 TTTGAAATCAGCATCATTTTACAActttttgtcccaagacatgatagtcaatggtaaataaagaatatggcccactaagactctaacctccacagagaattctaagtgtggcagATGACCTTAAATTAAATGAGAAATATGGAAATACATGATACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTGAAGTGACAGGAATGAGCcaattatgcaagataga---ggtat---cttctggagcaaagggtagccatgcttactgaccagaataataaaaataacatctccccttggcacaaagaacagtgaagcttaat---------------------------------------------------------cacc-----attatcgaaagttcagggctcttgttctgtaacacaatccactgtgtatgtgatg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgccgcaggctaatgtgttagcttacatgtaagg-aaaaaa-atctctgtcctttcataattct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59977518 593 - 72318688 TTTGAAATCAGGATCATTTTACAACTTTGTGTCCCAAGACATGATAGTCAATGGTAAATAAAGAATATGGCCCACTAAGACTCTAACCTCCACAGAGAATTCTAAGTGTGGCAGATGACCTTAAATTAAATGAGAAATTTGGAAATACATGATACCTTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTGAAGTGACAGGAATGAGCcaattatgcaagataga---ggtat---cttctggagcaaagggtagccatgcttactgaccagaataataaaaataacatctccccttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attataaaaagttcagggctcttgttctgtaacataatccaatgtgtatgtgatg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggaatct-cttgtcttctgct----ttcatggaactgccgcaggctaatgtgttagcttacatgtaagg-aaaaaa-atctctgtcctttcataattct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 311889 593 - 1517660 TTTGAAATCAGGATCATTTTACAActttttgtcccaagacatgatagtcagtggtaaataaagaatatggcccactaagactctaacctccacagagaattctaagtgtggcagAGGACCTTAAATTAAATGAGAAATATGGAAATACATGATACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTAAAGTGACAGGAGTGAGCcaattatgcaagataga---ggtat---cttctggagcaaagggtagccatgcttactgaccagaataataaaaataacatctccccttggcacaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attatcgaaagttcaggggtcttgttctgtaacacaatccactgtgtatgtgatg----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttgtcttctgct----ttcatgaaactgccgcaggctaatgtgttagcttacatgtaagg-aaaaaa-atctctgtcctttcataattct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3411731 590 + 6513552 TTTGAAATCAGGATCATTTTACAACTTTTTGTCCCAAGACATGATAGTCAATGGTAGATAAAGAATATGGCCCACTAAGACTCTAACCTCTACAGAGAATTCTAAGTGTGGCAGATGACCTCAAATTAAATGAGAAATATAGAAACACATGATACCCTTATTGAGAAGGAATGGGCATTGCTCAGTAATGTACTGAAGTGACACGAATGAGCcaattatgcaagataga---gatat---cttctggagcaaagggtagccatgcttactgaccag---aataaaaataacatctccccttggcacaaagcacagtgaagcttaat---------------------------------------------------------cacc-----attataaaaagttcaaggctcttgttctgtaacacaatctactgtatatgtgaca----tgtcacctagccctcttcatgttaccctatgggaattgcagctctgagatctggc-atgataaaa-gccaatactgtggatttgactgttggtgtgagtcataaaatcctttgtctctgactcaggagtct-cttatcttctgct----ttcatgaaactgccacaggctaatgtgttagcttacatttaagg-aaaaaa-atctctgtcctttcataattct i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19385050 597 - 31320352 TTTGAAATCAGCATCATTTTACAAC-TTTTGTCTCAAGACATGATAGTCAATGTTAA-TGAAAAATATGGTCTACTAAAACTCTAACCTCTATAGAGAATTCTAGGTGTGACAGATGACCTTAAATTGAATGTGGATTATGGAAATACATGATACCCTTATTGAGAAGGAATGAACATTGCTCAGTAATGCACTGAATTGGCAAGAATGAGCCAATTAtgaaagatagatgtagtat---cttctggggcaaagggtag-catgtttacttaccagaataataaaaataacaactccctttggagcaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attataaaaggttcagggttcttcttatataacacaatccactgtgtacataaggtgtctgtcacctagccctcttcatgttaccctgtgggaattggagctctgagatatgac-atgataaaa-gctgatagagtggatatgactgttggtgtgagtcataaaatcctttgtctctaactcaggagtct-cttatcttctgct----ttcataaaactgcagcaggctaatatgttagcttgcacataagg-aaaaca-atctctgtcttttcataattct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1574221 593 + 2203405 TTTGAAATCAGCATCATTTTACAAC-TTTTATCTCAAGACATGATAGTCAATGTTAA-TGAAAAATATGGTCCACTAAAACTCTAACCTCCATAGAGAATTCTAGGTGTGACGGATGACCTTAAATTAAATGTGGATTATGGAAATACATGATACCCTTATTGAGAAGGAATGAACATTGCTCAGTAATGTACTGAATTGGCAGGAATGagcctattatggaagatagatgcagtat---cttttggggcaaagggcagccatgtttacttaccggaataataaaaataacatctccctttggagcaaaacacagtcaagcttaat---------------------------------------------------------cacc-----attataaaatgtttaaggttcttcttatataacacaatccactgtgtacatgaga----tgtcacctagccctcttcatgttaccctgtgggaattggagctctgagatctggc-atgataaaa-gctgatagagtgggtctgactattgatgtgagtcataaaatcctttgtctctaactcaggagtct-tttatcttctgct----ttcatgaaactgcagcaggctaatgtgttagcttgcacataagg--aaaca-atctctgtcctttcataattct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3530985 595 - 14941987 TTTGAAATCAGGGTCATTTTACAACTTTTTGTCTCAAGACATGATAGTCAATGTTAA-TGAAAAATATGGTCCACTAAAACTCTAACCTCCATAGAGAATTCTAGGTGTGACAGATGACCTTAAATTAAAGGCGGATTATGGAAATACATGATACCCTTATTGAGAAGGAATGAACATTGTTCAGTAATGTACAGAATTGACAGGAATGAGCCAATTCtggaagatagatgtagtat---cttctggggcaaagggtagccatgtttacttaccagaataataaaaataacatctccctttggagcaaagcacagtcaagcttaat---------------------------------------------------------cacc-----attataaaaggttcagggttcttcttatataacataatccactgtgtacatgagg----tgtcacgtagccctcttcatgttaccctgtgggaattggagctctgagatctggc-atgataaaa-gctgatagagtggatatgactgttggtgtgagtcataaaatcctttgtctctaactcaggagtct-cttatcttctgct----ttcgtgaaactgcagcaggctaatgtgttagcttgcacataagg-aaaaaa-atctctgtcctttcataattct i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112256305 573 - 122678785 TTTGAAACCAG-ATCAACTTACAATTTGTTGTCTCAAGAGATGAGGGCCAGTGGTAA----AAAATGTGGCCGACCAAAACTCTAATCTCTAAAGAGAATTTAAGGGGTGACAGTTTACCTTAGAT-----GAGGAAAACAGGGATACAGGATACCATTGTTGAGGAGAAA---------CTCAATGCCATGCTGAACTGATAGGAAAGAGTcaatcttgaaaagtaaa---agtgt--ccttctgaagctcagtgtaggcgtgcttactgaccagtataataaatataacatctccttctggaagagaagacagtcaggctgaat---------------------------------------------------------gact-----gttaccaaagattcagggttccttctctgtaatac-atctacggtgtgtgc-agg----actcacctggccttctttagaacaccctctgggactgagcgcaccaagaactggc-acaatgacgtgctagtactttggatatggctgttcgtctgagtaataaagttcttggtctttga--caggactct-cctgttttctgccatcattcatgaaactatagcagcctgacgtgtcagcttataaatcaag---caga-atcctggtcc-tccacagttct i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 417957 638 - 2150887 ----------------TCTCACAATGTATTGTCCCAAGGGATGAGAGTCAATAGTAA----AGAATATGGCTACCTAAAACTCCCACCTTAATGCGGAATTCTAGGTATGAAAGTCTACCTTAAAT-----AAGGAACGATGGATTAGGGTATACCATTACTGAGGAGGAA-AGACATCATGTCGTAGTCTACTGAGTTGACAGtaatgaactaaccttggaagatacaaagaatgtctccttctgaagcaaaggacaggtttgcttacagtcttggaagacagagacagggtctccctttgaaccacggggtaggcatgctttattgatcaataaaacaatggttatacctccctctggaaaaaaaaaaaaaacaggcaacacaccccccaattataaaagactcagggatccttttttgcaacacaacccactgtgtgtgc-agg----tgtcatcttgctctcttcacatcaccctgtggaaatcagagttttgagaaatgacaattaaaaat-gctaatacatgggatactactattgttgtgaatagtaaagtcctctgtctctgtctcaggggtctgggtatcttctgctagaatccatgatagaatggcaggctaaattgttagcttgaaagtag---aataaa-atcacacacttttcaaagttct i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e otoGar3.GL873546 11191271 13 - 20685099 I a score=855587.000000 s hg38.chr18_GL383571v1_alt 2386 106 + 198278 taacaGttctggtgataaagatggggttgctgagaggaacatggatttttgaaaaaggaaggaaggatgaggacctcatgagctgattaacatgatatgaggaaag s panTro5.chr18 64953065 102 + 78221452 taacaGttctggcaataaagatggggttgctgagaggaacatggatttttgaaaaaggaagga----tgaggacctcatgagctgattaacatgatatgaggaaag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64075442 102 + 77229886 taacaGttctggcgataaagatggggttgctgagaggaacatggatttttgaaaaaggaagga----tgaggacctcatgagctgattaacatgatatgaggaaag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5296362 106 + 17472758 taacaGttctggtgataaagatggggttgctgagaggaacatggattttttaaaaaggaaggaaggatgaggacctcatgagctgattaacatgatatgaggaaag i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57287844 100 + 70235451 taacaGttctggtgataaagat-gagttgctgagagcagcgtggatttttgaaaaaggaagga----tgaagacctcatgagttgattgacatgatatgaggaag- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62979217 100 - 75711847 taacaGttctggtgataaagat-gagttgctgagagcagcatggatttttgaaaaaggaagga----tgaagacctcatgagttgactgacatgatatgaggaag- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13531736 100 - 18804593 taacaGttctggtgataaagat-gagttgctgagagcagcatggatttttgaaaaaggaagga----tgaagacctcatgagttgattgacatgatatgaggaag- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13148754 101 + 18905526 aaacaGttctggtgataaagat-gagttgctgagagcaacatggatttttgaaaaaggaagga----tgaggacctcatgagttgattgacatgatatgaggaaag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59978111 101 - 72318688 gaacaGttctggtgataaagat-gagttgctgagagcaacatggatttttgaaaaaggaagga----tgaggatctcatgagttgattgacatgatatgaggaaag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 312482 100 - 1517660 taacaGttctggtgataaagat-gagttgctgagagcagcatggatttttgaaaaaggaagga----tgaagacctcatgagttgattgacatgatatgaggaag- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3412321 101 + 6513552 taacaGttctggtgataaagat-gggttgctgagaggaacatggatttttaaaaaaggaagga----tgaggacctcatgagttgattgacatgatatgaggaaag i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19385647 101 - 31320352 taacaGttctgataataaagat-gggttgctgagagaaacatggatttttggaaaaggaagga----tgggaacctcatgagttgattaacatgatatgaggaaag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1574814 101 + 2203405 taacaGttctggtgataaagat-gggttgctgagagaaacatggatttttggaaaaggaagga----tgggaacctcatgagttgattaacatgatatgaggaaag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3531580 101 - 14941987 taacaGttctggtgataaagat-gggttgctgagagaaacatggatttttggaaaaggaagga----tgataacctcatgagttgattaacatgatatgaggaaag i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112256878 101 - 122678785 tagcaAttttggtggtgagcat-ggaatgtggaaaggaacacaaatttctagaagtgaaagga----tgaggaattcacgggctagttgacctggagtgaggaaag i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 418595 100 - 2150887 cgacTGttgtggtgatgaggct-gggatgctgacagaaacatggacttttagacaaggaaaga----t-agagttttacaaactgatttacaggatttgagggagg i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e otoGar3.GL873546 11191271 13 - 20685099 I e nomLeu3.chr4 139332259 112 - 152096393 I a score=3258424.000000 s hg38.chr18_GL383571v1_alt 2492 348 + 198278 tccataagaat---taa---taaacatattgactaaaatatatggtcaatcaagtaatatgtcatccttctgtcagt-tattggaggtatggttgcaggctgaacctaccaagaagtaggttcagagacaaatgcctgaacattgcctggcctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaacaaccagtactaagatttgtcctgg------gaagccaaaagtttccaattcctttcag-a---aaaaaaaaaaaaaa----------ggtt-aaatagctgagcacctatattgagagagaatagatggaaacttgtagc----ctatgggcataacacaaatacattattaga s panTro5.chr18 64953167 351 + 78221452 tccataagaat---taa---taaacatattgactaaaatatatggtcaatcaagtaacatgtcatccttctgtcagt-tattggaggtatggttgcaggctgaacctaccaagaagtaggttcagagacaaatgcctgaacattgcctggcctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaacaaccagtactaagatttgtcctgg------gaggccaaaaggttccaactcctttcag-a---aaaaaaaaaaaaaa-------aaaggtt-aaacagctgagcacctatattgagagagaatagatggaaacttgtagc----ctatgggcataacacaaatacattattaga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64075544 353 + 77229886 tccataagaat---taa---taaacatattgactaaaatatatggtcaatcaagtaacatgtcatccttctgtcagt-tatcggaggtatggttgcaggctgaacctaccaagaagtaggttcagagacaaatgcctgaacattgcctggcctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaacaaccagtactaagatttgtcctgg------gaggccaaaaggttccaactcctttcag-a---aaaaaaaaaaaaaa------aaaaggttaaaacagctaagcacctatattgagagagaatagatggaaacttgtagc----ctatgggcataacacaaatacattattaga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5296468 358 + 17472758 tccataagaat---taa---taaacatattgactaaaatatatggtcaatcaagtaatatgtcatccttctgtcagt-tattggaggtatggttgcaggctgaacctaccaagaagtaggttcagagtcaaatgcctgaacattgcctggcctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaacaaccagtactaagatttgtcctgg------gaagccaaaagtttccaattcctttcag-a---aaaaaaaaaaaaaaaaaaaaaaaaggtt-aaatagctgagcacctatattgagagagaatagacggaaacttgtagc----ctatgggcataacacaaatacattattaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139332371 346 - 152096393 TCCATAACAAT---taa---taaacatattgactaaaatatatggtcaatcaagtaaaatgtcatccttctgtcagt-tactgaaggtatggttgcaggctgaacctaccaagaagtaggttcagagacaaatgcctgaacgttgcctggcctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaacaaccagtactaagatttgtcctgc------gaggccaaaagtttccaattcttttcag-a---ggaaaaaaaaat------------ggtt-aaacagctgagcacctatattgagagagaatagatggaaacttgtagc----ctatgggcatcacacaaatatattattaga i nomLeu3.chr4 I 112 C 0 s rheMac8.chr18 57287944 345 + 70235451 -ccataagaat---taa---taaacatattgactaaactacatgttcaaccaggtaatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctaccaagaagtaggttcagagacaaatgcctgaacgttgcttgacctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaataaccagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcagaa---aaaaaaaaaat-------------cgtt-aaacacctgagcacctatactgagacagaatagatggaaacttgtagc----ctatgggcataacacaaatacattattaga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62979317 344 - 75711847 -ccataagaat---taa---taaacatattgactaaactacatgttcaaccaggtaatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctaccaagaagtaggttcagagacaaatgcctgaacgttacttgacctgctgctaactccctttcagggg-----------------------ttcagtcagccttgcatctacccattttaataaccagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcag-a---aaaaaaaaaat-------------cgtt-aaacacctgagcacctatactgagacagaatagatggaaacttgtagc----ctatgggcataacacaaatacattattaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13531836 344 - 18804593 -ccataagaat---taa---taaacatattgactaaactacatgttcaaccaggtaatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctaccaagaagtaggttcagagacaaatgcctgaacgttgcttgacctgctgctaactcCCTTTcagggg-----------------------ttcagtcagccttgcatctacccattttaataaccagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcag-a---aaaaaaaaaat-------------agtT-AAACACCTGAGCACCTATACTGAGACAGAATAGATGGAAACTtgtagc----ctatgggcataacacaaatacattattaga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13148855 345 + 18905526 tccataagaat---taa---taaacatattgactaaaatacatggtcaaccaggtaatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctaccaagaagtaggttcagagacaaatgcctgaacgttgcctgatctgctgctaactcCCTTTcagggg-----------------------ttcagtcagccttgcatctacccattttaacaaccagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcag-a---aaaaaaaaaat-------------agtT-AAACACCTGAGCACCTATACTGAGAGAGAATAGATGGAAACTtgtagc----ctatgggcataacacaaatacattattaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59978212 345 - 72318688 tccataagaat---taa---taaacatattgactaaactacatggtcaaccaagtaatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctaccaagaagtaggttcagagacaaatgcctgaacgttgcctgatctgctgctaactccctttcagggg-----------------------ttcagtcaaccttgcatctatccattttaacaaccagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcag-a---aaaaaaaaaat-------------agtt-aaacacctgagcacctatactgagagagaatagatggaaacttgtagc----ctatgggcataacacaaatacatcattaga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 312582 344 - 1517660 -ccataagaat---taa---taaacatattgactaaactacatggtcaaccaggtaatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctaccaagaagtaggttcagagacaaatgcctgaacgttgtttgacctgctgctaactcCCTTTcagggg-----------------------ttcagtcagccttgcatctacccattttaacaagcagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcag-a---aaaaaaaaaat-------------agtT-AAACACCTGAGCACCTATACTGAGAGAGAATAGATGGAAACTtgtagc----ctatgggcataacacaaatacattattaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3412422 344 + 6513552 tccataagaat---taa---taaacatattgactaaaatacatggtcaaccagataatatatcatccttctgtcagt-gattggaggtatggttgcaggttgaacctatcaagaagtaggttcagagacaaatgcctgaacgttgcctgacctgctgctaactcCCTTTcagggg-----------------------ttcagtcagtcttgcatctacccattttaacaaccagtactaagatttgtcctgg------gaggcaaaaagtttccaactcctttcag-a---aaaaaaaaaa--------------aaat-aAACAGCTGAGCACCCATACTGAGAGAGAATAGATGGAAACTtgtagc----ctatgggcataacacaaatacattattaga i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19385748 350 - 31320352 tccataagaat---taa---taaacatgttgactaaaatatatggtcaaccaagtaatatatcgtccttctgtcagtggattggaggtatggttgcaggctgaacctaccaagaagtaggctcagagacaattgcctgaacgttgactggcttgctgctaactcca-ttcagggg-----------------------ttcagtcagccttgtgtctacccatcttaacaatcaggactaagatttgtcctgg------agggcaaaaaggttccaattcgtttcag-gaaaaaaaaaaaaaaaaa----------agtt-aaacagctgagcacctatactgagagagaatagatgaaaacttgtagc----ctatgggcataaca-aaatacattattaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1574915 334 + 2203405 tccataagaat---taa---taaacatattgactaaaatatatggtcaaccaagtaatatatcgtccttctgtcagtggattggaggtatggttgcaggatgaacgtaccaagaagtaggttctgagaccattgc-----------ttggcatgctgcTAACTCCC-TTCAGGGG-----------------------TTCagtcagccttgtgtctacccatcttaacaaccagtacgaagatttgtcctgg------agggcaaaaa-tttccaactcctttcag-g----aaaaaaAAAAAAA----------AGTT-AAACAGCTGAGCACCTATACTGAGAGAGAATAGATGGAAACTTGTAGC----CTATGGGCATGACA-AAATATATTattaga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3531681 347 - 14941987 tccattagaat---taa---taaatttattgactaaaatatatggtcaaccaagtaacatatcatccttctgtcagtggattggaggtatggttgcaggctgaacctaccaaggagtaggttcagagacaattgcctgaatgttgcctggctcgctgctaactccc-ttcagggg-----------------------ttcagtcagccttgtgtctacccatcttaacaaccagtactaagatttgtcctgg------agggcaaaaaggttccaactcctttcag-g---aaaaaaaaaaaaaa----------agtt-aaacagctgagtacctatactgagagagaatagatggaaacttgtagc----ctatgggcataaca-aaatacattattaga i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112256979 332 - 122678785 tccaagagaattggtaa---taaacatgttaacccaaatgtctggtcaatcaggtaataaggtatcttcctacctgt-g-------------------------------agaaagtagtttctgagacagttacctgccagttgtcctacttgttgttggttccctttcgggtgaatgaaaacttcctcaccaaacttcctggtggcattgggtctatctattttaataa-cagtagtaagattcatcctagtgggtagggacggaaagcttccaa-----ttcag-g---aacaaatgaaa-------------tgtt-aaatagatgagcact----------gagaatggagggaaactcatagc--cactctgggcagtaaccaggtttgttattaga i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 418695 360 - 2150887 tcaacaggaat---tgatgttaaacgcattgaccaaactgtagggtcaagcagataattaattgtctttttgctaat-----ggagaaatggttgtgagttgag--taccatgatgtaggtccaaagacaattgcctgagtcctgtcctgcttgttgctaactctccttcaggta--tgaggatttccttgccaagttttaaatcagcctaaggtctacccattttagcaaccaggacaaagattcatcctgg------gaagcagaaaggttctaactcctttcag-t---aaaa--------------------aact-aagtagatgagcatgtatgctgagtgagaagggacagaaatttgttgtcacactatgggtataaaacaggtgagttgttgga i dasNov3.JH575754 C 0 I 1911 e calJac3.chr13 105196244 3 + 117903854 I e otoGar3.GL873546 11191271 13 - 20685099 I a score=1074427.000000 s hg38.chr18_GL383571v1_alt 2840 131 + 198278 ------------tcaattgtgaggtgagagagtg-agcggcttcacccttgttatgcttccataacatcggcaacagctgggcagtcttatagctcagccactcctgcaat-ctatgacgtcaaccttcgatcttTTTGAT-AATG s panTro5.chr18 64953518 131 + 78221452 ------------ccaattgtgaggtgagagagtg-agtggcttcacccttgttatgcttccataacattggcaacagctgggcagtcttatagctcagccactcctgcaat-ctatgacgtcaaccttcgatctttttgct-aatg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64075897 131 + 77229886 ------------ccaattgtgaggtgagagagtg-agtggcttcacccttgttatgcttccataatattggcaacagctgggcagtcttatagctcagccactcctgcaat-ctatgacgtcaaccttcgatctttttgct-aatg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5296826 131 + 17472758 ------------tcaattgtgaggtgagagagtg-agcggcttcacccttgttatgcttccataacattggcaacagctgggcagtcttatagctcagccactcctgcaat-ctatgacgtcaaccttcgatctttttgct-aatg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139332717 131 - 152096393 ------------tcaattgtgaggtgagagagtg-agcggcttcacccttgttatgcttccataacattggcaacagctgggcagtcttacagctcagccactcctgcaat-ctatgacgtcaacctttgatctttttgct-aatg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57288289 127 + 70235451 ------------tcagttgtgaggtgagagagtg-agcagcttcacccttgttatgcttccataacactggcaacagctgggcagtcttacagctcagtcactcctgcagt-ctatgatgccaacctttgatcttTTT-CT-A--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62979661 127 - 75711847 ------------tcagttgtgaggtgagagagtg-agcagcttcacccttgttatgcttccataacactggcaacagctgggcagtcttacagctcagtcactgctgcagt-ctatgatgccaacctttgatcttTTT-CT-A--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13532180 127 - 18804593 ------------tcagttgtgaggtgagagagtg-agcagcttcacccttgttatgcttccataacactggcaacagctgggcagtcttacagctcagtcactcctgcagt-ctatgatgccaacctttgatcttTTT-CT-A--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13149200 127 + 18905526 ------------tcagttgtgaggtgagagagtg-agcagcttcacccttgttatgcttccataacactggcaacagctgggcagtcttacagctcagtcactcctgcagt-ctatgatgccaacctttgatcttTTT-CT-A--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59978557 128 - 72318688 ------------tcagttgtgaggtgagagagtg-agcagcttcacccttgttatgcttccataacactggcaacagctgggcagtcttacagctcagtcactcctgcagt-ctatgatgccaacctttgatcttTTT-CTAA--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 312926 127 - 1517660 ------------tcagttgtgaggtgagagagtg-agcagcttcacccttgttatgcttccataacactggcaacagctgggcagtcttacagctcagtcactcctgcagt-ctatgatgccaacctttgatcttTTT-CT-A--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3412766 128 + 6513552 ------------tcacttatgaggtgagagagtg-agcagcttcacccttgttatgcttccgtaacattgagaacagctgggcagtcttacagctcagtcactcctgaaat-ctatgatgccaacctttgatcttTTTGCT-A--- i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19386098 131 - 31320352 ------------tcaattgcaaagtgagagtgtg-aggtgcttcacccttgttatgttttcataacattggcaagagctgagcactcttacagctcagccacttctggaat-ctatgacaccaagctttgatgtttttgct-aatg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1575249 131 + 2203405 ------------tcaattgcaaagtgagggtgtg-aggtgcttcacccttgttatgctttcataacattggcaagagctgagcagtcttacagctcagccacttctggaat-ccatgacaccaagctttgatgtttttgct-aatg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3532028 131 - 14941987 ------------tcaattgcaaagtgagagtgtg-aggtgcttcacccttgttatgctttcataacattggcaagagctcagcagtcttacagctcagccacttctggaat-ctatgacatcaagctttgatgtttttgct-aatg i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112257311 139 - 122678785 attttgggtgtttccatagagaaatgagacagtgcaggggattgatgcttgctgtg------taggaatggcaacagtgatgccatcttggagctcagcgtctcctgccatcctaccatgccaaccttggatgtactcgcc-agtt i canFam3.chr1 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e dasNov3.JH575754 419055 1911 - 2150887 I e otoGar3.GL873546 11191271 13 - 20685099 I a score=648092.000000 s hg38.chr18_GL383571v1_alt 2971 99 + 198278 ACAGTAAAAC-ATCTGAGTTGTT---TCTGTTTGTTTGT----TTGTTTTTAAGTGATTC---CTGGAAACTACCT-GTAAAC-----------------------------------------------------------------TTCAGCTTtctcaggaagatttctcaga s panTro5.chr18 64953649 98 + 78221452 acagtAAAAC-ATCTGAGTTGTT---TCTGTTTGCTTGT----TTGTTTTTAAGTGAT-C---CTGGAAACTACAT-GTGAAC-----------------------------------------------------------------CTCAGCTTtctcaggaagatttctcaga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64076028 98 + 77229886 acagtAAAAC-ATCTGAGTTGTT---TCTGTTTGTTTGT----TTGTTTTTAAGTGAT-C---CTGGAAACTACAT-GTGAAC-----------------------------------------------------------------CTCAGCTTtctcaggaagatttctcaga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5296957 96 + 17472758 acagtAAAAC-ATCTGAGTTGTT---TCTGTT---TTGG----TTGTTTTTAAGTGATTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTCAGCTTtctcaggaagatttctcaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139332848 99 - 152096393 acagtAAAAC-ATCTGAGTTGTT---TTTCTTTGTTCGT----TTGCTTTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTTCTCAGAAAGATTTCTCAGA i nomLeu3.chr4 C 0 I 312 s rheMac8.chr18 57288416 87 + 70235451 -----AAAAA-ATCTGAGTTGTT---TTTGT----TTGT----TTGTTTTTAAGCGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTTCTC---Aagatttctcaga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62979788 87 - 75711847 -----AAAAA-ATCTGAGTTGTT---TTTGT----TTGT----TTGTTTTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTTCTC---Aagatttctcaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13532307 87 - 18804593 -----AAAAA-ATCTGAGTTGTT---TTTGT----TTGT----TTGTTTTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTTCTC---Aagatttctcaga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13149327 90 + 18905526 -----AAAAA-ATCTGAGTTGTT---TTTGT----TTGT----TTGTTTTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTtctcaagaagatttctcaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59978685 90 - 72318688 -----AAAAA-ATCTGAGTTGTT---TTTGT----CTGT----TTGTTTTTAAGTGAGTC---CTGGAAACTATAT-GTAAAC-----------------------------------------------------------------TTTAGCTTtctcaagaagatttctcaga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 313053 87 - 1517660 -----AAAAA-ATCTGAGTTGTT---TTTGT----TTGT----TTGTTTTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTTCTC---Aagatttctcaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3412894 86 + 6513552 -----AAAAACATCTGAGTTGTT---TTTG-------------TTGTTTTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTTAGCTTtctcaagaagatttctcaga i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19386229 102 - 31320352 acagtAAAAA-ACCTGAGTTGTtttgtttgtttgtttgt----ttgcttTTAAGTGAGCA---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------TTCAGCTTtctcaggaaggtttctcaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1575380 106 + 2203405 acagtAAAAA-ACCTGAGttgttttgtttgtttgtttgtttgcttgcttTTAAGCGAGTC---CTGGAAACCACAT-GTAAAC-----------------------------------------------------------------TTCAGCTTTTTCAGGAAGGTTTCTCAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3532159 102 - 14941987 acagtAAAAC-ACCTGAGttgttttgtttgtttgtttgt----ttgcttTTAAGTGAGTC---CTGGAAACTACAT-GTAAAC-----------------------------------------------------------------CTCAGCTTtctcaggaaggtttctcaga i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11191284 65 - 20685099 ACAATAAAAT-GTCTCAGTT------TTTGT-------T----TTAAACTAAAATGACTC---TTGGG---TAGATAGGAAAA-----------------------------------------------------------------TGGAGC---------------------- i otoGar3.GL873546 I 13 C 0 s canFam3.chr1 112257450 153 - 122678785 acagtaaaat-atctcagacttt------------tttt----tttttttgaaacgagtctctcagaagatttccc-agaaacacacagatttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctt-----tatttttaaca i canFam3.chr1 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e dasNov3.JH575754 419055 1911 - 2150887 I a score=4730378.000000 s hg38.chr18_GL383571v1_alt 3070 519 + 198278 aacagattaattcccatgtaaagtcgt---tgatgatgcattgagtagtgtactggcatttagtgccctagatggtgtttacagtgctgatgaaggtggaccattagcaaatgaaacatgaaaccCCCAAAATa----taaatttttgcagtcaacctgattactcggggaaacttaccttgcacttaaattgaaaccaggcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------taaggtgggctcccccaagaagttggtgagagccaagctcacagtggccagaaagagcaaaccctctaatactaga-aagaaagcgctatgtctttggctggaacagctgggtaaagagactcctgagggaaaaatacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatgtatat------------------------------ctttgggtgcaac----ac---atgcatttgaatattgcttggttgaactgcaagcagacatcttgctgctaacaaatgaaagt-aaatctgtgtag s panTro5.chr18 64953747 519 + 78221452 aacagattaattcccatgtaaagtcgt---tgatgatgcattgagtagtgtactggcatttagtgccctagatggtgtttacagtgctgatgaaggtggaccattagcaaatgaaacatgaaaccCCCAAAATa----taaatttttgcagtcaacctgattacttggggaaacttaccttgcacttaaattgaaaccgggcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------taaggtgggctcccccaagaagttggtgagagccaagctcacagtggccagaaagagcaaaccctctaatcctaga-aagaaagcactatgtctttggctgagacagctgggtaaagagactcctgagggaaaaatacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac----ac---atgcatttgaatattgcttggttgaactgcaagcagacatcttactgctaacaaatgaaagt-aaatccatgtag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64076126 519 + 77229886 aacagattaattcccatgtaaagtcgt---tgatgatgcattgagtagtgtactggcatttagtgccctagatggtgtttacagtgctgatgaaggtggaccattagcaaatgaaacatgaaaccCCCAAAATa----taaatttttgcagtcaacctgattacttggggaaacttaccttgcacttaaattgaaaccgggcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------taaggtgggctcccccaagaagttggtgagagccaagctcacagtggccagaaagagcaaaccctctaatcctaga-aagaaagcactatgtctttggctgagacagctgggtaaagagactcctgagggaaaaatacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac----ac---atgcatttgaatattgcttggttgaactgcaagcagacatcttactgctaacaaatgaaagt-aaatccatgtag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5297053 519 + 17472758 aacagattaattcccatgtaaagtcgt---tgatgatgcattgagtagtgtactggcagttagtgccctagatggtgtttgcagtgctgatgaaggtggaccattagcaaatgaaacatgaaaccCCCAAAATa----taaatttttgcagtcaacctgattactcggggaaacttaccttgcacttaaattgaaaccaggcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------tcaggtgggctcccccaagaagttggtgagagccaagctcacagtcgccagaaagagcaaaccctctaatactaga-aagaaagcgctatgtctttggctgggacagctgggtaaagagactcctgagggaaaaatacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatgtatat------------------------------ctttgggtgcaac----ac---atgcatttgaatattgcttggttgaactgcaagcagacatcttgctgctaacaaatgaaagt-aaatctgtgtag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139333259 522 - 152096393 CACAGATTAATTCCCATGTAAAGTCAC---TGATGATGCATTGAGTAGTgtactggcatttagtgccctagatggtgtttacaatggtgatgaaggtggaccactggcaaatgaaacatgaaacccccaaaatataggtaaatttttgcagtcaacctgattactcgaggaaacttaccttgtacttaaattgaaaccaagcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcatat-------gaaggcgggctcccccgagaacttggtgagagccaagctcacagtggccaaaaaaagcaacccctctaatcctata-aggaaagcactatgtgtttggctgatacagctggataa--agactcccaaggggtaaatacaca--atgtctatgaatgatgacatcgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac----aa---atgcatttgaatattgcttggttgaactgcaagcagacaccttgctgctaacaaatgaaagt-aaatccatgtag i nomLeu3.chr4 I 312 C 0 s rheMac8.chr18 57288503 519 + 70235451 aacagattaattcccaggtaaagtcat---ggatgatgcattgagtagtgtactggcattcagtgccctagatggtgtttacaatgcagatgaaggtggaccattggcaaataaaatatgaaacccccaaaat----ataaatttttgcagtcaacctgattactcagggaaacttcccttgtacttaaattgaaaccaagcatgaa-ttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------tagggtgggctcccccaagaatttggtgagagccaagctcacagtgaccagaaagagcaaaccctgtaatcctaga-agtaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaacacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac---aac---atttgggtgaatattgtttgattgaactgcaagcagacaccttgctattaataaatgaaagt-aaatccatgtag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62979875 523 - 75711847 aacagattaattcccaggtaaagtcat---ggatgatgcattgagtagtgtactggcattcagtgccctagatggtgtttacaatgcagatgaaggtggaccattggcaaataaaatatgaaacccccaaaatatagataaatttttgcagtcaacctgattactcagggaaacttcccttgtacttaaattgaaaccaagcatgaa-ttatgagatatcatcaagctaatggag-agcaaatgc--ttcagat-------tagggtgggctcccccaagaatttggtgagagccaagctcacagtgaccagaaagagcaaaccctgtaatcctaga-agtaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaacacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac---aac---atttgggtgaatattgtttgattgaactgcaagcagacaccttgctattaataaatgaaagt-aaatccatgtag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13532394 523 - 18804593 aacagattaattcccaggtaaagtcat---ggatgatgcattgagtagtgtactggcattcagtgccctagatggtgtttacaatgcagatgaaggtggaccattggcaaataaaatatgaaacccccaaaatatagataaatttttgcagtcaacctgattactcagggaaacttcccttgtacttaaattgaaaccaagcatgaa-ttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------tagggtgggctcccccaagaatttggtgagagccaagctcacagtgaccagaaagagcaaaccctgtaatcctaga-agtaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaacacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac---aac---atttgggtgaatattgtttgattgaactgcaagcagacaccttgctattaataaatgaaagt-aaatccatgtag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13149417 524 + 18905526 aacagattaactcccatgtaaagtcat---tgatgatgcactgagtagtgtactggcattcagtgccctagatggtatttacaatgcagatgatggtggaccattggcaaatgaaatatgaaaccccaaaaatatagataaatttttgcagtcaacctgattactcggggaaacttcccttgtacttaaattgaaaccaagcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------tagggtgggctcccccaagaacttggtgagagccaagctcacagttgccagaaagagcaaaccctgtaatcctaga-aggaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaacacaca--atgtcta-gaatgatgaccttgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac---aac---atttgggtgaatattgtttgactgaactgcaagcagacacctcgctactaataaatgaaagt-aaatccatgtag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59978775 526 - 72318688 aacagattaactcccatgtaaagtcat---tgatgatgcactgagtagtgtactggcattcagtgccctagatggtgtttacaatgcagatgaaggtggaccattggcaaatgaaatacgaaaccccaaaaatatagataaatatttgcagtcaacctgattacttggggaaacttcccttgtacttaaattgaaaccaagcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------tagggtgggctcccccaagaacttggtgagagccaagctcacagttgccagaaagagcaaaccctgtaatcctaga-aggaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaacacaca--atgtcta-gaatgatgacattgccacctacctccccattatatatatat------------------------------ctttgggtgcaac---aac---atttgggtgaatattgtctgattgaactgcaagcagacacctcgctactaataaatgaaagt-aaatccatgtag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 313140 522 - 1517660 aacagattaattcccaggtaaagtcat---ggatgatgcattgagtagtgcactggcattcagtgccctagatggtgtttacaatgcagatgaaggtggaccatt-gccaataaaatatgaaacccccaaaatatagataaatttttgcagtcaacctgattactcagggaaacttcccttgtacttaaattgaaaccaagcatgaa-ttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------tagggtgggctcccccaagaacttggtgagagccaagctcacagtgacctgaaagagcaaaccctgtaatcctaga-agtaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaacacaca--atgtcta-gaatgatgacattgccacctacctccccat--tatatatat------------------------------ctttgggtgcaac---aac---atttgggtgaatattgtttgattgaactgcaagcagacaccttgctattaataaatgaaagt-aaatccatgtag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3412980 526 + 6513552 aacagattaattcccatgtaaagtcat---tgatgatgcattgagtggtgtactggaattcagtgccctagatggtgttaacaatgcagatgaaggcggaccactggcaaatgaaatatgaaacccctaaaatatagataaatttttgcagtcaacctgattactcggggaaacttcccttgtacctaaattgaaaccaagcatgaatttatgagatatcatcaagctaatggag-agcaaatgc--ctcagat-------gagggtgggct-ccccaagaacttggtgagagccaagctcacagtggccagaaagagcaaaccttgtaatcctaga-aggaaagcactatgtctttggctgagacagctgggtaaagagactcctgaggggtaaatacaca--atgtcta-gaatgatgacattgccacctacatccccat--tatacatat------------------------------ctttgggtgcaac---aacaatatttgggtgaatattgtttgattgaactgtaagcagacaccttgctactaataaatgaaagt-aaatccatgtag i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19386331 546 - 31320352 aacagatgaattcccgtgtaaagtcat---tgatgatgcattgactagtatactggcatttagtggcctagattgtgtttacaaggctgatgaaggtggaccattggc-------aaatgaaaccccacagatatagataaatgtttacagtcaatctgattactctgggaaacttcccttgtacttaacttgacaccaagcatgaatttatgagatatcattaagctaatggagcaacgaatgcctctcagat-------taaggtgggctcccccaagaacttagcgaaagccaagctcacagtggccagaaagagcaaaccctgtaatcctaga-aggagggcactgtgcctttggttgtgacaggtgggtaaagagatgcctgaggggtaaatgcaca--atgtctt-gaatgatgacattgccacctacctccccca--tatatatatgtacacacacac----acatatgtgtgtacctttgggtgcaac----aa---aagcatttgaatattgttttgttcaactgcaagcagacaacctgctgatagtaaatgaaagtaaaatccacatat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1575486 556 + 2203405 AACAGATGAATTCCCATGTAAAGTCAG---TGATGATGCATTGACTAGTATACTGGCATTTCGTGCCCTAGATTGTGTTTACAAGGCTGATGAAGGTGGACCATTGGCAAATGAAAAATGAAACCCCACAGATATAGATAAATGTTTATAGTCAATCTGATTACTCTGGGAAGCTTCCCTTGTACTTAGCTTGAAACCGAGCATGCATTTATGAGATATCATTAAGCTAATGGAGCAACAAATGCCTCTCAGAT-------TAAGGTCGGCTCCCCCAAGAACTTAGTGAGAGCCAAGCTCACAGTGGCCAGAAAGAGCAAACCCTGTAATCCTAGA-AGGATAGCACTGTGTCTTTGGCTGTGACAGCTGGGTAAAGAGATGCCTAAGGGGTAAATGCACA--ATGTCTA-GAATGATGACATTGCCACCTACCTCCCACa--tatatatatgtacacacacacatatatatatGTGTGTACctttgggtgcaac----aa---aagcatttgaatactgtctggttgaactgcaagcagacaacttgctgataataaatgaaagt-aaatccacatat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3532261 552 - 14941987 aacagatgaattcccgtgtaaagtcat---tgatgatgcattgaccagtatactggcatttagtgtcccagattgtgtttacaaggctgatgaaggtggaccattggcaaatgaaaaatggaaccccacagatatagataaatgtttacagtcaatctgattactctgggaaacttcccttgaacttaacttgaaaccaagcatgaatttatgagatatcattaagctaatggagcaacaaatgcctctcagat-------taaggtatgctcccccaggaacttagtgagagtcaagctcacagtggccagaaagagcaaaccctgtaatcctaga-aggagagcactgtgtctttgactgtgacagctgggtaaagagatgcctgaggggtaaatgcaca--atgtcta-gaatgatgacattgccacctacctccccca--tatatgtgtgtgtgtgtgtgt----gtgtgtgtgtgtacctttgggtgcaac----ag---aagcatttgaatattgtttggttgaactgcaagcagacaacttgctgataataaatgaaagt-aaatccacatat i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11191349 508 - 20685099 AACAGTCTGATTCCCATG---ATTTGT---TGCtgaagcactgagaagtatcctggctttgaccaccctagatagtgtctatgatagtgatgaagttgaacccttggcaggtaaaaaactaagttccccaaatatgga-aaattctctctgtcgaccccatcactctagtaagcctgtctatcccttaaactgaaaccaagcctggattcatgag-tgacaacaggctaatgggc-agca------------at-------taagatgggcttcccaaggaacatggtgagagcacagctcaccaaggccagagacggcaaaccttgtggtcctcaa-gggaaagcactgtgtctctg-ctgtggctactgagtaagcttgttgccaaaggtgaagcagatg--ttgttcg-gaatcatgacatttccatccacctacccaa--tatgtgg--------------------------------ctttgtatacaatgaaaga---atgatgaggaatactatttggttaagctagatgcagctaccatattgcta-ccaatgaaagc-aaatcaatgctg i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112257603 522 - 122678785 cacag----atttctatgtacaaccatctgtgactagccattgactggcat-ttgagcttcagtgcggtggactgtgtttacaaggctgacaaaggtgagccactggcaattaagaaactagattccaaaaatatagataaattcttgctgttgatttgatgcctctgggtaattccctcaactcttaaattgaatccaggcatatatttaagaggtgttatcatgctgatgagacagcagatgc--ttcagattgtgtgctaatggaagctccccaaagaacaagctgagagtca--ctctgaatatctagagggaaagaactccaaggtcctagaggggaaagtgctgtgtctttgtct-----tgttgagtcaaggggctcctaaaggtaaaaaacacaggatgtctg-gaatggccacgttaccaaccaactactcaa--tatatgg--------------------------------ctttggaagaaac----aa---aagcattagaaagttac-tggctaaactgcaagcaaccaccatgctgctaaggattagaagt-gagtcagggctg i canFam3.chr1 C 0 C 0 e calJac3.chr13 105196244 3 + 117903854 I e dasNov3.JH575754 419055 1911 - 2150887 I a score=1313330.000000 s hg38.chr18_GL383571v1_alt 3589 119 + 198278 ctcactagacagagatgctctctccttctct--gccc-taaccccttcctccttctgcattcctacctcagcaac-ttaa---aggggctagatgattaaagatggatctaagatctcactgtgcc s panTro5.chr18 64954266 120 + 78221452 ctcactagacagagatgctctctccttctct--gcccctaaccccttcctccttctgcattcctacctcagcaac-ttaa---aggggctagatgattaaagatggatctaagatctcactgtgcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64076645 120 + 77229886 ctcactagacagagatgctctctccttctct--gcccctaaccccttcctccttctgcattcctacctcagcaac-ttaa---aggggctagatgattaaagatggatctaagatctcactgtgcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5297572 120 + 17472758 ctcactagacagagatgctctctccttctct--gcccctaaccccttcctccttctgcattcctacctcagcaac-ttaa---aggggctagatgattaaagatggatctaagatctcactgtgcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139333781 120 - 152096393 ctcactagacagagatgctctctccttctcc--gcccctaaccccttcctccttctgcattcctaccccagcaac-tgaa---aggggctagacgattagagatagatctaaggtctcactgtgcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57289022 120 + 70235451 cttactagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaa---aggggcaagatgattaaagatggatctaaggtctcactgtgcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62980398 120 - 75711847 cttactagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaa---aggggcaagatgattaaagatggatctaaggtctcactgtgcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13532917 120 - 18804593 cttactagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaa---aggggcaagatgattaaagatggatctaaggtctcactgtgcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13149941 120 + 18905526 cttaccagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaa---aggggctagatgattaaaaatggatctaaggtctcaccgtgcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59979301 120 - 72318688 cttaccagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaa---aggggctagatgattaaaaatggatctaaggtctcactgtgcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 313662 120 - 1517660 cttactagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaa---aggggcaagatgattaaagatggatctaaggtctcactgtgcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3413506 123 + 6513552 cttattagacagagatgctctctccttctct--gcccttaaccccttcctccttcttcattcctacctcagcaac-ttaaatgatgagcgagatgattaaagatggatctaaggtctcactgtgct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196247 119 + 117903854 ctcactagacagagatgctctctcctcttct--gccc-caaccccttcctccttctgcattcctacctcagaaac-ttaa---aggagatagatgattaaagatggatccgaagtctctctgtgcc i calJac3.chr13 I 3 C 0 s saiBol1.JH378121 19386877 119 - 31320352 ctcactagacaaagatgctctctcctcttct--gccc-caaccccttcctccttctgcatttctgcctcagaaac-ttaa---aggggatagatgattaaagatgtatctaaagtctctctgtgcc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576042 119 + 2203405 ctcagtagacagagatgctctctcctcttct--gccc-caaccccttcctccttctgcattcctaccacagaaac-ttac---aggggatagatgattaaagatggatctaaagtctctctgtgcc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3532813 119 - 14941987 ctcactagacagagatgctctctcctcttct--gccc-caaccccttcctccttctgcatttctacctcagaaac-ttca---aggggatagatgattaaagatggatctaaagtctctctgtgcc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11191857 122 - 20685099 ctcactggacagagctgctctctctccctccaggccacatggctctcccttctcccacactcctacctcagccaa-ataa---agggcagagatggtgacaagtgggtcaagaatttctctgggtc i otoGar3.GL873546 C 0 I 104 s canFam3.chr1 112258125 115 - 122678785 ctcactgagcagacctgctctctcct--tct--gtccagtatactgtcctccctctgca---ctacctcagctgctttca---gggggaaagataattgaaggtgattctaaggtccc-ccgtgtt i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 419055 1911 - 2150887 I a score=131858.000000 s hg38.chr18_GL383571v1_alt 3708 12 + 198278 aaccaggaacta s panTro5.chr18 64954386 12 + 78221452 aaccaggaacta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64076765 12 + 77229886 aaccaggaacta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5297692 12 + 17472758 aaccaggaacta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139333901 12 - 152096393 acctaggaacta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57289142 12 + 70235451 aactaggaacta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62980518 12 - 75711847 aactaggaacta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13533037 12 - 18804593 aactaggaacta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13150061 12 + 18905526 aactaggaacta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59979421 12 - 72318688 aactaggaacta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 313782 12 - 1517660 aactaggaacta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3413629 12 + 6513552 aactaggaacca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196366 12 + 117903854 aaccaggaacta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19386996 12 - 31320352 aaccaggaacta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576161 12 + 2203405 aaccaggaacta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3532932 12 - 14941987 aaccaggaacta i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11192083 12 - 20685099 aaccaaaaaata i otoGar3.GL873546 I 104 I 193 s canFam3.chr1 112258240 12 - 122678785 cctgagggattg i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 419055 1911 - 2150887 I a score=1475628.000000 s hg38.chr18_GL383571v1_alt 3720 141 + 198278 aaggtcatatacttctgtcccctgagc----tgggttatctaagaggggggaagaaatgaaacctttacggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatctttctacttggtgtcattggggctgagatcacatgcattcagttt s panTro5.chr18 64954398 141 + 78221452 aaggtcatatacttctgtcccctgagc----tggggtatctaagaggggggaagaactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattctacttggtgtcattggggctgagatcacatgcattcagttt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64076777 141 + 77229886 aaggtcatatacttctgtcccctgagc----tggggtatctaagaggggggaagaactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattctacttggtgtcattggggctgagatcacatgcattcagttt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5297704 141 + 17472758 aaggtcatatacttctgtcccctgagc----tggggtatctaagaggggggaagaaatgaaacctttacggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattctacttggtgtcattggggctgagatcacatgcattcagttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139333913 141 - 152096393 aaggtcatatacttctgtcccctgagc----tggggtatctaagaggggggaagaactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattctacttggtgtcattggggctgagatcacatgcatccagttt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57289154 141 + 70235451 aaggtcgtatacttctgtcccctgagc----tggggtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggggctgaaatcacatgcatccagttt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62980530 141 - 75711847 aaggtcgtatacttctgtcccctgagc----tggggtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggggctgaaatcacatgcatccagttt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13533049 141 - 18804593 aaggtcgtatacttctgtcccctgagc----tggagtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggggctgaaatcacatgcatccagttt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13150073 141 + 18905526 aaggtcatgtacttctgtcccctgagc----tggggtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggagctgaaatcacatgcatccagttt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59979433 141 - 72318688 aaggtcatgtacttctgtcccctgagc----tggggtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggggctgaaattacatgcatccagttt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 313794 141 - 1517660 aaggtcgtatacttctgtcccctgagc----tggggtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggggctgaaatcacatgcatccagttt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3413641 141 + 6513552 aaggtcatatacttctgtcccctgagc----tggggtatctaagaggagggaataactgaaacctttatggctttgttg-------------------------------------gttccaca--tgtac---------------aagtcatcattttacttggtgtcattggggctgaaatcacatgcatccagttt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196378 158 + 117903854 aaaatcatatacttctgtaccctgagc----tggcatatctaagaggggcaaagaactgacacctttatggttttcttg-------------------------------------gtttcaccattatacttggtttcattggggctgtcatcattatacccggtctcattggggctgagatctcatgcaatccgtcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387008 141 - 31320352 aaggtcatatacttcagtaacctgagc----tggggtatctaagaggggtgaagaactgacacttatatggttttcttg-------------------------------------gtttcaca--tgtac---------------cagtcatcattctacttggtctcattggggctgagatctcatgcaattcatct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576173 178 + 2203405 aaggtcatatacttctgtaacctgagc----tggggtatctaagaggggtgaagaactgacacctttacggttttcttgtaccagtcatcattctatttggtctcatgtaccagtcatttcaca--tgtac---------------aggtcatcattctacttggtctcattggggctgagatctcatgcaattcgtca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3532944 145 - 14941987 aaggtcatatactactgtaccctgagcttagttaggtatctaagaggggcgaagaactgacatctttacggttttcttg-------------------------------------gtttcaca--tgtac---------------cagtcatcattctacttggtctcattggggctgagatctcatgcaatctatct i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11192288 140 - 20685099 aaggccacatacttctgtcccctaagc----tgagccacccaggaag-gggaagaactcaaacttttatagatttgttg-------------------------------------gattcagg--tatac---------------agatcatcatcttatacagttctgttgggtgtgaggtcacccacattcacatt i otoGar3.GL873546 I 193 C 0 s canFam3.chr1 112258252 141 - 122678785 aaggctatacacatccatcccctaaac----tagggtaattagatgtggggaagagctgaatcttttgtggatttattg-------------------------------------gaaacagg--tatat---------------gattcatcatcctccctgatcctgtttgaagtgagatgactcacatttagttt i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 419055 1911 - 2150887 I a score=2018518.000000 s hg38.chr18_GL383571v1_alt 3861 176 + 198278 actagag-ctggcagtcttcacgat-gaggac-agaatccaatatgaccttttggatgcaactcttcaggctgattcaatgta--gttttggcttctacatgtaaatatatag-----------------------taggaattgaagcattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTG s panTro5.chr18 64954539 176 + 78221452 actagag-ctggcagtcttcacgat-gaggac-agaatccaatatgaccttttggatgcaactcttcaggctgattcaatgta--gttttggcttctacatgtaaatatatag-----------------------taggaattgaagcattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64076918 176 + 77229886 actagag-ctggcagtcttcacgat-gaggac-agaatccaatatgaccttttggatgcaactcttcaggctgattcaatgta--gttttggcttctacatgtaaatatatag-----------------------taggaattgaagcattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5297845 176 + 17472758 actagag-ctggcagtcttcacgat-gaggac-agaatccaatatgaccttttggatgcaactcttcaggctgattcaatgta--gttttggcttctacatgtaaatatatag-----------------------taggaattgaagcattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334054 176 - 152096393 actagag-ctggcaatcttcacgat-gaggat-ggaacccaatatgaccccttgggtgcaaatcttcaggctgattcaatgta--gtttttgcttctacatgtaaatacatag-----------------------taggaattgaagcattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAGTAGATTTTGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57289295 176 + 70235451 actagag-ctggcagtcttcgcaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcaatgta--gtttttgcttccacatgtaaatatatag-----------------------taggaattgaagtattatgggcttgtacttctgcatctcataGTTTGGATAAAATAATAGATTTTGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62980671 176 - 75711847 actagag-ctggcagtcttcacaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcaatgta--gtttttgcttccacatgtaaatatatag-----------------------taggaattgaagtattatgggcttgtacttctgcatctcatagtttggatgaaatAATAGATTTTGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13533190 176 - 18804593 actagag-ctggcagtcttcacaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcaatgta--gtttttgcttccacatgtaaatatatag-----------------------taggaattgaagtattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13150214 176 + 18905526 actagag-ctggcagtcttcacaat-gaagat-ggaactcaatatgaccttttgggtgcaactcttcaggctgattcaatgta--gtttttgcttctatatgtaaatatatag-----------------------taggaattgaagtagtatgggcttctacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59979574 176 - 72318688 actagag-ctggcagtcttcacaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcaatgta--gtttttgcttctatatgtaagtatatag-----------------------taggaattgaagtattatgggcttctacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 313935 176 - 1517660 actagag-ctggcagtcttcacaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcaatgta--gtttttgcttctatatgtaaatatatag-----------------------taggaattgaagtattatgggcttgtacttctgcatctcataGTTTGGATAAAAGAATAGATTTTGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3413782 176 + 6513552 actagag-ctggcagtcttcacaat-gaggat-ggaacccaatatgaccttttgggtgcaactcctcaggctgattcaatgta--gtttttgcttctacatgtaaatatatag-----------------------gaggaattgaagtattatgggcttgtacttctgcatctcataGTTTGGATAGAAGAATAGATTTTGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196536 155 + 117903854 actagag-ttggcagtctttgcatt-gaggat-ggaacccaacatgaccttttgggtgcaacttttcaggctgattcagtgta--gtttttgcttctacatgtaaatatacag-----------------------taagaattgaagcattatgtgcttgtactt---------------------AAAGAGTAGATTTTGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387149 176 - 31320352 actagag-ttggcagtcttcgcagt-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcagtgta--gtttttgcttctacatgtaaatatatag-----------------------taggcattgaagcatgatgtgcttgcacttctgcatctcataaTTTGTATAAAAGAGTAGATTTTGTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576351 176 + 2203405 actagag-ctggcagtcttcgcaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcagtgta--gtttttgcttctacatgtaaatatatag-----------------------taggaattgaagcattatgtgcttctacttctgcatctcataaTATGGATAAAAGAGTAGATTTTGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533089 176 - 14941987 actagag-ctggcagttttcgcaat-gaggat-ggaacccaatatgaccttttgggtgcaactcttcaggctgattcagtgta--attttttcttctacatgtaaatatatag-----------------------taggaattgcagcattatgtgcttgtacttctgcatctcataaTTTGGATAAAAGAGTAGATTTTGTG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11192428 189 - 20685099 actagtgtttggaagttttcgcaatagatgaa-ggcagctaacacgatttttttagtgcaacttgttggccctactcaatgta---cagttgtttcctcatctaaatatatagATATCTAAATCATCTAAATATAATAGGAATTGATG-----------TTTACTACCCCATTTAATAAGCTGGAtgtaagaacagatgttgtg i otoGar3.GL873546 C 0 I 122 s canFam3.chr1 112258393 143 - 122678785 actagggtttggcagttaacacaat-ggggaagggaagccaacatgac-------------------------------------agtattgcttctacgtataaaagtagag-----------------------caggaattgatacattctgtgcttatacttcctcatcccataagtTAAATGTAAGACTATGTATTGTG i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 420966 177 - 2150887 accaaaa-caGgcaggtttcacagt-gggaaagggaatccaatgtcacctggtaggtgcaacactttgaagcaattcaatgtacagattttgcttctacat-taaatgcacag-----------------------tac-aatttatgtgttatatgcttatatttctccatcccataagtTAGATGTAAAAATAGATTTTGTA i dasNov3.JH575754 I 1911 C 0 a score=17037.000000 s hg38.chr18_GL383571v1_alt 4037 2 + 198278 TT s panTro5.chr18 64954715 2 + 78221452 TT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077094 2 + 77229886 TT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298021 2 + 17472758 TT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334230 2 - 152096393 TT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57289471 2 + 70235451 TT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62980847 2 - 75711847 TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13533366 2 - 18804593 TT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13150390 2 + 18905526 TT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59979750 2 - 72318688 TT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 314111 2 - 1517660 TT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3413958 2 + 6513552 TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196691 2 + 117903854 TT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387325 2 - 31320352 TC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576527 2 + 2203405 TT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533265 2 - 14941987 TT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112258537 1 - 122678785 T- i canFam3.chr1 I 1 I 55 s dasNov3.JH575754 421143 2 - 2150887 TT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11192617 122 - 20685099 I a score=164455.000000 s hg38.chr18_GL383571v1_alt 4039 16 + 198278 CTATA-ATCATTCTATT s panTro5.chr18 64954717 16 + 78221452 CTATA-ATCATTCTATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077096 16 + 77229886 CTATA-ATCATTCTATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298023 16 + 17472758 CTATA-ATCATTCTATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334232 16 - 152096393 CTGTA-ATCATTCTATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57289473 16 + 70235451 ATGTA-ATCATTCTATT i rheMac8.chr18 C 0 I 1124 s macFas5.chr18 62980849 16 - 75711847 ATGTA-ATCATTCTATT i macFas5.chr18 C 0 I 1122 s macNem1.NW_012016688v1 13533368 16 - 18804593 ATGTA-ATCATTCTATT i macNem1.NW_012016688v1 C 0 I 1124 s cerAty1.NW_012001075v1 13150392 16 + 18905526 ATATA-ATCATTCTATT i cerAty1.NW_012001075v1 C 0 I 1123 s chlSab2.chr18 59979752 16 - 72318688 ATATA-ATCATTCTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 314113 16 - 1517660 ATGTA-ATCATTCTATT i manLeu1.NW_012106698v1 C 0 I 1123 s colAng1.NW_012115433v1 3413960 16 + 6513552 ATGCA-ATCATTCTATT i colAng1.NW_012115433v1 C 0 I 1120 s calJac3.chr13 105196693 16 + 117903854 CTGTA-ATCGTTCTATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387327 16 - 31320352 CTGTA-ATCGTTCTATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576529 16 + 2203405 CTGTA-ATCGTTCTATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533267 16 - 14941987 CTGTA-ATCATTCTATT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 421145 17 - 2150887 CTATATATCATTCTATT i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112258538 55 - 122678785 I e otoGar3.GL873546 11192617 122 - 20685099 I a score=36256.000000 s hg38.chr18_GL383571v1_alt 4055 3 + 198278 ACA s panTro5.chr18 64954733 3 + 78221452 ACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077112 3 + 77229886 ACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298039 3 + 17472758 ACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334248 3 - 152096393 ACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57290613 3 + 70235451 ACA i rheMac8.chr18 I 1124 C 0 s macFas5.chr18 62981987 3 - 75711847 ACA i macFas5.chr18 I 1122 C 0 s macNem1.NW_012016688v1 13534508 3 - 18804593 ACA i macNem1.NW_012016688v1 I 1124 C 0 s cerAty1.NW_012001075v1 13151531 3 + 18905526 ACA i cerAty1.NW_012001075v1 I 1123 C 0 s chlSab2.chr18 59979768 3 - 72318688 ACA i chlSab2.chr18 C 0 I 1124 s manLeu1.NW_012106698v1 315252 3 - 1517660 ACA i manLeu1.NW_012106698v1 I 1123 C 0 s colAng1.NW_012115433v1 3415096 3 + 6513552 ACA i colAng1.NW_012115433v1 I 1120 C 0 s calJac3.chr13 105196709 3 + 117903854 ACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387343 3 - 31320352 ACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576545 3 + 2203405 ACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533283 3 - 14941987 ACA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 421162 3 - 2150887 ATA i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112258538 55 - 122678785 I e otoGar3.GL873546 11192617 122 - 20685099 I a score=469774.000000 s hg38.chr18_GL383571v1_alt 4058 52 + 198278 TTATGCTAACAAAAACCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT s panTro5.chr18 64954736 52 + 78221452 TTATGCTAACAAAAACCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077115 52 + 77229886 TTATGCTAACAAAAACCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298042 52 + 17472758 TTATGCTAACAAAAACCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334251 51 - 152096393 TT-TGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTCCTAATGAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57290616 52 + 70235451 TTGTGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62981990 52 - 75711847 TTGTGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13534511 52 - 18804593 TTGTGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13151534 52 + 18905526 TTATGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59980895 52 - 72318688 TTATGCTAATAAAAGCCATTTGTCCAGGAAAGCTCTCCCTTTCCTGATGAAT i chlSab2.chr18 I 1124 C 0 s manLeu1.NW_012106698v1 315255 52 - 1517660 TTATGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTTCTGATGAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3415099 52 + 6513552 TTATGCTAATAAAAGCCATTTGTCCAGGAAAGGTCTCCCTTTCCTGATGAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196712 48 + 117903854 TTATGCTAATAAAAGCCATTCGTCCAGGAAAAGT----CTTTCCTGGTGAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387346 48 - 31320352 TTATGCTAATAAAAGCCATTCACCCAGGAAAAGT----CTTTCCTGGTGAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576548 46 + 2203405 TTATGCTAATAAAAGCCATTCGTCCAGG--AAGT----CTTTCCTGGTGAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533286 48 - 14941987 TTATGCTAATAAAAGCCATTCGTGCAGGAAAAGT----CTTTCCTGGTGAAT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 421165 18 - 2150887 -----GTAATAAAAGCCATTCTT----------------------------- i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112258538 55 - 122678785 I e otoGar3.GL873546 11192617 122 - 20685099 I a score=1321423.000000 s hg38.chr18_GL383571v1_alt 4110 141 + 198278 TATACAGATATGGATATAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAAAA--TACATTACATATGTTCTCCAACCC----AGTAAAAGATCAGCCTCAAAATGGAAAAGGAACAAT- s panTro5.chr18 64954788 140 + 78221452 TATACAGATATGGATATAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAAA---TACATTACATATGTTCTCCAACCC----AGTAAAAGATCAGTCTCAAAATGGGAAAGGAACAAT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077167 140 + 77229886 TATACAGATATGGATATAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAAA---TACATTACATATGTTCTCCAACCC----AGTAAAAGATCAGTCTCAAAATGGAAAAGGAACAAT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298094 141 + 17472758 TATACAGATATGGATATAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAAAA--TACATTACATATGTTCTCCAACCC----AGTAAAAGATCAGCCTCAAAATGGAAAAGGAACAAT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334302 137 - 152096393 GATATAGATATGGATATAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAAA---TA---TACATATGTTCTCCAACCC----AATAAAAGATCAGTCTTAAAATGGAAATGGAACAAT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57290668 136 + 70235451 GATACAGATATAGATGTAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAA----TA---TTCGTATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62982042 136 - 75711847 GATACAGATATAGATGTAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAA----TA---TTCGTATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13534563 136 - 18804593 GATACAGATATAGATGTAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAA----TA---TTCGTATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13151586 136 + 18905526 GATACAGATATAGATGTAGATATATTCTCCAACCTAATAGAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAA----AA---TTCCTATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59980947 136 - 72318688 GATACAGATATAGATGTAGATATATTCTCCAACCTAATAGAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAA----TA---TTCATATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 315307 137 - 1517660 GATACAGATATAGATGTAGATATATTCTCCAACCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGGAAAAAAA----TA---TTCATATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3415151 136 + 6513552 GATACAGATATGGATGTAGATACATTCTCCAATCTAATACAAAATAAAATAGTTTTCATTTATTTGAAAAAGG-AAAAAA----TA---TGCATATGTTCCCCAACCC----AATAAAATATCAATCTCAAAATGGAAATGGAACAAT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196760 137 + 117903854 AATACAGATATGGATATTGGCATGTTCTACAACATAATACCAAATAAAATAGTTTTCATTTATTTGAAAAAGG-GAAAAAA---TA---TACATATGTTCTCGAACTC----AATAAAACATCAGTCTCAAAATGGAAATGTAACCAT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387394 137 - 31320352 GACACAGATATGGATATTTATATATTCTACAACTTAATACCAAATAAAATAGTTTTCATTTATTTGAAAAAGG-GAAAAAA---TA---TACGTATGGTCTCCAACCC----AATAAAATATCAGTCTCAAAATGGAAACGTAACAAT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576594 131 + 2203405 GATACAGATATTGAT------ACATTCTACAACCTAATACCAAATAAAATAGTTTTCATTTATTTGAAAAAGG-GAAAAAA---TA---TACATATATTCTCCAACCC----AATAAAATATCAGTCTCAAAATGGAAATGTAACAAT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533334 135 - 14941987 GATACAGATATGGATATTGATATATTCTACAACCTAATGCCAAATAAAATAGTTTTCATTTATTTGAAAAAGG-GAAAAAA---TA---TAC--ATGTTCTCCAACCC----GATAAAACATCAGTCTCAAAATGGAAATGTAACAAT- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112258593 135 - 122678785 TATATACACACAGACA---ATATCTTCTCCAA--TAAAACTAAAATTAAAAGGTCTAGTTTATTTGAAAAAAG-GAAAAAAAATTG---TATATATGCTCTCCAACCC----AATAAAATTTCTGTTTTAATATGGAAATTGAATAAA- i canFam3.chr1 I 55 I 1 s dasNov3.JH575754 421183 90 - 2150887 --------------------------------------------TAGGATAGGTCTAGTTTATTTGAAAGAGG-AAA-------TA-------CACTCTTTCTAACCCATAAAATAATGGATGAATTTCAGTATGGAAATTGAAGAAAT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11192617 122 - 20685099 I a score=5682935.000000 s hg38.chr18_GL383571v1_alt 4251 494 + 198278 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGTTAGATTTTGTTAGCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTCGAA-TCTGTTGTGTGACAAAAGTCTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTTGTCAAAATATAGCTGGCAGATCAATAAATGTTCAATAACTATAAG-------GAAAA-GGAGGTATAGGCTAGTGGGGAATAATTTATTTAGGTATCTGTTATGCTAGCAGagctcatgatcattctgcaaat-gtggcatcacttactgcagtaagccattccttacacattactgaggtttggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactattctgcattatgatggcatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagGTTACCA--CAG--CAAG s panTro5.chr18 64954928 493 + 78221452 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGGGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTTGAA-TCTGTTATGTGACAAAAGTCTTCATATTTTCTGTTGGTTCATAATAGAGTGAATTAAGTTGTCAAAATATAGCTGGCAGATCAATAAATATTCAATAACTATAAG-------GAAAA-GGAGGTCTAGGCTAGTGGGGAATAATTTATTTAGGTATCTGTTATGGTAGCAGagctcatgatcattctgcaaat-gtggcatcacttactgcagtaagccattccttacacattactgaggttcggtgtctttcctcagtgctcccatatg-cct-tgtttaagaatttactattctgcattatgacgacatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077307 493 + 77229886 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGGGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTTGAA-TCTGTTATGTGACAAAAGTCTTCATATTTTCTGTTGGTTCATAATAGAGTGAATTAAGTTGTCAAAATATAGCTGGCAGATCAATAAATATTCAATAACTATAAG-------GAAAA-GGAGGTCTAGGCTAGTGGGGAATAATTTATTTAGGTATCTGTTATGGTAGCAGagctcatgatcattctgcaaat-gtggcatcacttactgcagtaagccattccttacacattactgaggttcggtgtctttcctcagtgctcccatatg-cct-tgtttaagaatttactattctgcattatgacgacatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298235 493 + 17472758 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGTTAGATTTTGTT-AGCTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTCGAA-TCTGTTGTGTGACAAAAGTCTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTTGTCAAAATATAGCTGGCAGATCAATAAATATTCAATAACTATAAG-------GAAAA-GGAGGTATAAGCTAGTGGGGAATAATTTATTTAGGTATCTGTTATGCTAGCAGagctcatgatcattctgcaaat-gtggcatcacttactgcagtaagccattccttacacattactgaggttcggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactattctgcattatgatggcatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aaggttacca--cag--CAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334439 493 - 152096393 AAAAGTTAGGTTAACTT-AAAGATATTTGTTAGCTAGATGGGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAGAAACAAAACT-A--AAAGGCAATCCCTCGAA-TCTGTTTTGTGACAAAAGTCTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTTGTCAAAATATAGCTGGCAGATCAATAAATATTCAATAACTATAAG-------GAAAA-GGAGGTCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTAGCAGagctcatgatcattctgcaaat-gtggcatcacttactgcagtaagccattcctcacacattactgaagttcggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactattctgcattatgatggcatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--taa--caag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57290804 493 + 70235451 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCTGTCGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTGATTCATAATAGAGTGAATTAGGTTGTCAAAAGACAGCTGGTAGATCAATAAATATTCAATAACTATAAG-------GAAAA-GGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCAGAGCTCATGATCACTCTGCAAAG-GTGGCAtcacttactgcagtaagccattcctcacacattactggggtttggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactcttcttcattatgatgacatttctccttaaacaaacagtaagttttttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62982178 493 - 75711847 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCTGTCGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTGATTCATAATAGAGTGAATTAGGTTGTCAAAAGACAGCTGGTAGATCAATAAATATTCAATAACTACAAG-------GAAAA-GGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCAGAGCTCATGATCACTCTGCAAAG-GTGGCAtcacttactgcagtaagccattcctcacacattactggggtttggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactcttcttcattatgatgacatttctccttaaacaaacagtaagttttttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13534699 493 - 18804593 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCTGTTGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTAATTCATAATAGAGTGAATTAGGTTGTCAAAAGACAGCTGGTAGATCAATAAATATTCAATAACTATAAG-------GAAAA-GGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCAGAGCTCATGATCACTCTGCAAAG-GTGGCAtcacttattacagtaagccattcctcacacattactggggtttggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactcttcttcattatgatgacatttctccttaaacaaacagtaagatttttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13151722 494 + 18905526 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACTAAACT-A--AAAGGCAATTCCTCGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTGATTCATAATAGAGTGAATTAGGTTGTCAAAAGACAGCTGGTAGATCAATAAATATTCAATAACTATAAG-------GAAAAGGGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCAGAGCTCATGATCACTCTGCAAAG-GTGGCAtcacttactgcagtaagccattccttacacattactggggtttggtgtctttcctcagtgctcccatatg-cct-tgtttatgaatttactattcttcattatgatgacatttctccttaaacaaacagtaagtttcttaaaggcagggactttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59981083 494 - 72318688 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTTGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTGATTCATAATAGAGTGAATTAGGTTGTCAAAAGACAGCTGGTAGATCAATAAATATTCAATAACTATAAG-------GAAAAGGGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCGGAGCTCATGATCACTCTGCAAAG-GTGGCAtcacttactgcagtaagccattccttacacattactgggttttggtgtctttcctcagtgctcccatatg-cct-tgtttacaaatttactattcttcattatgatgacatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 315444 494 - 1517660 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCTTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTCGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTGATTCATAATAGAGTGAATTAGGTTGTCAAAAGACAGCTGGTAGATCAATAAATATTCAATAACTATAAG-------GAAAAGGGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCGGAGCTCATGATCACTCTGCAAAG-GTGGCAtcacttactgcagtaagccattccttacacattactggggtttggtgtctttcctcagtgctcccatatg-cct-tgtttacgaatttactattcttcattatgatgacatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aagcttaaca--cag--caag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3415287 493 + 6513552 AAAAGTTAGATTAACTT-AAAGATTTTTGTTAGCTAGATGAGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAAACAAAACT-A--AAAGGCAATCCCTCGAA-TCTGTTGTTTGACAAAAGTCTTCAGATTTTCTGCTGATTCATAATAGAGTGAATTAGGTTGTCAAAATAGAGCTGGTAGATCAATCAATATTCAATAACTATAAG-------GAAAA-GGAGGGCTAGGCTAGTGGGGAATAATTTATTTAGGTAGCTGTTATGctggcagaactcatgatcactctgcaaag-gtggcatcacttactgcagtaagccattccttacacattactggggttcggtgtctttcctcagtgctcccatatg-cct-tgtttacaaatttactattcttcattatgatgacatttctccttaaacaaacagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgccacatac-----c------aggcttaaca--cag--caag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105196897 487 + 117903854 AAAA-GTAGATT------AAAGTTTTTCATTAGCTGCATGGGTGGCCTT-CATTTTTCAATACGTAAATATGTCTTTTT---------CAAAGACAAAACT-A--AAAGGCAATCCCTCGAA-TCTGTCATGTGACAAAAGTTTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTTGTCAAAATATAGCTGGTAAATCAATAAATATTCAATAAGCATAAG-------GGAAG-GCATGCCTAGGCTAGTGGAGAATAATTTATTTAGGTAGCTGTTATGCTGGCAGAGCTCATGATCTctcagcaaat-gtggcatcacttactgcagcaagccatcccttacacgttactgaggtttgctgtctttcctccgtgctcccatatg-cct-tgtttaagaatttactcttttgcattatgatggcatttctccttaaacaaatagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgctacacac-----c------aagcttaaca--cag--caag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19387531 494 - 31320352 AAAATTTAGATTAACTTAAAAGATTTTCATTAGCTGGATGGGTGACCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAGACAAAACTAA--AAAGGCAATCCCTCAAA-TCTGTTGTGTGACAAAAGTTTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTTGTCAAAATATAGCTGGTAAATCAATAAATGTTCAATAAGTACAAG-------GAAAA-GCATGCCTAGGCCAGTGGGGAATAATTTATTTAGGTAGCTGTTATGCTGGCAGAGCTCATGGTCTCTCTGCAAAT-GTGGCAtcacctgctgcagcaagccatcccttacacgttactgaggtttgc-atctttcctcagtgctcccatatg-cct-tgcttaagaattgactcttttgcattatgatggcatttctccttaaacaaatagtaagtttcttaaaggcagggatttcatcttatt-----a--------ttttttgctacacac-----c------aagcttaaca--cag--caag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1576725 488 + 2203405 AAAAGTTAGATTAACTT-AAAGATTTTCATTAGCTGGATGGGTGACCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAGACAAAACT-A--AAAGGCAATCCCTCAAA-TCTGTTGTGTGGC-AAAGTTTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTTGTCAAAATATAGCTGGTAAATCAATA----TTCAATAAGTATAAG-------GAAAA-GCATGCCTAGGCTAGTGGGGAATAATTTATTTGGGTAGCTGTTATGCTGGCAGAGCTCATGATCTCTCTGCAAAT-GTGGCAtcacttactgcagcaagccatcccttatacgttactgaggtttgctgtctttcctcagtgctcccatatg-cat-tgtttaagaatttactcttttgcattatgatggcatttctccttaaacaaatagtaagtttcttaaaggcagggattttatcttatt-----a--------ttctttgctacacac-----c------aagcttaata--cag--caag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533469 493 - 14941987 AAAAGTTAGATTAACTT-AAAGATTTTCATTAGCTGGATGGGTGGCCTT-CCTTTTTCAATACCTAAATATGTCTTTTT---------CAAAGACAAAACT-A--AAAGGCAATCCCTCAAA-TCTGTTGTGTGACAAAAGTTTTCAGATTTTCTGTTGGTTCATAATAGAGTGAATTAGGTGGTCAAAATATAGCTGGTAAATCAATAAATATTCAATAAGTATAAG-------GAAAA-GCATGCCTAGGCTAGTAGGGAATAATTTATTCAGGTAGCTGTTATGCTGGCAGAGCTCATGGTCtctcggcaaat-gtcgcatcacttactgcagcaagtcgtccctaacacgttagtgaggtttgctgtctttcctcagtgctcccatatg-cct-tgtttaagaatttactcttttgcattatgatggcatttctccttaaacaaatagtaagtttcttaaaggcagggattttatcttatt-----a--------ttatttgctacacac-----c------aagcttaaca--cag--CAAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11192739 410 - 20685099 ATAAGTCAGATGAACTT-GAAGATTCTTG----------------------------------------------TTTT---------CAAAAACAAAACT-A--AAAGGCA--------AA-TCTGTTTTGTGACAAAGGTCTTTAGA--TTCTGTTAGTTCATA------------------------------------ATCaataaatattaaataactataaaataat--GATAA-GGAGATGTAGGCTTGCAG-GAATAATTTGCTTAGGTAGCTGTTATGAtggccaagctcttgatcactctgtaaat-ctggcttcctttactcctggaagcagtctctc-cccagagcagagg--cagtgtctttcctagatgcttccatatgccct-tatttaagaattcgctacttggca-aatgttgacatctctcctcaaacaaacagtaagcttcttaaaggcaggcatttcatctttttacagca--------tattttactacatac-----a------aggtttagcatgtag--caag i otoGar3.GL873546 I 122 I 529 s canFam3.chr1 112258729 483 - 122678785 AAAA----GATTAACTT-AAAGTGTCTTGTCAACTAGATGGCTGACCTT-ATTTTCTAAATA-------------TATT---------AAAAaacaacaac-aacaacaacaaTCCCTCAGA-TC-ATTGTAGGACAAAGTTCTTAATA-----TGCTAGTTCATAATACAGACCATTAAATTGTCAAAATATAGCTG----ATCACTAAACATTCAATAATTACAAAATAATGAAAAAA-AAAGGTCTAGGCTTATGGGGGATAATTTATTTAGGTAGCTGCTCTGCTGGCAAAGCTCATGATTACTCTCTAAAT-CTGGCAT----TACTGTGggaagctttccctcacacaccatggaag-taaatgtccttcctcagtgctcacatatgtccc-tgtttaagtatttattactctgtcttgtgataacatttttccttaagcaaacagtg----tcttaatgacagggacttcctcttatt-----ACATTATTTTTTTTTGCCGCAGAT-----CTGTGCAAAGCTTAGCA--CATACCAAG i canFam3.chr1 I 1 I 22 s dasNov3.JH575754 421273 488 - 2150887 AAAAGTCAGATTAACTT-AAAGAGCCTTGTAAATTGAATGGCTGGTATT-TTTTGTGTAATAGCTCATTATGTCTTTTTTTTTTTCCCCAAA----------A--AAAACCAATCCTTAAAAGTCTGTT----GACAGAGATCTTCGAA--TTCTGTTTATTCAAAATCTAGTCAGTTA-----CCAAAATATAGCTGATAAATCAGataaaaatgaaaatttataaaat-----aataa-GAGCTCTTAAACTAGGAGAAACTAATTTATTCAGGTAACTGTTATGCTGGCAAAACTCGTCATTACTTTGTAAATCCTGGCATCACTTCTTATAGAAG--TGTTCCTTAAACCATG-GGAATTTAAATGCCCTTCCTCAGTGCTCAAAAATC-CCTCTGTGTAGGAATTTACTACCTTGCACTATGATGAAATTTTTCCTTAACCCGACAGTTA----CTTGAAGGCAGGAACTTCATCTTATTAAGTTA--------TAATTTGCCACATACTCACAC------AGGCTT--TA--AAG--CTAG i dasNov3.JH575754 C 0 C 0 a score=219291.000000 s hg38.chr18_GL383571v1_alt 4745 23 + 198278 TTACTCA------TTTTATTTTCTAGACG s panTro5.chr18 64955421 23 + 78221452 ttactca------ttttattttctagaca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077800 23 + 77229886 ttactca------ttttattttctagaca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298728 23 + 17472758 TTACTCA------TTTTATTTTCTAGACG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334932 23 - 152096393 ttactca------ttttattttctagagg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57291297 23 + 70235451 ttactca------ttttactttctatacg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62982671 23 - 75711847 ttactca------ttttactttctatacg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13535192 23 - 18804593 ttactca------ttttactttctatacg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13152216 23 + 18905526 ttactca------ttttattttctataca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59981577 23 - 72318688 ttactca------ttttattttctataca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 315938 23 - 1517660 ttactca------ttttattttctataca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3415780 23 + 6513552 TTATTCA------TTTTATTTTCTATACG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105197384 23 + 117903854 ctactca------ttttattttctggatg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388025 23 - 31320352 ttactca------ttttattttccagatg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1577213 23 + 2203405 tcactca------ttttattttctggatg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533962 23 - 14941987 TTACTCA------TTTTATTTTCTGGATG i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112259234 23 - 122678785 ttttttt------tttctttttCTGGAGG i canFam3.chr1 I 22 C 0 s dasNov3.JH575754 421761 24 - 2150887 -----CAAGGAATCTTTCCTTGCTGGATA i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11193149 529 - 20685099 I a score=4598715.000000 s hg38.chr18_GL383571v1_alt 4768 384 + 198278 AATACAT-----------AAATGAATATA-TTAGGAGAAATGCATCCTAAACCCCCTTG---GAAAAAAAATCATTTGCCAGAATTGTTGAACTACTACTTCCTTTATGGTCTGTTAAATCAGTATCAGATGGGTCCTCATATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGTGGTATCCCGAAAAGATA----------------CCATTACTAAGCTTGGC-------TTTTTTTTAAAAGTAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TAAGCAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGTAGAAAGCTTGCTCCTTGTCACCTTCA s panTro5.chr18 64955444 384 + 78221452 aataaat-----------AAATGAATATG-TTAGGAGAAATGCATCCTAAACCCCCTTG---AAAAAAAAATCATTTGCCAGAATTGTTGAACTACTACTTCCTTTACAGTCTGTTAAATCAGTATCAGATGGGTCCTCATATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGTGGTATCCCGAAAAGATA----------------CCATCACTAAGCTTGGC-------TTTTTTTAAAAAGTAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TAAGCAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGTAGAAAGCTTGCTCCTTGTCACCTTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64077823 383 + 77229886 aataaat-----------AAATGAATATG-TTAGGAGAAATGCATCCTAAACCCCCTTG---AAAAAAAAATCATTTGCCAGAATTGTTGAACTACTACTTCCTTTACAGTCTGTTAAATCAGTATCAGATGGGTCCTCATATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGTGGTATCCCGAAAAGATA----------------CCATCACTAAGCTTGGC-------TTTTTTTAAAAAGTAAATGTAAT-AAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TAAGCAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGTAGAAAGCTTGCTCCTTGTCACCTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5298751 384 + 17472758 AATACAT-----------AAATGAATATA-TTAGGAGAAATGCATCCTAAACTCCCTTG---AAAAAAAAATCATTTGCCAGAATTGTTGAACTACTACTTCCTTTACGGTCTGTTAAATCAGTATCAGATGGGTCCTCATATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGCGGTATCCCGAAAAGATA----------------CCATTACTAAGCTTGGC-------TTTTTTTTAAAAGTAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TAAGCAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGTAGAAAGCTTGCTCCTTGTCACCTTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139334955 388 - 152096393 aataaat-----------AAATGAATATG-TTAGGGGAGATGCATCCTAAACCCCCTTG---AAAAAAAAATCATTTGCCAAAATTGTTGAACTACTACTTCCTTTACGGTCTGTTAAATCAGTATCAGATGGGTCCTTATATAT-AGG-AAATACTTCATATGTATGTTAACACAGAACAACAGCAGTATCCTGAAAAGATA----------------CCATCACTAAGCTTGGC-------TTTTTTTAAAAAGTAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TCAGCAAAACTCTGTTTAGCTGTCAGTAAAAATGATTGATGTTCAGCAAGTCTTTGTAGACCACATGCTTGAGCC-TTTTGTTGTTACATTTTGAAGTAGAAAGCTTGCTCCTCGTCACCTTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57291320 386 + 70235451 aataaat-----------aaatGAAGATG-TTAGGAGAAATGCATCCTAAACAACCTTG----AAAAAAAATACTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCGTCTGTTAAATCAGTATCAGATGGGTGCTTATATAT-AGA-AAATACTT-ATATATATGTTAATACAGAAAAACAGCGGCATCCCAAAAAGATA----------------TCATCACTAAGCTTGGC-TTTTTTTTTTTTTTTTAAGTAAATGTAATAAAAATTCAATAGGTTTGCTTGGATTTGCCTTCATGAAA--TAAGCAAAA--CTGCTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAACC-TTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62982694 387 - 75711847 aataaat-----------aaatGAAGATG-TTAGGAGAAATGCATCCTAAACCACCTTG----AAAAAAAATCCTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCGTCTGTTAAATCAGTATCAGATGGGTGCTTATATAT-AGA-AAATACTTCATATATATGTTAATACAGAAAAACAGCGGCATCCCGAAAAGATA----------------TCATCACTAAGCTTGGC-TTTTTTTTTTTTTTTTAAGTAAATGTAATAAAAATTCAATAGGTTTGCTTGGATTTGCCTTCATGAAA--TAAGCAAAA--CTGCTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAACC-TTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13535215 387 - 18804593 aataaat-----------aaatGAAGATG-TTAGGAGAAATGCATCCTAAACCACCTTG----AAAAAAAATCCTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCGTCTGTTAAATCAGTATCAGATGGGTGCTTATATAT-AGA-AAATACTTCATATATATGTTAATACAGAAAAACAGCGGCATCCCGAAAAGATA----------------TCATCACTAAGCTTGGC-TTTTTTTTTTTTTTTTAAGTAAATGTAATAAAAATTCAATAGGTTTGCTTGGATTTGCCTTCATGAAA--TAAGCAAAA--CTGCTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAACC-TTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13152239 387 + 18905526 aataaat-----------aaatGAAGATG-TTAGGAGAAATGCATCCTAAACCACCTTG---AAAAAAAAATCCTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCATCTGTTAAATCAGTATCGGATGGGTGCTTATATAT-AGA-AAATACTTCATATATATGTTAATACAGAAAAACAGCGGCATCCCGAAAAGATA----------------TCATCACTAAGCTTGGC--TTTTTTTTTTTTTTTAAGTAAATGTAATAAAAATTCAATAGGTTTGCTTGGATTTGCCTTCATGAAA--TAAGCAAAA--CTGCTTAGCTATCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAGACCACATGCTTGAACC-TTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59981600 389 - 72318688 aataaat-----------aaatGAAGATG-TTAGGAGAAATGCATCCTAAACCACCTTG---GAAAAAAAATCCTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCGTCTGTTAAATCAGTATCAGATGGGTCCTTATATAT-AGA-AAATACTTCATATATATGTTAATACAGAAAAACAGCGGCATCCCGAAAAGATA----------------TCATCACTAAGCTTGGCtttttttttttttttttAAGTAAATGTAATAAAAATTCAATAGGTTTGCTTGGATTTGCCTTCATGAAA--TAAGCAAAA--CTGCTTAGCTGTCAGTAAAAA----TGATGTTCAGCAAGTCTTTGTAGACCACATGCTTGAACC-TTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 315961 385 - 1517660 aataaat-----------aaatGAAGATG-TTAGGAGAAATGCATCCTAAACCACCTTG---AAAAAAAAATCCTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCGTCTGTTAAATCAGTATTGGATGGGTGCTTATATAT-AGA-AAATACTTCATATATATGTTAATATAGAAAAACAGTGGCATCCCGAAAAGATA----------------TCATCACTAAGCTTGGC-----TTTTTTTTTTTTAAGTAAATGTAATAAAAATTCAATAGGTTTGCTTGGATTTGCCTTCATGAAA--TAAGCAAAA--CTGCTTAGCTGTCAGTAAAAA----TGATATTCGGCAAGTCTTTGTAGACCACATGCTTGAACCTTTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3415803 391 + 6513552 AATAAAT-----------AAAAGAAGATG-TTAGGAGAAATGCATCCTAAACCACCTTG-AAAAAAAAAAACCCTTTGCCAAAATTGTTGAACTACTACTTCCCTTATCATCTGTTAAATCAGTATCAGATGGGTCCTTATATAT-AGA-AAATACTTCATATATATGTTAATACAGACAAACAGCGGCATCCCGAAAAGATA----------------CCATCACTAAGCTTGGC--TTTTTTTTTTTTTTTAAGTAAATGTGATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TAAGCAAAACTCTGCTTAGCTGTCAGTAAAAA----TGATGTTCGGCAAGTCTTTGTAAACCACAGGCTTGAACC-TTTCCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105197407 385 + 117903854 aataagt-----------AAATGAACACA-TTAGGAGAAATGCATCCTATACCACCTTG-AAAAAAAAAAATCCTTTGCCAAAACTGTTGAACTACTGCTACCCTTACAGTCTGTTAAATCAGTATCAGCTGGGTCTTTATATAG-AGG-AAACACTTCATACATATGTTAATACAGAACAACAGTGGTATCCCGAAAAGATA----------------TTATCACTAAGCTTGCC------TTTCTTTTTTAAAGCATATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTCATGAAA--TAAACAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCAGCCAATC--CGTAGATCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGCAGAAAGCTTACTCCTTGTCACCTTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388048 382 - 31320352 aataagt-----------aaatG-ATACA-TTAGGAGAAATGCATCCTACACCACCTTG---AAAAAAAAATCCTTTGCCAAAATTGTTGAACTACTACTACCCTTACAGTCTGTTAAATCAGTATCAGATGGGTCTTTATATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGTGGTATCCCAAAAAGATA----------------TTATCACTAAGCTTGGC------TTTCTTTTTTATAGCAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTTATGAAA--TAAACAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCAGCAAGTC--CGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1577236 383 + 2203405 aataagt-----------AAATGAATACA-TTAGGAGAAATGCATCCTATACCACCTTGAAAAAAAAAAAATCCTTTGCCAAAATTGTTGAACTA---CTACCCTTACAGTTTGTTAAATCAGTATCAGATGGGTCTTTACATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGTGGTATCCCAAAAAGATA----------------TTATCACTAAGCTTGGC------TTTCTTTTTTAAAGCAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTTATGAAA--TAAACAAAACTCTGTTTAGCTGTCAGTAAAAA----TGATGTTCAGCAAGTC--CGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3533985 385 - 14941987 ATTAAGT-----------AAATGAATACA-TTAGGAGAAATGCATCCTATACCACCTTG-GAAAAAAAAAATCCTTTGCCAAAATTGTTGAATTACTACTACCCTTACAGTCTGTTAAATCAGTATCAGATGGGTCTTTATATAT-AGG-AAATACTTCATATATATGTTAATACAGAACAACAGTGGTATCCCAAAAAGGTA----------------TTATCACTAAGCTGGGC------TTTCTTTTTTAAAGCAAATGTAATAAAAATTCAATAGGTTTGTTTGGATTTGCCTTTATGAAA--TAAACAAAACTCTGTTCAGCTGTCAGTAAAAA----TGATGTTCAGCAAGTC--CGTAGACCACATGCTTGAGCC-TTTTCTTGTTACATTTTGAAGCAGAAAGCTTGCTCCTTGTCACCTTCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11193678 368 - 20685099 AATATGC-----------AAA--AATATG-TTAGAGGAAA-GCATTCTAAAATGCCTTG----ACAAAAATTCCTTTGCCAAAATAATCGAACTGCT-CCTCCTGTAGAGCCTGTGAATTCAGTATTAGATGAGTCGCTAAATATGACC-AAATATTTCATATGTATGTTAATACAGAATAACAACA-TATCCCAAAAAGATA----------------TTAACAGTAAGCCTGAC----------TTTTTGAAAACAAATGTAAT-ACAATGCAATGGTTTTGTTTGGATTTTCCTCTATGAAA--TGAAT------CTGCTTTGCTGTCAGTAAGAA----CGATGTTT-GCAGGTGTTTGCAGGCCGCATGGCTGAGCC-TTTTCTTGTTACATTTTAAAGTAAGAAGCCTGCTCCTTGTCACCTTCA i otoGar3.GL873546 I 529 C 0 s canFam3.chr1 112259257 393 - 122678785 AATAAGTGAAACAAAACAAAACAAATATGTTTAGGAAGAATGTGTTCTAAACCACCTTG-----AAAAAAATTATTTGTCAAAATAGCTGAACTATTGCT-CCCTTACAGTCTATTAAATCAGTATTAGATGGGTTCCTCTATTG-AGGCAAATATCTCATATATATGTTAATATAGAGTAACAGCTATATCCCAAAAAGATA----------------TTAACAGTAAACTTGAC----------TTTTTGAAAATAAATGTAATAAAAATTCAATAGGTTTATTTGGATTTGGCTTTATGAAAACAAAACAAAAGTCTGTTATGCTGTCAGTAAAAA----TGATGTTCTGCAAATCTTTGTAGGCCACATGGCTGAGCC-TTTTCTTGTTACATTTTGGAGTAGGAAGCTTGCTCCTCATCACTTTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 421785 351 - 2150887 AATAAAT-----------AAATAAATATG-TTATGAGGAATGGATTCTAAACCACCTTG------AAAAAATCATTTACCAAAGTAGTTGAACTATTG-TTCCTTTAGAGTCTTTGAAATCAGTGTTAGATAGGT-----------CCG-AAGT-----------------CTACAGAATAAGAGCTTCATTCCAAAGAGATATAAAAAAGATATTAACTTAACAGTGAGCATGAC-----------TTTTGAAAATAAATGTAGGAAAAATTCAATAGGTTTATTTGGATTTGATTCTGTGAAA--AAA--AAATCTCCATTTT-CTGTCAGTAAAAA----TGATGTTC----------TGTGGACCACACGGCTGAGCC-TTT-CATGTTACATTTTGAAGTAGGAGACCTGCTCTTTGTCACCTTCA i dasNov3.JH575754 C 0 C 0 a score=5126157.000000 s hg38.chr18_GL383571v1_alt 5152 369 + 198278 ATTTGACATTTTACAGGAACTAGAAACATAAGTCATGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCTAGCTGAC--CACCAATAATCTTAAATGTCAACAACGTCAGATTTCAATT---TTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTGGCTTGGCAGATGGTTTTATATTACCTCTGTTTAAATATAATACTTTAAACTTCTTATTGAATCAGGCAAATGGAATGGAGCATTCGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAG-TCAGCTCTC-----TGGATTGGCT s panTro5.chr18 64955828 369 + 78221452 ATTTGACATTTTACAGGAACTAGAAACATAAGTCATGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCTAGCTGAC--CACCAATAATCTTAAATGTCAACAACGTCAGATTTCAATT---TTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATATTACCTCTGTTTAAACATAATACTTTAAACTTCTTATTGAATCAGGCACATGGAATGGAGCATTCGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAG-TCAGCTCTC-----TGGATTGGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078206 369 + 77229886 ATTTGACATTTTACAGGAACTAGAAACATAAGTCATGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCTAGCTGAC--CACCAATAATCTTAAATGTCAACAACGTCAGATTTCAATT---TTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATATGACCTCTGTTTAAACATAATACTTTAAACTTCTTATTGAATCAGGCACATGGAATGGAGCATTCGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAG-TCAGCTCTC-----TGGATTGGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299135 369 + 17472758 ATTGGACATTTTACAGGAACTAGAAACATAAGTCATGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCTAGCTGAC--CACCAATAATCTTAAATGTCAACAACGTCAAATTTCAATT---TTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATATTACCTCTGTTTAAATATAATACTTTAAACTTCTTATTGAATCAGGCAAATGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAG-TCAGCTCTC-----TGGATTGGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335343 371 - 152096393 ATTTGACATTTTACAGGAACTAGAAACGTAAGTCAGGTAGAGAAACATGTTACATATTG---TTTGTTCCCCTGTATCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGAATTCAATT---TTGTTCACTGAATCACCACACTGTGGATTG-AAAAACCGATCTCT---ACTTTTATTGTTCTGAATGTTTCCTATGTGGTGATTAAAAG---AAAAAGAGAA-----AGA--AAAACATTTGACTTTCTTGGCAGATGGTTTTATATTACCTCTGTTTAAATAT-ATACTTTAAACTTCTTATTGAATCAGGCAAATGGAATGGAGCATTCGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAG-TCAGCTCTC-----TGGATTGGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57291706 377 + 70235451 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATACTG---TTTTTTCCCTTGTAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCCCTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTACTTCTGTTTAAATATAATACTTTAAATTTCTTATTGAATCAGGCAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTACACTAAGAAGGAAA-TCAGCTCTCCCGATTGGATTGGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983081 377 - 75711847 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATACTG---TTTTTTCCCTTGTAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCCCTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTACTTCTGTTTAAATATAATACTTTAAATTTCTTATTGAATCAGGCAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTACACTAAGAAGGAAA-TGAGCTCTCCCGATTGGATTGGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13535602 371 - 18804593 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATACTG---TTTTTTCCCTTGTAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGCGGATTG-AAAAACTGATCTCTACCCCTTTTATTGTTCTAAATGTTTCCTATGTGGTGATT---------A------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTACTTCTGTTTAAATATAATACTTTAAATTTCTTATTGAATCAGGCAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTACACTAAGAAGGAAA-TCAGCTCTCCCGATTGGATTGGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13152626 377 + 18905526 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATACTG---TTTTTTCCCTTGTAGCTGAC--CACCAATGATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCCCTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTACTTCTGTTTAAATATAATACTTTAAATTTCTTATTGAATCAGGTAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAA-TCAGCTCTCCCGATTGGATTGGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59981989 377 - 72318688 ATTTGACATTTTACAGGAACTAGAAACACAAGTCAGGTAGAGAAACATGTTACATACTG---TTTTTTCCCTTGTAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTCCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCCCTTTTATTATTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTACTTCTGTTTAAATATAATACTTTAAACATCTTATTGAATCAGGCAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAGTATGTTTAAACTAAGAAGGAAA-TCAGCTCTCCCGACTGGATTGGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316346 371 - 1517660 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATACTG---TTTTTTCCCTTGTAGCTGAC--CACCAATGATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCCCTTTTATTGTTCTAAATGTTTCCTATGTGGTGATT---------A------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTACTTCTGTTTAAATATAATACTTTAAATTTCTTATTGAATCAGGCAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAA-TCAGCTCTCCTGATTGGATTGGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416194 377 + 6513552 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGACACATGTTACATACTG---TTTTTTCCTCTGTAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTCTTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTATCCCTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AA-----AGA--AAAACATTTGACTTGCTTGGCAGATGGTTTTATGTTGCTTCTGTTTAAATATACTACTTTAAACTTCTTATTGAATCAGGCAAAAGGAATGGAGCATTTGCCTGCTTCATA----AAATATGTTTAAACTAAGAAGGAAA-TCAGGTCTCCTGATTGGATTGGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105197792 370 + 117903854 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATATTG---TTTCTTCCCCTCAAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGCTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCATTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAA--------------------AAA--AAAAATATTGACTGGCTTGACAGATGGTTTTATGTTACCTCTGTTTAAATATAATACTTCACACTTCTTATTGAATCAGGCAAATGGAATCGGGCATTCTCCTGCTTCATAAAATAAATACATTTAAACTAGAAAGGAAA-TCAGCACTC-----TGGATTGGCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388430 368 - 31320352 ATTTGACATTTTACCAGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCAAGCTGAC--CACCAGTAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGCTCACTGAATCACCACATTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AAA---GAAA--AAAAAAATTGACTGGCTTGACAGATGGTTTTATGTTATCTCTGTTTAAATATAATACTTTGAA---CTTACTGAATCAGGCAAATGGAATGGGGCATT---CTGCTTCATA----GAATGCATTTAAACCAAGAAGGAAA-TCAGCTCTC-----TGGATTGGCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1577619 370 + 2203405 ATTTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCAAGCTGAC--CACCAATAATCTTAAATGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAT---AA------AAA----GAA--AAAAAAATTGACTGGCTTGACAGATGTTTTTATGTTACCTCTGTTTAAATATAATACTTTGAACTTCTTATGGAATCGGGCAAATGGAATGGGTCATT---CTGCTTCATA----AAATACATTTAAACTAAGAAGGAAA-TCAGCTCTC-----TGGATTGGCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534370 371 - 14941987 ATCTGACATTTTACAGGAACTAGAAACAT--GTCAGGTAGAGAAACATGTTACATATTG---TTTTTTCCCCTCAAGCTGAC--CACCAATAATCTTAAATGTCAACAATGCCAGATTTCAATTTTGTTGTTCACTGAATCACCACACTGCGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAATGTTTCCTATGTGGTGATTAAAAG---AA------AAA----GAA--AAAAAAATTGACTGGCTTGACAGATGGTTTTATGTTACCTCTGTTTAAATACAATACTTTGAACTTCTTATTGAATCAGGTAAATGGAATGGAGCATTCTCCTGCTTCATA----AAATACGTTTAAACTAAGAAGGAAA-TCAGCTTTC-----TGGATTGGCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1202035 371 - 1406956 ATTTGACATTTTACAGGAACT---AACATAAGTCAGGTAGAGAAACATGTTACACATTG---TTTGCTCCCCTCTAGCTGACCACACCAGTAATCTTAAATGTCAACGATGTCAGATTTCAATTTTGTTGTTCACTGAATCACCACATTGTGGATTG-AAAAACTGATCTCTACCACTTTTATTGTTCTAAACATTTCCTATGTGATGATTAAAAG---AA------AA-----AAAA-AAAACACTTGACTTGCTTGACAGCTGGCTTTATTTTACCTGTGTTTAAACATAGTACTTTAAACTTCTCATTGAATCGGGCAGATGGAGTGGAGCAATCGCC-ATGTAATA----CAGTATGTATAATCTAAGAAGGCAG-TCAGCTCTC-----TGGATTGGCT i proCoq1.NW_012148742v1 N 0 I 32 s otoGar3.GL873546 11194046 370 - 20685099 CTTTGACATTTTACAGGAACTGGAAACATAAGTCAGGGAGAGACACACGTTACACATTG---TTTTTTCCCCTCTAGCTGAC--CACCAGTAATCTTAAATGTCAACAGTGTCAGATTTCAATTTTGTTGTTCACTGAATCGCCGTGCTGTGGA-TG-AAAACCTGATCGCCACAGCTTTTACCTTCCTAAATGTTTCCTGTGTGATGATTAAAAG---AA------AA-----AAAATAAAACCCTTGACTTGCTTGACAGCTGGCTTTATTTTACCC-CATTTATAGGTAGTACTTTAAACTTCTCATTGAATTGGGTGAATGGAG-GGAGCAATCACCTGTATGGTA----CAATCTGTATGATCTAA-AAGGCAA-TCAGCTCTC-----CACATTGGCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112259650 373 - 122678785 ATTTGACATTTTACAGGAGCTAGAACCATAAGTCAGGTAGGGAAACATGTTACATACTGTTTTTTTTTCCCCTCTAGCTGAG--GACCAGTAATCTTAA--GTCAACAATGTCAAATTTCAATTTTGTTGTTTACTGAATTACCATGCTGTGGATTC-AAACACCAACCTCTGCTGCTTTTATTCTTCTAAGTCTTTCCTATGTGATGATTAAAAG---AA------AAAAGAAAAA--AAAAAACTTAACTTGCTTGACAGCTGGCTTTATTTTGCCTCTGTTTAAACGTAACATTTTAAATTCCTTATTGAATTAGGCAGATACAA-----CAATCGCCTGCCTAATA----CAATATGTATAACCTAAGAAGGAAA-GCTACTCTC-----TTGATTGACA i canFam3.chr1 C 0 I 17 s dasNov3.JH575754 422136 369 - 2150887 ATCTGACATTTTACAGGAACTAGAAACATAAGTCAGGTAGGGAAACATGTCACATATTG---TTT--TCCCCTCTAGCTGAC--TA-CAATAATCTTAAAAGTCAACAATGTCAGATTTCAATTTTGTTGTTCACTGAATTACCACATTGTGGCCTGAAAAAAACAATCTCTCCTGCTTTTATTGTTCTAAACCTTTCCAATATGATGATTAAAAGACCAG------GA-----AAA--AGAATACTTGACTTGCTTGACAGCAGGCTTTATCTTACCTGCTTTTAAAGATAATACTTTAAACTTCTTATTGAGTCAAGTA-----AATAGAGCAATTGCCTGCCTAATA----CAATAGATATAAACAAAGAAGGAAATTCAGCTATC-----TCGATTGGCT i dasNov3.JH575754 C 0 C 0 a score=128359.000000 s hg38.chr18_GL383571v1_alt 5521 37 + 198278 TGCA-GCTGTTACTTAC------C----------TTTTTTTGTTGTTGTGGGGG s panTro5.chr18 64956197 36 + 78221452 TGCA-GCAATTACTTAC------C----------TTTTTT-GTTGTTGTGGGGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078575 35 + 77229886 TGCA-GCAATTACTTAC------C----------TTTTT--GTTGTTGTGGGGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299504 36 + 17472758 TGCA-GCTATTACTTAC------C----------TTTTTT-GTTGTTGTGGGGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335714 36 - 152096393 TGTA-GCAATTATTTAC------C----------Tttttt-gttgttgttgttg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292083 41 + 70235451 TGCA-GCAATTATTAAC------Ctttttttttttttttt-tttttttt----- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983458 41 - 75711847 TGCA-GCAATTATTTAC------Ctttttttttttttttt-tttttttt----- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13535973 34 - 18804593 TGCA-GCAAttattttc------c-------ttttttttt-tttttttt----- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153003 31 + 18905526 TGCA-GCAAttatttac------t----------tttttt-tttttttt----- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982366 32 - 72318688 TGCAGGCAATTATTTAC------C----------TTTTTT-TTTTTTTT----- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316717 31 - 1517660 TGCA-GCAATTATTTAC------C----------TTTTTT-TTTTTTTT----- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416571 26 + 6513552 TGCA-GCAATTATTTAC------C---------------T-TTTTTTTT----- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198162 26 + 117903854 TGTA-GCAATTATTTAC------C----------ATTTTC-TTT---------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388798 25 - 31320352 TGTA-GCAATTATTTAG------C----------ACTTTC--TT---------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1577989 26 + 2203405 CGTA-GCAATTATTTAC------C----------ACTTTC-TTT---------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534741 26 - 14941987 TGTA-GCAATTATTTAC------C----------ATTTTC-TTT---------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11194416 33 - 20685099 -----ACTGGTATTTATGCAGTAC----------TTTTTC-TTTTTTTC----- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260040 34 - 122678785 --tg-ttttttttttgt------t----------tttttt-ttttttgttgttg i canFam3.chr1 I 17 I 3 s dasNov3.JH575754 422505 28 - 2150887 TTCA-GCATTTATTTAG------C----------AATTTT-TTATT-------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1202406 32 - 1406956 I a score=1128883.000000 s hg38.chr18_GL383571v1_alt 5558 92 + 198278 TGGTAAGGTGCCTACTATGTGAAGTATATTATATGAGTTGTGGATTGGTTAC-AAAAATGAATGACACGAATATCTGTTTTGACAGATTTTAA s panTro5.chr18 64956233 92 + 78221452 TGGTAAGGTGCCTACTATGTGAAGTATATTATATGAGTTGTGGATTGGTTAC-AAAAATGAATGACACGAATATCTGTTTTGACAGATTTTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078610 92 + 77229886 TGGTAAGGTGCCTACTATGTGAAGTATATTATATGAGTTGTGGATTGGTTAC-AAAAATGAATGACACGAATATCTGTTTTGACAGATTTTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299540 92 + 17472758 TGGTAAGGTGCCTACTATGTGAAGTATATTATGTGAGTTGTGGATTGGTTAC-AAAAATGAATGACACGAATATCTGTTTTGACAGATTTTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335750 87 - 152096393 tggtAAGGTGCCTACTGTGTGAAGTATA-----TGAGTTGTGGATTGGTTAC-AAAAATGAATGACACGAATATCTGTTTTGACAGATTTTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292124 92 + 70235451 tGGTAACGTGCCTACTATGTGAAGTATATTATATGAACTGTGGGTTAGTTAC-ACAAATGAATGACACAAATATCTGTTTTGACAGATTTTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983499 92 - 75711847 tGGTAACGTGCCTACTATGTGAAGTATATTATATGAACTGTGGGTTAGTTAC-ACAAATGAATGACACAAATATCTGTTTTGACAGATTTTAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536007 92 - 18804593 tGGTAATGTGCCTACTATGTGAAGTATATTATATGAACTGTGGGTTAGTTAC-ACAAATTAATGACACAAATATCTGTTTTGACAGATTTTAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153034 92 + 18905526 tGGTAACATGCCTACTATGTGAAGTATATTATATGAACTGTGGGTTAGTTAC-ACAAATGAATGACACAAATATCTGTTTTGACAGATTTTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982398 92 - 72318688 TGGTAACGTGCCTACTATGTGAAGTATATTATACGAACTGTGGGTTAGTTAC-ACAAATGAATGACACAAATATCTGTTTTGACAGATTTTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316748 92 - 1517660 TTGTAACATGCCTACTATGTGAAGTATATTATATGAACTGTGGGTTAGTTAC-ACAAATGAATGACACAAATATCTGTTTTGACAGATTTTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416597 92 + 6513552 TGGTAATGTGCCTACTGTGTGAAGTATATTATATGAACTGTGGGTTAGTTAC-AAAAATGAATGACACAAATATCTGTTTTGACAGATTTTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198188 90 + 117903854 TGGTAAGGTGCCTGATATGTAAAGTATATTATATGAGCTGTGGATTGGTTAC-AAAAATAAATGACGTGA--ATCTGTTTTGACAGACTTTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388823 90 - 31320352 TGGTAAGGTGCCCGCTATGAAAAGTATATTATATGAGCTGTGGATTGGTTAC-AAAAATAAAGGGCATGA--ATCTGTTTTGACAGATTTTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578015 90 + 2203405 TGGTAAGGTGCTCACTATGTAAAGTATATTATATGAGCTGTGGATTGGTTAC-AAAAATAAATGACATGA--ATCTGTTTTGACAGATTTTAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534767 90 - 14941987 TGGTAAGGTGCCCACTAGGTAAAGTATATTATATGAGCTGGGGATTGGTTAC-AAAAATAAATAACATGA--ACCTGTTTTGACAGATTTTAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1202438 92 - 1406956 tGGTAAAGTGCCTATTATGTAAAATATACCATATGAGACATGGATCGGTTAC-AAATGTGAGTGACACAAATGTCTGTTCTGAAGGATTTTAA i proCoq1.NW_012148742v1 I 32 C 0 s otoGar3.GL873546 11194449 92 - 20685099 TGGTAAGGTGCCCATTATGTAAAATATACCTTATGAGACCTAGATTGGTTTC-AAATATAAAGGATGTAAATGTCTGTTCTAAAGAATCTTAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260077 92 - 122678785 -ttttAGGTGCCTATTAGGTAAAATGTATTGTATGGATTGTAAACTGGTTATAAAAAATGGAAGGCATAAATGTCTGTTCTGAAGAGTTTCAA i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 422533 82 - 2150887 -----AGATTCCTATTATGTGATAT---TTATATGA-CTATGGCTTGACTAC-AAAAATGAATAAAACAACT-TCTGTTTTGAAAGATGTCAA i dasNov3.JH575754 C 0 I 40 a score=4914.000000 s hg38.chr18_GL383571v1_alt 5650 2 + 198278 TT------------------------ s panTro5.chr18 64956325 2 + 78221452 TT------------------------ i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078702 2 + 77229886 TT------------------------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299632 2 + 17472758 TT------------------------ i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335837 2 - 152096393 TT------------------------ i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292216 2 + 70235451 TT------------------------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983591 2 - 75711847 TT------------------------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536099 2 - 18804593 TT------------------------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153126 2 + 18905526 TT------------------------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982490 2 - 72318688 TT------------------------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316840 2 - 1517660 TT------------------------ i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416689 2 + 6513552 TT------------------------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198278 2 + 117903854 TT------------------------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388913 2 - 31320352 TT------------------------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578105 2 + 2203405 TT------------------------ i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534857 2 - 14941987 TT------------------------ i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1202530 2 - 1406956 TT------------------------ i proCoq1.NW_012148742v1 C 0 I 40 s otoGar3.GL873546 11194541 2 - 20685099 TT------------------------ i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260169 26 - 122678785 CAGACCCCCAAGTTTGGGAAAATATT i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 422615 40 - 2150887 I a score=106217.000000 s hg38.chr18_GL383571v1_alt 5652 12 + 198278 CACCata------ttcat--- s panTro5.chr18 64956327 12 + 78221452 CACCata------ttcat--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078704 12 + 77229886 CACCata------ttcat--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299634 12 + 17472758 CACCATA------TTCAT--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335839 12 - 152096393 CACTATA------CTCAT--- i nomLeu3.chr4 C 0 I 1 s rheMac8.chr18 57292218 12 + 70235451 AACTATA------TTCAT--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983593 12 - 75711847 AACTATA------TTCAT--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536101 12 - 18804593 AACTATA------TTCAT--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153128 12 + 18905526 AACTATA------TTCAT--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982492 12 - 72318688 AACTATA------TTCAT--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316842 12 - 1517660 AACTATA------TTCAT--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416691 12 + 6513552 AACTATA------TTCAT--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198280 12 + 117903854 CACTATA------CTCAT--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388915 12 - 31320352 CACTATA------CTCAT--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578107 12 + 2203405 CACTATA------CTTAT--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534859 12 - 14941987 CACTATA------CTCAT--- i aotNan1.NW_018502140v1 C 0 I 1 s otoGar3.GL873546 11194543 12 - 20685099 TACTGTG------TCTAT--- i otoGar3.GL873546 C 0 I 3 s canFam3.chr1 112260195 21 - 122678785 AGCCATATTATTGTTCATGGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e dasNov3.JH575754 422615 40 - 2150887 I a score=132406.000000 s hg38.chr18_GL383571v1_alt 5664 14 + 198278 aaaaaaataagaat s panTro5.chr18 64956339 14 + 78221452 aaaaaaataagaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078716 14 + 77229886 aaaaaaataagaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299646 14 + 17472758 GAAAAAATAAGAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335852 14 - 152096393 AAAAAAATAAGAAT i nomLeu3.chr4 I 1 C 0 s rheMac8.chr18 57292230 14 + 70235451 AAAAAAATAAGAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983605 14 - 75711847 AAAAAAATAAGAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536113 14 - 18804593 AAAAAAATAAGAAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153140 14 + 18905526 AAAAAAATAAGAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982504 14 - 72318688 AAAAAAATAAGAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316854 14 - 1517660 AAAGAAATAAGAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416703 14 + 6513552 AGAAAAATAAGAAC i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1578119 13 + 2203405 -AAAAAATAAGAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534872 14 - 14941987 AAAAAAATAAGAAT i aotNan1.NW_018502140v1 I 1 C 0 s otoGar3.GL873546 11194558 14 - 20685099 AAAAGAATAAAAAT i otoGar3.GL873546 I 3 I 45 s canFam3.chr1 112260216 14 - 122678785 AAAATAATAAGAAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e calJac3.chr13 105198292 0 + 117903854 C e dasNov3.JH575754 422615 40 - 2150887 I e saiBol1.JH378121 19388927 0 - 31320352 C a score=19110.000000 s hg38.chr18_GL383571v1_alt 5678 2 + 198278 tt s panTro5.chr18 64956353 2 + 78221452 tt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078730 2 + 77229886 tt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299660 2 + 17472758 TT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335866 2 - 152096393 TT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292244 2 + 70235451 TT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983619 2 - 75711847 TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536127 2 - 18804593 TT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153154 2 + 18905526 TT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982518 2 - 72318688 TT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316868 2 - 1517660 TT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416717 2 + 6513552 TT i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1578132 2 + 2203405 TT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534886 2 - 14941987 TT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112260230 2 - 122678785 TT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e calJac3.chr13 105198292 0 + 117903854 C e dasNov3.JH575754 422615 40 - 2150887 I e otoGar3.GL873546 11194572 45 - 20685099 I e saiBol1.JH378121 19388927 0 - 31320352 C a score=1500.000000 s hg38.chr18_GL383571v1_alt 5680 1 + 198278 c s panTro5.chr18 64956355 1 + 78221452 c i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078732 1 + 77229886 c i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299662 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335868 1 - 152096393 C i nomLeu3.chr4 C 0 C 0 s canFam3.chr1 112260232 1 - 122678785 C i canFam3.chr1 C 0 I 1 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e calJac3.chr13 105198292 0 + 117903854 C e dasNov3.JH575754 422615 40 - 2150887 I e otoGar3.GL873546 11194572 45 - 20685099 I e aotNan1.NW_018502140v1 3534888 0 - 14941987 C e cebCap1.NW_016107689v1 1578134 0 + 2203405 C e saiBol1.JH378121 19388927 0 - 31320352 C e colAng1.NW_012115433v1 3416719 0 + 6513552 C e manLeu1.NW_012106698v1 316870 0 - 1517660 C e chlSab2.chr18 59982520 0 - 72318688 C e cerAty1.NW_012001075v1 13153156 0 + 18905526 C e macNem1.NW_012016688v1 13536129 0 - 18804593 C e macFas5.chr18 62983621 0 - 75711847 C e rheMac8.chr18 57292246 0 + 70235451 C a score=257034.000000 s hg38.chr18_GL383571v1_alt 5681 293 + 198278 actgggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcacgaggtcaggagatcgaaaccatcctgactaacacggtgaaactccgtctgtactaaaaaaatacaaaaaaattagccaggcgtggtggcgggtgcctgtagtcccagctactccggaggctgaggcaggagaatggcctgaacctgggaggcggagcttgcagtgagccaagatcgcgccactgcacactagcctgggggacagagcgagactccatctc-aaaaataata s panTro5.chr18 64956356 293 + 78221452 accgggtggggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcacgaggtcaggagatcgaaaccatcctgactaacacggtgaaactccgtctctactaaaaaaatacaaaaaaaatagccaggcgtggtggcgggcgcctgtagtcccagctactccggaggctgaggcaggagaatggcctgagcctgggaggcggagcttgcagtgagccaagatcgtgccactgcacaccagcctgggggacagagcgagactccgtctc-aaaaataata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64078733 293 + 77229886 accgggtggggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcacgaggtcaggagatcgaaaccatcctgactaacacggtgaaactccgtctctactaaaaaaatacaaaaaaaatagccaggcgtggtggcgggcgcctgtagtcccagctactccggaggctgaggcaggagaatggcctgagcctgggaggcggagcttgcagtgagccaagatcgcgccactgcacaccagcctgggggacagagcgagactccgtctc-aaaaataata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299663 293 + 17472758 Accgggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcacgaggtcaggagatcgaaaccatcctgactaatacggtgaaactccgtatctactgaaaaaatacaaaaaaattagccaggcgtggtggcgggcgcctgtagccccagctactccagaggctgaggcaggagaatggcctgaacctgggaggcggagcttgcagtgagccaagatcgcgccactgcacactagcctggggcacagagcgagactccgtctc-aaaaataata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139335869 294 - 152096393 Actgggtgtggtggctcacgcctgtaatcccagcacttttggaggctgaggtggacagatcacgaggttaggagatcgaaaccatcctgactaacacggcgaaactctgtctatactaaaaaaatacaaaaaaattagccgggcatggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggtggagcttgcagtgagccaagatcacgccactgcactccagcctgagggacagagcaagactctgtctcaaaaaataaaa i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e calJac3.chr13 105198292 0 + 117903854 C e dasNov3.JH575754 422615 40 - 2150887 I e canFam3.chr1 112260233 1 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e aotNan1.NW_018502140v1 3534888 0 - 14941987 C e cebCap1.NW_016107689v1 1578134 0 + 2203405 C e saiBol1.JH378121 19388927 0 - 31320352 C e colAng1.NW_012115433v1 3416719 0 + 6513552 C e manLeu1.NW_012106698v1 316870 0 - 1517660 C e chlSab2.chr18 59982520 0 - 72318688 C e cerAty1.NW_012001075v1 13153156 0 + 18905526 C e macNem1.NW_012016688v1 13536129 0 - 18804593 C e macFas5.chr18 62983621 0 - 75711847 C e rheMac8.chr18 57292246 0 + 70235451 C a score=-2516.000000 s hg38.chr18_GL383571v1_alt 5974 7 + 198278 ata----------------------------------------gtaa s panTro5.chr18 64956649 47 + 78221452 ataataataatGAGACTCCGTCTCaataataataataataatagtaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079026 13 + 77229886 ata----------------------------------ataatagtaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299956 16 + 17472758 ata-------------------------------ataataatagtaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336163 7 - 152096393 aTA----------------------------------------ATAA i nomLeu3.chr4 C 0 I 106 s dasNov3.JH575754 422655 7 - 2150887 ----------------------------------------ATGGTAA i dasNov3.JH575754 I 40 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e calJac3.chr13 105198292 0 + 117903854 C e canFam3.chr1 112260233 1 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e aotNan1.NW_018502140v1 3534888 0 - 14941987 C e cebCap1.NW_016107689v1 1578134 0 + 2203405 C e saiBol1.JH378121 19388927 0 - 31320352 C e colAng1.NW_012115433v1 3416719 0 + 6513552 C e manLeu1.NW_012106698v1 316870 0 - 1517660 C e chlSab2.chr18 59982520 0 - 72318688 C e cerAty1.NW_012001075v1 13153156 0 + 18905526 C e macNem1.NW_012016688v1 13536129 0 - 18804593 C e macFas5.chr18 62983621 0 - 75711847 C e rheMac8.chr18 57292246 0 + 70235451 C a score=600.000000 s hg38.chr18_GL383571v1_alt 5981 1 + 198278 c s panTro5.chr18 64956696 1 + 78221452 c i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079039 1 + 77229886 c i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299972 1 + 17472758 c i gorGor5.CYUI01014964v1 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e calJac3.chr13 105198292 0 + 117903854 C e dasNov3.JH575754 422662 0 - 2150887 C e canFam3.chr1 112260233 1 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e aotNan1.NW_018502140v1 3534888 0 - 14941987 C e cebCap1.NW_016107689v1 1578134 0 + 2203405 C e saiBol1.JH378121 19388927 0 - 31320352 C e colAng1.NW_012115433v1 3416719 0 + 6513552 C e manLeu1.NW_012106698v1 316870 0 - 1517660 C e chlSab2.chr18 59982520 0 - 72318688 C e cerAty1.NW_012001075v1 13153156 0 + 18905526 C e macNem1.NW_012016688v1 13536129 0 - 18804593 C e macFas5.chr18 62983621 0 - 75711847 C e rheMac8.chr18 57292246 0 + 70235451 C e nomLeu3.chr4 139336170 106 - 152096393 I a score=1820.000000 s hg38.chr18_GL383571v1_alt 5982 2 + 198278 aa s panTro5.chr18 64956697 2 + 78221452 aa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079040 2 + 77229886 aa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299973 2 + 17472758 aa i gorGor5.CYUI01014964v1 C 0 C 0 s calJac3.chr13 105198292 2 + 117903854 AA i calJac3.chr13 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e dasNov3.JH575754 422662 0 - 2150887 C e canFam3.chr1 112260233 1 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e aotNan1.NW_018502140v1 3534888 0 - 14941987 C e cebCap1.NW_016107689v1 1578134 0 + 2203405 C e saiBol1.JH378121 19388927 0 - 31320352 C e colAng1.NW_012115433v1 3416719 0 + 6513552 C e manLeu1.NW_012106698v1 316870 0 - 1517660 C e chlSab2.chr18 59982520 0 - 72318688 C e cerAty1.NW_012001075v1 13153156 0 + 18905526 C e macNem1.NW_012016688v1 13536129 0 - 18804593 C e macFas5.chr18 62983621 0 - 75711847 C e rheMac8.chr18 57292246 0 + 70235451 C e nomLeu3.chr4 139336170 106 - 152096393 I a score=22956.000000 s hg38.chr18_GL383571v1_alt 5984 15 + 198278 taataataagaatTG s panTro5.chr18 64956699 15 + 78221452 taataataaGAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079042 15 + 77229886 taataataagaatTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299975 15 + 17472758 taataataaGAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s calJac3.chr13 105198294 15 + 117903854 AAAAAATAAGAACTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388927 15 - 31320352 TAAAAATAAGAATTT i saiBol1.JH378121 C 0 C 0 s dasNov3.JH575754 422662 14 - 2150887 -AATAATAAGAATTT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e canFam3.chr1 112260233 1 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e aotNan1.NW_018502140v1 3534888 0 - 14941987 C e cebCap1.NW_016107689v1 1578134 0 + 2203405 C e colAng1.NW_012115433v1 3416719 0 + 6513552 C e manLeu1.NW_012106698v1 316870 0 - 1517660 C e chlSab2.chr18 59982520 0 - 72318688 C e cerAty1.NW_012001075v1 13153156 0 + 18905526 C e macNem1.NW_012016688v1 13536129 0 - 18804593 C e macFas5.chr18 62983621 0 - 75711847 C e rheMac8.chr18 57292246 0 + 70235451 C e nomLeu3.chr4 139336170 106 - 152096393 I a score=1674.000000 s hg38.chr18_GL383571v1_alt 5999 1 + 198278 C s panTro5.chr18 64956714 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079057 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299990 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292246 1 + 70235451 C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983621 1 - 75711847 C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536129 1 - 18804593 C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153156 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982520 1 - 72318688 C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316870 1 - 1517660 C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416719 1 + 6513552 C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198309 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388942 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578134 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534888 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 422676 1 - 2150887 C i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e canFam3.chr1 112260233 1 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e nomLeu3.chr4 139336170 106 - 152096393 I a score=72962.000000 s hg38.chr18_GL383571v1_alt 6000 7 + 198278 TTTTCCA- s panTro5.chr18 64956715 7 + 78221452 TTTTCCA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079058 7 + 77229886 TTTTCCA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299991 7 + 17472758 TTTTCCA- i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292247 7 + 70235451 TTTTCCA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983622 7 - 75711847 TTTTCCA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536130 7 - 18804593 TTTTCCA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153157 7 + 18905526 TTTTCCA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982521 7 - 72318688 TTTTCCA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316871 7 - 1517660 TTTTCCA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416720 7 + 6513552 TTTTCCA- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198310 7 + 117903854 TTTTCCA- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388943 7 - 31320352 TTTTCCA- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578135 7 + 2203405 TTTTCCA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534889 7 - 14941987 TTTTCCA- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112260234 7 - 122678785 TTCCCCA- i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 422677 7 - 2150887 -TCCCCAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1202532 40 - 1406956 I e otoGar3.GL873546 11194572 45 - 20685099 I e nomLeu3.chr4 139336170 106 - 152096393 I a score=340172.000000 s hg38.chr18_GL383571v1_alt 6007 31 + 198278 -AACATGTTGATG--TTTACTGTGGG-AGCATATT s panTro5.chr18 64956722 31 + 78221452 -AACATGTTGATG--TTTACTGTGGG-AGCATATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079065 31 + 77229886 -AACATGTTGATG--TTTACTGTGGG-AGCATATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5299998 31 + 17472758 -AACATGTTGATG--TTTACTGTGGG-AGCATATT i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292254 33 + 70235451 -AACATGTTGATGTGTTTACTGTGGG-AGCATATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983629 33 - 75711847 -AACATGTTGATGTGTTTACCGTGGG-AGCATAtt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536137 33 - 18804593 -AACATGTTGATGTGTTTACTGTGGG-AGCATAtt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153164 33 + 18905526 -AACATGTTGATGTGTTTACTGTGGG-AGCATATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982528 33 - 72318688 -AACATGTTGATGTGTTTACTGTGGG-AGCATATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316878 33 - 1517660 -AACATGTTGATGTGTTTACTGTGGG-AGCATAtt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416727 33 + 6513552 -AACATGTTGATGTTTTTACTGTGGG-AGCATAtt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198317 31 + 117903854 -AACACTTTGGTG--TTTACTGTGGG-AGCCTATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388950 31 - 31320352 -AGCACACTGATG--TTTACTGTGGG-AGCTTACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578142 31 + 2203405 -AACACATTGATG--TTTACTGTGGG-AGCTTATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534896 31 - 14941987 -AACACGTTGATA--TTTACTGTGGG-AGCTTATT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1202572 31 - 1406956 -AACATGTTGATT--TTTACTGTGGG-AGCTTATT i proCoq1.NW_012148742v1 I 40 I 44 s canFam3.chr1 112260241 32 - 122678785 -AACATGTTAATT--TTTACTATGGGAAACTTATT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 422684 32 - 2150887 AAACATGCTGATT--TTTACTGTGGG-AATTTATT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11194572 45 - 20685099 I e nomLeu3.chr4 139336170 106 - 152096393 I a score=53024.000000 s hg38.chr18_GL383571v1_alt 6038 5 + 198278 GTTAT s panTro5.chr18 64956753 5 + 78221452 GTTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079096 5 + 77229886 GTTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300029 5 + 17472758 GTTAT i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292287 5 + 70235451 GTTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983662 5 - 75711847 gttat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536170 5 - 18804593 gttat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153197 5 + 18905526 GTTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982561 5 - 72318688 GTTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316911 5 - 1517660 gttat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416760 5 + 6513552 gttat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198348 5 + 117903854 GTTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388981 5 - 31320352 GTTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578173 5 + 2203405 GTTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534927 5 - 14941987 GTTAT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112260273 5 - 122678785 TCTAT i canFam3.chr1 C 0 I 4 s dasNov3.JH575754 422716 5 - 2150887 TCTAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e otoGar3.GL873546 11194572 45 - 20685099 I e nomLeu3.chr4 139336170 106 - 152096393 I a score=112640.000000 s hg38.chr18_GL383571v1_alt 6043 12 + 198278 TTACAAGTTCAT s panTro5.chr18 64956758 12 + 78221452 TTACAAGTTCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079101 12 + 77229886 TTACAAGTTCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300034 12 + 17472758 TTACAAGTTCAT i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292292 12 + 70235451 TTATGAGTTCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983667 12 - 75711847 ttatgagttcat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536175 12 - 18804593 ttatgagttcat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153202 12 + 18905526 TTATGAGTTCAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982566 12 - 72318688 TTATGAGTTCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316916 12 - 1517660 ttatgagttcat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416765 12 + 6513552 ttatgaattcat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105198353 12 + 117903854 TTACAAGTTCAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388986 12 - 31320352 TTACAAGTTCAt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578178 12 + 2203405 TTACAAGTTCAt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534932 12 - 14941987 TTACAAGTTCAT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 422721 12 - 2150887 TTATAAACTCAT i dasNov3.JH575754 C 0 I 15 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e canFam3.chr1 112260278 4 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e nomLeu3.chr4 139336170 106 - 152096393 I a score=148797.000000 s hg38.chr18_GL383571v1_alt 6055 25 + 198278 TTTACTTTATTAtttatttatttat s panTro5.chr18 64956770 25 + 78221452 TTTACTTTATTAtttatttatttat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079113 25 + 77229886 TTTACTTTATTAtttatttatttat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300046 25 + 17472758 TTTACTTTATTAtttatttatttat i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292304 25 + 70235451 TATATTTTATTTTTTAATTATTTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983679 25 - 75711847 tatattttattttttaattatttat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536187 25 - 18804593 tatattttattttttaattatttat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153214 25 + 18905526 TACATTTTATATTTTAATTATTTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982578 25 - 72318688 TATAttttattttttatttatttat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316928 25 - 1517660 tatattttattttttaattatttat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3416777 25 + 6513552 tatattttattttttatttatttat i colAng1.NW_012115433v1 C 0 M 905 s calJac3.chr13 105198365 24 + 117903854 tttattta-ttttttatttatttga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19388998 25 - 31320352 tttatttatttttttatttttttga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578190 25 + 2203405 tttatttatttttttatttatttga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534944 24 - 14941987 tttattta-tttttgatttatttGC i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e dasNov3.JH575754 422733 15 - 2150887 I e canFam3.chr1 112260278 4 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e nomLeu3.chr4 139336170 106 - 152096393 I a score=38461.000000 s hg38.chr18_GL383571v1_alt 6080 6 + 198278 ttattt s panTro5.chr18 64956795 6 + 78221452 ttattt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079138 6 + 77229886 ttattt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300071 6 + 17472758 ttattt i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57292329 6 + 70235451 ATAttt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983704 6 - 75711847 ATAttt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536212 6 - 18804593 ATAttt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153239 6 + 18905526 ATAttt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982603 6 - 72318688 atattt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316953 6 - 1517660 ATAttt i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198389 6 + 117903854 atcttt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389023 6 - 31320352 atattt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578215 6 + 2203405 atattt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534968 6 - 14941987 ATAttt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e dasNov3.JH575754 422733 15 - 2150887 I e canFam3.chr1 112260278 4 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M e nomLeu3.chr4 139336170 106 - 152096393 I a score=2349057.000000 s hg38.chr18_GL383571v1_alt 6086 283 + 198278 tttgagacagagtctcgctctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctgccgggttcaagcaattctcctgcctcatcctcctgaata----gctgggattacaggtgccca-caccacgcctggctaatttttggatttttagcagagacggggtttcaccatgttggccagactggtctcaaactcctgacctcagatga-ccgcccaactcagcctcccaaagtgctgggattacaggcatgagccaccatgcccagcc s panTro5.chr18 64956801 284 + 78221452 tttgagacagagtctcgctctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctgccaggttcaagcaattttcctgcctcagcctcctgaata----gctgggattacaggtgccca-caccacgcctggctaatttttggatttttagcagagacagggtttcaccatattggccagactggtctcaaactcctgacctcagatgatccgcccaactcagcctcccaaagtgctgggattacaggcatgagccaccatgcccagcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079144 283 + 77229886 tttgagacagagtctcgctctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctgccaggttcaagcaattttcctgcctcagcctcctgaata----gctgggattacaggtgccca-caccacgcctggctaatttttggatttttagcagagacagggtttcaccatattggccagactggtctcaaactcctgacctcagatgatccgcccaactcagcctcccaaagtgctggga-taaaggcatgagccaccatgcccagcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300077 283 + 17472758 tttgagacagagtctcgctctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctgccgggttcaagcaattctcctgtctcagcctcctgaata----gctgggattacaggtgccca-caccacgcctggctaatttttggatttttagcagagacggggtttcaccatgttggccagactggtctcaaactcctgacctcagatga-cctcccaactcagcctcccaaagtgctgggattacaggcatgagccaccatgcccagcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336276 284 - 152096393 tttgagacagtgtctttatctgatgcccaggctggaatgcagtggtgtgatcttggctcactgcaacctccacctgccgggttcaagaagtgctcccgcctcagcctccccagta----gctgggattacaggtgccca-caccatgcctggctaatttttggatttttagtagagacagggtttcaccatgttggccagactggtctcaaactcctgacctcaagtgatctccccaactcagcctcccaaagtgctgggattacaagcatgagccaccatgcccagcT i nomLeu3.chr4 I 106 C 0 s rheMac8.chr18 57292335 284 + 70235451 tttgagacagagtctcactctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcagcctccacctgctggattcaagcaatttgcctgcctcagcctcctgagta----gctgggattacaggtgctgg-caccacgcctggctaattttcggatttttagcagagacggggtttcaccatgttggcaaggctggtctcgaactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctggcattacaggcatgagccaccatgcccggcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983710 284 - 75711847 tttgagacagagtctcactctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcagcctccacctgctggattcaagcaatttgcctgcctcagcctcctgagta----gctgggattacaggtgctgg-caccacgcctggctaattttcggatttttagcagagacggggtttcaccatgttggcaaggctggtctcgaactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctggcattacaggcatgagccaccatgcccggcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536218 284 - 18804593 tttgagacagagtctcactctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcagcctccacctgctggattcaagcaatttgcctgcctcagcctcctgagta----gctgggattacaggtgctgg-caccacgcctggctaattttcggatttttagcagagacgaggtttcaccatgttggcaaggctggtctcgaactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctggcattacaggcatgagccaccatgcccggcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153245 284 + 18905526 tttgagacagagtctcactctgatgcccaggctggagtgcagtggtgtgatcttggctcactgcagcctccacctgctggattcaagcaatttgcctgcctcagcctcctgagta----gctgggattacaggtgctgg-caccacgcctggctaattttcggatttttagcagagacggggtttcaccatgttggcaaggctggtctcgaactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctggcattacaggcatgagccaccatgcccggcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982609 283 - 72318688 tttgggacagagtctcacgctgatgcccaggctgtagtacagtggtgtggtc-tggctcactgcagcctccgcctgctggattcaagcaatttgcctgcctcagcctcctgagta----gctgggattacaggtactgg-caccacgcctggctaatttttggatttttagcagagacggggtttcaccatgttggcaaggctggtcttggactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctggcattacaggcatgagccaccatgcccggcG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 316959 283 - 1517660 tttgagacagagtctcactctgatgcccaggctggagtgcagtggtgtgatc-tggctcactgcagcctccacctgctggattcaagcaatttgcctgcctcagcctcctgagta----gctgggattacaggtgctgg-caccacgcctggctaatttttggatttttagcagagacggggtttcaccatgttggcaaggctggtctcaaactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctggcattacaggcatgagccaccatgcccggcc i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198395 285 + 117903854 tttgagacacagtctcactgtgacacccaggctggagtgcagtggtgcgatctcagcttattgcaacctccacctgctgggttcaagcaattattctgcctcagcctctcgagta----gctggaattacaggtgcccaccaccatgtcaggctgatttttgaatttttagttaagacaaggtttcaccatgttggccaggctggtcttgaactcctgaccacaggtgatccgcccaactcagcctcccaaagtgctgggattacaggcatgtgccaccgcacccagcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389029 289 - 31320352 tttgagacagattctcactgtgacacccaggctggagtgcagtggtacaatctcggctcattgcaacctccacctgctgggttcaagcaattattctgcctcagcctctcaagtacctggatggaaatacaggtgcccaccaccatgtcaggctgattttggaatttttagcaaagacaaggtttcaccatgttggccaggctagtcttgaactcctgacctcaggtgatctgcccaactcagcctcccaaagtgctgggattacaggcatgtgccagtgcacccagcc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578221 285 + 2203405 tttgagacagagtcttgctgtgacacccaggctggagtgcagtggtgcaatctcagctcattgcaacctccacctgctgggttcaagcaattattctgcctcagcctctcaagta----gctggaattacaggtgcccaccaccatgtcaggctgatttttgaatttttagcaaagacaaggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccaactcagcctcccaaagtgctgggattacaggcatgtgccaccgcgcccagcc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3534974 267 - 14941987 tttgagacagagtcttgctgtgacacccaggctggagagcagtggtgcgatcttggctaattgcaacctctacctgctgggttcaagcaattattctgcctcagcctcttgagta----gctggaattacaggtgcccaccaccatgtcaggctgatttttgaatttttagtaaagacaaggtttcaccatgttggccaggctggtcttgaactcctg------------------aactcaaactcccaaagtgctgggattacaggcatgtgccagcgtgcccagcc i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e dasNov3.JH575754 422733 15 - 2150887 I e canFam3.chr1 112260278 4 - 122678785 I e otoGar3.GL873546 11194572 45 - 20685099 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=115387.000000 s hg38.chr18_GL383571v1_alt 6369 13 + 198278 ATGAGTTCAT-TTT s panTro5.chr18 64957085 13 + 78221452 ATGAGTTCAC-TTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079427 13 + 77229886 ATGAGTTCAC-TTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300360 13 + 17472758 ATGAGTTCAT-TTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336560 13 - 152096393 ATGAGTTCAT-TTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292619 13 + 70235451 ATTAGTTCAT-TTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62983994 13 - 75711847 ATTAGTTCAT-TTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536502 13 - 18804593 ATTAGTTCAT-TTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153529 13 + 18905526 ATTAGTTCAT-TTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982892 13 - 72318688 ATTAGTTCAT-TTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317242 13 - 1517660 ATTAGTTCAT-TTT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198680 13 + 117903854 ATGAGTTCAT-TTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389318 13 - 31320352 ATGAGTTCAT-TTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578506 13 + 2203405 ATGAGTTCAT-TTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535241 13 - 14941987 ATGAGTTCAT-TTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11194617 14 - 20685099 ATTAGTTCATAGAT i otoGar3.GL873546 I 45 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e dasNov3.JH575754 422733 15 - 2150887 I e canFam3.chr1 112260278 4 - 122678785 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=142860.000000 s hg38.chr18_GL383571v1_alt 6382 13 + 198278 AAAAATACAAGAT s panTro5.chr18 64957098 13 + 78221452 AAAAATACAAGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079440 13 + 77229886 AAAAATACAAGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300373 13 + 17472758 AAAAATACAAGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336573 13 - 152096393 AAAAATACAAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292632 13 + 70235451 AAAAATACAAGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984007 13 - 75711847 AAAAATACAAGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536515 13 - 18804593 AAAAATACAAGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153542 13 + 18905526 AAAAATACAAGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982905 13 - 72318688 AAAAATACAAGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317255 13 - 1517660 AAAAATACAAGAT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198693 13 + 117903854 GAAAATACAAGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389331 13 - 31320352 GAAAATACAAGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578519 13 + 2203405 GAAAATACAAGAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535254 13 - 14941987 GAAAATACAAGGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11194631 13 - 20685099 CAAAATACAAGAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260282 13 - 122678785 AAAAATACAGAAT i canFam3.chr1 I 4 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e dasNov3.JH575754 422733 15 - 2150887 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=49548.000000 s hg38.chr18_GL383571v1_alt 6395 10 + 198278 ATCATTTTGT s panTro5.chr18 64957111 10 + 78221452 ATCATTTTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079453 10 + 77229886 ATCATTTTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300386 10 + 17472758 ATCATTTTGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336586 9 - 152096393 ATCATTTT-T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292645 10 + 70235451 ACGATTTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984020 10 - 75711847 ACCATTTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536528 10 - 18804593 ACCATTTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153555 10 + 18905526 ATCATTTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982918 10 - 72318688 ATCATTTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317268 10 - 1517660 ATCATTTTTT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198706 9 + 117903854 ATC-TTTTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389344 9 - 31320352 ATC-TTTTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578532 9 + 2203405 ATC-TTTTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535267 9 - 14941987 ATC-TTTTTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11194644 9 - 20685099 GTCTTTTTT- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260295 10 - 122678785 GTCTTTTTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 422748 10 - 2150887 ATGGTTTTTA i dasNov3.JH575754 I 15 C 0 e proCoq1.NW_012148742v1 1202603 44 - 1406956 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=831002.000000 s hg38.chr18_GL383571v1_alt 6405 64 + 198278 ATGCATTTAATTTGCAAGCTTTACCTTAATCATATGTTCT-----ACCAAATATTTACTAATATCAACA s panTro5.chr18 64957121 64 + 78221452 ATGCATTTAATTTGCAAGCTTTACCTTAATCATATGTTCT-----ACCAAATATTTACTAATATGAACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079463 64 + 77229886 ATGCATTTAATTTGCAAGCTTTACCTTAATCATATGTTCT-----ACCAAATATTTACTAATATGAACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300396 64 + 17472758 ATGCATTTAATTTGCAAGCTTTACCTTAATCATATGTTCT-----ACCAAATATTTAGTAATATCAACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336595 64 - 152096393 ATGCATTTAATTTGCAAGCTTTACCTTAATTATATGTTCT-----ACCAAATATTTACTAATATCAACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292655 64 + 70235451 ATGCATTTAATTTGCAAGCCTTACCTTAATCATATGTTCT-----ACCAAATCTTTACTAATATCAACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984030 64 - 75711847 ATGCATTTAATTTGCAAGCCTTACCTTAATCATATGTTCT-----ACCAAATCTTTACTAATATCAACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536538 64 - 18804593 ATGCATTTAATTTGCAAGCCTTACCTTAATCATATGTTCT-----ACCAAATCTTTACTAATATCAACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153565 64 + 18905526 ATGCATTTAATTTGCAAGCCTTACCTTAATCATATATTCT-----ACCAAATCTTTACTAATATCAACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982928 64 - 72318688 ATGCATTTAATTTGCAAGCCTTACCTTAATCATATGTTCT-----ACCAAATCTTTACTAATATCAACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317278 64 - 1517660 ATGCATTTAATTTGCAAGCCTTACCTTAATCATATGTTCT-----ACCAAATCTTTACTAATATCAACA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198715 64 + 117903854 ATGTAGTTAATTTGCAAGCTTTACCTTAATCATATGTTCT-----ACCAAATATTTACTAATATCAACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389353 64 - 31320352 ATGTAGTTAATTTGCACGCTTTATCTTAATCATATGTTCT-----ACCAAATATTTACTAATATCAACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578541 64 + 2203405 ATGTAGTTAATTTGCAAGCTTTACCTTAATCATATGTTCT-----ACCAAATATTTACTAATATCAACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535276 64 - 14941987 ATGTAATTAATTTGCAAGCTTTACCTTAATAATATGTTCT-----ATCAAATATTTACTGGTATCAACA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1202647 62 - 1406956 ATGCATTTAATTTGCAAGCTT--TCTTAATCATAAGTTCG-----ATCAAATCTTTACTAATATCAACA i proCoq1.NW_012148742v1 I 44 I 101 s otoGar3.GL873546 11194653 64 - 20685099 ATGCATTTAACGTGCAAGCTTTATCTTAAACATATATCCC-----ATCAAATCTTTACTAACGCTAACA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260305 64 - 122678785 ATGCATTTAATTTGCAAGCATTAGCTTAATTATATGTTCA-----ATTAAATCTTTACTAATACCAATA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 422758 69 - 2150887 ATGCACTTAATTTGCAAAGTTCATCTTAATCATATGTTCTGTTAAACCAAGTCTTCACCGATATTGGCA i dasNov3.JH575754 C 0 C 0 e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=997749.000000 s hg38.chr18_GL383571v1_alt 6469 116 + 198278 ACATTTATATCCAACAATTTATATCCATTGTTGGATATAAATGTTCACATTTCATATCCAG-TAACTGAAATGCATAATCAGATTTAGCTACGATGGAATGTC-TGTTGATTCACTAG s panTro5.chr18 64957185 116 + 78221452 ACATTTATATTCAACAATTTATATCCATTGTTGGATATAAATGTTCACATTTTATATCCAG-TAACTGAAATGCATAATCAGATTTAGCTACGATGGAATGTC-TGTTGATTCACTGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079527 116 + 77229886 ACATTTATATTCAACAATTTATATCCATTGTTGGATATAAATGTTCACATTTTATATCCAG-TAACTGAAATGCATAATCAGATTTAGCTACGATGGAATGTC-TGTTGATTCACTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300460 108 + 17472758 ACATTTATATCCAACAATTTATATCCATTGTTGGATATAAATGTTCACATTTCATATCCAG-TAA--------CATAATCAGATTTAGCTACGATGGAATGTC-TGTTGATTCACTGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336659 116 - 152096393 ACATTTATATTCAACAATTTATATCCATTGTTGGATATAGATGTTCACATTTTATATTCAG-TAACTGGAATGCATAATCAGATTTAGCTATGGTGGAATGTC-TGTTGATTCACTGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292719 116 + 70235451 ATATTTGTATTCAACAATTTATATCCATTTTTGGGTATAAATGTTCACATTTTATATCCAG-TAACCGAAATGCATGATCAGATTTAGCTATGATGGAATGTC-TGTTAAGTCATTGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984094 116 - 75711847 ATATTTGTATTCAACAATTTATATCCATTTTTGGGTATAAATGTTCACATTTTATATCCAG-TAACCGAAATGCATGATCAGATTTAGCTATGATGGAATGTC-TGTTAAGTCATTGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536602 116 - 18804593 ATATTTGTATTCAACAATTTATATCCATTTTTGGGTATAAATGTTCACATTTTATATCCAG-TAACCGAAATGCATGATCAGATTTAGCTATGATGGAATGTC-TGTTAAGTCATTGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153629 116 + 18905526 ACATTTGTATTCAACAATTTATATCCATTTTTGGGTATAAATGTTCACATTTTATATCCAG-TAACCGAAATGCATGATCAGATTTAGCTATGATGGAATGTC-TGTTAAGTCATTGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59982992 116 - 72318688 ACATTTGTATTCAATAATTTACATCCATTTTTGGGTATAAATGTTCACATTTTATATCCAG-TAACCGAAATGCATGATCAGATTTAGCTATGATGGAATGTC-TGTTAAGTCATTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317342 116 - 1517660 ACATTTGTATTCAACAATTTATATCCATTTTTGGGTATAAATGTTCACATTTTATATCCAG-TAACCGAAATGCATGATCAGATTTAGCTATGATGGAATGTC-TGTTAAGTCATTGG i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198779 116 + 117903854 ACATTTATATCCAACAATGAATAAAAATTGTTGGATATAAATGTTCACATTTTATATCCAG-TAACTGAAATGCATAATCAGATTTATCTATGATGGAATGTC-TGTTGATTCATTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389417 85 - 31320352 ACATTTATACCCAACAATGGATAAAAATTGTTGGATATAAATGTTCACATTTTATATCCAG-TAACTGAAATGCA--------------------------------TGATTCATTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578605 116 + 2203405 ACATTTATATCCAACAATGGATACAAATTTTTGGATATAAATGTTCACATTTTATATCCAG-TAACTGAAATGCATTATCAGATTTAGCTATGATGGAATGTC-TGTTGATTCATTGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535340 116 - 14941987 ACATTTATATCCAACAATGGATAAAAATTTTTGGATATAAATGTTCACATTTTATATCCAG-TAACTGAAATGCATAATCAGATTTAGCTGTGATGGAATATC-TGTTGATTCATTGG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11194717 101 - 20685099 -----------GCACTATCTCTACAAATCTC----TACGCATGTTTATACCTTGCATTTGA-TTACTTGCGTGCATAATTAGATGTAGATGTGACATCATGCT-TGTTGATTCCTTGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260369 103 - 122678785 ----------GCAATGATTTA-GTAAATCTC----TATAAATGTTCACACGTTATATCCAATTAGCTAAAATGCATAATTAAATCTGGATATGATGTAATGCCTTGTTGATTCATTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 422827 98 - 2150887 GCAGTGACAGTTAA--------ATCACTT--------CAAATGCTCACACACT-TAGCCAA-GTACCTAACAGTATAATTAGATTTAAAAGTGATGTAGCA-C-TGTTGATTCACTGA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1202709 101 - 1406956 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=3313788.000000 s hg38.chr18_GL383571v1_alt 6585 295 + 198278 ACCAGGCATGGAAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAACTGTACCTCTAAGTTGCTATAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAAGAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATATTGTAAAGCTGTTTCATT s panTro5.chr18 64957301 293 + 78221452 ACCAGGCATGGAAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTACCTCTAAATTGCTATAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGA--ATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAAGAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATATTGTAAAGCTATTTCATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079643 293 + 77229886 ACCAGGCATGGAAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTACCTCTAAATTGCTATAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGA--ATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAAGAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATATTGTAAAGCTATTTCATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300568 295 + 17472758 ACCAGGCATGGAAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCATAAATTGTACCTCTAAGTTGCTATAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAAGAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATATTGTAAAGCTGTTTCATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139336775 295 - 152096393 ACCAGGCATGGAAAATTTTCTGGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTCTAAGTTGTTATAGAATCACCAGATAGCAGTAGAATTGGGAAAGAGAGAATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAAGAGAGAGATTAAT-GAATTTGGGAGCCAAACTAC-----TATAT-----TACAAAATTAATTGGTATTATAATAGAAAAATATTGTAAAGCTGTTGCATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57292835 295 + 70235451 ACCAGGCATGGGAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTCTAAGTTGCTGCAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCAACAGAAATATAAAGAAAACAAGAAATATAGCTTCGTTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAACAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATGTTGTAAAGGTGTTTCATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984210 291 - 75711847 ACCAGGCATGGGAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTCTAAGTTGCTGCAGAATCACCAGATAGCAGTAGAATCCCGAAAGAGAGAATTCAACAGAAATATAAAGAAAACAAGAAATATAGCTTCGTTTATAAAAATAGAAATCTTGTAATGAAAATAG----TAATTAGAAGAACAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATGTTGTAAAGGTGTTTCATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13536718 295 - 18804593 ACCAGGCATGGGAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTCTAAGTTGCTGCAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCAACAGAAATATAAAGAAAACAAGAAATATAGCTTCGTTTATAAAAACAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAACAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATGTTGTAAAGGTGTTTCATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13153745 295 + 18905526 ACCAGGCATGAGAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTCTAAGTTGCTGCAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCAACAGAAATATAAAGAAAACAAGAAATATAGCTTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAACAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAATGTTGTAAAGGTGTTTCATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983108 295 - 72318688 ACCAGGCATGGGAAATCTTCTAGAGAGAGAT--GTTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTTTAAGTTGCTGCAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCCACAGAAATATAAAGAAAACAAGAAATATAGCTTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAACAGAGAAATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGTAAAATGTTGTAAAAGTGTTTCATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317458 295 - 1517660 ACCAGGCATGAGAAATTTTCTAGAGAGAGAT--ATTTGTGACCTAAGCCCCCTACCCAGAAATTGTGCCTCTAAGTTGCTGCAGAATCACCAGATAGCAGTAGAATCCTGAAAGACAGAATTCAACAGAAATATAAAGAAAACAAGAAATATAGCTTCATTTATAAAAATAGAAATCTTGTAATGAAAATAGTAATTAATTAGAAGAACAGAGAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TACAAAGTTAATTGGTATTAAAATAGAAAAGTGTTGTAAAGGTGTTTCATT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105198895 288 + 117903854 ACCAGGCATGGAAAATTCTCTAGAGAGAGGT--AATTGTGGCCTACGCCCCCTAACCAGAAATCGTGCCTCTAAGTTGCTGTAGAATCACCAGATAGCAGTAGAATCCTGAAAGAGAGAATTCAATAGAAATGTCAAGAA---AAGAAATATAGCCTCACTTACAAAAATATAAATCTCCTAATGAAAATAG----TAGTTAGAGGAACAGATAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TAAAAAGTCAATTGGTATTAAAATAAAAAAATATTGTGAAGGTGTTTCatt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389502 291 - 31320352 GCCAGGCATGGAAAATTTTCTAGAGAGAGGT--AATTGTGGTCTAAGTCCCCTAACCAGAAATTGTGCCTCTAAGTTGCAGTAAAATCACCAGATAGCAGTAGAATCCTGAAACAGAGAATTCAGCAGAAATGTCAAGAAAACAAGAAATATAGCCTCACTTACAAAAATATAAATCTCCTAATGAAAATAG----TAGTTAGAGGAACAGATAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TAAAATGTCAACTAGTATTAAAATAGAAAAACACTGTAAAGGTGTTTCatt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1578721 291 + 2203405 ACCAGGCATGGAAAATTTTCTAGAGAGAGGT--AATTGTGGCCTAAGCCCCCTAACCAGAAATTGTGCCTCTAAGTTGCAGTAAAATCACCAGATAGCAGTAGAATGCTGAAACAGAGAATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCACTTACAAAAATATAAATCTCCTAATGAGAATAT----TAGTAAGAGGAAGAGATAGATTAAT-TAATTTGGGAACCAAACTGC-----TATAT-----TAAAAAGTCAATTGGTATTAAAATAGAAAAACATTGTAAAGGTGTTTCatt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535456 291 - 14941987 ACCAGGCATGGAAAATTTTCTAGAGAGAGGT--AATTGTGGCCTAAGCCCTCTAACCAGAAATTGTGCCTCTAAGTTGCTGTAGAATCACCAGATAGCAGCAGAATCCTGAGACAGATAATTCAACAGAAATGTCAAGAAAACAAGAAATATAGCCTCACTTACAAAAATATAAAAATCCTAATGAAAATAG----TAGTTAGAGGAACAGATAGATTAAT-GAATTTGGGAACCAAACTAC-----TATAT-----TAAAAAGTCAATTGGTATTAAAATAGAAAAACGTTGCAAAGGTGTTTCatt i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1202810 298 - 1406956 ACCAGGGATGGGAAATTCTCTAAAGAGAGAT--TATTATGACCCAACCCCCCTACTCGTAAATTTTGTCTCTAATTTGTTGTAGAACCATCAGACAGCAGTAGAATGCTGAAAGAGAGCATTCAACAGAAAAGCCAAGAA-ACAAGAAATACAAACTCATTTACAAAAACAGAACTCTTGTATTGAAAATAGTAGGTAATTATGGGAAGAGCTAGATTAAT-GAATTTGGGAGCCAAATTACTAAAGTACTT-----TACATAGT-AATTGGTGTTAAAATAGAGAAATATTCCAAAGGTGTTTCATT i proCoq1.NW_012148742v1 I 101 I 448 s otoGar3.GL873546 11194818 291 - 20685099 ACCAAGGATAGGAAGTTTTTTAGACAGACAT--GACTATGAGCCAA-CCCTCTACCCAGAAATGTAGCCTCTAATCTGTCGTAGGACCACCAGATAGCAGTAGAACCCTGAAAGAGAGCACTCCACAGAAATCCTGAAAG-GTAGGAAATACAGACTGATTTAT-AAAACAGAACTCTTGTATTGAAA--AAGAGTTCATTATAGGAACTGATAGGTTAAT-AAATCTAGGAGCCAGATT-------TACTT-GACATACACAGT-AGCTGGTGTTAAAATAGAAAAATATTCTGAAGGTGTTTCAGT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260472 301 - 122678785 AACAAAGATGGAAAGTTCTCTAGAAAGAGATTATATTATGGCCCAAGCCCCCCACCT-CAACTTTTGCTTATAATTCATTGTACAACCACCAGATAACAGAAGATTCTTGAAGGAGAGCTCTCAACAAAAATGCCAAGAAAATAAGTAATATAGTATCATTTATATAAAGAAAACTCTCATATTGAAAATAGTAGTTAATTATAGGAGCAGCTAGATTAACAAAATGTGGGAATCACATGAC-----TAAATTGCTTTATAAAGT-AATTGGTGTTAAAATAGAAAAATATTCTGAAAGTATttcatt i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 422925 249 - 2150887 ACCAAGGATAGTAAACTCTCTAAAAAGAGAT--GGTTTTGCCCCAAGCTCCCCACCCAAAACTATGGCCTCTAATTCATTGTACAGCCACCAGATAGCAGTAGAGTCCTGAT-------------------------------------TAGGGCCTCAGGTATAAAAACAGAACAGCAGTATTGAAAATGATGGTAAATTATAGGAACGTCTAGAACAAC-AAATCTGGGAAC-------------TGCTT-----TACAAAAA-AATTGGTTTGGAAATAGAAAAACATTCTGAAATCATTTCACC i dasNov3.JH575754 C 0 C 0 e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=1116226.000000 s hg38.chr18_GL383571v1_alt 6880 118 + 198278 TGtccatgtattcaatacacatgtattgaacacataataggttttcagacacctctctaggccctggggaaaat-aagagcgaggcagagatgcctcctgtccacata-aatttacattt s panTro5.chr18 64957594 118 + 78221452 TGtccatgtattcaatacacatgtattgaacacataataggttttcagacacctctctaggcactggggagaat-aagagcgaggcagagatgcctcctgtccacata-aacttacattt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64079936 118 + 77229886 TGtccatgtactcaatacacatgtattgaacacataataggttttcagacacctctctaggcactggggagaat-aagagcgaggcagagatgcctcctgtccacata-aacttacattt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300863 118 + 17472758 TGtccatgtattcaatacacatgtattgaacacataataggttttcagacacctctctaggcgctggggaaaat-aagagcgaggcagagatgcctcctgtccacata-aacttacattt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337070 117 - 152096393 TGTCTatgtattcaatacacatgtattgaacacataatatgttttcagacacctttctaggcgctggggagaat-aagagcaaggcagagatgactcctgtccacat--agcttacattt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293130 119 + 70235451 TGTCTAAGTattccatacacatgtatcgagcacataatgggttttcagacacctctctaggcgctggggagagcgaacaacaaggcagagatgactcctgtccacata-agcttacattt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984501 119 - 75711847 TGTCTAAGTattccatacacatgtatcgaacacataatgggttttcagacacctctctaggcgctggggagagcgaacaacaaggcagagatgactcctgtccacata-agcttacattt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537013 119 - 18804593 TGTCTAAGTattccatacacatgtatcgaacacataatgggttttcagacacctctctaggcgctggggagagcaaacaacaaggcagagatgactcctgtccacata-agcttacattt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154040 119 + 18905526 TGTCTAAGTattccatacacatgtatcgaacacataatgggttttcagacacctctctaggcgctggggagagcgaacaacaaggcagagatgactcctgtccacata-agcttacattt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983403 119 - 72318688 TGTCTAAGTattccatacacatatatcgaacacataatgggttttcagtcacctctttaggcgctggggagagcgaacaacaaggcagagacgactcctgtccacata-agcttacattt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317753 119 - 1517660 TGTCTAAGTattccatacacgtgtatcaaacacataatgggttttcagacacctctctaggcgctggggagagcgaacaacaaggcagagatgactcctgttcacata-agcttacattt i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105199183 119 + 117903854 catccaagtattcagcacacatgtactgaacatataatgggttttcagacacctctgcaggcactggggagaatgaagaacaatgaagagatgactcctgtccacagg-agcttacattg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389793 119 - 31320352 catccaagtattcaatacacatgtactgaacacataatgggttttcagacacctctgcaggcgctggggagaatgaagaagaacgaagggatgactcctgtccacagg-agcttacattt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579012 119 + 2203405 catccaagtgttcaatacacatgtactgaacacataatgggttttcagacacctctgcaggcactggggagaatgaagaacaacgaagagatgactcctgtccacaga-agcttacattt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535747 118 - 14941987 catccaag-attcaatacacatgtactgaacacataatgggttttcagacacctctgcaggccctggggagaatgaagaacaatgaagagatgactcctgtccacagg-agcttacattt i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195109 115 - 20685099 CATTTGAATATTC-ACATATATGTATTGAACACCTAATGGGGTTTGGGGCACTTGTCTAAG----GGGGGGAATGAAGAGCAAGGCAGAGATGGCTGCTTCCCTCCGAGAGCTTGCTTTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112260773 120 - 122678785 catttaagtgttgagtaaatatgtattgaacacctaacaggtttccaggcacatccctgaggcctagggagaatgaaggacagaagagaggtggtttctcttctcctagggcttacattT i canFam3.chr1 C 0 I 421 s dasNov3.JH575754 423174 116 - 2150887 CATTAAGATattcaataaacatgttttgagcaccacttaggttttcaggcacctc-ccagcaactggggattttaaagaggaa---agaagtggctctggtcctcccggcatttacattt i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=273810.000000 s hg38.chr18_GL383571v1_alt 6998 50 + 198278 cagagtgcatgggagGGTCTGGCTG----TGTGTGTGTGTAT---------G---------------------GGGGGGGGCAT s panTro5.chr18 64957712 55 + 78221452 cagagtgtgtgggagGGTCTGGCTG----TGTATGTGTGTATCGG----GGG---------------------GGGGGGGGCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080054 53 + 77229886 cagagtgtgtgggagGGTCTGGCTG----TGTATGTGTGTATCGG------G---------------------GGGGGGGGCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5300981 49 + 17472758 cagagtgcatgggagGGTCTGGCTG----TGTGTGTGTGTAT-------------------------------GGGGGGGGCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337187 48 - 152096393 cagagtgtgtgggagGGTCTGGCTG----TGTGTGTGTGTAT--------------------------------GGGGGGAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293249 61 + 70235451 cagAgtgcgtgggagggtctggcta--tgtgtgtgtgtgtgtgtgtatgggg---------------------gtgAGGGGCGt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984620 61 - 75711847 cagAgtgcgtgggagggtctggcta--tgtgtgtgtgtgtgtgtgtatgggg---------------------gtgaggggtgt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537132 59 - 18804593 cagagtgcgtgggagGGTCTGGCGA----tgtgtgtgtgtgtgtgtatgggg---------------------gtgAGGGGCGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154159 63 + 18905526 cagAgtgcgtgggagggtctggctatgtgtgtgtgtgtgtgtgtgtatgggg---------------------gtgAGGGGCGt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983522 59 - 72318688 cagggtgcgtgggagggtctggctg----tgtgtgtgtgggggggggggggg---------------------gtgaggggCGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317872 59 - 1517660 cagAgtgcgtgggagggtctggcta----tgtgtgtgtgtgtgtgtatgggg---------------------gtgAGGGGCGT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105199302 47 + 117903854 cagaatgtgtgggagaGTCTGGCTG----TGCGTGTGTAT---------------------------------GGGTGGGGCAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389912 47 - 31320352 cagagtgtgtgggagGGTCTGTCTG----TTTGTGTGTAT---------------------------------GGGTGGGGCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579131 45 + 2203405 cagAGTGTATGGGAGGGTCTGTC------TTTGTGTGCAT---------------------------------GGGTGGGGTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535865 37 - 14941987 ca----------gagggTCCGGCTG----TGTGTGTGTAT---------------------------------GGGTGGGGCAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195224 80 - 20685099 CACCgtgtgtgtgtgtgtgtgtgtg----tgtgtatgtgtgtgAGCTGGGGGTGGGGGTATACAGGTGTGTATATGAGGGGCAT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 423290 23 - 2150887 cagggtgaatgagtggg---gggca----t------------------------------------------------------ i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e canFam3.chr1 112260893 421 - 122678785 I e colAng1.NW_012115433v1 3416802 905 + 6513552 M a score=2314838.000000 s hg38.chr18_GL383571v1_alt 7048 220 + 198278 TCATTTATTTTTAATTATTGAAGTAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAACAT-AGCAATGA-GGG-CTCTCATCTCTGTGTATGATGTTCAATCTGAGCCCTGAAAAAAAGGAAAGGAATGAGCAGAT-AAAGGGCAATGAAAGCACACCC-CACCAAGAGTGTTTTCACAGATCAGGAAGAAACAGGCCATGTGC s panTro5.chr18 64957767 217 + 78221452 TCACTTATTTttaattatttaagtaattagtaattgtaattaatGCTGCAAAGGAAATGAACAGAGTACTTGATGAAACAG-AG---TGA-GGG-CTCTCATCTCTGTGTATGATGTTCAATCTGAGCCCTGAGAAAAAGGAAAGGGATGAGCAGAT-AAAGGGCAATGAAAGCACACCC-CACCAAGAGTGTTTTCACTGATCAGGAAGCAACAGGCCATGTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080107 218 + 77229886 TCACTTATTTTTAATTATTGAAGTAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAACAGCAG---TGA-GGG-CTCTCATCTCTGTGTATGATGTTCAATCTGAGCCCTGAGAAAAAGGAAAGGGATGAGCAGAT-AAAGGGCAATGAAAGCACACCC-CACCAAGAGTGTTTTCACTGATCAGGAAGCAACAGGCCATGTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301030 213 + 17472758 TCATTTATTTTTAATTATTGAAGTAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAACAT-AGCAATGA-GGG-CTCTCATCTCTGTGTATGATGTTCAATCTGAGCCCTGAAAAAATGGAAAGGGATGAGCAGAT-AAAGGGCAATGAAAGCACATCC-CACCAAGAGTGTTTTCACAGATCAGGAAGCAACAGGC------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337235 221 - 152096393 TAATTTATTTTTAATTATTGAAGTAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAACAT-AGCAGTGA-GGG-CTCTCATCTCTGTGTATGATGTTCAATCTGAGCCCTGAAAAAAAGGAAAGGGATGAGCAGAT-AAAGGGCAATGAAAGCACATCCAAACCAAGAGTGTTTTCACTGATCAGGAAGCAACAGGCCATGTGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293310 219 + 70235451 tcatttatttttaattactgaaataattagtaattgtaattaatGCTGCAAAGGAAATGAACAGAGTACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTATGTGCATGATGTTCAATCTGAGTCCTGA-AAAAAGGAAAAGGATGATCAAAT-AAACGGCAATGAAAGCACATCC-CACCAACAGTGTTTTCACCGAGCAGGAAACAACAGGCCATGTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984681 219 - 75711847 TCATTTATTTTTAATTACTGAAATAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTATGTGCATGATGTTCAATCTGAGTCCTGA-AAAAAGGAAAAGGATGATCAAAT-AAACGGCAATGAAAGCACATCC-CACCAACAGTGTTTTCACCGAGCAGGAAACAACAGGCCATGTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537191 219 - 18804593 TCATTTATTTTTAATTACTGAAATAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTGTGTGCATGATGTTCAATCTGAGTCCTGA-AAAAAGGAAAAGGATGATCAAAT-AAACGGCAATGAAAGCACATCC-CACCAACAGTGTTTTCACCGAGCAGGAAACAACAGGCCATGTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154222 219 + 18905526 tcatttatttttaattactgaaataattagtaattgtaattaatGCTGCAAAGGAAATGAACAGAGTACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTATGTGCATGATGTTCAATCTGAGTCCTGA-AAAAAGGAAAAGGATGATCAAAT-AAACGGCAATGAAAGCACATCC-CACCAACAGTGTTTTCACCGAGCAGGAAGCAACGGGCCATGTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983581 219 - 72318688 TCACTTATTTTTAATTACTGAAATAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTATGTGCATGATGTTCAATCTGAGTCCTGA-AAAAAGGAAAAGGATGATCAAAT-AAAGGGCAATGAAAGCACATCC-CACCAACAGCATTTTCACCGAGCAGGAAGCAACAGGCCACGTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 317931 219 - 1517660 TCATTTATTTTTAATTACTGAAATAATGAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGTACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTATGTGCATGATGTTCAATCTGAGTCCTGA-AAAAAGGAAAAGGATGATCAAAT-AAACGGCAATGAAAGCACATCC-CACCAACAGTGTTTTCACCGAGCAGGAAGCAACAGGCCATGTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3417731 219 + 6513552 TCATTTATTTTTAGTTACTGAAATAATTAGTAATTGTAATTAATGCTGCAAAGGAAATGAACAGAGCACTTGATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTATGTGCACGATGTTCAATCTGAGCCCTGA-AAAAAGGAAAAGGATGATCAGAT-AAAGAGCAATGAAAGCACATCC-CACCAACAGTGTTTTCATCGAGCAGGAAGCAACAGGCCATGTGC i colAng1.NW_012115433v1 M 905 C 0 s calJac3.chr13 105199349 218 + 117903854 TCatttatttataattattaaaataattaGCAATTGTAATTAGTGCTGCAAAGGAAATGAATAGAGTAC---ATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTCCGTGCACAATGTTCAGTCTGAGCCCTGAAAACAAGGAAAGTGATGATCAGATAAAAGAGCAATGAAAGCACATCC-CACCAAGAGTGTTTTCACCCAGCAGGAAGCAACAGGCCTTAGGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19389959 216 - 31320352 TCATTCATTTCTAATTATTAAAATAATTAGTAATTGTAATTAGTGCTGCAAAGGAAATGAACAGAGTACTTAATGAAGCAT-AGCAGTGA-GGG-CTCTCATCTCTGTGCACGATGTTCAGTCTGAGCCTTGAAAACAAGGAAAGTGATGATC-----AAAGAGCAGTGAAAGCACATCC-CACCAAGAGTGTTTTCACCAAGCAGGAAGAAACAGGCCTTGGGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579176 221 + 2203405 TCATTTATTTATAATTATTAAAATAATTAGTAATTGTAATCAGTGCTGCAAAGGAAATGAACAGAGTACTTAATGAAGCAT-AGCAGTGA-GGG-CTCTCAACTCTGTGCACGATGTTCAGTCTGAGCCCTGAAAACAAGGAAATTGATGATCAGATAAAAGGGCAGTGAAAGCACATCC-CACCAAGAGTGTTTTCACTGAGCAGGAAGCAGCAGGCCTTGAGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3535902 221 - 14941987 TCATTTATTTATAATTATTAAAATAATTAGTAATTGTAATTAGTGCTGCAAAGGAAATGAACAGAGTACTTGATGAGGCAC-AGCAGTGA-GGG-CTTTCATCTCTGTGCACGATGTTCAGTCTGAGCCCTGAAAACAAGGAAAGTGATGATCAGATAAAAGAGCAATGAAAGCACATCC-CACCAAGAGTGTTTTCACCGAGCAGGAAGCAACAGGCCTTGGGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195304 218 - 20685099 TCACTTA-CAATGATTGTTCAAGTAATTACTAATTGTAATTAACACTGCAAAAGAAATGTGTAGAGTACTTGATGAGGCAT-AGCAGTGAGGGG-CTCTCTTCTCAGAGAGTGATATTTAATCTGAAGGCTGA-TAGAAGAAGAAAAAAGACCAGAT-AAAGGGTGATGATGGCATATCC-CAGCAAAAGTG-TTCCTTGGACCAGGGAGCAACAGGCCCTGCAC i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 423313 207 - 2150887 --attaatttatgactgttaaaaaaattagtaaatgtaacgaataccgcaaaggaaataagcagaagatt--------cat-ag---tga-gggcctctcatctcaaagggagttatttaatctgagacctgaaagcagagaaagagtcaaccagat-aaagagcttgggaagggtgtcc-aacaaagaagg-ttccgtggaacagaaaataagaacccttgggc i dasNov3.JH575754 C 0 I 10 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e canFam3.chr1 112260893 421 - 122678785 I a score=10920.000000 s hg38.chr18_GL383571v1_alt 7268 1 + 198278 T s panTro5.chr18 64957984 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080325 1 + 77229886 T i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139337456 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293529 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984900 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537410 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154441 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983800 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318150 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3417950 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105199567 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390175 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579397 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536123 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195522 1 - 20685099 T i otoGar3.GL873546 C 0 I 9 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C a score=15816.000000 s hg38.chr18_GL383571v1_alt 7269 7 + 198278 AGTGTGT s panTro5.chr18 64957985 5 + 78221452 AGTGT-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080326 5 + 77229886 AGTGT-- i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139337457 5 - 152096393 AGTGT-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293530 7 + 70235451 GGtatat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984901 7 - 75711847 GGtatat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537411 7 - 18804593 GGTATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154442 7 + 18905526 GGtatat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983801 7 - 72318688 GGTAtat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318151 7 - 1517660 GGTGtat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3417951 7 + 6513552 Agtatat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105199568 7 + 117903854 AAtgtgt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390176 7 - 31320352 AATGTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579398 7 + 2203405 AAtgtgt i cebCap1.NW_016107689v1 C 0 I 76 s aotNan1.NW_018502140v1 3536124 6 - 14941987 AAtgtg- i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C a score=13505.000000 s hg38.chr18_GL383571v1_alt 7276 4 + 198278 ATGt s rheMac8.chr18 57293537 4 + 70235451 atat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62984908 4 - 75711847 atat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537418 4 - 18804593 ATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154449 4 + 18905526 atat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59983808 4 - 72318688 atat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318158 4 - 1517660 atat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3417958 4 + 6513552 atat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105199575 4 + 117903854 gtgt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390183 4 - 31320352 GTGT i saiBol1.JH378121 C 0 I 105 s aotNan1.NW_018502140v1 3536130 3 - 14941987 -tgt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e nomLeu3.chr4 139337462 0 - 152096393 C e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C e panPan2.chr18 64080331 0 + 77229886 C e panTro5.chr18 64957990 0 + 78221452 C a score=7101.000000 s hg38.chr18_GL383571v1_alt 7280 5 + 198278 atata s rheMac8.chr18 57293541 5 + 70235451 atata i rheMac8.chr18 C 0 I 41 s macFas5.chr18 62984912 5 - 75711847 atata i macFas5.chr18 C 0 I 37 s macNem1.NW_012016688v1 13537422 5 - 18804593 ATATA i macNem1.NW_012016688v1 C 0 I 170 s cerAty1.NW_012001075v1 13154453 5 + 18905526 atact i cerAty1.NW_012001075v1 C 0 I 29 s chlSab2.chr18 59983812 5 - 72318688 gtact i chlSab2.chr18 C 0 I 110 s manLeu1.NW_012106698v1 318162 5 - 1517660 atact i manLeu1.NW_012106698v1 C 0 I 37 s colAng1.NW_012115433v1 3417962 5 + 6513552 atata i colAng1.NW_012115433v1 C 0 I 359 s calJac3.chr13 105199579 5 + 117903854 gtgtg i calJac3.chr13 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e aotNan1.NW_018502140v1 3536133 0 - 14941987 C e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e saiBol1.JH378121 19390187 105 - 31320352 I e nomLeu3.chr4 139337462 0 - 152096393 C e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C e panPan2.chr18 64080331 0 + 77229886 C e panTro5.chr18 64957990 0 + 78221452 C a score=14280.000000 s hg38.chr18_GL383571v1_alt 7285 12 + 198278 t--------atatatatata s nomLeu3.chr4 139337462 11 - 152096393 ---------ATACACATATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293587 12 + 70235451 t--------gtgtgtgtatg i rheMac8.chr18 I 41 C 0 s macFas5.chr18 62984954 12 - 75711847 t--------gtgtgtgtatg i macFas5.chr18 I 37 C 0 s cerAty1.NW_012001075v1 13154487 12 + 18905526 t--------gtgtgtgtgtg i cerAty1.NW_012001075v1 I 29 I 79 s manLeu1.NW_012106698v1 318204 12 - 1517660 t--------gtgtgtgtgtg i manLeu1.NW_012106698v1 I 37 I 8 s calJac3.chr13 105199584 20 + 117903854 tgtgcacgcgtgtatgtgtg i calJac3.chr13 C 0 C 0 s aotNan1.NW_018502140v1 3536133 11 - 14941987 ---------atgtgtgtgtg i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e saiBol1.JH378121 19390187 105 - 31320352 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e chlSab2.chr18 59983817 110 - 72318688 I e macNem1.NW_012016688v1 13537427 170 - 18804593 I e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C e panPan2.chr18 64080331 0 + 77229886 C e panTro5.chr18 64957990 0 + 78221452 C a score=1680.000000 s hg38.chr18_GL383571v1_alt 7297 2 + 198278 ta s nomLeu3.chr4 139337473 2 - 152096393 CA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293599 2 + 70235451 tg i rheMac8.chr18 C 0 I 6 s macFas5.chr18 62984966 2 - 75711847 tg i macFas5.chr18 C 0 I 6 s manLeu1.NW_012106698v1 318224 2 - 1517660 ta i manLeu1.NW_012106698v1 I 8 I 67 s calJac3.chr13 105199604 2 + 117903854 tg i calJac3.chr13 C 0 C 0 s aotNan1.NW_018502140v1 3536144 2 - 14941987 tg i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e saiBol1.JH378121 19390187 105 - 31320352 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e chlSab2.chr18 59983817 110 - 72318688 I e cerAty1.NW_012001075v1 13154499 79 + 18905526 I e macNem1.NW_012016688v1 13537427 170 - 18804593 I e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C e panPan2.chr18 64080331 0 + 77229886 C e panTro5.chr18 64957990 0 + 78221452 C a score=14596.000000 s hg38.chr18_GL383571v1_alt 7299 27 + 198278 tatatatata---tatatatatatatatat s panTro5.chr18 64957990 6 + 78221452 ------------------------ATATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080331 6 + 77229886 ------------------------ATATAT i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139337475 30 - 152096393 CTAGCACATGGCCTGtatatatatatatat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293607 30 + 70235451 tatatatatactgtgtgtgtgtacatatat i rheMac8.chr18 I 6 C 0 s macFas5.chr18 62984974 30 - 75711847 tatatatatactgtgtgtgtgtacatatat i macFas5.chr18 I 6 C 0 s calJac3.chr13 105199606 27 + 117903854 tgtgtgtata---tatgtgtgtatatatAT i calJac3.chr13 C 0 C 0 s aotNan1.NW_018502140v1 3536146 27 - 14941987 tgtgtataca---tatatatgtatatataA i aotNan1.NW_018502140v1 C 0 I 1 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e saiBol1.JH378121 19390187 105 - 31320352 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e manLeu1.NW_012106698v1 318226 67 - 1517660 I e chlSab2.chr18 59983817 110 - 72318688 I e cerAty1.NW_012001075v1 13154499 79 + 18905526 I e macNem1.NW_012016688v1 13537427 170 - 18804593 I e gorGor5.CYUI01014964v1 5301243 0 + 17472758 C a score=10474.000000 s hg38.chr18_GL383571v1_alt 7326 5 + 198278 atata s panTro5.chr18 64957996 5 + 78221452 ATATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080337 5 + 77229886 ATATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301243 1 + 17472758 ----A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337505 5 - 152096393 atata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293637 5 + 70235451 atata i rheMac8.chr18 C 0 I 42 s macFas5.chr18 62985004 5 - 75711847 atata i macFas5.chr18 C 0 I 23 s calJac3.chr13 105199633 5 + 117903854 ATATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390292 3 - 31320352 --ATA i saiBol1.JH378121 I 105 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e aotNan1.NW_018502140v1 3536173 1 - 14941987 I e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e manLeu1.NW_012106698v1 318226 67 - 1517660 I e chlSab2.chr18 59983817 110 - 72318688 I e cerAty1.NW_012001075v1 13154499 79 + 18905526 I e macNem1.NW_012016688v1 13537427 170 - 18804593 I a score=6136.000000 s hg38.chr18_GL383571v1_alt 7331 5 + 198278 AAATT s panTro5.chr18 64958001 5 + 78221452 TAATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080342 5 + 77229886 TAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301244 5 + 17472758 AAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337510 5 - 152096393 AAAtt i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 62985032 5 - 75711847 CACTA i macFas5.chr18 I 23 C 0 s calJac3.chr13 105199638 5 + 117903854 TAAtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390295 5 - 31320352 TAATT i saiBol1.JH378121 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e aotNan1.NW_018502140v1 3536173 1 - 14941987 I e cebCap1.NW_016107689v1 1579405 76 + 2203405 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e manLeu1.NW_012106698v1 318226 67 - 1517660 I e chlSab2.chr18 59983817 110 - 72318688 I e cerAty1.NW_012001075v1 13154499 79 + 18905526 I e macNem1.NW_012016688v1 13537427 170 - 18804593 I e rheMac8.chr18 57293642 42 + 70235451 I a score=20913.000000 s hg38.chr18_GL383571v1_alt 7336 9 + 198278 CTTTTC-ATA s panTro5.chr18 64958006 9 + 78221452 CTTTTC-GTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080347 9 + 77229886 CTTTTC-GTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301249 9 + 17472758 CTTTTC-GTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337515 9 - 152096393 cttttt-gta i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 62985037 9 - 75711847 tttttt-gta i macFas5.chr18 C 0 I 1 s calJac3.chr13 105199643 7 + 117903854 --tttt-ata i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390300 8 - 31320352 --TTTTAATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579481 9 + 2203405 Cttttt-ata i cebCap1.NW_016107689v1 I 76 C 0 s aotNan1.NW_018502140v1 3536174 8 - 14941987 -ttttt-ata i aotNan1.NW_018502140v1 I 1 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e manLeu1.NW_012106698v1 318226 67 - 1517660 I e chlSab2.chr18 59983817 110 - 72318688 I e cerAty1.NW_012001075v1 13154499 79 + 18905526 I e macNem1.NW_012016688v1 13537427 170 - 18804593 I e rheMac8.chr18 57293642 42 + 70235451 I a score=14196.000000 s hg38.chr18_GL383571v1_alt 7345 2 + 198278 tt s panTro5.chr18 64958015 2 + 78221452 tt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080356 2 + 77229886 tt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301258 2 + 17472758 tt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337524 2 - 152096393 tt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293684 2 + 70235451 tt i rheMac8.chr18 I 42 C 0 s macFas5.chr18 62985047 2 - 75711847 tt i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13537597 2 - 18804593 tt i macNem1.NW_012016688v1 I 170 C 0 s chlSab2.chr18 59983927 2 - 72318688 tt i chlSab2.chr18 I 110 C 0 s calJac3.chr13 105199650 2 + 117903854 tt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390308 2 - 31320352 TT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579490 2 + 2203405 tt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536182 2 - 14941987 tt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I e manLeu1.NW_012106698v1 318226 67 - 1517660 I e cerAty1.NW_012001075v1 13154499 79 + 18905526 I a score=1160987.000000 s hg38.chr18_GL383571v1_alt 7347 141 + 198278 ttttaaagatggagtctcactctgtcgcccaggctggagtgcagtggcaccatctcttggctcactgcaacctctgactcccaggttcaagcgattctcctgccccag-cttcggagtagctgggactataggcatgcacca s panTro5.chr18 64958017 141 + 78221452 ttttaaagatggagtctcactctgtcgcccaggctggagtgcagtggcaccatctcttggctcactgcaacctctgactcccaggttcaagctactctcctgccccag-cttcggagtagctgggactataggcatgcacca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080358 141 + 77229886 ttttaaagatggagtctcactctgtcgcccaggctggagtgcagtggcaccatctcttggctcactgcaacctctgactcccagattcaagctactctcctgccccag-ctttggagtagctgggactataggcatgcacca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301260 141 + 17472758 ttttaaagatggagtctcactctgtcgcccaggctggagtgcagtggcaccatctcttggctcactgcaacctctgactcccaggttcaagcgattctcctgccccag-cttcggagtagctgggactataggcatgcacca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337526 141 - 152096393 ttttaaagatggagtctcactctgtcgcccaggctggagtgcagtggcaccatctcttggctcaccgcaacctctgactcccaggttcaagcgattctcctgccccag-ctgcagagtagctgggactataggcatgcacca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293686 139 + 70235451 tttttaagatggagtctcactc--tcgcccaggctggagtgcagtggcaccacctctcgactcactgcaacctctgactcccaggttcaagcgattctcctgcctcag-ctttggagtagctgggactatagacatgcacca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985049 139 - 75711847 tttttaagatggagtctcactc--tcgcccaggctggagtgcagtggcaccacctctcgactcactgcaacctctgactcccaagttcaagcgattctcctgcctcag-ctttggagtagctgggactatagacatgcacca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537599 139 - 18804593 tttttaagatggagtctcactc--tcacccaggctggagtgcagtggcaccacctctcgactcactgcaacctctgactcccaggttcaagcgattctcctgcctcag-ctttggagtagctgggactatagacatgcacca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154578 139 + 18905526 tttttaagatggagtctcactc--tcgcccaggctggagtgcagtggcaccacctctcgactcactgcaacctctgactcccaggttcaagtgattctcctgcctcag-ctttggagtagctgggactatagacatgcacca i cerAty1.NW_012001075v1 I 79 C 0 s chlSab2.chr18 59983929 139 - 72318688 tttttaagatggagtctcactc--tcacccaggctggagtgcagtggcaccacctcttgactcactgcaacctctgactcccaggttcaagcgattctcctgcctcag-ctttggagtagctgggactatagacatgcacca i chlSab2.chr18 C 0 I 314 s manLeu1.NW_012106698v1 318293 139 - 1517660 tttttaggatggagtctcactc--tcgcccaggctggagtgcagtggcaccacctcttgactcactgcaacctctgactcccaggttcaagcgattctcctgcctcag-ctttggagtagctgggactatagacatgcacca i manLeu1.NW_012106698v1 I 67 C 0 s calJac3.chr13 105199652 142 + 117903854 tctttaagttggagtctcactttgttgcccaggctagagtgcagtggcaacaactctcagctcactgcaacctccaactcccgggttcaaacgattctgcggcctcagactcctgagtagcggggactatagacatgcacca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390310 142 - 31320352 TCAttaagatggagtcttactttgttgctcaggctggagtgcagtggcaacaactctcggctcactgcaacctctaactcctgggttcaaacgattctgcggtctcagcctcctgagtagctgggactacagagatgcacca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579492 142 + 2203405 tctttaagatggagtctcactttgttgcccaggctggagtgcagtggcaacaactctcggctcactgcaacctcagactcccgggttcaaacgattctgcggcctcagcctcctgagtagatgggactatagggatgcacca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536184 142 - 14941987 tccttaagatggagtctcactttgttgcccaggctggagtgcagtggcaacaactcttggctcactgcaacctccgactcccgggttcaaacgattctgcgccctcagcctcctgagtagctgcgactataggcatgcacca i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I a score=1212118.000000 s hg38.chr18_GL383571v1_alt 7488 143 + 198278 ccatgccaagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcctggtctcaagtgatccacccgcctcagtctcccaaagtattggga-ttacaggcatgtgccactgtgccc s panTro5.chr18 64958158 143 + 78221452 ccatgccaagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcctggtctcaagtgatccacccgcctcagtctcccgaagtattgaga-ttacaggcatgtgccactgtgccc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080499 143 + 77229886 ccatgccaagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctggtctcaagtgatccacccgcctcagtctcccaaagtattgaga-ttacaggcatgtgccactgtgccc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301401 143 + 17472758 ccatgccaagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcctggtctcaagtgatccacccgcctcagtctcccaaagtattggga-ttacaggcatgtgccactgtgcct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337667 143 - 152096393 ctatgccaagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcctggcctcaagtgatccacccgcctcagtctcccaaagtattggga-ttacaggcatgtgccactgtgccc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293825 143 + 70235451 ccatgcccagttaatttttatatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcccggcctcaagtgatccacccgccacagtctcccaaaatattggga-ttacagacgtgtgccaccgtgcct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985188 143 - 75711847 ccatgcccagttaatttttatatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcccggcctcaagtgatccacccgccacagtctcccaaaatactggga-ttacagacgtgtgccactgtgcct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537738 143 - 18804593 ccatgcccagttaatttttatatttttagtagagatggggtttcgccatgttggccagactggtctcaaactcccgacctcaagtgatccacccgccacagcctcccaaaatactggga-ttacagacgtgtgccactgtgcct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154717 143 + 18905526 ccatgcccagttaatttttatatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcccggcctcaagtgatccacccaccacagtctcccaaaacattggga-ttacagacgtgtgccactgtgcct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984382 143 - 72318688 ccatgcccagttaatttttatatttttaggagagatggggttttgccatgttggccaggctggtctcaaactcccggcctcaagtgatccacccgccacagtctcccaaaatattggga-ttacagacgtgtgccactgtgcct i chlSab2.chr18 I 314 C 0 s manLeu1.NW_012106698v1 318432 143 - 1517660 ccatgcccagttaatttttatatttttagtagagatggggtttcgccatgttggccaggctggtctcaaactcccggcctcaagtgatccacccgccacagtctcccaaaatattggga-ttacagacgtgtgccactgtgcct i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105199794 143 + 117903854 ccatgccctgctaatttttgtatttttagtagagactgggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtgatatgccctcctcagcctcccaaagtattgaga-ttacaggtgtgagccactgcacct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390452 141 - 31320352 ccacgtcctgctaatttttgtatttttagt--agacagggtttctccatgttggccagactagtctcaaactcctggcctcaagtgatctgcccacctcagcctcccaaagtgttggaa-ttacaggtgtgagccgctgcacct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579634 144 + 2203405 ccatgccctgctaatttttgtatttttagtagaaatggggtttctccatgttggccaggctggtctcaaactcctggcctcaggttatctgcctgcctcagcctcccaaagtgttgggatttataggcgtgagccactgcacct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536326 143 - 14941987 ccacgccctgctaatttttgtattttgagtagagacggggtttctccatattggccaggctggtctcaaactcctggcctcaagtgatctgcccgcctcagcctcccaaagtgttggga-ttacaggcgtgagccactgcacct i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I e colAng1.NW_012115433v1 3417967 359 + 6513552 I a score=58920.000000 s hg38.chr18_GL383571v1_alt 7631 5 + 198278 ggccA s panTro5.chr18 64958301 5 + 78221452 ggccA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080642 5 + 77229886 ggccA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301544 5 + 17472758 ggccA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337810 5 - 152096393 ggccA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293968 5 + 70235451 ggccA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985331 5 - 75711847 ggccA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537881 5 - 18804593 ggccA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154860 5 + 18905526 ggccA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984525 5 - 72318688 ggccA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318575 5 - 1517660 ggccA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418326 5 + 6513552 GGCCA i colAng1.NW_012115433v1 I 359 C 0 s calJac3.chr13 105199937 5 + 117903854 ggccA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390593 5 - 31320352 ggccA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579778 5 + 2203405 ggccA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536469 5 - 14941987 ggccA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e canFam3.chr1 112260893 421 - 122678785 I e otoGar3.GL873546 11195523 9 - 20685099 I a score=36211.000000 s hg38.chr18_GL383571v1_alt 7636 4 + 198278 GTAT s panTro5.chr18 64958306 4 + 78221452 GTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080647 4 + 77229886 GTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301549 4 + 17472758 GTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337815 4 - 152096393 ATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293973 4 + 70235451 ATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985336 4 - 75711847 ATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537886 4 - 18804593 ATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154865 4 + 18905526 ATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984530 4 - 72318688 ATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318580 4 - 1517660 ATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418331 4 + 6513552 GTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105199942 4 + 117903854 ATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390598 4 - 31320352 ATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579783 4 + 2203405 ATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536474 4 - 14941987 ATAT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112261314 4 - 122678785 GCAA i canFam3.chr1 I 421 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I e dasNov3.JH575754 423520 10 - 2150887 I e otoGar3.GL873546 11195523 9 - 20685099 I a score=579567.000000 s hg38.chr18_GL383571v1_alt 7640 51 + 198278 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA s panTro5.chr18 64958310 51 + 78221452 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080651 51 + 77229886 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301553 51 + 17472758 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337819 51 - 152096393 TCTGATATGTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57293977 51 + 70235451 TCTGCTATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985340 51 - 75711847 TCTGCTATTTAATAAGAGAGAAACCTGCTTTTCAAGAATCTCAATG-----CTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537890 51 - 18804593 TCTGCTATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154869 51 + 18905526 TCTGCTATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984534 51 - 72318688 TCTGCTATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318584 51 - 1517660 TCTGCTATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATA-----CTTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418335 51 + 6513552 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAAGAATCTCAATG-----CTTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105199946 51 + 117903854 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAATAATCTCACTG-----CTTCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390602 50 - 31320352 TCTGATATTTAATAAGA-AGACACCTGCTTTTCAATAATCTCACTG-----CTTCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579787 51 + 2203405 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAATAATCTCACTG-----CTTCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536478 51 - 14941987 TCTGATATTTAATAAGAGAGACACCTGCTTTTCAATAATCTCATTG-----CTTCC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195532 42 - 20685099 TTTAGTGTTTAGTAATAGAGCCACTTGCTTTC------TTTCATTA-----TT--- i otoGar3.GL873546 I 9 C 0 s canFam3.chr1 112261318 51 - 122678785 TTTAATATTTATTAAGAGAGCTGCCTGCCTGGAAAGAATCTGATTT-----CATTT i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 423530 55 - 2150887 TTTGGTAATTATTCGTAGAGCTGCTTGCTTTGCAAGAATCTCGGTGACTATCTCC- i dasNov3.JH575754 I 10 C 0 e proCoq1.NW_012148742v1 1203108 448 - 1406956 I a score=717489.000000 s hg38.chr18_GL383571v1_alt 7691 58 + 198278 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACCATTTTTTAATGAAGAAGA s panTro5.chr18 64958361 58 + 78221452 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACCATTTTTTAATGAAGAAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080702 57 + 77229886 CATGACAAGATGACTCCTAACTAATCTAGGCCATTAGACCA-TTTTTAATGAAGAAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301604 58 + 17472758 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACCATTTTTTAATGAAGAAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337870 57 - 152096393 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACCG-TTTTTTATGAAGAAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294028 58 + 70235451 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACTGTTTTTTAATGAAGAAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985391 58 - 75711847 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACTGTTTTTTAATGAAGAAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537941 58 - 18804593 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACTGTTTTTTAATGAAGAAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154920 58 + 18905526 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACTGTTTTTTAATGAAGAAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984585 58 - 72318688 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACTATTTTTTAATGAAGAAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318635 58 - 1517660 CATTACAAGATGACTCCTAACGAATCTAGGCCGTTAGACTGTTTTTTAATGAAGAAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418386 58 + 6513552 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACTGTTTTTTAATGAAGAAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105199997 58 + 117903854 CATTGCAAGATGACTCCGAACTAATCTAGGCCATTAGACCATTTTTTAATGAAGAAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390652 58 - 31320352 CATTACAAGATGACTCCTAACTAATCTAGGCCATTAGACCGTTTTTTAATGAAGAAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579838 58 + 2203405 CATTACAAGGTGACTTCTAACTAGTGTAGGCCATTAGAACGTTTTTTAATGAAGAAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536529 58 - 14941987 CCTTACAAGACGACTCCTAACTAATCTAGGCCATCAGACCATTTTTTAATGAAGAAGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1203556 58 - 1406956 CATTACAGGACTACTCCTAATTAATCCTGGCCATGAGACAATTTCTTTACAAAGGAGA i proCoq1.NW_012148742v1 I 448 C 0 s otoGar3.GL873546 11195574 49 - 20685099 --------GATGACTCCTAACTAATCTCCGCCATGAGA-AAGTCTTTTGCAAAGGAGA i otoGar3.GL873546 C 0 I 155 s canFam3.chr1 112261371 57 - 122678785 TGTTTTGAGACTAC-CCTACCAAACCTTAGCCTTTAGACGGTTCCTTTACAAAGGCAA i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 423585 58 - 2150887 CATTACCAGGCTACTCTTCCCTGGTCTTCACCATCAGACAGTGTCTTTACACAGGAGA i dasNov3.JH575754 C 0 C 0 a score=374928.000000 s hg38.chr18_GL383571v1_alt 7749 29 + 198278 CAAAAAGTAGTTTCACAACTGACAGTAGA s panTro5.chr18 64958419 29 + 78221452 CAAAAAGTAGTTTCACAACTGACAGTAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080759 29 + 77229886 CAAAAAGTAGTTTCACAACTGACAGTAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301662 29 + 17472758 CAAAAAGTAGTTTCACAACTGACAGTAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337927 29 - 152096393 CAAAAAGTAGTTTCACAACTGACAGTAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294086 29 + 70235451 CAAAAAGTAATTTCACAACTGACAGTAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985449 29 - 75711847 CAAAAAGTAATTTCACAACTGACAGTAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13537999 29 - 18804593 CAAAAAGTAATTTCACAACTGACAGTAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13154978 29 + 18905526 CAAAAAGTAATTTCACAACTGACAGTAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984643 29 - 72318688 CAAAAAGTAATTTCACAACTGACAGTAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318693 29 - 1517660 CAAAAAGTAATTTCACAACTGACAGTAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418444 28 + 6513552 CAAAAAGT-GTTTCACAACTGACAGTAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200055 29 + 117903854 CTAAAAGTAGCTTCACAACTGACAGTAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390710 29 - 31320352 CTAAAAGTAGTTTCACAACTGACAGTAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579896 29 + 2203405 CTAAACGTAGTTTCACAACTGACAGTAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536587 29 - 14941987 CTAAAAGTAGTTTCACAACTGACAGTAGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1203614 29 - 1406956 CAAAAAGCAGTTTCACAACTGATAGTAGA i proCoq1.NW_012148742v1 C 0 I 38 s canFam3.chr1 112261428 29 - 122678785 CAAAAAGCAGCTTCAAAATAAATAATAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 423643 29 - 2150887 CAGAAAGCAGTTTCAGCGATGATAACGGA i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11195623 155 - 20685099 I a score=80988.000000 s hg38.chr18_GL383571v1_alt 7778 6 + 198278 GGGGAT s panTro5.chr18 64958448 6 + 78221452 GGGGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080788 6 + 77229886 GGGGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301691 6 + 17472758 GGGGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337956 6 - 152096393 GGGGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294115 6 + 70235451 GGGGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985478 6 - 75711847 GGGGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538028 6 - 18804593 GGGGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155007 6 + 18905526 GGGGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984672 6 - 72318688 GGGGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318722 6 - 1517660 GGGGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418472 6 + 6513552 GGGGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200084 6 + 117903854 GGGGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390739 6 - 31320352 GGGGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579925 6 + 2203405 GGGGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536616 6 - 14941987 GGGGAT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112261457 4 - 122678785 --GGAT i canFam3.chr1 C 0 I 4049 s dasNov3.JH575754 423672 6 - 2150887 GGGTAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203643 38 - 1406956 I e otoGar3.GL873546 11195623 155 - 20685099 I a score=93724.000000 s hg38.chr18_GL383571v1_alt 7784 9 + 198278 AAAAATGAT s panTro5.chr18 64958454 9 + 78221452 AAAAATGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080794 9 + 77229886 AAAAATGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301697 9 + 17472758 AAAAATGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337962 9 - 152096393 AAAAATGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294121 9 + 70235451 AAAAATGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985484 9 - 75711847 AAAAATGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538034 9 - 18804593 AAAAATGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155013 9 + 18905526 AAAAATGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984678 9 - 72318688 AAAAATGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318728 9 - 1517660 AAAAATGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418478 9 + 6513552 AAAAATGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200090 9 + 117903854 AAAAATGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390745 9 - 31320352 AAAAATGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579931 9 + 2203405 AAAAATGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536622 9 - 14941987 AAAAATGAT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 423678 9 - 2150887 GAAGATGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203643 38 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I e otoGar3.GL873546 11195623 155 - 20685099 I a score=388639.000000 s hg38.chr18_GL383571v1_alt 7793 108 + 198278 TTgttgaggcaggagaatcgcttgaacccaggaggtggaggtttcagtgagccgagatcgcaccactgcactccagcc----tgggcatcacagcaagactctgtct-------c-aaaa s panTro5.chr18 64958463 108 + 78221452 TTgttgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtcagccgagatcgcaccactgcactccagcc----caggcatcacagcaagactctgtct-------c-aaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080803 108 + 77229886 TTgttgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcc----tgggcatcacagcaagactctgtct-------c-aaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301706 112 + 17472758 TTgttgaggcaggagaatcgcttgaacccaggaggtggaggtttcagtgagccgagatcgcaccactgcactccagcctgggtgggcatcacagcaagactctgtct-------c-aaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139337971 115 - 152096393 TTgttgaggcaggagaatcacttgaacccaggaggctgaggttgcagtgagccaagatcacaccactacactccagcc----tgggcatcacagcaagactctgtcctcccccgc-aaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294130 95 + 70235451 TTgttgaggcaggagaattgcttgaacccaggaggtggaggacacagtgagccaaaatcgcacc------------------tgggagtcagagcaagattctgcct-------taaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985493 94 - 75711847 TTgttgaggcaggagaattgcttgaacccaggaggtggaggacacagtgagccaaaatcgcacc------------------tgggagtcagagcaagattctgcct-------t-aaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538043 94 - 18804593 TTgttgaggcaggagaattgcttgaacccaggaggtggaggacacagtgagccaaaatcgcacc------------------tgggagtcagagcaagattctgcct-------t-aaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155022 90 + 18905526 TTgttgaggcaggagaatcgcttgaacccgggaggtggaggacacagtgagccaaaatcgcacc------------------tgggagtcagagcaagattctgcct-------t----- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984687 84 - 72318688 TTgttgaggcaggagaatcgcttgaacccgggaggtggaggacgcag----------ttgcacc------------------tgggtgtcagagcaagattctgcct-------a-aaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318737 90 - 1517660 TTgttgaggcaggagaatcgcttgaacccgggaggtggaggacacagtgagccaaaatcgcacc------------------tgggagtcagagcaagattctgcct------------t i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418487 92 + 6513552 TTgttgaggcaggagaatcacttgaacccgggaggtggaggacgcagtgagccaaaatcgcacc------------------tgggtgtcagagcaagattctgcct-------t---aa i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 423687 15 - 2150887 ------------------------------------------------------------CTCT------------------TCAGCATCAAG--------------------------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203643 38 - 1406956 I e calJac3.chr13 105200099 0 + 117903854 C e canFam3.chr1 112261461 4049 - 122678785 I e otoGar3.GL873546 11195623 155 - 20685099 I e aotNan1.NW_018502140v1 3536631 0 - 14941987 C e cebCap1.NW_016107689v1 1579940 0 + 2203405 C e saiBol1.JH378121 19390754 0 - 31320352 C a score=43001.000000 s hg38.chr18_GL383571v1_alt 7901 13 + 198278 aaaaaaaaaaaaa s panTro5.chr18 64958571 11 + 78221452 aaaaaaaaaaa-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080911 9 + 77229886 aaaaaaaaa---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301818 12 + 17472758 aaaaaaaaaaaa- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338086 8 - 152096393 aaaaaTAA----- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294225 12 + 70235451 aaaaaaaaaaaa- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985587 12 - 75711847 agaaaaaaaaaa- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538137 12 - 18804593 aaaaaaaaaaaa- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155112 12 + 18905526 aaaaaaaaaaaa- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984771 12 - 72318688 aaaaaaaaaaaa- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318827 12 - 1517660 aaaaaaaaaaaa- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418579 12 + 6513552 aaaaaaaaCACA- i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11195778 12 - 20685099 AAATAAAAATGA- i otoGar3.GL873546 I 155 I 1 e proCoq1.NW_012148742v1 1203643 38 - 1406956 I e calJac3.chr13 105200099 0 + 117903854 C e dasNov3.JH575754 423702 0 - 2150887 C e canFam3.chr1 112261461 4049 - 122678785 I e aotNan1.NW_018502140v1 3536631 0 - 14941987 C e cebCap1.NW_016107689v1 1579940 0 + 2203405 C e saiBol1.JH378121 19390754 0 - 31320352 C a score=128852.000000 s hg38.chr18_GL383571v1_alt 7914 19 + 198278 TTGTTTAGCAGTTCATACA s panTro5.chr18 64958582 19 + 78221452 TTGTTTAGCAGTTCATACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080920 19 + 77229886 TTGTTTAGCAGTTCATACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301830 19 + 17472758 TTGTTTAGCAGTTCATACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338094 19 - 152096393 TTGTTTAGCAGTTCATACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294237 19 + 70235451 aaGTTTAGAAGTGGATACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985599 19 - 75711847 aaGTTTAGAAGTGGATACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538149 19 - 18804593 aaGTTTAGAAGTGGATACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155124 19 + 18905526 aaGTTTAGAAGTGGATACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984783 19 - 72318688 aaGTTTAGAAGTGGATACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318839 19 - 1517660 aaGTTAAGAAGTGGATACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418591 19 + 6513552 GAGTTAAGAAGTGGATACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200099 19 + 117903854 TTGTTTTGCAGTGGATACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390754 19 - 31320352 TTGTTTAGCAGTGGATACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579940 19 + 2203405 TTGTTTAGTAGTGGATACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536631 19 - 14941987 TTGTTTAGCAGTGGATAGA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195791 19 - 20685099 TTTTTCAGCAGTGGAGGTT i otoGar3.GL873546 I 1 C 0 s dasNov3.JH575754 423702 4 - 2150887 -----------TGTA---- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203643 38 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I a score=1716046.000000 s hg38.chr18_GL383571v1_alt 7933 155 + 198278 GTGTTCCT-GGTGTCCTTGCGT-TTTGGAAATGCATAACTAGCCTATGCTCATTGTGAGGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTCATCACTTAAAACAGCCATATCT s panTro5.chr18 64958601 154 + 78221452 GTGTTCCT-GGTGTCCTTGAGT-TTTGGAAATGCTTA-TAAGCCTATGCTTATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTCATCATTTAAAACAGCCATATCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64080939 154 + 77229886 GTGTTCCT-GGTGTCCTTGTGT-TTTGGAAATGCTTA-TAAGCCTATGCTTATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTCATCACTTAAAACAGCCATATCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5301849 155 + 17472758 GTGTTCCT-GGTGTCCTTGCGT-TTTGGAAATGCATAACTAGCCTATGCCCATTGTGAGGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTCATCACTTAAAACAGCCATATCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338113 150 - 152096393 GTGTTCCT-GGTGTCCTTGCGT-TTCGGAAATGCATA-----ACTATGCCCACAGTGATGCGTTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCCATCAAGGATGAGGTCCTCCTCGTCACTTAAAACAGACATATCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294256 155 + 70235451 GTGTTCCT-GGTGTCCTTGCAT-TCTGGAAATGCATAACTAGCCTATGCCCATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATATCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTTATCACCTAAAATAGCCATATCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985618 155 - 75711847 GTGTTCCT-GGTGTCCTTGCAT-TCTGGAAATGCATAACTAGCCTATGCCCATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATATCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTTATCACCTAAAATAGCCATATCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538168 155 - 18804593 GTGTTCCT-GGTGTCCTTGCAT-TCTGGAAATGCATAACTAGCCTATGCCCATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATATCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTTATCACCTAAAATAGCCATATCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155143 155 + 18905526 GTGTTCCT-GGTGTCCTTGCAT-TCTGGAAATGCATAACTAGGCTATACCCATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATATCATCT-GTG--------GGATTCCATCAGGGATGAGCTCCTCCTTATCACTTAAAATAGCCATATCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984802 155 - 72318688 GTGTTCCT-GGTGTCCTTGCGT-TCTGGAAATGCATAACTAGCCTATGCCCATAGTGAAGCGCTTTTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTTATCACTTAAAATAGCCATATCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 318858 155 - 1517660 GTGTTCCT-GGTGTCCTTGCAT-TCTGGAAATGCATAACTAGGCTATGCCCATAGTGAAGCGCTTTTCTGTCACCAGCAATCTCAAAGTCCACAGATATCATCT-GTG--------GGATTCCATCAAGGATGAGCTCCTCCTTATCACTTAAAATAGCCATATCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418610 155 + 6513552 GTGTTCCT-GGTGTCCTTGCGT-TCTGGAAATGCATAACTAGCCTATGCCCATAGTGAAGCACTTCTCTGTCACCAGTAATCTCAAAGTCCACAGATGTCATCT-GTG--------GGATTCAATCAAGGATGAGCTCCTCCTTATCACTTAAAATAGCCATATCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200118 143 + 117903854 GTGTTCCT-GATGTCCTTGCTT-TTTGGAAATGCATAAC------------ATAGTGAAGCGGTTTTCCGTCACCAGTGGTCTTCAAGTCCACAGATGTCATCT-GTG--------GGATCCCATCAAGGATGAGCTCCTCATTATCACTTAAAATGGCCATATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390773 154 - 31320352 GTGTTCCT-GATGTCCTTGCAT-TTTGGAAATGCATAACTAGCCTATGCCTACAGTGAAGCAGTTTTCTGTCACCAGTGGTC-TCAAGTCCACGGATGTCATCT-GTG--------GGATCCCATCAAGGATGAGCTCCTCATTATCACTTAAAATAGCCATGTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1579959 155 + 2203405 GTGTTCCT-GATATCCTTGCAT-TCTGGAAATGCATAACTAGCCTATGCCTATAGTGAAGCAGTTTTCCATCACCAGTGGTCTTCAAGTCCACGGATGTCATTT-GTG--------GGATCCCATCGAGGATGAGCTCCTCATTATCACTTAAAATAGCCATATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536650 154 - 14941987 GTGTTCCT-GATGTCC-TGCAT-TTTGGAAATGCATAACTAGCCTATGCCTATAGTGAAGCAGTTTCCTGTCACCAGTGGTCTTAAAGCCCATGGATGTCATCT-GTG--------AGATCCCATCAAGGATGAGCTCCTCATTATCACTTAAAATAGCCATAGAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1203681 152 - 1406956 GTGTTCCTGGCTGTCCTTGCAT-TTCAGTAATGCATAACTAGCCTACACCCTTAGTGAAAGGTTTTTCTGTCACCAGTGATCTCAAAGTCCACAGAT----TAA-GTG--------GGATCCCATCCAGTATGAGATACTCTTCATCACTTAAAATAGCTATATCT i proCoq1.NW_012148742v1 I 38 I 105 s otoGar3.GL873546 11195810 127 - 20685099 GTGTTCCT-----------------------------ATTGTCCTAAGCCCTTAGAGACCAGTTCTTCCGTTACCAGTGGTTTCAAAGTCCA---------TGC-GTGCCATTTTTTGAATCCGCCAAGTGTGAGATATTCCTCATCATTTAAAACAGCCATCTCT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 423706 150 - 2150887 GTGTTCCC-ATTCTTCCTCAACACTTGGAAATGTATAATGAGCCTCTACCCTTAGCCAAGGGCTGTCCTGGCACCAGTGGTCTCCGATTACGCAGGTAACCTCCAGTG--------AGGTCCCATCCAATATGA------TCTTACCGCTTAAAA-AGTCACAGTT i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112261461 4049 - 122678785 I a score=965543.000000 s hg38.chr18_GL383571v1_alt 8088 100 + 198278 CTATGTCACTGCTACCATGCTACTCAACC-GATGTTTAGCACACAAAATACACCC-GTTACCATACAG-AAGCCTCTCTCTGAATT-AAAATTTCCCTTTG-CCC s panTro5.chr18 64958755 101 + 78221452 CTATGTCACTGCGACCATGCTACTCAACCTGATGCTTAGCACACAAAATACACCC-GTTACCATACAG-AAGCCTCTCTCTGAATT-AAAATTTCCCTTTG-CCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081093 101 + 77229886 CTATGTCACTGCTACCATGCTACTCAACCTGATGCTTAGCACACAAAATACACCC-GTTACCATACAG-AAGCCTCTCTCTGAATT-AAAATTTCCCTTTG-CCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302004 101 + 17472758 CTATGTCACTGCTACCATGCTACTCAACCGGATGCTTAGCACACAAAATACACCC-GTTACCATACAG-AAGCCTCTCTCTGAATT-AAAATTTCCCTTTG-CCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338263 101 - 152096393 CTATGTCACTGCTACCATGCTACTCAACCTGATGCTTAGCACACAAAATACACCC-GTTACCATACAG-AAGCCTCTCTCTGAATT-AAAATTTCCCTTTC-CCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294411 101 + 70235451 CTAGGTCACTGCTATCATACTACTCAACCTGATGCTTAGCACACAAAATACAGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-AACATTTTCCTTTG-CCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985773 101 - 75711847 CTAGGTCACTGCTATCATACTACTCAACCTGATGCTTAGCACACAAAATACAGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-AACATTTTCCTTTG-CCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538323 101 - 18804593 CTAGGTCACTGCTATCATACTACTCAACCTGATGCTTAGCACACAAAATACAGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-ACCATTTTCCTTTG-CCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155298 101 + 18905526 CTAGGTCACTTTTATCATACTACTCAACCTGATGCTTAGCACACAAAAAACAGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-AACATTTTCCTTTG-CCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59984957 101 - 72318688 CTAGGTCACTGCTATCATACTACCCAACCTGATGGTTAGCACACAAAATACAGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-AACATTTTCCTTTG-CCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319013 101 - 1517660 CTAGGTCACTGCTATCATACTACTCAACCTGATGCTTAGCACACAAAATACAGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-AACATTTTCCTTTG-CCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418765 101 + 6513552 CTATGTCACTGCTATCATGCTACTCAACCTGATGCTTAGCACACAAAATACGGCA-ATTACCATACAG-AAGCCTCTCTCTAAATT-AACATTTTCCTTTG-CCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200261 100 + 117903854 CTATGTCATTGCTACCGTACTACTCAACCTGATGTTAAGTAA---AAATACAGCA-GTTACCATAAGC-AAGCCTCTCTCTGAATTAAAAATTGCCCTTTGCCCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19390927 100 - 31320352 CTATGTCATTGATACCATGCTACTCAACCTGATGTTGAGTAC---AAATACAGCA-GTTACCATAAGCAAAGCCTCTCTCTGAATTAAAAATTGCCCTTTG-CCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580114 99 + 2203405 CTATGTCATTGCTACCATGCTATTCAACCTGATGTTGACTAC---AAATACAGCA-GTTACCATAAGC-AAGCCTCTCTCTGAATTAAAAATTGCCCTTTG-CCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536804 99 - 14941987 CTATGTCATTGCTACCGTGCTACTCAACCTGATGTTGAGTAC---AAATACAGCA-GTTACCATAAGC-AAGCCTCTCTCTAAATTAAAAATTGCCCTTTG-CCC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11195937 101 - 20685099 ATAAGCCACTGCGAGATTACTACTCTACCTGACACATAACACACAAACTATAGCA-ATCACCATTCAC-AGGCTGCTCATTAAATT-AGAAGTTTCCCTTT-CCT i otoGar3.GL873546 C 0 I 2 s dasNov3.JH575754 423856 100 - 2150887 ACGCACCACAGCTCTTCTGTGGATCAAGCTGGCACATTACATACAAA--ACAGCACATTTCCACACAC-AAGCTTCCCTTTGAATT-AAACTTTTCCCTTG-TCC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1203833 105 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I a score=1045395.000000 s hg38.chr18_GL383571v1_alt 8188 102 + 198278 -CTGATAATTTATTGACTGTCATGCACAGCTATGAGATGCTATTTCTCTAGAATAAGTGTTAGGGCATCGCT--ACATTGAA----------ACTCCCTTATA-TTTTTTGCACTG s panTro5.chr18 64958856 102 + 78221452 -CTGATAATTTATTGACTGTCATGCACAGCTATGAGATGCTATTTCTCTAGAATAAGTGTTAGGGCATTGCT--ACATTGAA----------ACTCCCTTATA-TTTTTTGCACTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081194 102 + 77229886 -CTGATAATTTATTGACTGTCATGCACAGCTATGAGATGCTATTTCTCTAGAATAAGTGTTAGGGCATTGCT--ACATTGAA----------ACTCCCTTATA-TTTTTTGCACTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302105 102 + 17472758 -CTGATAATTTATTGACTGTCATGCACAGCTATGAGATGCTATTTCTCTAGAATAAGTGTTAGGGCATTGCT--ACATTGAA----------ACTCCCTTATA-TTTTTTGCACTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338364 101 - 152096393 -CTGATAATTTATTGACTGTCATGCACAGCTATGAGATG-TATTTCTCTAGAATAAGTGTTTGGGCATCTCT--ACATTGAA----------ACTCCCTTATA-TTTTTTGCACTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294512 103 + 70235451 -CTGATAATTTATTGACTGTCATGCACAGCTTTGAGATGGTATTTCTCTAGAATAAGTGTTAGGGCGTCTGT--ACATTGAA----------ACTCCCTTATATTTTTTTGCACTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985874 103 - 75711847 -CTGATAATTTATTGACTGTCATGCACAGCTTTGAGATGGTATTTCTCTAGAATAAGTGTTAGGGCGTCTGT--ACATTGAA----------ACTCCCTTATATTTTTTTGCACTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538424 103 - 18804593 -CTGATAATTTATTGACTGTCATGCACAGCTTTGAGATGGTATTTCTCTAGAATAAGTGTTAGGGCGTCTGT--ACATTGAA----------ACTCCCTTATATTTTTTTGCACTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155399 103 + 18905526 -CTGATAATTTATTGACTGTCATGCACAGCTTTGAGATGGTATTTCTCTAGAATAAGTGTTAGGGCGTCTGT--ACATTGAA----------ACTCCCTTATATTTTTTTGCACTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59985058 97 - 72318688 -CTGATAATTTATTGACTGTCATGCACAGCTTT------GTATTTCTCTAGAATAAGTGTTAGGGCATCTGT--ACATTGAA----------ACTCCCTTATATTTTTTTGCACTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319114 103 - 1517660 -CTGATAATTTATTGACTGTCATGCACAGCTTTGAGATGGTATTTCTCTAGAATAAGTGTTACGGCGTCTGT--ACATTGAA----------ACTCCCTTATATTTTTTTGCACTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418866 103 + 6513552 -CTGATAATTTATTGACTGTCATGCACAGCTTTGAGATGGTATTTCTCTAGAATAAGTGTTAGGGCATCTGT--ACATTGAA----------ACTCCCTCATATTTTTTTGCACTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200361 101 + 117903854 -CTGAGAATTTACTGATTGTTATGCACAGCTATGCGATGGTACTTCTCTAGAATAAGCATTAGAGCATCTCT--ACATTGAA------------AGTCTTTTCTTTTTTTGCAGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19391027 112 - 31320352 -CTGAGAATTTATTGATTGTTCTGCACAGCTATGCAATGGTACATCTCTAGAATAAGCATTAGAGCATCTCT--ACTTTGAA-tttttttttttttttttttttttttttGCAGTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580213 106 + 2203405 -CTGAGAATTTACTGATTGCTCTGCACAGCTATGCGATGGTACTTCTCTAGAAGAAGCATTAGAGCATCTCT--ACATCAAA-------ACTCTTTTTTTTGTTGTTGTTGCAGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3536903 113 - 14941987 -CTGAGAATTTACTGATTGTTCTGCACAGCTATGCGAGGGTACTTCTCTAGAATAAGCATTAGAGAATCTCT--ACGTTGAAACTCttttttttttttttttttttttttGCAGTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1203938 104 - 1406956 -CTGAGAATTTATTGACTGTCATGCAGATCTATGAGTGAATATTTTTCTAGAATTGGTGTTAAGGCATCTCTCAACATTGAA----------ATTTCCTTATC-TCTTTTGCACTG i proCoq1.NW_012148742v1 I 105 I 2080 s otoGar3.GL873546 11196040 99 - 20685099 -GTGAGAACATACTCACCATCACCCCCATCTATGAGTGGATATTTTTCTAGAATCAGAGCTATGG---CTCTCCACATCGAA----------ACCCCCTTA---TCTTTTGCACTG i otoGar3.GL873546 I 2 C 0 s dasNov3.JH575754 423956 103 - 2150887 TAAGACAACATATTGACTGTCATGCACAGGTATGAAAAGGCAGTTCTCCAAAATTGGGGTTAGGGAATCTCA--ACATCGAA----------ATTCTCTTTTT-TCTCTTGCACTG i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112261461 4049 - 122678785 I a score=2106785.000000 s hg38.chr18_GL383571v1_alt 8290 227 + 198278 CAGCACTCAAGCATTGATTGATAACTAGATATGGA-ACAT-G--GTAGTTTGGCACAGAAGTATT-AAAAGCAGTATCAAGAGCTAAATACATTTGAGGTTAAGAATGAATACCATTTGAGGTGAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACCACATAACAATACC--AAAATAAGA-AAATTTAATCAAGAATTAAAAGAAGGGGAAAAGAAATATAAGAAAAGGGAAATA s panTro5.chr18 64958958 221 + 78221452 CAGCACTCAAGCATTGACTGATAACTAGATATGGA-ATGT-G--GTAGTTTGGCACAGAAGTATT-AAAAGCAGTATCAAGAGCTAAATACATTTGAGGTTAAGAATAAATACCATTTGAGATGAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACCACATAACAATACC--AAAATAAGA-AAATTTAATCAAGAATTAAAAGAAGGGGAAAAGAAATATAAGAAAAGG------ i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081296 221 + 77229886 CAGCACTCAAGCATTGACTGATAACTAGATATGGA-ATGT-G--GTAGTTTGGCACAGAAGTATT-AAAAGCAGTATCAAGAGCTAAATACATTTGAGGTTAAGAATAAATACCATTTGAGATGAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACCACATAACAATACC--AAAATAAGA-AAATTTAATCAAGAATTAAAAGAAGGGGAAAAGAAATATAAGAAAAGG------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302207 228 + 17472758 CAGCACTCAAGCATTGATTGATAACTAGATATGGA-ACGTAG--GTAGTTTGGCACAGAAGTATT-AAAAGCAGTATCAAGAGCTAAATACATTTGAGGTTAAGAATGAATACCATTTGAGGTGAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACCACATAACAATACC--AAAATAAGA-AAATTTAATCAAGAATTAAAAGAAGGGGAAAAGAAATATAAGAAAAGGGAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338465 222 - 152096393 CAGCACTCAAGCATTGATTGATAACTAGATATGGA-ACGT-G--GTAGTTTGGCACAGAAGTATT-AAAAGCAGTATCAAGAGCTAAATACATTTGAGGTTAAGAATAAATACCATTTGAGGTGAAGAATACAAGT-------TTTAGACACTCTTTT-ACTACCACATAACAATACC--AAAGTAAGA-AAATTTAATCAAGAATTAAAAGAAGGGGAAAAGAAATAAAAGAAAAAG------ i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294615 215 + 70235451 TAGCAATCAAGCATTGATTGATAACTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTATCAAGGGCTAAATACATTTGAGGTTAAG-ATAAATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAATAAGA-AAATTTAACCAAGAATTAAAAGAAGGGGAAAAGAAAT-----AAAAGG------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62985977 215 - 75711847 TAGCAATCAAGCATTGATTGATAAGTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTATCAAGGGCTAAATACATTTGAGGTTAAG-ATAAATACCATTTGAGGTTAAGAATA-AACT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAATAAGA-AAATTTAACCAAGAATTAAAAGAAGGGGAAAAGAAAT-----AAAAGG------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538527 215 - 18804593 TAGCAATCAAGCATTGATTGATAACTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTATCAAGGGCTAAATACATTTGAGGTTAAG-ATAAATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAATAAGA-AAATTTAACCAAGAATTAAAAGAAGGGGAAAAGAAAT-----AAAAGG------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155502 215 + 18905526 TAGCAATCAAGCATTGATTGATAACTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTATCAAGGGCTAAATACATTTGAGGTTAAG-ATAAATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAATAAGA-AAATTTAACCAAGAATTAAAAGAAGGGGAAAAGAAAT-----AAAAGG------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59985155 211 - 72318688 TAGCAATCAAGCATCGATTGATAACTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTGTCAAGGGCTAAATACATTTGAGGTTAAGAATAAACACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAATAAGA-AAATTTAACCAAGAATT-----AAGGGGAAAAGAAAT-----AAAAGG------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319217 215 - 1517660 TAGCAATCAAGCATTGATTGATAACTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTATCAAGGGCTAAATACATTTGAGGTTAAG-ATAAATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAATAAGA-AAATTTAACCAAGAATTAAAAGAAGGGGAAAAGAAAT-----AAAAGG------ i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3418969 221 + 6513552 CAGCAATCAAGCATTGATTGATAATTAGATAAGGA-ACGT-G--GTAGTTTGGCACAGAAGTACT-AAAAGCAGTATCAAGGGCTAAATACATTTGAGGTTAAGAATAAATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACTACTACATAACAATACC--AAAAGAAGA-AAATTTAACCAAGAATTAAAAGAAGTGGAAAAGAAATAAAAGAAAAGG------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200462 192 + 117903854 CAGCAATCAAGCATTGATTGATAACTAGGTATGGA-GCAT-G--ATAGTTTGGCACATAAATACT-AAAAGTAGTATCAAGGGCTAAAT--------------------ATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACGACTACATAACAATACC--AAAATAAGA-AAACTT----AAGAATTAAATGAAGGGGAAAGGAAAT-----AAAAGA------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19391139 196 - 31320352 CAGTAATCAAGCATTGATTAATAACTTGGTATGGA-GCAT-G--ATAGTCTGGCACAAAAATACT-GAAAGCAGTATCAAGGGCTAAAT--------------------ATACTATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACAACTACATAACAATACC--AAAATAAGA-AAACTTAATCAAGAATTAAATTAAAGGGAAAAGAAAT-----AAAAGA------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580319 196 + 2203405 CAGCAATCAAGCATTGATTGATAACTAGGTATGGA-GCAT-G--ATAGTTTTGCACAAAAATACT-AAAAGCAGTATCAAGGGCTAAAT--------------------ATATCACTTGAGGTTAAGAGTA-AAGT-------TTTAGACACTATTTT-ACAACTACATAACAATACC--aaaataaga-aaacttaatcaagaattaaatgaaggggaaaataaat-----aaaaga------ i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3537016 196 - 14941987 CAGCAATCAAGCATTGATTGATAACTAGGTATGGA-GCAT-G--ATAGTTTGGCACAAAAATACT-AAAAGCAGCATCAAGGGCTAAAT--------------------ATACCATTTGAGGTTAAGAATA-AAGT-------TTTAGACACTCTTTT-ACAACTGTATAATAATACC--AAAATAAGA-AAACTTCATCAAGAATTAAATGAAGGGGAAAACAAAT-----AAAAGA------ i aotNan1.NW_018502140v1 C 0 I 316 s otoGar3.GL873546 11196139 191 - 20685099 TAGTGATCAAACATTGATTGATAATTTGATAGGGGCGTGT-T--GTGGGTTTGCCCTAAAATACT-AAAAGCAGCTTCAATTGCAGAAT--------------------GTCCCATGGGGGGTTAAAAATA-AAAC-------TCTAGACAGTGTTGTAACTGCTAGATAACACCACC--aaaataagg-aaatttaaatagcaataaaattaaagtaaaaaaaaa------------------ i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 424059 195 - 2150887 CAGCAATGAAG-ATTGCTTAAGAACTGGATATGGA-AAAT-ACTGTGGTCCTTCACAAAAATATTAAAAAGCAGCATTGGGTGCTAAAT--------------------GCCCCATCTCAGGttaaaaata-aaatttaaaaattCAGACAAT-TTTT-ACTAATGTATGACAATACCAAAAAACAAGATAAATTTTATCAGAAATAAAAGAAAAAGGGAA----------------------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I a score=148805.000000 s hg38.chr18_GL383571v1_alt 8517 27 + 198278 TAAGAAAAGGAAAATATATGTTAATTT s panTro5.chr18 64959179 17 + 78221452 ----------AAAATATATGTTAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081517 17 + 77229886 ----------AAAATATATGTTAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302435 27 + 17472758 TAAGAAAAGGAAAATATATGTTAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338687 17 - 152096393 ----------AAAATATATGTTAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57294830 17 + 70235451 ----------AAAATATATGTTAATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62986192 17 - 75711847 ----------AAAATATATGTTAATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538742 17 - 18804593 ----------AAAATATATGTTAATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155717 17 + 18905526 ----------AAAATATATGTTAATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59985366 17 - 72318688 ----------AAAACATATGTTAATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319432 17 - 1517660 ----------AAAATATATGTTAATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3419190 17 + 6513552 ----------AAAATATATGTTAATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200654 17 + 117903854 ----------AAAACAAATGCTAATTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19391335 22 - 31320352 -----AAAGGAAAATAAATGCTAATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580515 22 + 2203405 -----aaaggaaaataaaTGTTAATTT i cebCap1.NW_016107689v1 C 0 C 0 s otoGar3.GL873546 11196330 22 - 20685099 -----aaagaaaaacaaaagttaaTTT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 424254 20 - 2150887 -------AGGGAAGTAAATGCCAATTC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I e aotNan1.NW_018502140v1 3537212 316 - 14941987 I a score=2985056.000000 s hg38.chr18_GL383571v1_alt 8544 280 + 198278 ATGAGATAAAAGTG-----TTTACACTCAACTTAGAACAAATCAC-AAAAAGTAATCGTCACTGGTG--------TCACT--------GCCTTGTCACCCATGTGCA-------------TAT--GTTTCCATGGCAATACCATCTATA-AAGTTAATCTATCAGCA-TTTTTCATGGCACTATCTTGTCCTGTGAGCCCTTAGAGAGATCAAGGTGGCACTAATATAATTAAATGTAAGAGCTATTTCACGGAGCATCTAGGGATACAGGTGTAGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA s panTro5.chr18 64959196 280 + 78221452 ATGAGATAAAAGTG-----TTTACACTCAACTTAGAACAAATCAC-AAAAAGTAATCGTCACTGGTG--------TCACT--------GCCTTGTCATCCATGTGCA-------------TAT--GTTTCCATGGCAATACCATTTATA-AAGTTAATCTATCAGCA-TTTTTCATGGCACTGTCTTGTCCTGTGAGCCCTTAGTGAGATCAAAGTGGCACTAATATAATTAAATGTAAGAGCTATTTCACGGAGCATCTAGGGATACAGGTGTAGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081534 280 + 77229886 ATGAGATAAAAGTG-----TTTACACTCAACTTAGAACAAATCAC-AAAAAGTAATCGTCACTGGTG--------TCACT--------GCCTTGTCATCCATGTGCA-------------TAT--GTTTCCATGGCAATACCATTTATA-AAGTTAATCTATCAGCA-TTTTTCATGGCACTGTCTTGTCCTGTGAGCCCTTAGTGAGATCAAAGTGGCACTAATATAATTAAATGTAAGAGCTATTTCACGGAGCATCTAGGGATACAGGTGTAGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302462 280 + 17472758 ATGAGATAAAAGTG-----TTTACACTCAACTTAGAACAAATCAC-AAAAAGTAATCATCACTGGTG--------TCACT--------GCCTTGTCACCCATGTGCA-------------TAT--GTTTCCATGGCAATACCATTTATA-AAGTTAATCTATCAGCA-TTTTTCATGGCATTATCTTGTCCTGTGAGCCCTTAGAGAGATCAAGGTGGCACTAATATAATTAAATGTAAGAGCTATTTCATGGAGCATCTAGGGCTACAGGTGTAGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139338704 277 - 152096393 ATGAGATAAAAGTG-----TTTACACTCAACTTAGAACAAATCAC-AAAAAGTAATCGTCACTGGTG--------TCACT--------GCCTTGTCACCCATGTGCA-------------TAT--GTTTCCATGATAATACCATTTATA-AAGTTAATCTATCAGCA-TTTTT-ATGGCACTATCTTGTCCTGTGAGCCCTTAGAGAGACCAAGGTGGCACTAATATAATTAAATGTAAGAGCTATTTCACAGAGCATCTAGGGATACAGGTGTAGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGA-- i nomLeu3.chr4 C 0 I 2707 s rheMac8.chr18 57294847 278 + 70235451 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGCAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGAGCCCTTAGAGAGATCAAGATGGCACTGACACAATTAACTGTAAGAGCTATTTCACAGAGCATCTAGGGATACAGGTGTCGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62986209 278 - 75711847 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGCAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGAGCCCTTAGAGAGATCAAGATGGCACTGACACAATTAACTGTAAGAGCTATTTCACAGAGCATCTAGGGATACAGGTGTCGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13538759 278 - 18804593 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGCAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGAGCCCTTAGAGAGATCAAGATGGCACTGACACAATTAACTGTAAGAGCTATTTCACAGAGCATCTAGGGATACAGGTGTTGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13155734 278 + 18905526 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGCAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGAGCCCTTAGAGAGATCAAGATGGCACTAACATAATTAACTGTAAGAGCTATTTCACAGAGCATCTAGGGATACAGGTGTCGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59985383 278 - 72318688 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGAAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGACCCCTTAGAGAGATCAAGGTGGCACTAACATAATTAACTGTAAGAGCTATTTCACAGAGCATCTAGGGATATAGGTGTCAGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319449 278 - 1517660 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGCAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGAGCCCTCAGAGAGATCAAGATGGCACTAACATAATTAACTGTAAGAGCTATTTCACAGAGCATCTAGGGATACAGGTGTCGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3419207 278 + 6513552 ATGAGATAAAAGTG-----TTTACAATCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GCCTTGTCACCCATGTGC---------------AT--GTTTCCATGGCAATGCCATTTATA-AAGTTAATCTATCAGCA-TTTTTCAAGGCACTATCTTGTTCTGTGAGCCCTTAGGGAGATCAAGGTGGCACTAATATAATTAACTGTAAGAACTATTTCACAGAGCATCTAGGGATACAGGTGTCGGTATCCTAGGTG-TGCCATTTATCCCTGAGTT---TATGAATAGAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200671 278 + 117903854 ATGAGATGAAAGTT-----TTTACATTCAACTTAGAACAAATCAC-AAAAAGTAATTGTCACTGGTA--------TCACT--------GTTCTGTTACCCATGTGC---------------AC--GTTTCCATGACAATAGCATTTATA-AAGTTAATCTATCAGCA-TTTTTCATGACACCATTTTGACCTGTGAGCCCTTAGAGAGATCAAGGTGGTACTAATATAATTAAATGTAAGAATTATTTCACAGAGCATCTAGGAATACAGGTGTAGGTATCCTAGATG-TGCCATTTATCCCTGAGTT---TATGAATAGAGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19391357 280 - 31320352 ATAAGAT-AAAATT-----TTTACATTCAACTTAGAACAAATCAC-AAAAAGTAATTGTCATTGGTA--------TCACT--------GTCGTGTCACCTGTGTGC---------------ACATGTTTCCATGGCAATAGCATTTATA-AAGTTAATCTATCAGCATTTTTTCATGACACCATTTTGACCTGTGAGCCCTTAGAGAGATCAAGGTGGTACTAATATAATTAAATGTAAGAATTATTTCACAGAGCATCTAGGAATACAGGTGTAGGTATCCTAGATG-TGCCATTTATCCCTGAGTT---TATGAATAGAGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580537 280 + 2203405 ATGAGATAAAAGTT-----TTTACATTCAACTTAGAACAAATCAC-AAAAAGTAATTGTCATTGGTA--------TCACT--------GTCGTGTCACCCGTGTGC---------------ACATGTTTCCATGGCAATAGCATTTATA-AAGTTAATCTATCAGCA-TTTTTCATGACACCATTTTGACCTGTGAGCCCTTAGAGAGATCAAGGTGGTACTAATATAATTAAATGTAAGAATTATTTCACAGAGCATCTAGGAATACAGGTGTAGGTATCCTAGATG-TGCCATTTATCCCTGAGTT---TATGAATAGCAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3537528 277 - 14941987 ATGAGATAAAAGTT-----TTTACATTTAACTTAGAACAAATCAC-AAAAAGTAACTGTCATTGGTA--------TCACT--------GTCGTGTCACCCGTGTGC---------------AC--GTTTCCATAGCAATAGCATTTATA-AAGTTAATCTATCAGCA-TTTTTCACGACA-CATTTTGACCTGTGAGCCCTTAGAGAGATCAAGGTGGTACTAATATAATTAAATGTAAGAATTATTTCACAGAGCATCTAGGAATACAGGTGTAGGTATCCTACATG-TGCCATTTATCCCTGAGTT---TATGAATAGAGC i aotNan1.NW_018502140v1 I 316 C 0 s otoGar3.GL873546 11196352 285 - 20685099 ATGAGACAGAAGTT-----TTTACACTGAGAATAAAATGAATCACAAAAAAGTAATTATGATTTGAATAATGTAGTCATT--------ACCTTGTCACCTATGTGCC-------------TAA--GTGTCCATGACATTAGCATCCAAA-AAGTTAATTTATCAGCA-TTTCTCATGCTACACTGCAATTCTGTGAGCCCTTAGAGAGATCAAAGTGACAGTAATATAATCAGATTTAGGAACTATCTCCCAGAGCATCTGAGGATACACATACATGTACTCGAGATG-TGCTGATTATCTCACGTTG---TATAGCAA---- i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 424274 292 - 2150887 ATGAGATCAGAATAAAAACTTTGCAGTCAATATAGTATAGATAAA-AAACGGTA--TATGACTTGTA--------TCATTTGCTCCTCGCCTTGTCACCTGTGTGTGCATGTGTGTGCCTTGT--GTTTTAATGGCATTAGCTTTCACATGAGTGAAAATATCAGCA--TTTTCAAGCCACCTTGTAG----------CCCTAGAGAGGTCAAGGTAGAATCCACGTCATTACGTTTTAGAGCTATCCCACAGTACGGCAGAAGATACAGAAATGTATCTCTTAAATATTGCAAATGCTCCGTGAGTTGCCTGTAGG------ i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I a score=820300.000000 s hg38.chr18_GL383571v1_alt 8824 123 + 198278 CGTTACCATCATGGAAG-AAAAA-Atgtgtctgtgttt------gtgtgtgtgtgtgtgtgtac------gtgtgtatgtAAGAACACACTGCGCACACACATGCACACATATGTTTGAGTGGGTATATTTTTCCTG-- s panTro5.chr18 64959476 123 + 78221452 CGTTACCATCATGGAAG-AAAAA-Atgtgtctgtgttt------gtgtgtgtgtgtgtgtgtgt------gtgtTTATGTAAGAACACACTGCACACACACATGCACATATATGTGTGAGTGGGTATATTTTTCCTG-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081814 123 + 77229886 CGTTACCATCATGGAAG-AAAAA-Atgtgtctgtgttt------gtgtgtgtgtgtgtgtgtgt------gtgtTTATGTAGGAACACACTGCACACACACATGCACATATATGTGTGAGTGGGTATATTTTTCCTG-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302742 129 + 17472758 CGTTACCATCATGGAAG-AAAAA-Atgtgtctgtgttt------gtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtATGTAAGAACACACTGCGCACACACATGCACATATATGTGTGAGTGGGTATATTTTTCCTG-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139341688 126 - 152096393 CGTTACCATCATGGAAGAAAAAA-Atgtgtctgtgttt------gtgtgtgtgtgtgtgtgtgt----gCATGTGTATGTAAGAACACCCTGCACACACACATGCACATATATGTGTGGGTGGGTATATTTTTCCTG-- i nomLeu3.chr4 I 2707 C 0 s rheMac8.chr18 57295125 108 + 70235451 CGTCACCATCGTGGAGGAAAAAA-Atgc----------------------gtgtgtgtgtgtgt------gtgtgtatgtAAGAACACATTGCACACACACATGCACATATATGTGTGGGCGGGTATATTTTTCCCA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62986487 112 - 75711847 CGTCACCATCGTGGAGGAAAAAC-Atgc------------------gtgtgtgtgtgtgtgtgt------gtgtgtatgtAAGAACACATTGCACACACACATGCACATATATGTATGGGCGGGTATATTTTTCCCA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13539037 102 - 18804593 CATCACCATCGTGGAGGAAAAAA-ATGC----------------------------GTGTGTGT------GTGTGTATGTAAGAACACATTGCACACACACATGCACATATATGTGTGGGCAGGTATATTTTTCCCA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13156012 104 + 18905526 CGTCACCATCGTGGAGGAAAAAA-Atgg--------------------------gtgtgtgtgt------gtgtgtatgtAAGAACACATTGCACACACACATGCACATATATGTGTGGGCGGGTATATTTTTCCCA-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59985661 100 - 72318688 CGTCACCATCGTGGAGGAAAAAA-A------------------------------TGCGTGTGT------GTGTGTATGTAAGAACACATTGCACACACACATGCACATATATGTGTGGGTGGGTATATTTTTCCCA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319727 104 - 1517660 CGTCACCATCGTGGAGGAAAAAA-Atgg--------------------------gtgtgtgtgt------gtgtgtatgtAAGAACACATTGCACACACACATGCACATATATGTGTGGGTGGGTATATTTTTCCCA-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3419485 106 + 6513552 CGTCACCAACGTGGAGGAAAAAA-ATGC------------------------GCGCGTGTGTGT------GTGTGTGTATAATAACACATTTAACAGACACACGCACATATATGTGTGGGTGGGTATATTTTTCCCA-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105200949 96 + 117903854 TGTTACTGCCATAGAAGAAAAAA-A--------------------------------TGTATGT------GTGTTTATGTAATAATACATTG--AACGCACATGCACATATATGTGTGGGTGGGTATATTTTTCCTG-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19391637 114 - 31320352 TGTTACCATCATAGAAGAAAAAA-AAgt--------gt------gtgtgtgtgtgtgtgtgtgt------gtgtgtatgtAATAATACATTG--CACACACATGCACATATATGTGTGGGTGGGTATATTTTTCCTG-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580817 98 + 2203405 TATTACCATCATAGAAGAAAAAA-A------------------------------TGTGTGTGT------GTGTATATGTAATGATACATTG--CACACACACACACATATATGTGCGGGTGGGTATATTTTTCCTG-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3537805 104 - 14941987 TGTAACCATCATAGAAGAAAAAA-A----------------------tgtgtgtgtgtgtgtgt------gtgtgtatgtAATAATACATTG----CACACATGCACATATATGTGTGGATGGGTATATTTTTCCTG-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11196637 64 - 20685099 TATTTTCATTATGGAGAAAAACA-C------------------------------TGTGTGTAT------ACAAGTATGT-----------------------GCACATATATAT-------------TTTCCCCTA-- i otoGar3.GL873546 C 0 I 3 s dasNov3.JH575754 424566 133 - 2150887 TATTACCAACAGGGAGGAAAAAACATGTGTATGTGTGTCAATGAGTGTAAATGTGTGTGAGTGA------ATTTCTCTCTAGATAGATATGTAGTAGCTATAGATATCTATACACATAGACATGTATATTTCACCCATC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I e canFam3.chr1 112261461 4049 - 122678785 I a score=3792498.000000 s hg38.chr18_GL383571v1_alt 8947 396 + 198278 AAACAATCTATGTA--TTGATCAAATTAAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCCTATTAA-----------------------------TTaaaaaacaaaacaaaacaaaaaacaaagaaGGAACTAGTGGCACCAACTACCCAGGTTTTT-ATTTTATACCCTTGATTCTAGATTCAGGTATTATACTTTAAGTATTTCATAAGATGCTAATAACATCTTTAGGACCAAGGC-TTGGAGGTTATTCAAAATGAA----AAATTAAA------AAAAAACCA------------AATACTTTAGTTAGTGCTCAAGGTCTTATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTCCTATTTTCAGAAGCACAGG s panTro5.chr18 64959599 389 + 78221452 AAACAATCTATGTA--TTGATCAAATTAAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCCTATTAA-----------------------------TTAAAAACCAAAACAAAA-----AACAAAGAAGAAACTAGTGGCACCAACTACCCAGGTTTTT-ATTTTATACCCTTGATTCTAGATTCAGGTGTTATACTTTAAGTATTTCATAAGATGCTGATAACATCTTTAGGACCAAGGC-TTGGAGGTTATTCAAAATGAA----AAAT--AA------AAAAAACCA------------AATACTTTAGTTAGTGCTCAGGGTCTTATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCTAGTCCTATTTTCAGAAGCACAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64081937 388 + 77229886 AAACAATCTATGTA--TTGATCAAATTAAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCCTATTAA-----------------------------TTAAAAACCAAAACAAAA-----AACAAAGAAGAAACTAGTGGCACCAACTACCCAGGTTTTT-ATTTTATACCCTTGATTCTAGATTCAGGTGTTATACTTTAAGTATTTCATAAGATGCTGATAACATCTTTAGGACCAAGGC-TTGGAGGTTATTCAAAATGAA----AAAT---A------AAAAAACCA------------AATACTTTAGTTAGTGCTCAAGGTCTTATACAAACAAGCAGAGTGTTCATGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTCCTATTTTCAGAAGCACAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5302871 394 + 17472758 AAACAATCTATGTA--TTGATCAAATTAAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCCTATTAA-----------------------------TTaaaaaacaaaacaaaaca---aaaaaacaaGGAACTAGTGGCACCAACTACCCAGGTTTTT-ATTTTATACCCTTGATTCTAGATTCAGGTGTTATACTTTAAGTTTTTCATAAGATGCTAATAACATCTTTAGGACCAAGGC-TTGGAGGTTATTCAAAATGAA----AAATTAAA------AAAAAACCA------------AATACTTTAGTTAGTGCTCAAGGTCTTATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCGCCCCCAGTCCTATTTTCAGAAGCACAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139341814 365 - 152096393 AAA----CTATGTA--TTGATC-AATTAAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCTTATTAA-----------------------------TTAAAA--------AAAA-----AAAAAACAAGAAACTAGTGGCACCAACTACCCAGATATTT-ATTTTACACCCTTGATTCTAGATTCAGGTGTTATACTTTAAGTATTTCATAAGATGCCAATAACATCTTTAGGACCAAGGC-TTGGTGGTTATTCAAAATGAG----AAAA---A------TAAAAA----------------------TAGTTAGTGCTCAAGGTCTCATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTCCTATTTTCAGAAGCACAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57295233 378 + 70235451 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTATGTAAACAATTTGCTGCTTATTAA---TTTT---------------------TTTA--------------------AAAAAGGAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGATAAGATGCTAATAACATCTTTAGGACCAAGGCTTTGGTGGTTATTCAAAATGAA----AAAA----------AAAAAA--A------------AATGCTTTAATTAGTGCTCACAGTCTCATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATTAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTGCTATTTTCAGAAGCACAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62986599 379 - 75711847 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTATGTAAACAATGTGCTGCTTATTAA---TTTT---------------------TTTA--------------------AAAAAGGAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGATAAGATGCTAATAACATCTTTAGGACCAAGGTTTTGGTGGTTATTCAAAATG-A----AAAA----------AAAAAACCA------------AATGCTTTAATTAGTGCTCACAGTCTCATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATTAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTGCTATTTTCAGAAGCACAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13539139 376 - 18804593 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTATGTAAACAATTTGCTGCTT----A---TTTT---------------------TTTA--------------------AAAAAGGAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGATAAGATGCTAATAACATCTTTAGGACCAAGGCTTTGGTGGTTATTCAAAATGAA----AAAA----------AAAAAAACA------------AATGCTTTAATTAGTGCTCACAGTCTCATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATTAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTGCTATTTTCAGAAGCACAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13156116 383 + 18905526 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTATGTAAGCAATTTGCTGCTTATTAA---TTTT---------------------TTTA--------------------AAAAAGGAAGGAACTAGTGGCACCAACTACCCAGATCTTTAATTTTACACTCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGGTAAGATGCTAATAACATCTTTAGGACCAAGGCTTTGGTGGTTATTCAAAATGAAAAACAAAA----------ACAAAAACA------------AATGCTTTAGTTAGTGCTCACAGTCTCATACAAACAAGCAGAGTGTTCACAGCAGCAAATGTCACTCTATGTCATTAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTGCTATTTTCAG-AGCACAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59985761 388 - 72318688 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTATGTAAAGAATTTGCTGCTTATTAAT--TTTT---------------------TTTC--------------------AAAAAGGAAGGAACTAGTGGCATCAACTACCCAGATTTTTAATTTTACACCCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGATAAGATGCTAATAACATCTTTAAGACCAAGGCTTTGGTGGTTATTCaaaatgaa----aaaa---aaaaaacaaaaaaaca------------aaTGCTTTAGTTAGTGCTCACAGTCTCATACAAACAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTGCTATTTTCAGAAGCACAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 319831 380 - 1517660 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTATGTAAACAATTTGCTGCTTATTAA---TTTT---------------------TTTA--------------------AAAAAGGAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGATAAGATGCTAATAACATCTTTAGGACCAAGGCTTTGGTGGTTATTCAAAATGAA----AAAC---A------ACAACAACA------------AATGCTTTAGTTAGTGCTCACAGTCTCATACAAACAAGCAGAGTGTTCATGGCAGCAAATGTCACTCTATGTCATTAGCATTCCATCCACATATGGGATCATCCCTCCAT-------CCCG-CCCCAGTGCTATTTTCAG-AGCACAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3419591 385 + 6513552 AAACAATCTATGTA--TTGATCACATTAAACATTTTTTATTTCCATGATTTACGTAAAGAATTTGCTGCTTATTAA---TTTT---------------------TTTA--------------------AAAAAGGAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCTTGATTCTAGTTTCAGGTGTTATATTTTAAGTATTTGATAAGATGCTAATAACATCTTTAGGACCAAGGCTTTGGTGGTTATTCAAAATGAA----AAAA----------AAAAAA--A------------AATGCTTTAGTTAGTGTTCACAGTCTCATACAAGCAAGCAGAGTGTTCACGGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACACATGGGATCATCCCTCCATCCCCCGCCCCC-CCCCAGTGCTACTTTCAGAAGCACAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105201045 392 + 117903854 AAACAATCTATATA--TTGATCAAATTGAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGTGTATTAA---ATT---------------------------AAAGAA-------------AACAAACAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCCTGGTTCTAGTTTCAGGTGTTATACTTTATGTATCTGATAAGATGCTAGTAACATCTTTAGGACCAAGTCTTTGGTGGTTATTCAAAATGAA----AAAA----------AAAAACAAAAAAACAAAAAACAACATTTTAGGTAGTGCTCACAGTCTCATAAAAACCAGCAGAGTGTTCACAGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACAGATGGTATCATCCCTCCAT-------CCTG-CCCCAATTCTATTTTCAGAAGCACAGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19391751 379 - 31320352 AAACAATCTATATA--TTGATCAAATTGAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCTTATTAA---ATT-----------------------TTAAAAAAAC-------------AACAAACAAGGAACTAGTGGCACCAACTACCCAGATTTTTATTTTTACACCCCTGATTCTAGTTTCAGGTGTTATACTTTATGTATTTGATAAGATGCTAGTAACACCTTTAGGACCAAGTCTTTGGTGGTTATTCAAAATGAA----AAAA----------AACA-----------------AACACCTTAGGTAGTGCTCACAGTCTCATAAAAACCAGCAGAGTGTTCACAGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACAGATGGTATCATCCCTCCAT-------CCTG-ACCCAATTCTGTTTTCAGAAGCACAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1580915 378 + 2203405 TAACAATCTATATA--TTGATCAAATTGAACA-TTTTTATTCCCATGATTTATGTAAAGAAATGGCTGCTTATTAA---ATT------------------------AAAAAAAAC-------------AACAAACAAGGAACTAGTGGCACCAACTACCCAGATTTTTAATTTTACACCCCTGATTCTAGTTTCAGGTGTTATACTTTATGTATTTGATAAGATGCTAGTAACATCTTTAGGACCAAGGCTTTGGTGGTTATTCGAAATGAA----AAAA----------ACCA-----------------AACACCTTAGATAGTGCTCAGAGTCTCATAAAAACCAGCCGAGTGTTCACAGCAGCAAATGTCACTCTATGTCATCAGCATTCCATCCACAGATGGTATCATCCCTCCAT-------CCTG-CCCCAATTCTATTTTCAGACACACAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3537909 379 - 14941987 AAACAATCTATATA--TTGATCAAACTGAACA-TTTTTATTCCCATGATTTAGGTAAAGAAATGACTACTTATTAA---ATT-----------------------TAAAAAAACA-------------AACAAATAAGGAACTAGTGGCACCAATTACCCAGATTTTTAATTTTACACCCCTGATTCTAGTTTCAGGTGTTATACTTTATGTATTTGATAAGATGCTAGTAATATCTTTAGTACCAAGGCTTTAGTGGTTATTCAAAATGAA----AAAA----------ATCA-----------------AGCACCTTAGGTAGTGCTCACAGTCTAATAAAAACCAGCAGAGTGTTCACAGCAGCAAATGTCACTCTATGTCATCAGCATTCCAACCACAGATGGTATCATCCCTCCAT-------CCTG-CCCCAATTCTATTTTCAGAAGCACAGG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11196704 355 - 20685099 AACCAATCTCTATG--TTAATCAAATTAGACA-TTTTTATTCCCATACTATTTATGAAGAAAACACTGCCTATTAG-----------------------------CTAACAAAAGA------------GCAAAAAAATGGACTAGTCGCATCAATTGCCCCAATTTTTTAT------------GTTCCTGTTTCAGGTTTTATATTTTAAGTTCTTGAAAAGATGCTAGGAACACCTCTGGGACCAAGACTTTGG-GGTCGTTCAAAATGAA----ACAA-------------------------------CATACTC--ATTAGTGCTCATATTTTCATATAGACAA----AGTGTTTCTGGTGGCAAATGCCACTTCGTATCACCAGAGTTCCCTTGCACTTTGGCATCATCCCCCCTC------ACCCC-TGCCAATGTCTTTCCCAGAAGCACGGG i otoGar3.GL873546 I 3 I 185 s canFam3.chr1 112265510 388 - 122678785 aagccacccaggca--tt--ccAAATTGAACA-TTTTTAATCCCAAGATTT-TATAAAGAAAAAGTGTCTTATtat---atatatatatatatatatatatatatatatatatatatataAAAG----AACAAAGAAGAAAACAGTGGTACCAAATGCCCAAAC-----ATTTTTTCCCCTCCATTCTAATTTTAGGTCTTATCCTTTAAGTACTTGATAAAATACTAGCAGCATCTTCAGGATCAAGGTTTTGGTGATTATTTAAAGTGGA----AAAG----------ATA------------------CATAATGTAGTTGGGTATCA--GTCTCATACAAACAAGCAGGGTGTT-ATAGCAGTAACTGTCACCTTA----------GTTCCGTTCACATGT--CATCATCCCCCCTC-------CTCGACTCCAGTTCTATTTTCTGAAGCACCTG i canFam3.chr1 I 4049 C 0 s dasNov3.JH575754 424699 360 - 2150887 TAGCTAGCTAGCTAGCTCAACTGAGTTGAACA-GTTTTAGTCCCAGGTTTTATAAAGGAAAATAG--GCCTATTAGGGAGTGT---------------------GGTG--------------------AACAATGAAAGAACCAGAGGTACTAACTGCCCAAACTTTAAATTTTCTACCCTTAGATCCAGCCTTGGGTTTTACACTTTGAATATGCAATAA-ATTTGAGTAACATCTCCAGGACCAAGACTCTGGTGCTTATTCAAAATGGA----AAAA----------TTA------------------AAGAGTTTAG-TGGTTTTCACAGCATCATGTCAGCACACAGAATGTTCCAG--AGCCAGTGTCCCTCTA--GCATGGGGGAT-CATCCACATCTG------TGCCTCCGC-------CCCA----CAAACCTATTTTCAGAAGCATAGA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I a score=4733676.000000 s hg38.chr18_GL383571v1_alt 9343 407 + 198278 CGAAACGTT--G----------------------------------------------------------------------------------TTGT--------CAAACAGTTTTACAACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCCAAAATTCCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTGTTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACTGGGTTGTAACTAT-----TTTCTATTATAATAACTAAAAC------TAAGGTTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATAAGATAATACAAACTGAACTTTAAGAAATTCTCAATGTATCATTTATTAATTTGGAATTAAAAACAATTTAAAGATAATGCAGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG s panTro5.chr18 64959988 407 + 78221452 CGAAACGTT--G----------------------------------------------------------------------------------TTGT--------CAAATAGTTTTACAACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCCAAAATTCCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAAAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACTGGGtaataactat-----tttctattataataactaaaac------taaGGTTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATAAGATAATACAAACTGAACTTTAAGAAATTCTCAATGTATCATTTATTAATTTGGAATTAAAAACAATTTAAAGATAATGCAGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64082325 407 + 77229886 CGAAACGTT--G----------------------------------------------------------------------------------TTGT--------CAAATAGTTTTACAACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCCAAAATTCCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAAAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACTGGGtaataactat-----tttctattataataactaaaac------taaGGTTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATAAGATAATACAAACTGAACTTTAAGAAATTCTCAATGTATCATTTATTAATTTGGAATTAAAAACAATTTAAAGATAATGCAGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5303265 406 + 17472758 TGAAACGTT--G----------------------------------------------------------------------------------TTGT--------CAAACAGTTTTACAACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCCAAAATTCCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAATTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACTGGGTTGTAACTAT-----TTTCTACTATAATAACTAAAAC------TAAGGTTCAGATTCTATTTTGTTCTCCTTCTTGTACTTATCAGAATAAGATAATACAAACTGAACTTTAAGAAATTCTCAACATATCATTTATTAATTTGGAATT-AAAACAATTTAAAGATAATGCAGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139342179 407 - 152096393 CAAAACGTT--G----------------------------------------------------------------------------------TTGT--------CGAATAGTTTTACAACAAGAACAGGATGTATCAGTTCGCATTGACTTATTTACTCCCAAAATTCCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACTGGGTTATAACTAT-----TTTCTATTATAATAACTAAAAC------TAAGGTTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATAAGATAATACAAACTGAACTTTAAGAAATTCTCAATGTATTATTTATTGATTTGTAATTAAAAACAATTTAAGGACAATGTAGTC-AAGTTAAAG-----AAAAAATAGTGGGAAGAAGTGGGTACCTGGTATTTTTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57295611 404 + 70235451 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTT---ACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACGGGGCTATAACTAT-----TTTCCATTATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATGAGACAATACAAACTGAACTTTAAGAAATTCTCAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62986978 404 - 75711847 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTT---ACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACGGGGCTATAACTAT-----TTTCCATTATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAGTGAGACAATACAAACTGAACTTTAAGAAATTCTCAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13539515 404 - 18804593 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTT---ACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACGGGGCTATAACTAT-----TTTCCATTATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATGAGACAATACAAACTGAACTTTAAGAAATTCTCAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13156499 404 + 18905526 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTT---ACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAACTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTCAATAATTTGTACGAGGCTATAACTAT-----TTTCCATTATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATGAGACAATACAAACTGAACTTTAAGAAATTCTCAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59986149 404 - 72318688 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTT---ACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTATGAGGCTATAACTAT-----TTTCCATTATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATGAGACAATACAAACTGAACTTTAAGAAATTCTCAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 320211 407 - 1517660 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTTACAACAAGAACAGGATGTATCAGTTCACATTGACTTATTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACGGGGCTATAACTAT-----TTTCCATTATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATGAGACAATACAAACTGAACTTTAAGAAATTCTCAATGTGTCATTTATTAATTGGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTACCTGGTATTTTTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3419976 406 + 6513552 CTAAACCTT--G----------------------------------------------------------------------------------TTGT--------CAAATATTTTTACAGCAAGAACAGGATGTATCAGTTCACATTGACTT-TTTACTCCTAAAATTTCCATTTTAGACACCAGACACAAATT-A-GCTCAACTGTATTTTCTACACTAGGAAGATAAAGTTTAATGACACTGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTATGGGGCTATAACTAT-----TTTCCATGATAATAACTAAAAC------TAACGCTCAGATTCTATTTTGTTCTCCTTTTTGTACTTATCAGAATGAGATAACACAAACTGAACTTTAAAAAATTCTCAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAAGACAATGTGGTC-AACTTAAAG-----AAAAAATAGCGGGAAGAGGTGGGTACCTGGTATTTTTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105201437 404 + 117903854 CTAAACGTT--G----------------------------------------------------------------------------------TTGT--------CAAATAGTTTA-CAACAGGAACAGGATGTATCCGTTCACATTGACTTATTTACTCCTAAAAATCTCATTTTAGACACCAGACTCAAATT-G-GTTCAACTGTATTTCCTACACCAAGAAGATAAAGTTCAATGACACTGAAAGCAAAACAAGTTGTGATTAGCTTCTGAATAATTTGGACTGGGCTAGAACAAC-----TTTCTATTATAATAATTAAAAC--------AAGTTTAGATTCTATTTTGTTTTCCTTTTTGTACTTATCAGAATAAGATAATGCAAACTAAACGTTAAGAAATTCTGAATGTGTCATTTATTAATTTGGAATTAAAAGCAATTTAAACACAATGTGGTC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTAGCTGGTATTTTTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19392130 393 - 31320352 CTAAATGTT--G----------------------------------------------------------------------------------TTGT--------CAAATAGTTTA-CAACAGGAATAGGAGGAATCAGTTCACATTGACTTATTTA-----------CTCATTTTAGAAACCAGACTCAAATT-A-GCTCAACTGTATTTCCTACACCAGGAAGATAAAGTTTAACGACACTGAAAGCAAAACAATTTGTGATTAGCTTCTGAATAGTTTGTACTGGGCTATAACAAC-----TTTCTATTATAATAAGTAAAAC--------AAGTTCAGATTCTAATTTGTTTTCCTTTTTGTACTTATCAGAATAAGTAAATGCAAACTAAACTTTAAGAAATTCTGAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAACACAATGTGGAG-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTAGCTGGTATTTTTAA i saiBol1.JH378121 C 0 I 627 s cebCap1.NW_016107689v1 1581293 386 + 2203405 CTAAAC-----G----------------------------------------------------------------------------------TTGT--------CAAATAGTTTA-CAACAGGAACAGGATGTAACAGTTCACATTGACTTAGTTACTCCTAAAAATCTCATTTTAGACACCAGACTCAAA-----------------TTCCTACACCAGGAAGATAAAGTTTAACGACACTGAAAGCAAAACAATTTGTGATTAGCTTCTGAATAGTTTGTACTGGGCTATAACAAC-----TTTCTATTATAATAATTAAAAC--------AAATTCAGATTCTATTTTGTTTTCCTTTTTGTACTTATCAGAATAAGATAATGCAAACTAAACTTTAAGAAATTCTGAATGTGTCATTTATTAATTTGGAATTAAAAACAATTTAAACACAATGTGGAC-AACTTAAAG-----AAAAAATAGTGGGAAGAGGTGGGTAGCCGGTATTTTTAA i cebCap1.NW_016107689v1 C 0 I 641 s aotNan1.NW_018502140v1 3538288 405 - 14941987 CTAAACGTT--G----------------------------------------------------------------------------------TTGT--------CAAATAGTTTA-CAACAGGAACAGGATGTATCAGTTCACATTGACTTACTTACTTCTAAAAATCTCATTTTAGACACCAGACTCAAATT-A-GCTCAACTGTATTTCCTACACCAGGAAGATAAAGCTTAATGACACTGAAGGCAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACTGGGCTACAACAAC-----TTTCTATTATAATAATTAAAAC--------AAGTTCAGATTCTATTTTGTTTTCCTTTTTGTACTTATCAGAATAAGATAATGCAAACTAAACTTTGAGAAATTCTGAATGTGTCATTTATTAATTTGGAAATAAAAACAATTTAAACACAATGTGGTCAAACTTAAAG-----AAAAAATAGTGGGAAGATGTGGGTAGCTTATATTTTTTA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11197244 482 - 20685099 CAAAACCTT--GACGTAAAATATGCAAAGGCAAATTACATAAATAAAACATCTGTACCCTCCATAGCATTTTGAAATTTAAAAAAAAATTCTCATTAT--------TAAATAGTTTT---ACATAAACAGAATGTATCAGTCCTCATTGATTTATTTATCCCTAAAATCCTCATGTTAGAAACCAGATATAAATT-A-GCTCAACAGTGTATCCTACAC-AGAGAGATAAAGTTTAATAACACGGAGAACAAAACAATTTGTGATTAGCTTCTGAATAATTTGTACCAATTTATA--TAT-----TATCTGTCAAAGTAATTAAAGC------TCAGATGTGGATTCCAATTGGTTCCCTATTTGGTATTTACCACGTTAAGACAGAACAAAGTGAACTCGAAGACCTTCCCAGTGAGTCATTTATGAAGTTTGGGTTAAAAGCAATTTTAAAATAATTAGGTC-AACTTAGAT------AAATGTAGTGGGGAAATATGAGGAAATAGTATTGACTG i otoGar3.GL873546 I 185 C 0 s canFam3.chr1 112265898 419 - 122678785 CTGAATCTT--G----------------------------------------------------------------------------------CTGTTACATCTCCAAGTAGTTTTACAATAGAAACAGG-TATGTGAGTTCTCATTGACTTATTTACTCCTAAATTCCTCATTTTAGAAACATGACACTAATTGG-GCTCAAAAGTGTTGTCTACCCTAGGGGGATGAAGTTTAAAAACACTGAGAGCAAAACAATTTGTTATTAGCTTCTAAATAATTAGTACTGGGCTTTAAGTAT----ATCTTTCCTATCATAATTGAAAT------TCATGTTCAGTTTCTAATTTATTCTGTTTATA--ATTTATCAGAGTGAGATAACACAAACAGAACTTTGAGAAATTCCCAATGTGTCACTTAAGAATCTTTGGTTAAAAACCATTTAAAATCAATGTGGTC-AACTTAAAAAAAAAAAAAAAAAGCAGGGGGAAGGGAACAGCTGGTATTTATTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 425059 413 - 2150887 CCAAACTCTTGG----------------------------------------------------------------------------------TTAC---ATCTCCAAATAGTTTTATAACAGAAACAGGGTGTAGATATTCTCACTGGCT---------CCTAGATCCTCATTTT---CACATAGCGCTAGTT-AGGTTCGACAATATTATCTGCCTGAGCAAGATGAAGTTTAATAACATCAGGAATCAAACAATTTGTGATTAGCCTCTGAATAATTTGTGCTGGGTTGTAACTATTTTTTTTTCTATCATAATAATTGGAATTCAGATTCAGATTCAGATTCTAATTTATTCTCCTTTTCTTATTTCCCAAAGGAAGATAACACAACCAGAAACTTAAGAAATTCCTAATGTGTTATTTATGAATTTTTTATTGACAGCAATAGAAACCCAACGTGGTC-AACTTAAAG--GACAAAAAATGATGGGA----GAGGTCACCTGGTATTTATTG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I a score=9305131.000000 s hg38.chr18_GL383571v1_alt 9750 889 + 198278 AAATAATGATAATATAGTTACATCACTAAAAAGAGAATGCTGACCAGGCAGGTAACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCGCCATCCGAAGAAATTGGCTGTATATTCCTCAATTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTGAAAAAG-AGT----CATGAA-GGAAAAGCAAGGTGT---TAAC-----------------------CACGACGAGAATAAAACA--TGAAGGAAAC-TGATGTCTAAC------CAATGCCTTAATTCCTTG--------------TTACATG-----------------------------TCATGAAA-C-TTTTAAAATAGGGGTATCCGAA----AGTTTAAGGGTTTAACT-TTAATG-TGAATCATATCCCTTTTGTATATTTTTT--AA-ATTAAGTTACAAATGTTCA-AGAGATTATGAAGTGAGAAAAAAAGAAAGCTATT--TATTCATACTCAGTTTATTT-TC-TTTAAAAAA--T-ATATAACAT-AA--TACGATAGTAGATGGGATTC----AA----------TAGCAGAT----------AGGATTCGGGACATCAAAATTCAAGAATTTATGTCCCATtat---caaaagctgtgaagggtttctgaagggtgtg-ggtgtttatctacttgcaagctaacaggtcagcctgctaaagtttcatggctgctgatcaaagacatgggaccaccaccgggtcagaggttaaggctagtttaata----cagcggaagtattaggcagaatatcagcatttgcactatttccctgaattca-gctctggcggagtaaagcaaataggttcacatgatatcctcaccacccagtgagttgtgtcacagcacaagaaccctgcatttagagaatccaaatct-t--ataatcagcaaaaagtatgt s panTro5.chr18 64960395 888 + 78221452 AAATAGTGATAATATAGTTACATCACTAAAAAGAGAATGCTGACCAGGCAGGTAACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCCGAAGAAATTGGCTGTATATTCCTCAATTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAGGCAATGTGAAAAAGGAGT----CATGAA-GGAAAAGCAAGGTGT---TAAC-----------------------CACGACGAGAATAAAGCA--TGAAGGAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACATG-----------------------------TCATGAAA-C-TTTTAAAATAGGGGTATCCGAA----AGTTTAAGGGTTTAACT-TTAATG-TGAATCATATCCCTTTTGTATATTTTTT--AA-ATTAAGTTACAAATGTTCA-AAAGATTATGAAGTGAGAAAAAAAGAAAGCTATT--TATTCATACTCAGTTTATTT-TC-TTTAAAAAA-AT-GTATAACAT-AA--TACGATAGTAGATGGGATTC----AA----------TAGCAGAT----------AGGATTCGGGACATCAAAATTCAAGAATTTATGTCCCATtat---caaaagctgtgaagggtttctgaagggtgtg-ggtgttaatctacttgcaagctaacaggtcagcctgctaaagtttcatggctgctgatcaaagacatgggaccacc---gggtcagaggtgaaggctagtttaata----cagcagaagcattaggcagaatatcagcatttgcactatttccctgaattca-gttctggcggagtaaagcaaataggttcacatgatatcctcaccacccagtgagttgtgtcacagcacaagaaccctgcatttagagaatccaaatct-t--ataatcagcaaaaagtatgt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64082732 888 + 77229886 AAATAGTGATAATATAGTTACATCACTAAAAAGAGAATGCTGACCAGGCAGGTAACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCTGAAGAAATTGGCTGTATATTCCTCAATTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTGAAAAAGGAGT----CATGAA-GGAAAAGCAAGGTGT---TAAC-----------------------CACGACGAGAATAAAGCA--TGAAGGAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------TCATGAAA-C-TTTTAAAATAAGGGTATCCGAA----AGTTTAAGGGTTTAACT-TTAATG-TGAATCATATCCCTTTTGTATATTTTTT--AA-ATTAAGTTACAAATGTTCA-AAAGATTATGAAGTGAGAAAAAAAGAAAGCTATT--TATTCATACTCAGTTTATTT-TC-TTTAAAAAA-AT-GTATAACAT-AA--TACGATAGTAGATGGGATTC----AA----------TAGCAGAT----------AGGATTCAGGACATCAAAATTCAAGAATTTATGTCCCATtat---caaaagctgtgaagggtttctgaagggtgtg-ggtgttaatctacttgcaagctaacaggtcagcctgctaaagtttcatggctgctgatcaaagacatgggaccacc---gggtcagaggtgaaggctagtttaata----cagcagaagcattaggcagaatatcagcatttgcactatttccctgaattca-gttctggcggagtaaagcaaataggttcacatgatatcctcaccacccagtgagttgtgtcacagcacaagaaccctgcatttagagaatccaaatct-t--ataatcagcaaaaagtatgt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5303671 885 + 17472758 AAATAATGATAATATAGTTACATCACT-AAAAGAGAATGCTGACCAGGCAGGTAACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCGCCATCCGAAGAAATTGGCTGTATATTCCTCAATTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTGAAAAAG-AGT----CATGAA-GGAAAAGCAAGGTGT---TAAC-----------------------CACGACGAGAATAAAACA--TGAAGGAAAC-TGATGTCTAAC------CAATGCCTTAATTCCTTG--------------TTACATG-----------------------------TCATAAAA-C-TTTTAAAATAGGGGTATCCTAA----AGTTTAAGGGTTTAACT-TTAATG-TGAATCATATCCCTTTTGTATATTTTTT--AA-ATTAAGTTACAAATGTTCA-AAAGATTATGAAGTGAGAAAAAAAGAAAGCTATT--TATTCATACTCAGTTTATTT-TC-TTTAAAAAA--T-ATATAACAT-AA--TACGATAGTAGATGGGATTC----AA----------TAGCAGAT----------AGGATTCGGGACATCAAAATTCAAGAATTTATGTCCCATtat---caaaagctgtgaagggtttctgaagggtgtg-ggtgttaatctacttgcaagctaacaggtcagcctgctaaagtttcatggctgctgatcaaagacatggcaccacc---gggtcagaggtaaaggctagtttaata----cagcagaagcattaggcagaatatcagcatttgcactatttccctgaattca-gttctggcggagtaaagcaaataggttcacatgatatcctcaccacccagtgagttgtgtcacagcacaagaaccctgcatttagagaatccaaatct-t--ataatcagcaaaaagtatgt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139342586 887 - 152096393 AAATAATGATAATATAGTTACATCACTAAAAAGAGAATGCTGACCAGGCAGGTAACATCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCGCCATCCAAAGAAATCAGCTGTATATTACTCAGTTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTGAAAAAGGAGT----CATGAA-GGAAAACCAAGGTGT---TAAC-----------------------CACGACGAGAATAAAAAA--TGAAAGAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACATG-----------------------------TCATGAAA-C-TTTTAATATAGGGGTATCTGAA----AGTTTAAGGGTTTAACT-TTAATG-TGAATCATATCCCTTTTGTATATTTTAA--AA-ATTAAGTTACAAATGGTGA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCATACTCAGTTTATTT-TC-TTTAAAAAA--T-ATATAACAT-AA--TACAATAGTAGATGGGATTC----AA----------TAGCAGAT----------AGGATTAGGGACATCAAAATTCAAGAATTTATGTCCCATtat---caaaacctgtgaagggtttctgaagggttcgtggtgttaatctacttgcaagctaacaggtcagcctgctaaagtttcacagttgctgatcaaagacatgggaccacc---gggtcagaggtaaaggctagtttaata----cagcagaagcagtaggcagaatatcagcatttgcactatttctctgaattca-gttctggcggagtaaagcaaataggttcacatgatatcctcaccacccagtgagttgtgtcacagcacaaaaaccctgcatttagagaatccaaatct-t--ataatcagcaaaaagtatgt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57296015 872 + 70235451 AAATAATGATGATATAGTTACATCACTAAAAGAAGAATGCTAACCAGGTAGGTAACAGCAAGGCCAGGAATGAAGAAATTAGTCT--AT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCCAAAGAA---AGCTGTATAGTCCTCAGTTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTCAAAAAGGAAT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAAAAAAAAAA---TGAAACAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------CCATGAAA-C-TTTTAAAACAGGGGTATCCGAA----AGTTTAAGGGTTTAAAT-TTAATG-TGAATCATGTCCCTTTTGTATATCTTTT--AA-ATTAAGTTACAAATTTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TG-TTTAAAAAA-AT-ATATAACAA-TACTCACAATAGTAGATGGGATCC----AA----------TAGCAGAT----------AAGATTATGGACATCAAAATTCAAGAATTTATGCCCTATtat---caaaagctgtgaagggtttgt-----------ggtgttaatctacttgcaagctaacaagtcaacctgctaaagtttcgtggctgctgatcaaagacatgggaccacc---gggtcggaggtaaagcctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttc-gacggagtaaagcaaataggttcacctgatatcctcgccacccagtaagttgtgtcacagcacaagaaccctacatttagagaatccaaatct-t--ataatcagcaaaaagcatgt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62987382 875 - 75711847 AAATAATGATGATATAGTTACATCACTAAAAGAAGAATGCTAACCAGGTAGGTAACAGCAAGGCCAGGAATGAAGAAATTAGTCT--AT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCCAAAGAA---AGCTGTATAGTCCTCAGTTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTCAAAAAGGAAT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAAAAAAAAAAAAATGAAACAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------CCATGAAA-C-TTTTAAAACAGGGGTATCCGAA----AGTTTAAGGGTTTAAAT-TTAATG-TGAATCATGTCCCTTTTGTATATCTTTT--AA-ATTAAGTTACAAATTTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TG-TTTAAAAAA-AT-ATATAACAA-TACTCACAATAGTAGATGGGATCC----AA----------TAGCAGAT----------AAGATTATGGACATCAAAATTCAAGAATTTATGCCCCATtat---caaaagctgtgaagggtttgt-----------ggtgttaatctacttgcaagctaacaagtcaacctgctaaagtttcctggctgctgatcaaagacatgggaccacc---gggtcggaggtaaagcctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttc-gacggagtaaagcaaataggttcacctgatatcctcgccacccagtaagttgtgtcacagcacaagaaccctacatttagagaatccaaatct-t--ataatcagcaaaaagcatgt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13539919 869 - 18804593 AAATAATGATGATATAGTTACATCACTAAAAGAAGAATGCTAACCAGGTAGGTAACAGCAAGGCCAGGAATGAAGAAATTAGTCT--AT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCCAAAGAA---AGCTGTATAGTCCTCAGTTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTCAAAAAGGAAT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAAAAACAAAAATG------AAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------CCATGAAA-C-TTTTAAAACAGGGGTATCCGAA----AGTTTAAGGGTTTAAAT-TTAATG-TGAATCATGTCCCTTTTGTATATCTTTT--AA-ATTAAGTTACAAATTTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TG-TTTAAAAAA-AT-ATATAACAA-TACTCACAATAGTAGATGGGATCC----AA----------TAGCAGAT----------AAGATTATGGACATCAAAATTCAAGAATTTATGCCCCATtat---caaaagctgtgaagggtttgt-----------ggtgttaatctacttgcaagctaacaagtcaacctgctaaagtttcgtggctgctgatcaaagacatgggaccacc---gggtcggaggtaaagcctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttc-gacggagtaaagcaaataggttcacctgatatcctcgccacccagtaagttgtgtcacagcacaagaaccctacatttagagaatccaaatct-t--ataatcagcaaaaagcatgt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13156903 872 + 18905526 AAATAATGATGATATAGTTACATCACTAAAAGAAGAATGCTAACCAGGTAGGTAACAGCAAGGCCAGGAATGAAAAAATTAGTCT--AT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCCAAAGAA---AGCTGTATAGTCCTCAGTTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTT---CCAAAAGTAAAAGCAATGTCAAAAAGGAAT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAAAAAAAAAAAA-TGAAACAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------CCATGAAA-C-TTTTAAAACAGGGGTATCCGAA----AGTTTAAGGGTTTAAAT-TTAATG-TGAATCGTGTCCCTTTTGTATATCTTTT--AA-ATTAAGTTACAAATTTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TG-TTTAAAAAATAT-ATATAACAA-TACTCACAATAGTAGATGGGATCC----AA----------TAGCAGAT----------AAGATTATGGACATCAAAATTCAAGAATTTATACCCCATtat---caaaagctgtgaagggtttgt-----------ggtgttaatctacttgcaagctaacaagtcaacctgctaaagtttcgtggctgctgatcaaagacatgggaccacc---aggtcggaggtaaagcctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttc-gacggagtaaagcaaataggttcacctgatatcctcgccacccagtgagttgtgtcacagcacaagaaccctacatttagagaatccaaatct-t--ataatcagcaaaaagcatgt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59986553 878 - 72318688 AAATAATGATGATATAGTTACATCACTAAAAGAAGAATGCTCACCAGGTAGGTAACAGCAAGGCCAGGAATAAAGAAATTAGTCT--AT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTAAGAATGCCACCATCCAAAGAAATCAGATGTATATTCCTCAATTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTTCTAACAAAAGTAAAAGCAATGTGAAAAAGGAAT----CATGAA-GAAAAATCAAGGTGT---TAAC-----------------------CACGGTGAAAATAAAAAA--TGAAACAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACATG-----------------------------CCATGAAA-C-TTTTAAAACAGGGGTATCCGAA----AGTTTAAGGGTTTAAAT-TTAATG-TGAATCATGTCCCTTTTGTATATCTCTT--AA-ATTAAGTTACAAATTTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TGTTTTAAAAAATAT-ATATAACAA-TACTCACAATAGTAGATGGGATCC----AA----------TAGCAGAT----------AAGATTATGGACATCAAAATTCAAGAATTTATGCCCCATtat---caaaagctgtgaagggtttgt-----------ggtggtaatctacttgcaagctaacaagtcagcctgctaaagtttcaaggctgctgatcaaagacatgggaccact---gggtcggaggtaaagcctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttc-gacggagtaaagcaaataggttcacatgatatcctcgccacccagtgagttgtgtcacagcacaagaaccctacatttagagaatccaaatct-t--ataatcagcaaaaagcatgt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 320618 874 - 1517660 AAATAATGATGATATAGTTACATCACTAAAAGAAGAATGCTAACCAGGTAGGTAACAGCAAGGCCAGGAATGAAAAAATTAGTCT--AT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCACCATCCAAAGAA---AGCTGTATAGTCCTCAGTTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTCAAAAAGGAAT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAAAAAAAAAAA--TGAAACAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------CCATGAAA-C-TTTTAAAACAGGGGTATCCGAA----AGTTTAAGGGTTTAAAT-TTAATG-TGAATCGTGTCCCTTTTGTATATCTTTT--AA-ATTAAGTTACAAATTTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TG-TTTAAAAAAAAT-ATATAACAA-TACTCACAATAGTAGATGGGATCC----AA----------TAACAGAT----------AAGATTATGGACATCAAAATTCAAGAATTTATGCCCCATtat---caaaagctgtgaagggtctgt-----------ggtgttaatctacttgcaagctaacaagtcaacctgctaaagtgtcgtggctgctgatcaaagacatgggaccacc---aggtcggaggtaaagcctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttc-gacggagtaaagcaaataggttcacctgatatcctcgccacccagtgagttgtgtcacagcacaagaaccctacatttagagaatcaaaatct-t--ataatcagcaaaaagcatgt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3420382 879 + 6513552 AAATAATGATGATATAGTTACATCACTGAAAGAAGAATGCTAACCACGTAGGTAACAGCAAGGCCAGGAATGAAGAAATTAGTCTAGAC----------------TT----------------------TCT---GAGCAATAAGGAATTAATTCCTTGAGAATGCCACCATCCAAAGGAATCAGCTGTATATTCCTCAATTACAAAGCTAATCATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAAAAGTAAAAGCAATGTGAAAAAGGAAT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAAACTAAAAAA--TGAAACAAAC-TGATGTTTAAC------CAATGCCTTAATTCCTTG--------------TTACGTG-----------------------------CCATGAAA-C-TTTTAAAATAGGGGTATCCGAA----AGTTTAAGGGTTTAACT-TTAATG-TGAATCATGTTCCTTTTGTATATCTTTT--AA-ATTAAGTTACAAATGTTCA-AAAGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TG-TTTAAAAAAAAT-ATATAACAA-TACTCACAATAGTAGATGGGATTC----AA----------TAGCAGAT----------AGGATTACGGACATCAAAATTCAAGAATTTATGCCCCATtat---caaaagctgtgaagggtttgt-----------ggtgttaatctacttgcaagctaacaagtcagcctgctaaagtttcatggctgctgatcaaagacttgggaccact---gggtcggaggtaaaggctagtttaata----tagcagaagcagtagccagaatatcagcatttgcactatttccctgaattca-gttt-gacggagtaaagccaataggttcacatgatatcctcgccacccagtgagttgtgtcacagcacaagaaccctgcatttagagaatccagatct-t--ataatcagcaaaaagcatgt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105201841 855 + 117903854 GAATAATGATAATATAGTTACATCACTAAAAAGAGAATGTTGACCAGGCAGGTCACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------AT----------------------TCT---GAAAAATAAGGAATTAATTTCTTGAGAATGCCACCATCCAAAGAAATCAGCAGTTTATTCCTCAGTTACAAAGCTGATAATACAATTTC---AGAGACAATCTGATTTACATTTCTACCAAAAGGAAAAGCAATATAAAAAATAAGT----CATGAA-GAAAAACC-----------------------------------------------------------AAGGAAAC-TGATGCTTAAC------CAATGGCTTCATTCCTTG--------------TTACATG-----------------------------CCATGAAA-C-TTTTTAAATAGGGGTATCTAAA----ACTTAAAGGGTTTAAGC-TTGATG-TTAATCATGTCCCTTTTGTATATCTTTC--AA-ATTAAGTTACAAATGTTCA-A-AGATTATGAAGTGAGAAAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TC-TTTAAAAAATACAATAACACAA-TACTCACAATAGTAGATGGGATTC----AA----------TAATAGAT----------AGGATTATGGGTATCAAAATTCAAGAATTC-TGCCTCATTAT---CAAAAGCTGTGAAGGGTTtgtgaaggatttgtgatgttaccctatttgcaagctaacaagttagtctgctaaactttcatggctgccgatcaaagacatgagaccaca---gggtcagatagaaaggctaatttaata-----agcagaagcagtaggcagaatatca-catttacactatctccctgagttca-gttctggcagagtaaagcaaataggttcgcatgatatcctcaccacccagtgagttgtatcacagcacaagagctctgaatttagagaacctagatct-t--ataatcagcagaaagcatgt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19393150 888 - 31320352 aaaTAATGATAATATAGTTACATCATTAAAAAGAGAATGCTGATCGGGCAGGTCACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGCCAACATCCAAGGAAATCAGCAGTTTATTCCTCAGTTACAAAGCTGATAATACAAATTTCAAAAAGACAACATGATTAACATTTCTACCAAAAGTAAAAGCAATGTAAAAAAGGAGT----CATGAA-GAAAAACCAAGTTGT---TAAC-----------------------CACGGTGAGAATAAAAAA--TGAAGGAAAT-TGATGCTTAAC------CAATGCCTTCATTCCTTG--------------TTACATG-----------------------------CCATGAAA-C-TTTTTAAATAGGGGTATCTAAA----ACTTAAAGGGTTTAAGC-TTAATG-TTAATCATGCCCCTTTTGTATATCTTTC--AA-ATTAAGTTACAAATGTTCA-A-AGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATTCACACCCAGTTTATTT-TC-TTTAAAAAATAC-ATAACACAA-TACTCACAATAGTAGATGGGATTC----AA----------TAATAGAT----------ACGATTATGGGTATCTAAATTCAAGAATGC-TGCCTCATTAT---CAAAAGCTGTGAAGGGTTtgtgaaggatttgtgatgttaccctacttgcaagctaacaagttggcctggtaaagtttcagagctactgatcaaagacatgagaccaca---gggtcagatataaagactaatttaata-----agtagaagcagtagccagaatatcagcatttacactctttccccgagtcca-gttctggcagagtaaagcaaataggttcacatgatatcctcaccagccagtgagttgtatcacagcacaaagaccctgaatttagagaacctaaatct-t--agaatcagcagaaagcatgt i saiBol1.JH378121 I 627 C 0 s cebCap1.NW_016107689v1 1582320 882 + 2203405 aaaTAATGATAATATAGTTACATAACTAAAAAGAGAATGCTGACCAGGCAGGTCACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---TAACCATAAGGAATTAATTCCTTGAGAATGCCACCGTCCAAAGAAATCGGCAGTTTATTCCTCAGTTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTACCAATAGTAAAAGCAATGTAAAAAATAAGT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAGAATAAAAAA--TGAAGCAAAC-TGATGCTTAAC------CAATGCCTTCATTCCTCG--------------TTACATG-----------------------------CCTTGAAC-C-TTTTTAAATAGGGGTATCTAAA----ACTT-AAGCGTTTAAGC-TTAATG-TTAATCACGTCTCTTTTGTATATCTTTC--AA-ATTAAGTTACAAATGTTCA-A-AGATTATGAAGTGAG-AAAAAAGAAAGCGATTTATATTCACACCCAGTTTATTT-TC-TTTAAAAAACAC--------AA-TACTCACAATAGTAGATGGGATTC----AA----------TAATAGAT----------ACGATTATGGGTATCAATATTCAAGAATGC-TGCCTGATTAT---CAAAAGCTGTGAAGGGTTtgtgaaggatgtgtgatgttaccctacttgcaagctaacaagttggcctgctgaagtatcatggctactgatcaaagacatgagaccaca---gagtcagatataaaggctaatttaata-----agcagaagcagtaggcagaatatcagcatttacactatttccctgagttca-attctcgcagagtaaagcaaataggttcacatgatatcctcaccacccagtgagttgtatcacagcacaagaaccctgaatttagagaacctaaatct-t--ataatcagcagaaagcatgt i cebCap1.NW_016107689v1 I 641 C 0 s aotNan1.NW_018502140v1 3538693 885 - 14941987 AAATAATGATAATATAGTTACATCACTAAAAAGAGAATGCTGACCAGGCAGGTCACAGCAAGGCCAGGAATGAAGAAATTATTCTAGAT----------------TT----------------------TCT---GAACAATAAGGAATTAATTCCTTGAGAATGACACCATCCAAAGAAATCAGCAGTTTATTCCTCAGTTACAAAGCTGATAATACAAATTTCAGAAAGACAATCTGATTAACATTTCTGCCAAAAGTAAAAGCAATGTAAAAAAGAAGT----CATGAA-GAAAAACCAAGGTGT---TAAC-----------------------CACGGTGAGAATAAAAAA--TGAAGGAAAC-TGATGCTTAAC------CAATGTCTTCATTCCTTG--------------TTACATG-----------------------------CCATGAAA-C-TTTTTAAATAGGGGTATCTAAA----ACTTAAATGGTTTAAGC-TTAATG-TTAATCATGTCCCTTTTGTATGTCTTTC--AA-ATTAAGTTACAAATGTTCA-A-AGATTATGAAGTGAG-AAAAAAGAAAGCTATT--TATCCACACC--GTTTATTT-TC-TTTAAAAAATAC-ATAACACAA-TACTCACAATAGTAGATGGGATTC----AA----------TAATAGAT----------ACAATTATGGGTATCAAAATTCAAGAATTC-TGCCTCATTAT---CAAAAGCTGTGAAGGGTTtgtgaaggatgtgtgatgttaccctacttgcaagctaacaagttggcctgctaaagtttcatgtctactgatcaaagacatgagaccaca---gggtcagatataaaggctaatttaata-----aacagaagcagtagccagaacatcagtatttacactattt-cctgagttcc-gttctggcagagtaaagcaaataggttcacatgatatcctcaccacccagtaagttgtataacagcacaagaatcctgaatttagagaacctaaatct-t--ataatcagcagaaagcatgt i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11197726 894 - 20685099 GAATTATGGTGAAAGCCATGCAGTGCTGAGAAGACCATGCTGACCAGGCAGGGCAGAGGGAGGCCAGGGATGAA------ATTCTAGAT----------------TT----------------------ACA---GAATAATAGGTAATTAATTCCTTGAGAAGGCCACCACCCAAAGAAATCAGTGCTGT-TTCTTGAATCAAAGAACTGATAGTATAAATTTCAGACAGACAATCTGATTAGCTTTTTTACCAAAAGTAAAAGCAATGTGAAAAGGAAGT----CATGAACTAAAAACCAAGGTGTTGATAAA-----------------------CCGAGTGAGAATGAAAAA--TTAAAGAAACACGGTGCCTAACCAAAGTCAATGCTGTGACTTTGTG--------------CTGCGTGAATGCCAA-------------------ATTAGTAAAATC-CTTTCAAATAGCTGTATCCTGA----ACCTGAAGGGTTTCACC-TGTATATTTAACTGTGTCTCTTTTGTAAATCTTTT--CATTTTAAGTTATAAATTTTAA-AAAGATTATAAGGTAGG-AATAAAGAAAGCTATT--TCTTCATAAATATTT--TTC-TT-TTTAAAAGA--T-ATCTAACA------CCTCATATTAGATGAAATTCCTCAGA----------CATCATTC----------AAATTCACAAATACCAGAATTCAAGGATCTATGCCCCACTGTAAAcaaaagctgtgagggttttga-----------ggggttgccctacttggaaggtaacagagaagcctgccacagttccagggatgttggcaggagacatgagcaggca---ggatcatggacagaggcttgtttgacactcacaataatggcagtcactaggatatcagcgtttgtactgtttccctgagtctaggttctgacagtgtgaaaccaataaattcacatggtgcctgcacca--cagtgagttgtgt-----cctaagaactctgactttggagagccctgccttac--atactcctcagacaacttgc i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112266317 881 - 122678785 ---GAATAATAATAGATTTACTTTACTGAAAAGAGAAAGCTGACCAGGCAAGTAACAGAAAGCCCAGGAATTAAGAAATTATTCTATATTTGGCATAAGAAACAATT----------------------TCTAAGGAACAATAGGTAATTAATT-CTTCAGGATGGCAATATGCAAATGAATTAGCT-TAGGGTCTTGAATAATTATGCTGATGCTATAAATTCCAGAAAGATAGTCTGATTAATATTTCTACCAAAATTAAAAGCAATGTGAAAAAAGTAT----TTTGAA-GAAAAACTCAGGTAT---TAGC-----------------------CAAAATGAGAATGAAATA--TCAATGTAAC-TGTCTGCTGCC-ATTTTCAATGCCTTAACATTTTA--------------TTACATGCATCCTAATTTGATTTTTAAAAAATGCTTTAAAAAAG-A-TTTTAAACTAGTTGTGTTTTCAACACAAATTAAGGATTAAAAC-TCAATGTTTAACCATACTCCCTTTGTAAATGTTTT--AA-GCTGAATTTC--------------------AGGTGAC-AAAAAAGAAAGAAATT--TGTGCATACTCAATTTATTTCTA-TTTCAAAAGTGT-ATAATACAA-ATTTAATAACAGCAGATGGGATTC----AG----------CAGCCATTATTGACTTCCAGATTCAAGAACAGCAGAATTTAAGGATCTATGCTCTGTtgt---caaaagctgtgaagggtcagata---------tgtgttgccgtacttgcaggataacatgttagtctgcctgaggtccctggatactggcagaagacatgagatccca---------gagatgaaagacaatatgata------------gccacagccat----------------------------------tttctaataaaatgaaacaagtaggcctggaagacacctgca-tatacagtgagctgggttacaggacaagatccctgagtttagagaacccaaatct-tacatactcagtagtaagcatgc i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 425472 917 - 2150887 ---AAATAATAATGGAGCTAACTAACTGA-------------ATCAGGCAGGCCACAGAAAGGTCAAGAATGGAGCATTT-TTCTAGAT----------------TTACATTTGCTATAAGGAAAAATACCC---AAGGAACAATAGATCAATTCCTTCAG-ATGCCACCATCCAGATAAATCATCTTTTGACTCTTGCATCTTTATGCTAATTCTTTAAGTTTCAGAAGGACAGTCTGATTAACATCTTTACCA--AGTTGAAAAAATGGAAAAATAAAGTATCCCAGAAT-TAAAAAACAAGGTGT---TAACAGTAAGAGAAATGTATACTGAGGTGTGCTGAGAATGAAAAA--TTGAGT-AAC-TGTCACTTAGCAAGACTCATTGTCTTAACTCTGTGATTGGCTCATGTATTCCAGTG-----------------------------CAATACAA-CATTTTAAAATTGCTGCTTCTGAA----ACCCTAAGCATTCATATAAAAATGTTTAATCATTTCCCCTTTTGaaatttttttaaa-tttaaattttaaatCTTCAGAAAAATTATGAGGCAGT--------GTTGCTGTT--TATTCACACTTGAGTTATTT-CT-TGCAAAAAATTT-AAAATACAAGTAAGTATAATAGTAGATGGGATTC----AGCAGGCATTATTAGCATCC----------AAATTCAAGAAAATCAGGATTCAAATATCTATGCTGCATtgt---caaaaactgt----------------------gatttcaacctacttgcaaactaat--gttagcctgccagagtttcatggattctgtcagaagataagagattcct---gggccagagataaaggacagtttaataatcagagcaataactatggccagaataatagcatttgcactagtttcct-------------tacagggtgaaatgatggggatcagaagatgtctgca-cacacagtgagttttgttacaggacatgaaccttgagcttagagaacccaaatct-tttatgagctgcaataaattga- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1204042 2080 - 1406956 I a score=2744685.000000 s hg38.chr18_GL383571v1_alt 10639 241 + 198278 ctgacctttgttctggaggaaaacattatctttattaca-ctggacagcaaacaagcctgtcctttactctggagggaaacactatctctatcttccaaggctgtttgctatacaaagatgat-t-aaaaggtaatccagaacaaaagcagtcagtacttctttttgcaagac-tacagttaattgagacacccatggagaat----ggtctcccaacaTTCATTTCCTAAAACTTCTTCAGTCTTGAA s panTro5.chr18 64961283 241 + 78221452 ctgacctttgttctggaggaaaacattatctttattaca-ctggacagcaaacaagcctgtcctttactctggagggaaacactatctctatcttccaaggctgtttgctatacaaagatgat-t-aaaaggtaatccagaacaaaagcagtcagtacttctttttgcaagac-tacagttaattgagacacccatggagaat----ggtctcccaacaTTCATTTCCTAAAACTTCTTCAGTCTTGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083620 245 + 77229886 ctgacctttgttctggaggaaaacattatctttattaca-ctggacagcaaacaagcctgtcctttactctggagggaaacactatctctatcttccaaggctgtttgctatacaaagatgat-t-aaaaggtaatccagaacaaaagcagtcagtacttctttttgcaagac-tacagttaattgagacacccatggagaatggtcggtctcccaacaTTCATTTCCTAAAACTTCTTCAGTCTTGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304556 241 + 17472758 ctgacctttgttctggaggaaaacattatctttattaca-ctggacagcaaacaagcctgtcctttactctggagggaaacactatctctatcttccaaggctgtttgctatacaaagatgat-t-aaaaggtaatccagaacaaaagcagtcagtacttctttttgcaagac-tacagttagttgagacacccatggagaat----ggtctaccaacaTTCATTTCCTAAAACTTCTTCAGTCTTGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343473 241 - 152096393 ctgacatttgttctggaggaaaacattatctttattaca-ctgtacagcaaacaagcctgtcctttactctggagggaaacactatctctatcttccaaggctgtttgctatacaaagatgat-t-aaaaggtaatccagaacaaaagcagtcagtacttctttctgcaagac-tacagttaattgagacacccatggagaat----ggtctcccaacaTTCATTTCCTAAAACTTCTTCTGTCTTGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57296887 234 + 70235451 ctgatctttgttctggagggaaaca------ttattaca-ctggacagcaaataagcctgtcctttactcttcagagaaacactatctctatcttccaaggctgtttgctac-caaagatgat-t-aaaaggtaatccagaacaaaggcagtcagtacttctttttgcaagac-tacagttacttgagacacccatggagaat----ggtctcccaacaTTCATTTCCTAAAACTTCATCAGtcttgaa i rheMac8.chr18 C 0 I 1255 s macFas5.chr18 62988257 235 - 75711847 ctgatctttgttctggagggaaaca------ttattaca-ctggacagcaaataagcctgtcctttactcttcagggaaacactatctctatcttccaaggctgtttgctacacaaagatgat-t-aaaaggtaatccagaacaaaggcagtcagtacttctttttgcaagac-tacagttacttgagacacccatggagaat----gatctcccaacaTTCATTTCCTAAAACTTCTTCAGtcttgaa i macFas5.chr18 C 0 I 1298 s macNem1.NW_012016688v1 13540788 235 - 18804593 ctgatctttgttctggagggaaaca------ttattaca-ctggacagcaaataagcctgtcctttactcttcagggaaacactatctctatcttccaaggctgtttgctacacaaagatgat-t-aaaaggtaatccagaacaaaggcagtcagtacttctttttgcaagac-tacagttacttgagacacccatggagaat----ggtctcccaacaTTCATTTCCTAAAACTTCTTCAGtcttgaa i macNem1.NW_012016688v1 C 0 I 1471 s cerAty1.NW_012001075v1 13157775 231 + 18905526 ctgatctttgttctggagggaaaca------ttattaca-ctggacagcaaataagcctgtcctttactcttcagggaaaca----ctctctcttctaaggctgtttgctacacaaagatgat-t-aaaaggtaatccagaacaaaggcagtcagtacttctttttgcaagac-tacagttacttgagacacccatggagaat----ggtctcccaacaTTCATTTCCGAAAACTTCTTCAGtcttgaa i cerAty1.NW_012001075v1 C 0 I 1266 s chlSab2.chr18 59987431 235 - 72318688 ctgatctttgttctggaggggaaca------ttattaca-ctggacagcaaataagcctgtcctttactcttcagggaaaggctatctctattttccaaggctgtttgctacacaaagatgat-t-aaaaggtaataaagaacaaaggcagtcagtacttctttttgcaggac-tacagttacttgagacacccatggagaat----ggtctcccaacaTTCATTTCCTAAAACTTCTTCAGTCTTGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 321492 228 - 1517660 ctgatctttgttctggagggaaaca------ttactacg-ctggacagcaaataagcctgtcctttactcttcagggaaacactctctc----ttccaaggctgtttgctacacaaagatgat-t-aaaaggtaatccagaacaaaggcagtcagtactactttttgcaagac-tacagttacttgagacacccatggaga-------gtcccccaacaTTCATTTCCGAAAACTTCTTCAGtctttaa i manLeu1.NW_012106698v1 C 0 I 1266 s colAng1.NW_012115433v1 3421261 235 + 6513552 ctgacctttgttctggaaggaaaca------ttattaca-ctggacagcaaataagcctgtcctttactctggagggaaacgctatctctatcttccaaggctgtttgctacacaaagatgat-t-aaaaggtaatccagaacaaaggcagtcagtaattctttttgcaagac-tacagttatttgagacactcattgagaag----ggtctcccaacaTTCATTTCCTAAAACTTCTTCAGtcttgaa i colAng1.NW_012115433v1 C 0 I 1272 s calJac3.chr13 105202696 231 + 117903854 ctgacctttgttctggagggaaaca---tctttcttaca-ctagc-------caagtctgtcctttactccgtagggaaacactgtctctatcttccaaggccgtttgctatacaaatatgat-t-aaaaggcaatccagaacaaaggcagtcaggacttctttttgcaagac-tacagcaacttgacacacccacggagaat----ggtctctcaacaTTCATTTCCTAAATCTTCTTCAGTTTTGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394038 230 - 31320352 ctgacctctgttctggagggaaacg---tgtttcttaca-gtagccagagaacaagtctgtcctttactccacagggaatcactgtctctatcttccaaggccgtttgctatacaaacatgat-t-aaaaggcaatccagaacaaaggcagtcaggacttctttttccacaac-tacagcaacttgcgacacccatggagaat----ggtctctcaacaTTC-------AAATCTTCTTCAG-TATGGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583202 238 + 2203405 ctgacctttgttctggagggaaaca---tctttcttaca-ctggccagaaaacaagtccgtcctttactccacagggaaacactgtctctatcttccaaggccgtttgctatacaaatatgat-t-aaaaagcaatgcagaacaaaggcagtcaggacttctttttgcaaaac-tacagcaacttgagacatacatggggacc----ggtctctcaacaTTCATTTCCTAAATCTTCTTCAGTTTTGGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539578 238 - 14941987 ccgacctttgttatggagggaaaca---tctttcttaca-ctagccagaaaacaagtctgtcctttactccatagggatacactgtctctatcttccaaggccgtttgctatacaaatatgat-g-aaaaggcaatccagaacaaaggcagtcaggacttctttttgcaagac-tacatcaacttgagacacccatggagaat----tgtctgtcaacaTTCATTTCCTAAATCTTCTTCAGTTTTGGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206122 241 - 1406956 ctgacctttgccctgcaggaaaatggtatctttattata-ctggacagcaaattagcctgccctttattctacagggaaacactctctcgaatttccaaggttgtttgctatacggatatgattt-gaaaggtagtccagggcaaaggccgtcagtgcctcttcttgcaagacattcagaaacttgagatagccatggaggat----ggtcttccaacaTCTA-TTCCTAAAACTTCTCCAGCCTCAA- i proCoq1.NW_012148742v1 I 2080 C 0 s otoGar3.GL873546 11198620 238 - 20685099 ctgacttctgccctggagggaaccagtaactgtattaca-caggacagcaaagaatcccactttctactctagagggaaatgccatctctaatctct-gggctgtttgctatacagacatgatgt-gaatggtggtccagaacgaagccagacagtgccccttcttg-aaaacattcagaaactcgggacacgaatgcagaat-----gtcctccaGTATCTA-TTCCTAAAAAGTCTCCAGTCTCCA- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112267198 182 - 122678785 ctgacttttaacctag-------ta------tttttatatttagacatcaaat-agcctgccctttactccagaaggagaca--gtttctaatttacaaggatgtttgctttgcaagtagcct-tgaaaaggtgatcgaaaacagaggcagtc----------tttgcaagatgtgcagaaacttaagaggtccacagagaat----GTTCAA------------------------------------ i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 426389 243 - 2150887 cttggttttgtcctggcaggtaaaagtatctttatcaca-ttggacaggaaacaaacctgccctttcccttagagggagacaccatctctaatttcaaaggctgtttactatacaaatattgt-tgaaaacacagtccagaaaaagaacagtcagtgcctctgcctgcaagacatgaagaaatacaaaagatgcatagaaaat----ggtctcccagcaTCCATTTCCCAAAATTTCTCTGGCCTTGAA i dasNov3.JH575754 C 0 C 0 a score=54661.000000 s hg38.chr18_GL383571v1_alt 10880 5 + 198278 AGTGG s panTro5.chr18 64961524 5 + 78221452 AGTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083865 5 + 77229886 AGTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304797 5 + 17472758 AGTGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343714 5 - 152096393 AGTGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298376 5 + 70235451 AGTGT i rheMac8.chr18 I 1255 C 0 s macFas5.chr18 62989790 5 - 75711847 aGTGT i macFas5.chr18 I 1298 C 0 s macNem1.NW_012016688v1 13542494 5 - 18804593 AGTGT i macNem1.NW_012016688v1 I 1471 C 0 s cerAty1.NW_012001075v1 13159272 5 + 18905526 AGTGT i cerAty1.NW_012001075v1 I 1266 C 0 s chlSab2.chr18 59987666 5 - 72318688 AGTGG i chlSab2.chr18 C 0 I 1276 s manLeu1.NW_012106698v1 322986 5 - 1517660 AGTGT i manLeu1.NW_012106698v1 I 1266 C 0 s colAng1.NW_012115433v1 3422768 5 + 6513552 AGTGT i colAng1.NW_012115433v1 I 1272 C 0 s calJac3.chr13 105202927 5 + 117903854 AATGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394268 5 - 31320352 AATGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583440 5 + 2203405 AATGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539816 5 - 14941987 AATGT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206363 5 - 1406956 AGTGC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11198858 5 - 20685099 AGTGT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 426632 5 - 2150887 AGCCA i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112267380 0 - 122678785 C a score=25398.000000 s hg38.chr18_GL383571v1_alt 10885 2 + 198278 GA s panTro5.chr18 64961529 2 + 78221452 GA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083870 2 + 77229886 GA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304802 2 + 17472758 GA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343719 2 - 152096393 GA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298381 2 + 70235451 GA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62989795 2 - 75711847 GA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542499 2 - 18804593 GA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159277 2 + 18905526 GA i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 322991 2 - 1517660 GA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3422773 2 + 6513552 GA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105202932 2 + 117903854 GA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394273 2 - 31320352 GA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583445 2 + 2203405 GA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539821 2 - 14941987 GA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206368 2 - 1406956 CA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11198863 2 - 20685099 GA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 426637 2 - 2150887 GA i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112267380 0 - 122678785 C e chlSab2.chr18 59987671 1276 - 72318688 I a score=805267.000000 s hg38.chr18_GL383571v1_alt 10887 65 + 198278 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TACCCTAATCAAGTAAACCTTACACA s panTro5.chr18 64961531 65 + 78221452 TCTTCCCTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TACCCTAATCAAGTAAACCTTACACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083872 65 + 77229886 TCTTCCCTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TACCCTAATCAAGTAAACCTTACACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304804 65 + 17472758 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TACCCTAATCAAGTAAACCTTACACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343721 65 - 152096393 TCTTCCTTTCTCTTCTCTATTCCTATAGCATCCTATACA-------------------TACCCTAATCAAGTAAATCTTACACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298383 65 + 70235451 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATATA-------------------TATCCTAATCAAGTAACTCTTACACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62989797 65 - 75711847 TCTTCCTTTCTCCTCTCTTTTCCTATAGCATCCTATATA-------------------TATCCTAATCAAGTAACTCTTACACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542501 65 - 18804593 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATATA-------------------TATCCTAATCAAGTAACTCTTACACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159279 65 + 18905526 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TATCCTAATCAAGTAACTCTTACACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59988947 65 - 72318688 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TATCCTAATCAAGTAACTCTTACACA i chlSab2.chr18 I 1276 C 0 s manLeu1.NW_012106698v1 322993 65 - 1517660 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TATCCTAATCAAGTAACTCTTACACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3422775 65 + 6513552 TCTTCCTTTCTCCTCTCTATTCCTATAGCATCCTATACA-------------------TATCCTAATCAAGTAACTCTTACACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105202934 65 + 117903854 TCTTCCCCTCTCCTCTCTATTCCTATAGCATCCTATATG-------------------TACCCTAATCAAGTGAAGCTTACACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394275 65 - 31320352 TCTTCCTCTCTCCTCTGTATTCCTATAGCATCCTATACA-------------------TACCCTAATCCAGTGAAGCTTACACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583447 65 + 2203405 TCTTCCCCTCTCCTCTCTCTTCTTGTAGCATCCTATACA-------------------TACCCTAATCAAGTGAAGCTTACACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539823 65 - 14941987 TCTTCCCCTCTCCTCTCTATTCCTATAGCCTCCTATATG-------------------TACCCTAATCAAGTGAAGGTTACACA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206370 65 - 1406956 CCCTCCTTTCTCCTCCCTAGTCATATAGCATCCCGTGCA-------------------TACCCTAATCAAGTAAATCTTACACA i proCoq1.NW_012148742v1 C 0 I 46 s otoGar3.GL873546 11198865 78 - 20685099 CCCTCCTTTCTCCTCT----TCATGTAGCATGCAGCACACATGGATGCACCACAGATTCACCACCATCAAGTGAGTCTTACA-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112267380 56 - 122678785 ---------CTCTTTTCTATTCATGTAGCATCCTGCGCA-------------------TACCCAAGTCGAGTAAACCTTATGCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 426639 47 - 2150887 --------CCTCCGCT----------GGCATCCTGTACA-------------------AAGCCCAGATCAGTAAACATTGCACA i dasNov3.JH575754 C 0 I 37 a score=240095.000000 s hg38.chr18_GL383571v1_alt 10952 26 + 198278 CTCTGTTGCAATTTCCTGTTTCTATG s panTro5.chr18 64961596 26 + 78221452 CTCTGCTGCAATTTCCTGTTTCTATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083937 26 + 77229886 TTCTGCTGCAATTTCCTGTTTCTATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304869 26 + 17472758 CTCTGTTGCAATTTCCTGTTTCTATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343786 26 - 152096393 CTCTGTTGCAATTTCCTGTTCCTATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298448 26 + 70235451 CACTGTTGCAATTTCCTATTCCTATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62989862 26 - 75711847 CACTGTTGCAATTTCCTATTCCTATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542566 26 - 18804593 CACTGTTGCAATTTCCTATTCCTATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159344 26 + 18905526 CACTGTTGCAATTTCCTATTCCTATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989012 26 - 72318688 CACTGTTGCAATTTCCTATTCCTATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323058 26 - 1517660 CACTGTTGCAATTTCCTATTCCTATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3422840 26 + 6513552 CACTGTTGCAATTTCCTATTCCTATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105202999 24 + 117903854 CTCT--TGTAATTTTCTGTTCCTATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394340 24 - 31320352 CTCT--TGCAATTTTCTGTTCCTATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583512 24 + 2203405 CTCT--TGTAATTTTCTGTTCCTAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539888 24 - 14941987 CTCT--TGTAATTTTCTGTTCCTATA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11198943 26 - 20685099 CTGCATCGAAATTGTCAGTTTCTAAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112267436 26 - 122678785 CTGTTTTGCAATTTTCTGTTTCTTTG i canFam3.chr1 C 0 I 10 e proCoq1.NW_012148742v1 1206435 46 - 1406956 I e dasNov3.JH575754 426686 37 - 2150887 I a score=166939.000000 s hg38.chr18_GL383571v1_alt 10978 21 + 198278 Atgttaaacaaaaattata-ga s panTro5.chr18 64961622 21 + 78221452 Atgttaaacaaaaattaca-ga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083963 21 + 77229886 Atgttaaacaaaaattaca-ga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304895 21 + 17472758 ACgttaaacaaaaattata-ga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343812 21 - 152096393 Atgttaaacaaaaattata-ca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298474 22 + 70235451 Atgttaaacaaaaattatagga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62989888 22 - 75711847 Atgttaaacaaaaattatagga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542592 22 - 18804593 Atgttaaacaaaaattatagga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159370 18 + 18905526 ATGTt----aaaaattatagga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989038 22 - 72318688 Atgttaaacaaaaattatagga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323084 18 - 1517660 ATGTt----aaaaattatagga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3422866 22 + 6513552 Atgttaaacaaaaattatagga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203023 22 + 117903854 AGAttaaacaaaaattaaaggg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394364 22 - 31320352 AGAttaaacaaaaattagaggc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583536 22 + 2203405 AGAttacacaaaaattagagga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539912 22 - 14941987 AGAttaaacaaaaattagagga i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11198969 22 - 20685099 Atgtcaaacaaaaactatggga i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1206435 46 - 1406956 I e dasNov3.JH575754 426686 37 - 2150887 I e canFam3.chr1 112267462 10 - 122678785 I a score=1010243.000000 s hg38.chr18_GL383571v1_alt 10999 90 + 198278 ggtcattatttgcactcagtccttacactaagccccgacagagctgaccaaaccaaaatggagtcactcatgctaaatgccacataatca s panTro5.chr18 64961643 90 + 78221452 ggtcattatctgcactcagtccttacactaagccccgacagagctgaccaaaccaaaatggagtcactcatgctaaatgccacataatca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64083984 90 + 77229886 ggtcattatctgcactcagtccttacactaagccccgacagagctgaccaaaccaaaatggagtcactcatgctaaatgccacataatca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5304916 90 + 17472758 ggtcattatttgcactcagtccttacactaagccccgacagagctgaccaaaccaaaatggagtcactcatgctaaatgccatatagtca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343833 90 - 152096393 ggtcattatttgcactcagtccttacactaggccctgacagagctgaccaaaccaaaatgaagtcactcacgctaaatgccacataatca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298496 90 + 70235451 ggacattatttgcactcagtccttacactaggccctgccagagcttaccaaagcaaaatggagttactcatgctaaatgccacgtaatca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62989910 90 - 75711847 ggacattatttgcactcagtccttacactaggccctgccagagcttaccaaagcaaaatggagttactcatgctaaatgccacgtaatca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542614 90 - 18804593 ggccattatttgcactcagtccttacactaggccctgccagagcttaccaaagcaaaatggagttactcatgctaaatgccacgtaatca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159388 90 + 18905526 ggccattatttgcactcagtccttacactaggccctgccagagcttaccaaagcaaaatggagttactcatgctaaatgccacataatca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989060 90 - 72318688 ggccattatttgcactcagtccttacactaggccctgccagagcttaccaaagcaaaatggagttactcatgctaaatgccacataatca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323102 90 - 1517660 ggccattatttgcactcggtccttacactaggccctgccagagcttaccaaagcaaaatagagttactcatgctaaatgccacataatca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3422888 90 + 6513552 ggccattatttgcactcagtccttacactaggccctgccagagcttaccaaagcaaaatgaagtcactcatgctaaatgccacataatca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203045 90 + 117903854 gaccattttttgcactcagtccttacactaggccctgacaaagctgaccaaaccaaagtggagtcattcaaactaaatgccacctaatca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394386 90 - 31320352 agccatttttcacactcagtccttacactaggccttgacagagctgaccaaaccaaaatggagtcactcacactaaatgccatatcatca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583558 89 + 2203405 tgccattttt-gcacttagtccttacactaggccctgacagagctgaccaaaccaaaatggagtcactcacactaaatgccacataatca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3539934 90 - 14941987 ggccattttttgcactcggtccctacactaggctctgacagagctgaccaaaccaaaatggagtcactcacactaaatgccacataatca i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206481 89 - 1406956 ggtcattatttgtactgagctcctacactaggccctaacagaccagaccaaacgaaaatgg-gtcactcatgcttaatgccacataatca i proCoq1.NW_012148742v1 I 46 I 288 s otoGar3.GL873546 11198991 88 - 20685099 ggtcgtccctgggactgagctcctacactaggccctaatggaccagaccaaacccaaatgg-gtcacttgtgc-taacaccacaaagtca i otoGar3.GL873546 C 0 C 0 e dasNov3.JH575754 426686 37 - 2150887 I e canFam3.chr1 112267462 10 - 122678785 I a score=2397927.000000 s hg38.chr18_GL383571v1_alt 11089 266 + 198278 gagattataaggaagcagatagaccctgaaacggatcagctt------ttcttaaaaacaggcgaatacagtct----------------------accggagtgagcataatgaagaagccccctctgctttaattcttacaaaaaagtaacctaaagtaatctaacttcaccaatt-ggg---ggtttttattactattattgttctgtttacttgtttccaccttacaaaagccactgctctgctattgcccagtgggagctttcactgtatttt-----------------------------------gtaaaagccaattcgatttg s panTro5.chr18 64961733 266 + 78221452 gagattataaggaagcagatagaccctgaaacagatcagctt------ttcttaaaaacaggtgaatacagtct----------------------actggagtgagcataatgaagaagccccctctgctttaattcttacaaaaaagtaacctaaagtaatctaacttcaccaatt-gag---ggtttttattactattattgttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtgggagctttcactgtatttt-----------------------------------gtaaaagccaattcgatttg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084074 266 + 77229886 gagattataaggaagcagatagaccctgaaacagatcagctt------ttcttaaaaacaggtgaatacagtct----------------------actggagtgagcataatgaagaagccccctctgctttaattcttacaaaaaagtaacctaaagtaatctaacttcaccaatt-gag---ggtttttattactattattgttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtgggagctttcactgtatttt-----------------------------------gtaaaagccaattcgatttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305006 264 + 17472758 gagattataaggaagcagatagaccctgaaacagatcagctt------ttcttaaaaacaggcgaatac-gtct----------------------accggagtgagcataatgaagaagccccttctgctttaattcttacaaaaaagtaacctaaagtaatctaacttcaccaatt-g-g---ggtttttattactattattgttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtgggagctttcactgtatttt-----------------------------------gtaaaagccaattcgatttg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139343923 266 - 152096393 gagattataaggaagcagatagaccctgaaacagatcagctt------ttcttaaaaacaggcgattacagtct----------------------aactgggtgagcataataaagaagccccctctgctttaattcttacaaaaaagtaacctaaagtaatctaacgtcaccaatc-ggg---ggggtttattactattattgttctgtttacttgcttccaccttacaaaacccactgctccgctattgcccagtgggagctctcactgtatttt-----------------------------------gtaaaagccaattagatctg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298586 262 + 70235451 gaggttataaggaagcagatagaccctgaaac--atcagctt------tccttaaaaacaggagattacagtct----------------------accggagtgagcataataaagaagccccctctgctttaattcttacaaaaaagtaacctaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtggaaactttcactgtatttt-----------------------------------gtaaaagccaattagatctg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990000 262 - 75711847 gaggttataaggaagcagatagaccctgaaac--atcagctt------tccttaaaaacaggagattacagtct----------------------accggagtgagcataataaagaagccccctctgctttaattcttacaaaaaagtaacctaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtggaaactttcactgtatttt-----------------------------------gtaaaagccaattagatctg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542704 262 - 18804593 gaggttataaggaagcagatagaccctgaaac--atcagctt------tccttaaaaacaggagattacagtct----------------------accggagtgagcataataaagaagccccctctgctttaattcttacaaaaaagtaacctaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtggaaactttcactgtatttt-----------------------------------gtaaaagccaattagatctg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159478 284 + 18905526 gagattataaggaagcagatagaccctgaaac--atcagctt------tccttaaaaacaggagattacagtctcctgtaattctttattatgctcacctgagtgagcataataaagaagccccctctgctttaattcttacaaaaaagtaacctaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttccacctcacaaaacccactgctctgctattgcccagtggaagctttcactgtatttt-----------------------------------gtaaaagccaattagatctg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989150 258 - 72318688 gagattataaggaagc----agaccctgaaac--atcagctt------tccttaaaaacaggagattacagtca----------------------atctgagtgagcataataaagaagccccctctgctttaattcttacaaaaaagtaacctaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttctaccttacaaaacccactgctctgctattgcccagtggaagctttcactgtatttt-----------------------------------gtaaaagccaattagatgtg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323192 262 - 1517660 gagattataaggaagcagatagaccctgaaac--atcagctt------tccttaaaaacaggagattacagtct----------------------acctgagtgagcataataaagaaggcccctctgctttaattcttacaaaaaagtaacctaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttccacctcacaaaacccactgctctgctattgcccagtggaagctttcactgtatttt-----------------------------------gtaaaagccaattagatctg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3422978 264 + 6513552 gagattataaggaagcatacagaccctgaaacagatcagctt------tccttaaaaacaggtaaatacagtct----------------------acctgagtgagcctaataaagaagccccctctgctttaattcttacaaaaaagtaacttaaagttatctaacgtcaccaattaggg---ggtttttattactatta---ttctgtttacttgtttccaccttacaaaacccactgctctgctattgcccagtggaagctttcactgtatttt-----------------------------------gtaaacgccaattagatctg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203135 269 + 117903854 gagattgtaaggaaga----agatcccaaaacagatcagacctgctttttcttaaaagcaggtgattAcagtct----------------------acctgagtcaggataataaaaaatccccttctgctttaactattataaaagggtaacctaaagcaacctaaggtcaccaatcagggctttagtattattattattattgttctgtttacttgtttcaagcttacaaaaccccctgctctgatattgccca--gagagctctcactgtatttt-----------------------------------gtaaaagccaa-tatatctg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394476 260 - 31320352 gagattttaaggaagc----agatcccaaaacagatcagatc------ttcttaaaaccaggtgattacagtct----------------------acctgagtcaggataataaagaattcccttctgctttaactattacaaaagggtaacctaaagtaacctaaggtcaacaatcagga---gatttttattactattgttgttctgtttacttgtttcaaccttacaaaacccaccgctctgatattgccca--gagagctctctctgtatttt-----------------------------------gtaaaagccaa-tatatctg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583647 260 + 2203405 gagattttaaggaagc----agatcccaaaacagatcagatc------ttcttaaaagcaggtgattacagtct----------------------acctgagtcaggataatagagaatccccttctgctttaactattacaaaagggtaacctaaagtaacctaaggtcaccaatcagga---gtttattattattatcattgttctgtttacttgtttcaaccttacaaaacccactgctctgatattgccca--gagagctctcactgtatttt-----------------------------------gtaaaaGTCAA-TGTATCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540024 260 - 14941987 gagattttaaggaagc----agatcccaaaacagatcagatc------ttcttaaaagcaggtgattacagtct----------------------acctgagtcaggataataaagaatccccatctgctttaactattacaaaagggtaacctaaagtaacttaaggtcaccaatcaggg---gttttttattattattattgttctgtttacttgtttcaaccttacaaaacccactgctccgatattgccca--gagagctctcactgtatttt-----------------------------------gtaaaagccaa-tatatctg i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11199079 246 - 20685099 -----------------------aactgaaac--------tt------tac-----------aaattacagtcc----------------------acctgggtctgtagcataaggaagtcccttctgcttctactcttataagaaagtgacctcatgt---------tcactagt--------tttttttttcacccttactgttctgttctcttgtttccgccttgtaaaagccccagttctgctattgcccaaggggaactcttattttattttatagaatgaaggctgccttgattcatgaattgtaaataaaagccaattacatcta i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1206570 288 - 1406956 I e dasNov3.JH575754 426686 37 - 2150887 I e canFam3.chr1 112267462 10 - 122678785 I a score=629346.000000 s hg38.chr18_GL383571v1_alt 11355 58 + 198278 taactaaatgtgttgtaactttgt-cttttgacaTTGGTTAAAAACAGctatcactatt s panTro5.chr18 64961999 58 + 78221452 taactaaatgtgttgtaactttgt-cttttgacaTTGGTTAAAAACAGCTATCACTATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084340 58 + 77229886 taactaaatgtgttgtaagtttgt-cttttgacaTTGGTTAAAAACAGCTATCACTATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305270 58 + 17472758 taactaaatgtgttgtaactttgt-cttttgacaTTGGTTAAAAACAGCTATCACTATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344189 58 - 152096393 taactaaatatgttgtaactttgt-cctttgacaTTGGTTAAAAACAactatcactatt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298848 57 + 70235451 taactaaatgtgttgtaa-tttgt-cctttgacaTTGGTTAAAAACAACTGTCACCATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990262 57 - 75711847 taactaaatgtgttgtaa-tttgt-cctttgacaTTGGTTAAAAACAACTATCACCATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13542966 57 - 18804593 taactaaatgtgttgtaa-tttgt-cctttgacaTTGGTTAAAAACAACTATCACCATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159762 51 + 18905526 taactaaatgtgttgtaa-tttgt-cctttgacaTTGGTTAAAAACAACT------ATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989408 57 - 72318688 taactaaatgtgttgtaa-tttgt-cctttgacGTTGGTTAAAAACAACTATCACTATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323454 51 - 1517660 taactaaatgtgttgtaa-tttgt-cctttgacaTTGGTTAAAAACA------ACTATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423242 57 + 6513552 taactaaatgtgttgtaa-tttgt-cctttgacaTTGGTTAAAAACAACTATCACTATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203404 58 + 117903854 taactaaaggtgttgtagttttgt-tttttgacaTTGGTTAAAAACAACTACCACTATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394736 58 - 31320352 taactaaaggtgttgtaattttgt-tttttgacaTTGGTTAAAAACAACTACCACTATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583907 58 + 2203405 TAACTAAAGGTGTTGTAATTTTGT-TTTTTGACATTGATTAAAAACaactaccactatt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540284 58 - 14941987 taactaaaggtgttgtaattttgt-tttttgacaTTGGTTAAAAACAACTATCACTATT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206858 58 - 1406956 taactaaatctgttgtaatgttgt-cttttggcacTGGTtaaatataactatcactacc i proCoq1.NW_012148742v1 I 288 C 0 s otoGar3.GL873546 11199325 59 - 20685099 taactaaatttcttataattctgtattttTTACATTGGTTAAAAACAACTATCACAACC i otoGar3.GL873546 C 0 C 0 e dasNov3.JH575754 426686 37 - 2150887 I e canFam3.chr1 112267462 10 - 122678785 I a score=15561.000000 s hg38.chr18_GL383571v1_alt 11413 1 + 198278 a s panTro5.chr18 64962057 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084398 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305328 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344247 1 - 152096393 a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298905 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990319 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543023 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159813 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989465 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323505 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423299 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203462 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394794 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583965 1 + 2203405 a i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540342 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206916 1 - 1406956 a i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11199384 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 426723 1 - 2150887 A i dasNov3.JH575754 I 37 C 0 e canFam3.chr1 112267462 10 - 122678785 I a score=2127253.000000 s hg38.chr18_GL383571v1_alt 11414 178 + 198278 ctacaacttatcactcatacctatCTTCA--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGG----GGTAATACTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAATGCCTACATAAACTGGCATTATCCACAGGCAAA s panTro5.chr18 64962058 178 + 78221452 CTACAACTTTTCACTCATACCTATCTTCA--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGG----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAATGCCTACATAAACTGGCATTATCCACAGGCAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084399 178 + 77229886 CTACAACTTTTCACTCATACCTATCTTCA--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGG----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAATGCCTACATAAACTGGCATTATCCACAGGCAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305329 177 + 17472758 CTACAACTTTTCACTCATACCTATCTTCA--TTGTTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAACATTTTTGTGTGAATTAATAAAATAATGATTGAT-G----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAATGCCTACATAAACTGGCATTATCCACAGGCAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344248 169 - 152096393 ctacaa-gtatcactcatacctatcTTCA--TTATTTTCAGCAAATAT-TCTAATAAAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTTATGG----GGTAATATTTGGCAGAAAAGCAAA-------------------------AT-----AAAACAATGCCTACATAAACTGGC---ATCCACAGGCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57298906 177 + 70235451 CTACAA-CTATCACTTGTATCTATCTTCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGC----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAGTGCCTACACAAACTGGCATTATCCACAAGCAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990320 177 - 75711847 CTACAA-CTATCACTTGTATCTATCTTCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGC----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAGTGCCTACACAAACTGGCATTATCCACAAGCAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543024 176 - 18804593 CTACAA-CTATCACTTGTATCTATCTTCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAA-CCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGC----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAGTGCCTACACAAACTGGCATTATCCACAAGCAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159814 177 + 18905526 CTACAA-CTATCACTTGTATCTATCTTCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGC----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAGTGCCTACACAAACTGGCATTATCCACAAGCAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989466 177 - 72318688 CTACAA-CTATCACTTGTATCTATCTTTG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGG----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAGTGCCTACACAAACTGGCATTATCCACAAGCAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323506 177 - 1517660 CTACAA-CTATCACTTGTATCTATCTTCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACCCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATGC----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACAAAACAGTGCCTACACAAACTGGCATTATCCACAAGCAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423300 174 + 6513552 CTACAA-CTATCACTCGTATCTATCTTCG-----TTTTCAGCACATAT-TCTAATACAAAGTGACCCCTGCAAATATTTTTGTGTCGATTAATAAAATAATGATTGATGG----GGTAATATTTGGCAGAAAAGCAAA-------------------------ATAAAACACAACAATGCCTACACAAACTGGCACTATCCACAAGCAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203463 176 + 117903854 CTACAA-CTATCACTCATATCTATTTTCA--TTATTTTCAGCAAATAT-TCTAATATAAAGTAATTATTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATAG----GGTAATA-TTGACAGAAAAGCAAA-------------------------ATGAAACAAAATAATGCCTACATAAACTGGCATTATTCACAGGCAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394795 177 - 31320352 CTACAA-CTATCACTCATATCTCTTTTCA--TTATTTTCAGCAAATAT-TCTAACATAAAGTAACTCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATAG----GATAATATTTGACAGAAAAGCAAA-------------------------ATAAAACAAAATAATGCCTACATAAACTGGCATTATCCACAGGCAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1583966 177 + 2203405 ctacaa-ctatcactcatatctatTTGCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAATTCCTGCAAATATTTTTGTGTGAATTAATAAAATAGTGATTGATAG----GGTAATATTTGACAGAAAAGCAAA-------------------------ATAAAACAAAATAATGCCTATATAAACTGGCATTATCCACAGGCAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540343 177 - 14941987 CTACAG-CTATCACTCATATCTATTTTCG--TTATTTTCAGCAAATAT-TCTAATATAAAGTAACTCCTGCAAATATTTTTGTGTGAATTAATAAAATAATGATTGATAG----GGTAATATTTGACAGAAAAGCAAA-------------------------ATAAAACAAAATAATGCCTACATAAACTGGCATTATCCACAGGCAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1206917 173 - 1406956 ctgcaa-ctatcactcatatctGTCTCTC--TTATTTTCAGCAAAAAT-TCTGATACAAAGGAGGCCCGATAAATGTTTTTGTGTACATTAATAAAAGAATTAGTGATGG----GTTAATATTTGATAAATAAA-----------------------------ACAAAACAAAATAATGCCTGCATAAACTTACATTATCCCCAGGGGAA i proCoq1.NW_012148742v1 C 0 I 43 s otoGar3.GL873546 11199385 204 - 20685099 CTGCAA-CTATCACTCAGATCTATCACTC--ATGTTTTTAGCAAAAAT-CTTGATGTAAAGTAGACCCAGTAAATATTTCTTTGTTAGTTAACAAAAGAATGAATGATAGGTTAGTTAATATTTGACACAaaaagaaaagaagaaaagaacagataggaaaagaaaagaaaagagaaTGCCTGCATAAACTTGTGTTAGCTCCAGGGG-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112267472 165 - 122678785 CTGCAA-CTACTCCTTATACCTGTCTTCT--TTATTTTCAGCTAAAAC-TGTGACACTGAGTGGCCCTAGTTAATATCTTCTAACAAGTTAATTTAAAAATGAGTGATGG----ATTGATATTAGGCAGAGGGG--AA-------------------------AAAAAGCAA---------TATATAAATTTGCATTCTCCAT-GGCATG i canFam3.chr1 I 10 I 3 s dasNov3.JH575754 426724 147 - 2150887 CTGTAA-ATTTTATTCAGATCTGCTCTCCCCTTATTTTCAGGAAAAATCCCTGACACTAAGTGGCTCCAGTAAACATTTATGAGTGAGTTAATAAAGGAATGAATGATGG----ATTA------------------AG-------------------------GTA---------------TGCATACACTGGAATTTTCCACAGGGGAT i dasNov3.JH575754 C 0 C 0 a score=436361.000000 s hg38.chr18_GL383571v1_alt 11592 39 + 198278 AAGG---GAATCACTTTTCAAAAGGAAATCTTGGTTACTAAC s panTro5.chr18 64962236 39 + 78221452 AAGG---GAATCACTTTTCAAAAGGAAATCTTGGTTACTAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084577 39 + 77229886 AAGG---GAATCACTTTTCAAAAGGAAATCTTGGTTACTAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305506 39 + 17472758 AAGG---GAATCACTTTTCAAAAGGAAATCTTGGTTACTAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344417 39 - 152096393 AAGG---GAATCACTTTTTAAAAGGAAATCTTGGTTACTAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299083 39 + 70235451 AAGG---GAATCACTTTTTAAAAGGAAATCTAGGTTACTAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990497 39 - 75711847 AAGG---GAATCACTTTTTAAAAGGAAATCTAGGTTACTAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543200 39 - 18804593 AAGG---GAATAACTTTTTAAAAGGAAATCTAGGTTACTAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13159991 39 + 18905526 AAGC---GAATCACTTTTTAAAAGGAAATCTAGGTTACTAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989643 39 - 72318688 AAGG---GAATCACTTTTTAAAAGGAAATCTAGGTTACTAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323683 39 - 1517660 AAGG---GAATCACTTTTTAAAAGGAAATCTAGGTTACTAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423474 39 + 6513552 AAGG---GAATCACTTTTTAAAAGGAAATCTAGGTTACTAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203639 42 + 117903854 AAGGGAAGAATCACTTTTTAAAAAGAAATCTAGTTTACTAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19394972 42 - 31320352 AAGGGAAGAATCACTTTTTAAAAAGAAATCTAGAGTACAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1584143 42 + 2203405 AAGGGAAGAATCACTTTTTAAAAAGAAATCTAGGGTACAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540520 41 - 14941987 AAGGGAAGAATCAC-TTTTAAAAAGAAATCTAGTTTATTAAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11199589 39 - 20685099 AAGA---ACATAATTTTTTCAAAAGAGATCTGGGTTACTAAC i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112267640 39 - 122678785 GGGG---GAATACTTTTTAAAAACGGAATCCAGGCGACTAAT i canFam3.chr1 I 3 I 1 s dasNov3.JH575754 426871 38 - 2150887 AAAA---GAATCATTTTTTAAAAGAAAA-CCAATTTACTAAT i dasNov3.JH575754 C 0 I 1 e proCoq1.NW_012148742v1 1207090 43 - 1406956 I a score=1085367.000000 s hg38.chr18_GL383571v1_alt 11631 79 + 198278 AGAAATTTAAACTATAAATT--TTGGATAGTGTCAATAGGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAAGA-CAACCA s panTro5.chr18 64962275 79 + 78221452 AGAAATTTAAACTATAAATT--TTGGATAGTGTCAATAGGTAT-ATTTTTA-GTAGATAGTCTTCGGTGAT--AAAAGA-CAACCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084616 79 + 77229886 AGAAATTTAAACTATAAATT--TTGGATAGTGTCAATAGGTAT-ATTTTTA-GTAGATAGTCTTCGGTGAT--AAAAGA-CAACCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305545 79 + 17472758 AGAAATTTAAACTATAAATT--TTGGATAGTGTCAATAGGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAAGA-CAACCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344456 79 - 152096393 AGAAATTTAAACTATAAATT--TTGGATAGTGTCAATAGGTAT-ATTCTTA-GTAGATAGCCTTCAGTGAT--AAAAGA-CAACCG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299122 79 + 70235451 AGAAATTTAAACTATAAATT--GTGGATAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAAGA-CAACCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990536 79 - 75711847 AGAAATTTAAACTATAAATT--GTGGATAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAAGA-CAACCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543239 79 - 18804593 AGAAATTTAAACTATAAATT--GTGGATAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAAGA-CAACCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160030 79 + 18905526 AGAAATTTAAACTATAAATT--GTGGATAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGGT--AAAAGA-CAACCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989682 79 - 72318688 AGAAATTTAAACTATAAATT--GTGGATAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAATA-CAACCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323722 79 - 1517660 AGAAATTTAAACTATAAATT--GTGGATAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGGT--AAAAGA-CAACCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423513 79 + 6513552 AGAAATTCAAACTATAAATT--GTGGAAAGTGTCAATAAGTAT-ATTTTTA-GTAGATAGTCTTCAGTGAT--AAAAGA-CAACCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203681 79 + 117903854 AGAAATTTAAACTATCAATT--GTAGATAGTGTCAATAAGTAT-AATTTTA-GTAGATACTCTTCAGTGAT--AAAAGA-CAACCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395014 79 - 31320352 AGAAATTTAAACTATCAATT--GTAGATAGTGTCAATAAGTGT-ATTATTA-GTAGACAGTCTTCAGTGAT--AAAAGA-CAACCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1584185 81 + 2203405 AGAAATTTAAACTATCAATT--GTAGATAGTGTCAACAAGTAT-ATTTTCA-GTAGATAGTCTTCAGTGATAAAAAAGA-CAACCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540561 79 - 14941987 AGAAATTTAAACTATCAATT--GTAAATAGTGTCAATAAGTAT-ATTTTTA-ATAGATAGTCTTCAGTGAT--AAAAGA-CAACCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1207133 80 - 1406956 AGAAATTTTAACTATAAATT--GTAGATACTTTCAATAAAAAT-AATTTTTAGTAGATAGTCTTCAGTGAT--GAAAGA-TAACCA i proCoq1.NW_012148742v1 I 43 I 4791 s otoGar3.GL873546 11199629 80 - 20685099 AGAAATTTTAAATAAGAATT--GTGGGTTGCTTTCATAAAAGT-AATTTTT-GTAAATACTCTTCAGTAAT--AAAAGATTAACCA i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112267680 81 - 122678785 AAAAATTTAAACCATAAATTTAGTATATAGTCTCAATAAAGTA-ATTCTTA-GTGGAAAGTCTCCCATGAT--GAAAGA-CACCCA i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 426910 80 - 2150887 AAAAATTTAAACTATAAATT--TTGCATAGTCTCAATATAAGTAATTTTTA-GTAGATAGTCGTCAGGGAT--GAAAGA-CAGCCA i dasNov3.JH575754 I 1 C 0 a score=3371751.000000 s hg38.chr18_GL383571v1_alt 11710 266 + 198278 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTGTGTCCAAAGATGCAAAA-GTCTTCAAAGGCAACATTCGACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTGAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCTCA-CAAAAGTATTATAATGCTATGCTAGTGGACT s panTro5.chr18 64962354 266 + 78221452 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTGTGTCCAAAGATGCAAAA-GTCTTCAAAGGCAACATTCGACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTGAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCTCA-CAAAAGTATTATAATGCTATGCTAGTGGAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084695 266 + 77229886 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTGTGTCCAAAGATGCAAAA-GTCTTCAAAGGCAACATTCGACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTGAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCTCA-CAAAAGTATTATAATGCTATGCTAGTGGAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305624 266 + 17472758 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTGTGTCCAAAGATGCAAAA-GTCTTCAAAGGCAACATTCGACTTCAAAGCAGCACACAATGCACTCATAGAAGGTGGCTTCTTGAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCTCA-CAAAAGTATTATAATGCTATGCTAGTGGAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344535 266 - 152096393 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTGTGACCAAAGATGCAAAA-GCCTTCAAAGGCAACATTCAACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCTCA-CAAAAGTATCATAATGCTATGCTAGTGAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299201 267 + 70235451 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTATGTCCAAAGATGCAAAA-GCCTTCAAAGGCAGCATTCAACTTCAAAGGAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCTTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCCCCTCAAAAGTATCATAATGCTATGCTACTGAAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990615 267 - 75711847 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTATGTCCAAAGATGCAAAA-GCCTTCAAAGGCAGCATTCAACTTCAAAGGAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCTTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCCCCTCAAAAGTATCATAATGCTATGCTACTGAAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543318 267 - 18804593 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTATGTCCAAAGATGCAAAA-GCCTTCAAAGGCAGCATTCAACTTCAAAGGAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCTTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCCCCTCAAAAGTATCATAATGCTATGCTAGTGAAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160109 267 + 18905526 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTATGTCCAAAGATGCAAAC-GCCTTCAAAGGCAGCATTCAACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCCCCTCAAAAGTATCATAATGCTATGCTAGTGAAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59989761 267 - 72318688 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTATGTCCAAAGATGCAAAA-GCCTTCAAAGGCAGCATTCAACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCTTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCCCCTCAAAAGTATCATAATGCTATGCTAGTGAAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 323801 267 - 1517660 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAAGTCTATGTCCAAAGATGCAAAA-GCCTTCAAAGGCAACATTCAACTTCAAAGCAGCACACAATGCACTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGCCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTGCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATAGGCTTTGAAATGCCCCCTCAAAAGTATCATAATGCTATGCTAGTGAAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423592 267 + 6513552 CCATTTTCAATCTCTTTTGGTTACAAATATATTAGAAAAGCCTACGTCCAAAGATGCAAAA-GCCTTCAAAGGCAACATTCAACTTCAAAGCAGCACACAACGCACTCATAGAGGGTGGCTTCTTTAAGGCGTTTTCCAGTCTTGCCTGAGTCTTTGTAATACAAAACCAGTCTTTTAATGTTAGTGCAT-AAAAA-GAC-AAAGTTTCAGGAAAGAATATAGGCTTCGAAATGCCCCCTCAAAAGTACCATAATGCTATGCTAGTGAAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105203760 267 + 117903854 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAGGTCTATGTTCAAAGACGCAAAAAGTCTTCAAAGGCAACATTCAACTACAAAGAAGCACACAATGCATTCATAGAGGGTGGCGTCTTTAAGGGTTTTTCCAGTCTTGTCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTCCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATATGCTTTGAAATGCTCTG-CAAAAGTATCATAATGCAATGCTAGTGAAGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395093 267 - 31320352 CCATTTTCAATCTCTTTTGATTACAAGTGTATTAGAAAGGTCTATGTTCAAAGATGCAAAAAGTCTTCAAAGGCAACATTCAACTACAAAGAAGGATACAATGCATTCATAGAGGGTGGCTTCTTTAAGGCTTTTTCCAGTCTTGTCTGAGTTTTTGTAAGATAAAACCAGTCTTTTAAAGCTAGTCCAT-AAAAA-GAC-AAAGTCTCAGAAAAGAATATATGCTTTGAAATGCCCTG-CAAAAGTATCATAATGCAATGCTAGTGAAGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1584266 266 + 2203405 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAGATCTATGTTCAAAGATTCAAAACGTCTTCAAAGGC-ACATTCAATTACAAAGCAGCACAC-ATGCATTCATAGAGGGTGGCTTCTTTAAGGGTTTTTCCAGTCTTGTCTGAGTTTTTGTAATATAAAACCAGTCTTTTAAAGTTAGTCCAT-AAAAA-GACAAAAGTCTCAGAAAAGAATATATGCTTTGAAATGCCCTG-CAAAAGTACCATAATGCAATGCTAGTGAAGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540640 265 - 14941987 CCATTTTCAATCTCTTTTGATTACAAATATATTAGAAAGGTCTATGTTCAAAGATGCAAAAAGTCTTCAAAGGCAACATTCAACTACAAAGAAGCACACAACGCATTCATAGAGGGTGGTTTCTTTAAGGGTTTTTCCAGTCTTGTCTGAGTTTCTGTAATATAAAACCAGTCTTTTAAAGTTTGTCCAT-AAAAA-GAC---AGTTTCAGAAAAGAATATATGCTTTGAAATGCCCTG-CAAAAGTATCATAATTCAATGCTAGTGAAAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11199709 239 - 20685099 ACACTTTGAATCTCTTTTGATTACAAATATATTAGCAAGGACCATGTTTAAAGATGCAAAAAGTCTTCAAAGACAAAATTCAACTTCAAAGAAGCAAA--ATGTATTCATAAAGGAGGACTTTTTAAAGAATTTTTCAAGTTTTATTTGAGTTTTTCTAATATAAAACCCAACATTTAAAGTTGGCCAATGAAAAA-GAC-AAGACCCCTGAAAAGAATAC-TGCTTCTAAATGCCCCA------------TAATG--------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112267761 263 - 122678785 ACACTTTCAATCTCTTTTGATTACAAATATATTAGCAAGGTCTATGTTCAAAGATGCAAAC-ATCTTCAAAGGCAAAATTTAGCTTCAAAGAAGCATACAATGCATACATAGAGAGT--CTTCTTTAAGGG-TTTTCAAGTCTTGGATGAGTTTC-ATAATATGAAATCAGTCTTTTAAAGTTAGTGAAT-AAAAAGGAC-AAAACCTTAGAAGAGAATGTGTTCTTTGAAATGCCCCA-GAGGGGTACCATAATGCAAAACTAGTAAAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 426990 262 - 2150887 AAACGTTCAACCTCTTTTGATTACAAATATATTAGGAAGGGCTATGTTCAAAGATGCAAAA-GTCTTCAAAGACAAAATTCAACTTCAAAGAAGCATACAAGGCATGCATAAAGGGTATCTTCTTTAAGGGCTTTTTAAGTCTGGGTTGAGTTTCT-TAGTATCAAA---GTCTTTTAAAGTGAGTGAAT-AAAAA-GGC-AAGGTCCTAGAAAAGAATATGTACTTTGAAATGCCCCA-CAGGGCTATCATAATGCAATACTAAAAAAGT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1207213 4791 - 1406956 I a score=4593691.000000 s hg38.chr18_GL383571v1_alt 11976 375 + 198278 ATAAAATAGAACTTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTGTTT--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACACCAGCAAGTTTCTACACTGCAAAACTTTGTCAGCAGTAGCCAATCAATGTACTTGAACATCCAAGAGACTTCAGCATATTCCCCAGAGTAAAAGAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAATTGCCATTAGCATATTAGTACAAT------GATAGATTAATTTCATT-TTCTATGGTTAAACATATCTAC-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT s panTro5.chr18 64962620 375 + 78221452 ATAAAACAGAACTTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTGTTT--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACATCAGCAAGTTTCTACACTGCAAAACTTTGTCAGCAGTAGCCAATCAATGTACTTGAACATCCAAGAGACTTCAGCATATTCCCCAGAGTAAAAGAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAATTTCCATTAGCATATTAGTACAAT------GATAGATTAATTTCATT-TTCTATGGTTAAACATATCCAC-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64084961 375 + 77229886 ATAAAACAGAACTTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTGTTT--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACATCAGCAAGTTTCTACACTGCAAAACTTTGTCAGCAGTAGCCAATCAATGTACTTGAACATCCAAGAGACTTCAGCATATTCCCCAGAGTAAAAGAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAATTTCCATTAGCATATTAGTACAAT------GATAGATTAATTTCATT-TTCTATGGTTAAACATATCCAC-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5305890 375 + 17472758 ATAAAACAGAACTTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGCGAAAAATTTCA-----GTAACATCATTTGTTT--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACACCAGCAAGTTTCTACACTGCAAAACTTTGTCAGCAGTAGCCAATCAATGTACTTGAACATCCAAGAGACTTCAGCATATTCCCCAGAGTAAAAGAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAATTGCCATTAGCATATTAGTACAAT------GATAGATTAATTTCATT-TTCTATGGTTAAACATATCCAC-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139344801 371 - 152096393 ATAAAACAGAACTTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAA-GATTTCAAAAGCTTTGGTGAAAAATTTCA-----GTAACATCATTTGTTT--TTTCTT-CCTTT---TAGTTTTTAAATGCCACAGCAGAAATAGCAAGGCTAC-TAACACCAGC-AGTTTCTACACTGCAAGACTTTGTCAGCAGTAGCCAATCAATGTACTTGAAAATCCAAGAGACTTCAGCATATGCCCCAGAATAAAAGAGCAAGCAGGGCCACATGTTTAT-------------AAATAAAAATTGC--TTAGCATATTAGTACAAT------GATAGATTAATTTCATT-TTCTATGGTTAAACATATCCAC-CTCTGCAATATTATATTTCTTTATCAATGGCATTTGTCTAAATATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299468 375 + 70235451 ATAAAACAGAACCTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATATCACAGCAGAAATAGCAAGGCTAT-TAACACCAGCAAGTTTCTATACTGCAAGACTTTGTCAGAAGTAGCCAATCAATGTACTTGAAAATCCAAGAGACTTCAGCATATGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAGTTGCCATTAGCATATTAGTACAAC------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-GTCTGCAATATTATATTTCCTTATCAATGGCATTCGTCTAAATATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62990882 375 - 75711847 ATAAAACAGAACCTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATATCACAGCAGAAATAGCAAGGCTAT-TAACACCAGCAAGTTTCTATACTGCAAGACTTTGTCAGAAGTAGCCAATCAATGTACTTGAAAATCCAAGAGACTTCAGCATATGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAGTTGCCATTAGCATATTAGTACAAC------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-GTCTGCAATATTATATTTCCTTATCAATGGCATTCGTCTAAATATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543585 375 - 18804593 ATAAAACAGAACCTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATATCACAGCAGAAATAGCAAGGCTAT-TAACACCAGCAAGTTTCTATACTGCAAGACTTTGTCAGAAGTAGCCAATCAATGTACTTGAAAATCCAAGAGACTTCAGCATATGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAGTTGCCATTAGCATATTAGTACAAT------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-GTCTGCAATATTATATTTCCTTATCAATGGCATTCGTCTAAATATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160376 375 + 18905526 ATAAAACAGAACCTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATATCACAGCAGAAATAGCAAGGCTAT-TAACACCAGCAAGTTTCTGTACTGCAAGACTTTGTCAGAAGTAGCCAATCAATGTACTTGAAAATCCAAGAGACTTCAGCATATGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAGTTGCCATTAGCATATTAGTACAAC------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990028 375 - 72318688 ACAAAACAGAACCTTCCTGAAAAACTTC-TTAAAT-AAA--------AAAATGATTTTAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAT-TGACACCAGCAAGTTTCTATACTGCAAGACTTTGTCAGAAGTAGCCAATCAAAGTACTCGAAAATCCAAGAGACTTCAGCATATGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAGTTGCCATTAGCGTATTAGTACAAC------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324068 375 - 1517660 ATAAAACAGAACCTTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAT-TAACACCAGCAAGTTTCTGTACTGCAAGACTTTGTCAGAAGTAGCCAATCAATGTACTTGAAAATCCAAGAGACTTCAGCATATGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------AAATAAAAGTTGCCATTAGCATATTAGTGCAAT------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-GTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3423859 370 + 6513552 ATAAAACAGAGCCTTCCTGCAAAACTTC-TTAAAT-ACA--------AAAATGATCTCAAAAACTTTGGTAAAAAACTTCA-----GTAACATCATTTATTC--TTTCTT-CCTTT---TAGTTTTTAAATACCACAGCAGAAATAGGAAGGCTAT-TAACACCAGCAAGTTTCTATACTGCAAGAC-----CAGAAGTAGCCAATAAATGTACTTGAAAATCCAAGAGACTTCAGCATGTGCCCCAGAGTGAAACAGCAAGCAGGGCCACGTGTTTAT-------------ACATAAAAGTTGCCATTAGCATATTAGTACAAC------GATAGATTAATTTCATT-TCCTATGGTTAAACATATCCAT-CTCTGCAATATTATATTTCCTTATCAATGGCATTTGTCTAAATATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204027 367 + 117903854 ATAAA--AAAATATTCCTGCAAAACTTC-TTAAAT--AA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTT--TTTCTT-ACTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACACCAGAAAGTTTCTATACTGCAAGGCTTTGTTAGCAGTAGCCAAT----GCACTGGGAAAGCCAAGAGACTTTAGCATATGCCCAGAAGTAAAAGAGCAAGCAGGGCCACATGTTTGT--------------AAAAAATCTTACCATTAGCATATTACTATAAT------GATAGATTAATTTCAAT-TTCTATGGTTAAACATATCCAT-CTCTACAATATTGTGTTTCCTTAGCAAGGGCATTTGTTTAAATACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395360 382 - 31320352 ATAAAACAGAATATTCCTGCAAAACTTC-TTAAATAAAA--------AAAATGATTTC---AACTTCCGTGAAAAATTTCA-----GTAACATCACTTATTT--TTTCTT-ACTTT---TAGTTTTTAAATACCACAGCAGAAACAGCAAGGCTAC-TAACACCAGAAAGTTTCTATGTTGCAAGACTTTGTTAGCAGTAGCCAAT----GCACTAGGAAATCCAAGAGACTTTAGCATATACCCAAAAGTAAAAGAGCAAGCAGGGCCACATGTTTATaaaaaaaaaaaaaaaaaaaaaaTCGGCATTAGCATATTACTACAAT------GATAAATTAATTTCAAT-TTCTATGGTTAAACACATCCAT-CTCTGCAATAttgtatttccttatcaaaggcatttgtctaaatatt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1584532 370 + 2203405 ATAAAACAGAATATTCCTGCAAAACTTC-TTAAAT-AAA--------AAAATGATTTCAAAAACTTTGGTGAAAAATTTCA-----GTAACATCATTTATTT--TTTCTT-ACTTT---TAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACACCAGAAAGTTTCTATGCTGCAAGACTTTGTTAGCAGTAGACAAT----GCACTTGGAAATCCAAGAGATTTTGGAATATGCCCAAAAGTAAAATAGCAAGCAGGGCCACATGTTTAT--------------AAAAAAATTTGGCATTAGCATATTACTACAAT------GATAGATTAATTTCAAT-TTCTATGGTTAAACATATCCAT-CTCTGCAATAttatatttccttatcaagggcatttgtctaaatatt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3540905 371 - 14941987 ATAAAACAGAATATTCCTGCAAAACTTA-TTAAAT-AAA--------AAAATAATTTTAAAAACTTTGGTGGAAAATTTCA-----GTAACATTATTTATTT--TTTCTT-ACTTT---AAGTTTTTAAATACCACAGCAGAAATAGCAAGGCTAC-TAACACTAGAAAGTTTCTATGCTGCAAGACTTTATTAGCAGTAGCCAAT----GCACTAGGAAATCCAAGAGACTTTAGCATATGCCCAAAAGTAAAAGAGCAAGCAGGGCCATGTTTATAT-------------AAAAAAAAATTGCCATTAGCATATTACTACAAT------GATAGATTAATTTCAAT-TTCTACGGTTAAACATATCCAT-CTGTGCAATATTGTATTTCCTTATCAAGGGCATTTGTCTAAATATT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1212004 372 - 1406956 ATAAAATAGGACATTCCTGTGAAACTTA-TTAAAT-AAA--------TAAATTATATCAAAAAATTTGTTGAAGA---TCA-----TGAACATCATTTGTTT--TTTCTT-CCTTT---TATATTTTAAATGCCACAGCAGAAATAACAAGGCCAC-TAACACCAGAAAGTCTGTATACTATAAGAC--TGTTAGTAGCAGCCCAT----GTACCAAAGAATCCCAGAGTTTTCAGCACGTGCTCCATAGTCCAAGAGCAATCAGGGCCACGTGTTTAT-------------AAATGAAAATTACCATCAGCATGTTATTCCAATTTTAAAGATAGATTAATTTCATC-TTTCATGGTTACACATATCCAT-CCCTGCAATATTTTATTTCCTTATCAAGGGCACTTGTCTCAATATT i proCoq1.NW_012148742v1 I 4791 I 153 s otoGar3.GL873546 11199948 372 - 20685099 --AAAGTAGGATATTTCTGCAACattta-ttacat-aaaataaattttgaaatatatcaaaaaaattGATGAAGA---TCAATGATTTAACATCATTTACTT-ACTTCTA-CCTTT---TACTTTTTGAAGTCCACAGAAGAAATAGCA------------ACCAAAACCTCAG--TACTGTAAGGCTTTGTTAGCGGCAGCCAAC----GTCCCAGAAAATCCCGGAG-TTTCAGCATATGCCCCATGGTACAAGAGCAATCAGGGCTACATGTTTGT-------------AAATGAAAATTGCCAGGAGCATATTTGCCCAATTTTGAAGACAAATTAATTTCGTT-TTTCACGGTTTTACAGATCCAT-CCCTGCAATATTTTACTTCCTTTTCAAGAGCACTTGTCTGAGTATT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112268024 364 - 122678785 ATAAAATAGGACATTCTCAGAAATTTTCATTAAAT-GCA--------AA----ACATTGAATGATTTGATGAAGG---TCA-----AGAACATCACttattt-ttttctt-tatttatgtattttttaaatttCTCAGCAGAAATAACAAGGCAAT-GAACCCCAGACAATTT-------------CCTTGTTAGTAGTAGCCAAG----GTACTGTCAAATCCAAGAGTTTTCAGCAAAAGCCCTATAGCATAAAAGCAAGTTATGCCACTTTTTTAG-------------AAGTGAAAATTTCCATTAGCATATTAGTCCAATTTTGAATATTCATTCATTTAATTATTCTACGATAAAACGTTTTCATCCCCTGCATTACTTCATTTCCTTATCAAAGGCACTTGTCTGAATGCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 427252 358 - 2150887 TTATAAAAGGACAGTCCTACAAAACTTA-TTAA---TAA--------AATATGATATTGAACAATTTGATGAAGG---TCA-----GTGACATCATTTCTTTATTTTCTTGCCTTC---TTTTTTTTTAAT----CAGCAGAAATAACACAGCAACAGAATTCCAGACAGTTGCTATACT-TAAGACTTTATTGGTAGGAGCCAAT----GTACTGGTAGGTCCAGGAGGTTTCAGCATATGCTCAGTTTCTTAAGAGCAACCTAGGCCAGAAATTTCT-------------AAGGGAAAATTGCCGTCATCATTTTAATCCAAG------TTTG--------TCATT-GCCCATGGTTAATTAAGCCCATTCCTTGCAACAATGCATTTCTTCATCAATGGCACTTGTATAAATCCC i dasNov3.JH575754 C 0 C 0 a score=1402993.000000 s hg38.chr18_GL383571v1_alt 12351 135 + 198278 GTACTAGTTATAGCCAAAGATAGAACAATGGC-TTAGGGTA-------TTGGGGAGCTTCTTTTCCAGTATCA--ATTGTTATTGGAATGTATAAAAATTGTGCATAATAATTGAAATAATTGTCACCACAAAACTGCA----CTAACA-- s panTro5.chr18 64962995 135 + 78221452 GTACTAGTTATAGCCAAAGATAGAACGATGGC-TTAGGGTA-------TTGGGGGGCTTCTTTTCCAGTATCG--ATTTTTATTGGAATGTATAAAAATTGTGCATAATAATTGAAATAATTGTCACCACAAAACTGCA----CGAACA-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085336 135 + 77229886 GTACTAGTTATAGCCAAAGATAGAACGATGGC-TTAGGGTA-------TTGGGGGGCTTCTTTTCCAGTATCG--ATTTTTATTGGAATGTATAAAAATTGTGCATAATAATTGAAATAATTGTCACCACAAAACTGCA----CGAACA-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306265 135 + 17472758 GTACTAGTTATAGCCGAAGATAGAACAATGGC-TTAGGGTA-------TTGGGGGGCTTCTTTTCCAGTATCA--ATTGTTATTGGAATGTATAAAAATTGTGCATAATAATTGAAATAATTGTCACCACAAAACTGCA----CTAACA-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345172 134 - 152096393 ATACTAGTTATAGCCAAAGATAGAATAATGGC-TTAGGGTA--------TGGGGAGCTTATTTTCCAGTATCA--ATTGTTATTAGAATGTATAAAAATTGCGCATAATAATTGAAATAATTGTCACCACAAAACTGCA----CAAACA-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299843 132 + 70235451 GTACTAGTTATAGCCAAAGATAGAACAATGGCTTTAGGGTA--------TGGGGAGCTTATTTTCAAGTATCA--ATTGTTATTGGAATGTATAAAAATTGCGC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTGACA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991257 132 - 75711847 GTACTAGTTATAGCCAAAGATAGAACAATGGCTTTAGGGTA--------TGGGGAGCTTATTTTCAAGTATCA--ATTGTTATTGGAATGTATAAAAATTGCGC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTGACA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13543960 132 - 18804593 GTACTAGTTATAGCCAAAGATAGAACAATGGCTTTAGGGTA--------TGGGGAGCTTATTTTCAAGTATCA--ATTGTTATTGGAATGTATAAAAATTGCGC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTGACA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160751 132 + 18905526 GTACTAGTTATAGCCAAAGATAGAACAATGGCTTTAGGGTA--------TGGGGAGCTTATTTTCAAGTATCA--ATTGTTATTGGAATGTATAAAAATTGCGC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTGACA-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990403 131 - 72318688 GTACTAGTTATAGCCAAAGATAGAACAATGGC-TTAGGGTA--------TGGGGAGCATATTTTCAAGTATCA--ATTGTTATTGGAATGTATAAAAATTGTGC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTAACA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324443 132 - 1517660 GTACTAGTTATAGCCAAAGATAGAACAATGGCTTTAGGGTA--------TGGGGAGCTTATTTTCAAATATCA--ATTTTTATTGGAATGTATAAAAATTGCGC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTGACA-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424229 131 + 6513552 GTACTAGTTATAGCCAAAGATAGAACAATGGC-TTAGGGTA--------TGGGGAGCTTATTTTCAAGTATCA--ATTGTTACTGGAATGTATAAAAATTGCAC---ATAATTGAAATAATTGTCACCACAAAACTGCA----CTAACA-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204394 138 + 117903854 GTACTACGTAGAGCCAAAGATGGAACAAAGGC-TTAGGGTA--------TGAGGAGCTTATTTGCAAGCGTCA--ATTGTTACTGGAATGTATAAAAATTGGGCACAATAATTGAAATAATTGTCACCACAAAACTGCACTCTCTAACA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395742 135 - 31320352 gtactaggtatggccaaagatagaAAAATGGC-TTAGGGTA--------TGGGGAGCTTATTTTCAAGTATTA--ATTGTTACTGGAATGTATAAAAATCGGGTATAATAATTGAAATAATTGTCA-CACAAAACTGTA--CTCTAGCA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1584902 138 + 2203405 gtactaggtatagccaaagatagagcAATGGC-TTAGGGTA--------TGGGGAGCTTATTTTCAAGAATCA--ATTGTTACTGGAATGTGTAAAAATTGGGCATAATAATTGAAATAATTGTCACCACAAAACTGTACTCTCTAACA-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541276 138 - 14941987 GTACTAGGTATAGCCAAAGATAGAACAATGGC-TTAGGGTA--------TGGGGAGCTTATTTTCAAGTATCA--ATTGTTACTGGAATGTATAAAAATTGGGCATAATAATTGAAATAATTGTCACCACAAAACTGTACTCTCTAACA-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11200320 131 - 20685099 GCAATCATTATACCCAGAGGTAGAGCTTTGGGCTTAGGGGA--------TGG-----TTATTTTCAAGTGTGA--ATTGTTATTGGAATATTTAAAAATTGAGTGTAATAATTTACATGCTTAT---TATAAAATGACATTCTTTTATG-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112268388 138 - 122678785 ACCTTCTTTATGACCAAAGATAGATCAATGGATTTGGGCTA-------GTGGGGAG-TTATTTTTAAGTGTCA--ATTGCTGCTGGAATCTATAAAAATTTGGCAC-AAAACTCATACAATGACCTTCATAAAACTGCATCCTCTAATG-- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 427610 136 - 2150887 ACACTTATTATGGCCAG-----------TGGG-TTTGTGCACAGTGGGCAGGGGTGCATATTTTCAAGTCTCAGGATTGCTATAGGAATGTACAAAAATGAGGCATACTAGTTCAAA-AATAATCATCATAAACCCACA--CCCTAAAATG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212376 153 - 1406956 I a score=308213.000000 s hg38.chr18_GL383571v1_alt 12486 24 + 198278 TACAATACAGAAA--ATGGAGGAGAG s panTro5.chr18 64963130 24 + 78221452 TACAATACAGAAA--ATGGAGGAGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085471 24 + 77229886 TACAATACAGAAA--ATGGAGGAGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306400 24 + 17472758 TACAATACAGAAA--ATGGAGGAGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345306 24 - 152096393 TACAATACAGAAA--ACGGAGGAGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299975 24 + 70235451 TACAACACAGAAC--ATGGAAGAGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991389 24 - 75711847 TACAACACAGAAC--ATGGAAGAGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544092 24 - 18804593 TACAACACAGAAC--ATGGAAGATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160883 24 + 18905526 TACAACACAGAAA--ATTGAAGAGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990534 24 - 72318688 TACAACACAGAAA--ATGGAAGACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324575 24 - 1517660 TACAACACAGAAA--ATGGAAGAGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424360 24 + 6513552 TACAACACAGAAA--ATGGAAGAGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204532 24 + 117903854 TACAATACAGAAA--ATGGGGGATAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395877 24 - 31320352 TACAATACAGAAA--ATGGGGGAGAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585040 24 + 2203405 TACAATACAGAAA--ATGGGGACGAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541414 24 - 14941987 TACAATACAGAAA--ATGAGGGAGAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1212529 24 - 1406956 TACAATACAGAAA--ATGGAGGAGAG i proCoq1.NW_012148742v1 I 153 I 78 s otoGar3.GL873546 11200451 24 - 20685099 TAAAATACAGAAA--ATGGAGCAGAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112268526 24 - 122678785 TATGGTACAGAAA--ATGAAGGCAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 427746 24 - 2150887 TTCAGTACAGAAAACATGGAGGAA-- i dasNov3.JH575754 C 0 C 0 a score=981623.000000 s hg38.chr18_GL383571v1_alt 12510 85 + 198278 TACATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCAAGGACATCCTTGATTTGCTCATAATACACTCATTCCTTTC s panTro5.chr18 64963154 85 + 78221452 TACATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCAAGGACATCCTTGATTTGCTCATAATACACTCATTCCTTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085495 85 + 77229886 TACATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCAAGGACATCCTTGATTTGCTCATAATACACTCATTCCTTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306424 85 + 17472758 TACATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCAAGGACATCCTTGATTTGCTCATAATACACTCATTCCTTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345330 85 - 152096393 TACATTTGTGAATATTCCCATGAAAATGTACAAAAGTCTTTAGCAACGACATCCTTGATTTGCTCATAATACACTCATTCCTTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57299999 85 + 70235451 TAAGTTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCGAGGACATCCTTGATTTGCTCACAATACACTCATTCCTTCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991413 85 - 75711847 TAAATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCGAGGACATCCTTGATTTGCTCACAATACACTCATTCCTTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544116 85 - 18804593 TAAATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCGAGGACATCCTTGATTTGCTCACAATACACTCATTCCTTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160907 85 + 18905526 TAAATCTGTGAACATTCCCATGCAAATATACAAAAGTGGTTAGCGAGGACATCCTTGATTTGCTCACAATACACTCATTCCTTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990558 85 - 72318688 TAAATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCGAGGACATCCTTGATTTGCTCACAATACACTCATTCCTTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324599 85 - 1517660 TAAATTTGTGAACATTCCCATGCAAATGTACGAAAGTGGTTAGCGAGGACATCCTTGATTTGCTCACAATACACTCATTCCTTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424384 85 + 6513552 TAAATTTGTGAACATTCCCATGCAAATGTACAAAAGTGGTTAGCGAGGACATCCGTGATTTGCTCACAATACACTCATTCCTTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204556 85 + 117903854 TAAATTTTTTAACATTCCCATGCAAATGTACAAAAGTGGTTAGCAAGGACATCCTCGATTTGCTTGTAATGCACTCATTCCTTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395901 85 - 31320352 TAAATTTTTTAACATTCCCATGCAAATGTACAAAAGTGGTTAGTGAGGACATCCTCGATTTGTTCATAATACACTCATTCCTTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585064 85 + 2203405 TAAATTTTTTCACATTCCCATGCAAATGTACAAAAGTGGTTAGTGAGGACATCCTTGATTTGCTCATAATACACTCATTCCTTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541438 85 - 14941987 TAAATTTTTTAACATTCCCATGCAAATGTACAAAAGTTGTTAGCAAGGACATCCTTGATTGGCTCATAATACACTCATTCCTTTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11200475 85 - 20685099 TTGATTTTTAAACATGCCCGCGGGAATGTGTAGGAGGAGCTAGACACTACATCACTGATGTGCTGGTGACAAGCTCTGCGCCTCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112268550 85 - 122678785 CTCATTTCCAAACATGCCTATGCCAACGGGTAAAAGTGGTTAGAGAAGACCTAGCTGACTTGCTCATGACATGCTCATCGTCAGC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 427770 82 - 2150887 CTCGCTTGTGAACCTGCCCATGCTGGTGAGC---AGTGGCTGGAGAGAAAAGCGCTGGCCTGCTCTTGATGTGCACATCCCCTTC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212553 78 - 1406956 I a score=17290.000000 s hg38.chr18_GL383571v1_alt 12595 1 + 198278 A s panTro5.chr18 64963239 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085580 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306509 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345415 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300084 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991498 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544201 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160992 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990643 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324684 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424469 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204641 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395986 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585149 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541523 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1212631 1 - 1406956 A i proCoq1.NW_012148742v1 I 78 C 0 s otoGar3.GL873546 11200560 1 - 20685099 A i otoGar3.GL873546 C 0 I 1135 s canFam3.chr1 112268635 1 - 122678785 A i canFam3.chr1 C 0 I 5 s dasNov3.JH575754 427852 1 - 2150887 A i dasNov3.JH575754 C 0 I 5 a score=701172.000000 s hg38.chr18_GL383571v1_alt 12596 59 + 198278 CCA----TTGAGTGTGCACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAGGTTTTACTTTT s panTro5.chr18 64963240 59 + 78221452 CCA----TTGAGTGTGCACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAGGTTTTACTTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085581 59 + 77229886 CCA----TTGAGTGTGCACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAGGTTTTACTTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306510 59 + 17472758 CCA----TTGAGTGTGCACGTATTTCTCTGATTGGAAAGA---ACTACAGAGGAGGTTTTACTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345416 58 - 152096393 CCA----TTGAATATGTACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAGGTTTTA-TTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300085 63 + 70235451 CCAGCCGTTGAGTTTGTACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAAGTTTTACTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991499 63 - 75711847 CCAGCCGTTGAGTTTGTACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAAGTTTTACTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544202 63 - 18804593 CCAGCCGTTGAGTTTGTACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAAGTTTTACTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13160993 63 + 18905526 CCAGCCGTTGAGTTTGTACCTATTTCTCTGATTGGAAAGA---ACTACAGAGGAAGTTTTACTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990644 63 - 72318688 CCAACCGTTGAGTTTGTACATATTTCTCTGATTGGAAGGA---ACTACAGAGGAAGTTTTACTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324685 63 - 1517660 CCAGCCGTTGAGTTTGTACCTATTTCTCTGATTGGAAAGA---ACTACAGAGGAAGTTTTACTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424470 63 + 6513552 CCAACCGTTGAGTTTGTACATATTTCTCTGATTGGAAAGA---ACTACAGAGGAAGTTTTACTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204642 62 + 117903854 CCAACC-ATGAGTGTGTACATATTTCTCTGACTGGAAAGA---ACTAGGAAGGAAGTTTTACTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19395987 62 - 31320352 CCAACC-ATGAGTATGTACATATTTCTCTGATTGGAAAGA---ACTAGGAAGGAGGTTTTACTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585150 62 + 2203405 CCAACC-ATGAGTATGTACATATTTCTCTGATTGGAAAGA---ACTAGGAAGAAGGTTTTACTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541524 62 - 14941987 CCAACC-ATGAGTATGTACATATTTCTCTGATTGGAAAGA---ACTAGGAAGGTAGTGTTACTTTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1212632 59 - 1406956 CCA----TTGAGTGTGTACAGATTTCTCTTGTTGGAGAGA---ACTAGAAAGGAGGTTTCACTTTT i proCoq1.NW_012148742v1 C 0 I 1527 s otoGar3.GL873546 11201696 55 - 20685099 CCA----CCCAGTGTGTGCAGACTCATCTGGTTGGAGCGACTCACAAGAAAGGAGATTT------- i otoGar3.GL873546 I 1135 C 0 s canFam3.chr1 112268641 59 - 122678785 ACA----TGGAGGACACATGTACTTTTCTGATTGGAGAGA---GCTAGGGAAGAGGTTTCACTTTT i canFam3.chr1 I 5 C 0 s dasNov3.JH575754 427858 59 - 2150887 CCA----CTGAGAGGACAGCTAGTCCTCTGCCTGGGGAGA---AGTAGGGAGGCGGTTCCACTTTT i dasNov3.JH575754 I 5 C 0 a score=1862736.000000 s hg38.chr18_GL383571v1_alt 12655 203 + 198278 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAACAGAGAGAAATCAAGCAACTC-AAAACAACCTT----------acacacacaca------cacaca----cacactcacaAAGATATTTTGTTCACCATATGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTCACATTGCTC s panTro5.chr18 64963299 207 + 78221452 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAACAGAGAGAAATCAAGCAACTC-AAAACAACCTT----------acacacacaca------cacacacacgcacactcacaAAGATATTTTGTTCACCATATGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGAGCTAC--ATTAAAAGAACAGTCACATTGCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085640 205 + 77229886 TACTTTCCAGTTTGCTATTGAAGAGAG---------------AAAACTAAC--AGAGAAATCAAGCAACTC-AAAACAACCTT----------acacacacaca------cacacacacgcacactcacaAAGATATTTTGTTCACCATATGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGAGCTAC--ATTAAAAGAACAGTCACATTGCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306569 216 + 17472758 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAACAGAGAGAAATCAAGCAACTC-AAAACAACCTTacacgcatgcacacacacaca------cgcacacacacacactcacaAAGATATTTTGTTCACCATATGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTC-CATTGCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345474 222 - 152096393 TACTTTCCAGTTTGCTATTAAAGAGAGAAAAACTAACAGAGAAAAATCAACAGAGAAAAATCAAGCAACTC-AAAACAACCTT----------acacacacaca------cacacacacatacactcacaAAGATATTTTGTTCACCATATGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTTATATTGTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300148 197 + 70235451 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAAC----AGAAATCAAGCAACTC-AAAACAACcat----------------acaca------cacactcacacacacTCCCAAAGATATTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGGCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTTGTATTGTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991562 197 - 75711847 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAAC----AGAAATCAAGCAACTC-AAAACAACcat----------------acaca------cacactcacacacactcacaAAGATATTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTTGTATTGTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544265 197 - 18804593 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAAC----AGAAATCAAGCAACTC-AAAACAACcat----------------acaca------cacactcacacacactcacaAAGATATTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTTGTATTGTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161056 197 + 18905526 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAGACTAAC----AGAAATCAAGCAACTC-AAAACAACcat----------------acaca------cacactcacacacactcacaAAGATACTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTTGTATTGTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990707 209 - 72318688 TACTTTCCAGTTTGGTATTAAAGAGAG---------------AAAACTAAC----AGAAATCAAGCAACTC-AAAACAACCATacacac----acacacacaca------cacacacacacacactcacaAAGATATTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTAACATCTGGGCTAC--ATTAAATGAACAATTGTATTGTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324748 187 - 1517660 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAAC----AGAAATTAAGCAACTC-AAAACAACCAT--------------------------------ACACACACACTCACAAAGATACTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATTTGGGCTAC--ATTAAAAGAACAGTTGTATTGTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424533 203 + 6513552 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACTAAC----AGAAATCAAGCAACTC-AAAATAACCGT----------acacacacaca------ctcacacacacacactcaTAAAGATATTTTGTTCATCATGTGTATTGATGTGCCTGTTTTCAGTCAATCCACAGGAAGGGCTAAGGAGA--------GTGACATCTGGGCTAC--ATTAAAAGAACAGTTGTATTGTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204704 219 + 117903854 TACTTTTCAGTTTGCTATTAAAGAGAG---------------AAAACAAACAGAGAGAAAACAAGCAACTC-AAAACAACCTT--acacacatgcacacacacatgca--cacacacatacacacacacaAAAATGTTTTGTTCACCATGTATATTGAAGAGCCTGTTTTCTGTCAATCCACAGGAAGGGCAAATCAGA--------GTGACATCTGGGCTAC--ATTAAAGGAATAGTTGTATTGTCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396049 217 - 31320352 TACTTTCCAGTTTGCTATTAAAGAGCG---------------A----AAACAGAGAGAAAACAAGCAACTC-AAAACAACCTT--GcacacatgcatacacacacacatgcacacacacacacacacacacaAATATTTTTTTCACTATGTAAATTGAAGAGCCTGTTTTCAGTCAATCCACAGGAACAGCGAATCAGA--------GTGACATCTGGGCTAC--ATTAAAGGAACAGTTGTATTGTCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585212 200 + 2203405 TACTTTCCAGTTTGCTATTAAAGAGAG---------------AAAACAAACAGAGAGAAAACAAGCAGCTC-AAAACAACCTT--acacacatgcatacacaca------catgcacacacacatacacaAAAATATTTTGTTCACCA---------------ACGTTTTCAGTCAATCCACAGGAAGAGCGAATCAGA--------GTGACATCTGGGCTAC--ATTAAAGAAACAGTTGCATTGTCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541586 204 - 14941987 TACTTTCCAATTTGCTATTAAAGAGAG---------------AAAATGAACAGAGAGAAAACAAGCAACTC-AAAACAACCTT--acacacatgcacaaacaca------cacaca-----------AAAAAAATATTTTGTTCACCATGTATATTGAAGAGCCTGTTTTCAGTCAATCCACGGGAAGAGCGAATCAGA--------GTGACATCTGGGCTAC--ATTAAAGGAACAGTTGCATTGTCC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11201751 158 - 20685099 CACTTTTCAGTTTGCTACTAAAATGCA---------------AAAACAACC-----------------CTCTAAAACAATGAA------------------ATA-----------------------------GTATTTTGTTCACTGGGTGTATTCCAGTGTCTATGCCTGGTCAATCCGCATGAAGA--TGAAGAGG--------ATGAGATGTGATTTAT--GTTAAAGGAACAACCGTATTGTAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112268700 174 - 122678785 --------AATTTGTCCTTCGATAAAG---------------AACA-------------------CAATTC-AAAACTCCCCA-------------CACCTAAT------GATCTATGTATATATCTGTATATACATATAGTTCCTTTTGTGTATT-CTGGGCCTGATTTTA-TCACTAT-TAGGAAGAGCTAAGGGAA--------ATAATATTTGAGCTAC--ATTAAAGGAACAATCATATTGTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 427917 165 - 2150887 -------CAGTTCA-TCCTAAAGAGAG---------------AAAACAACC------AAATCA---------AAAACATTCTT-------------------CT------CCATCACACAAATGCTC----------TTTACTCACTGCATGTATGA-----------CTTGATCCAACCAAAAGGAGGGCTAAGTGGGGAGAAGGCGTGAGACCTGAGCTATAGAGTAAAGGAAAATCTGCATTGTCC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I a score=64772.000000 s hg38.chr18_GL383571v1_alt 12858 9 + 198278 AAAGAACTC s panTro5.chr18 64963506 9 + 78221452 AAAGAACTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085845 9 + 77229886 AAAGAACTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306785 9 + 17472758 AAAGAACTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345696 9 - 152096393 AAAGAACTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300345 9 + 70235451 AAAGAACTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991759 9 - 75711847 AAAGAACTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544462 9 - 18804593 AAAGAACTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161253 9 + 18905526 GAAGAACTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990916 9 - 72318688 AAAGAACTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324935 9 - 1517660 AAAGAACTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424736 9 + 6513552 AAAGAACTC i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11201909 9 - 20685099 AAAGGATTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112268874 9 - 122678785 AAAGGGCTC i canFam3.chr1 C 0 I 5 s dasNov3.JH575754 428082 3 - 2150887 AAA------ i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e calJac3.chr13 105204923 0 + 117903854 C e aotNan1.NW_018502140v1 3541790 0 - 14941987 C e cebCap1.NW_016107689v1 1585412 0 + 2203405 C e saiBol1.JH378121 19396266 0 - 31320352 C a score=14196.000000 s hg38.chr18_GL383571v1_alt 12867 2 + 198278 AA s panTro5.chr18 64963515 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085854 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306794 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345705 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300354 2 + 70235451 AA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991768 2 - 75711847 AA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544471 2 - 18804593 AA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161262 2 + 18905526 AA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990925 2 - 72318688 AA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324944 2 - 1517660 AA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424745 2 + 6513552 AA i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11201918 2 - 20685099 AA i otoGar3.GL873546 C 0 I 4 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e calJac3.chr13 105204923 0 + 117903854 C e dasNov3.JH575754 428085 0 - 2150887 C e canFam3.chr1 112268883 5 - 122678785 I e aotNan1.NW_018502140v1 3541790 0 - 14941987 C e cebCap1.NW_016107689v1 1585412 0 + 2203405 C e saiBol1.JH378121 19396266 0 - 31320352 C a score=652557.000000 s hg38.chr18_GL383571v1_alt 12869 126 + 198278 GTTTAGCccgagtacagtagctcatgcctgtaatcccagccctttgggaggccgaggtgggtggatcatgaggtcaggagttcgagacaagtatgactaatatggtgaaatctcgtctttactaaa s panTro5.chr18 64963517 126 + 78221452 GTTTAGCccgagtacagtggctcatgcctgtaatcccagcactttgggaggctgaggtgggtggatcatgaggtcaggagttcgagacaagtatgactaatatggtgaaatctcgtctttactaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085856 126 + 77229886 GTTTAGCccgagtacagtggctcatgcctgtaatcccagcactttgggaggctgaggtgggtggatcatgaggtcaggagttcgagacaagtatgactaatatggtgaaatctcgtctttactaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306796 125 + 17472758 GTTTAGCccgagtacagtggctcatgccggtaat-ccagcacttcgggaggccgaggtgggtggatcatgaggtcaggagttcgagacaagtatgactaatatggtgaaatctcgtctttactaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345707 126 - 152096393 GTTTAGCccgagtacagtggctcatgcctgtaatcccaggactttgggaggccaaggtgggtggatcatgaggtcaggagttcaagacaagtatgaccaacatggtgaaatctcgtcgttactaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300356 126 + 70235451 GTTTAggctgagtacagtggctcacgcctgtaatcctagcactttgggaggacaaggtgggtggatcatgaggtcaggagtttgagacaagcacgagcaatatggtgaaacctcgtctccactaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991770 126 - 75711847 GTTTAggctgagtacagtggctcacgcctgtaatcctagcactttgggaggacaaggtgggtggatcatgaggtcaggagtttgagacaagcacgagcaatatggtgaaacctcgtctccactaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544473 126 - 18804593 GTTTAggctgagtacagtggctcacgcctgtaatcctagcactttgggaggacaaggtgggtggatcatgaggtcaggagtttgagacaagcacgagcaatatggtgaaacctcgtctccactaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161264 126 + 18905526 GTTTAggctgagtacagtggctcacacctgtaatcctagcactttgggaggacaaggtgggtggatcatgaggtcaggagtttgagacaagcatgagcaatatggtgaaacctcgtctccactaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59990927 126 - 72318688 GTTTAggctgagtacagtggctcacgcctgtaatcctagcactttgggaggacaaggtgggtggttcatgaggtcaggagtttgagacaagcacgaccaatatggtgaaaccttgtctccactaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 324946 126 - 1517660 GTTTAggctgagtacagtggctcacgcctgtaatcctagcactttgggaggacaaggtgggtggatcatgaggtcaggagtttgagacaagcatgagcaatatgatgaaacctcgtctccactaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424747 126 + 6513552 GTTTAggctgagtacagtggctcatgcctgtaatcctggcactttgggaggacaaggtgggtggatcatgaggtcaggagtttgagacaagcacgaccaatatggtgaaacctcatctccactcaa i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 428085 16 - 2150887 -----------------------------------------------GGGGC---------------------------------------------------------------TCTTAACCAAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e calJac3.chr13 105204923 0 + 117903854 C e canFam3.chr1 112268883 5 - 122678785 I e otoGar3.GL873546 11201920 4 - 20685099 I e aotNan1.NW_018502140v1 3541790 0 - 14941987 C e cebCap1.NW_016107689v1 1585412 0 + 2203405 C e saiBol1.JH378121 19396266 0 - 31320352 C a score=828233.000000 s hg38.chr18_GL383571v1_alt 12995 148 + 198278 aatacaaaaattagccgggtgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaaccagggtggtggaaggttgcagtgatccgagatcttttacaccactgcactccagcctgggcgacag s panTro5.chr18 64963643 148 + 78221452 aatacaaaaattagcgaggtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaaccagggtggtggaaggttgcagtgatccgagatcttttacaccactgcactccagcctgggcgacag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64085982 148 + 77229886 aatacaaaaattagcgaggtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaaccagggtggtggaaggttgcagtgatccgagatcttttacaccactgcactccagcctgggcgacag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5306921 147 + 17472758 aatacaaaaattagccgggtgtggtggtg-gcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaaccagggtggtggaaggttgcagtgatccgagatcttttacatcactgcactccagcctgggcgacag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345833 146 - 152096393 aatacgaaaattagccgggtgtggcggtgtgcacctgtaatcccggctactcaggaggctgaggcaggagaatcacttgaaccagggtggtggaaggttgcagtgatccaagatcttttacaccactgcactccagcctgggcgac-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300482 148 + 70235451 aatacaagaattagctgggtgtggtggtgcgcacctataatcccagctactcagcaggctgagacaggaaaatcacttgaaccagggtagtggaaggttgcagtgagccgggatctttcacaccactgcactccagcctgggcaacag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62991896 148 - 75711847 aatacaagaattagctgggtgtggtggtgcgcacctataatcccagctactcagcaggctgagacaggaaaatcacttgaaccagggtagtggaaggttgcagtgagccgggatctttcacaccactgcactccagcctggtcaacag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544599 148 - 18804593 aatacaagaagtagctgggtgtggtggtgcgcacctgtaatcccagctactcagcaggctgagacaggaaaatcacttgaaccagagtagtggaaggttgcagtgagccgggatctttcacaccactgcactccagcctgggcaacag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161390 148 + 18905526 aatacaagaattagctgggtgtggtggtatgcacctgtaatcccagctactcagcaggctgagacaggaaaatcacttgaaccagggtagtggaaggttgcagtgagccgggatctttcacaccactgcactccagcctaggcaacag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991053 148 - 72318688 aatacaagaattagctgggtgtggtggtgcgcacctgtaatcccagctactcagcaggctgagacaggaaaatcacttgaaccagggtggtggaaggttgcactgagccgggatctttcacaccactgcactccagcctgggcaacag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325072 148 - 1517660 aatacaagaattagctgggtgtgctggtacgcacctgtaatcccagctactcagcaggctgagacaggaaaatcacttgaaccagggtagtggaaggttgcagtgagccgggatcttcaacaccactgcactccagcctgggcaacag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3424873 148 + 6513552 aatacaagaattagctgggtgtggtggtgcgcacctgtaatcccagctactcagcaggctgagacaggaaaaccacttgaaccagggtggtggaaggttgcagtgagctgggatctttcataccactgccctccagcctgggcaacag i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e calJac3.chr13 105204923 0 + 117903854 C e dasNov3.JH575754 428101 0 - 2150887 C e canFam3.chr1 112268883 5 - 122678785 I e otoGar3.GL873546 11201920 4 - 20685099 I e aotNan1.NW_018502140v1 3541790 0 - 14941987 C e cebCap1.NW_016107689v1 1585412 0 + 2203405 C e saiBol1.JH378121 19396266 0 - 31320352 C a score=78805.000000 s hg38.chr18_GL383571v1_alt 13143 38 + 198278 agtaagactccatctcaaaaaaaataaa-aagtaaaaat s panTro5.chr18 64963791 39 + 78221452 agtaagactccatctcaaaataaataaataaataaaaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086130 39 + 77229886 agtaagactccatctcaaaataaataaataaataaaaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307068 39 + 17472758 agtaagactccatctcaaaaaaaataaataaataaaaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139345979 35 - 152096393 ----agacttcatctcaaaaaaaaaaaaaaaaagaaaag i nomLeu3.chr4 C 0 I 3 s rheMac8.chr18 57300630 27 + 70235451 agtaaaactccgtctc------------aaaaaaaaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992044 27 - 75711847 agtaaaactccgtctc------------aaaaaaaaaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544747 30 - 18804593 agtaaaactccgtctc---------aaaaaaaaaaaaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161538 25 + 18905526 agtaaaactccgtctc--------------aaataaaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991201 29 - 72318688 agtaaaactccatctc----------aaaaaaaaaaaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325220 25 - 1517660 agtaaaactccgtctc--------------aaataaaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425021 22 + 6513552 agtaaaactccgtctc-----------------aaaaaa i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 428101 13 - 2150887 TGTAGGGCTTCAT-------------------------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e calJac3.chr13 105204923 0 + 117903854 C e canFam3.chr1 112268883 5 - 122678785 I e otoGar3.GL873546 11201920 4 - 20685099 I e aotNan1.NW_018502140v1 3541790 0 - 14941987 C e cebCap1.NW_016107689v1 1585412 0 + 2203405 C e saiBol1.JH378121 19396266 0 - 31320352 C a score=80935.000000 s hg38.chr18_GL383571v1_alt 13181 8 + 198278 aaagaaCT s panTro5.chr18 64963830 8 + 78221452 aaagaaCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086169 8 + 77229886 aaagaaCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307107 8 + 17472758 aaagaaCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346017 8 - 152096393 aaaGAACT i nomLeu3.chr4 I 3 C 0 s rheMac8.chr18 57300657 8 + 70235451 aaagaaCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992071 8 - 75711847 aaagaaCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544777 8 - 18804593 aaagaaCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161563 8 + 18905526 aaagaaCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991230 8 - 72318688 aaagaaCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325245 8 - 1517660 aaagaaCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425043 8 + 6513552 aaagaaCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204923 8 + 117903854 AAAGAACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396266 8 - 31320352 AAAGAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585412 8 + 2203405 AAAGAACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541790 8 - 14941987 AAAGAACT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e dasNov3.JH575754 428114 0 - 2150887 C e canFam3.chr1 112268883 5 - 122678785 I e otoGar3.GL873546 11201920 4 - 20685099 I a score=38352.000000 s hg38.chr18_GL383571v1_alt 13189 3 + 198278 CAA s panTro5.chr18 64963838 3 + 78221452 CAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086177 3 + 77229886 CAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307115 3 + 17472758 CAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346025 3 - 152096393 CAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300665 3 + 70235451 CAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992079 3 - 75711847 CAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544785 3 - 18804593 CAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161571 3 + 18905526 CAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991238 3 - 72318688 CAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325253 3 - 1517660 CAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425051 3 + 6513552 CAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204931 3 + 117903854 CAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396274 3 - 31320352 CAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585420 3 + 2203405 CAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541798 3 - 14941987 CAA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112268888 3 - 122678785 CAA i canFam3.chr1 I 5 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e dasNov3.JH575754 428114 0 - 2150887 C e otoGar3.GL873546 11201920 4 - 20685099 I a score=1218580.000000 s hg38.chr18_GL383571v1_alt 13192 110 + 198278 GTTTAAGTTTTAATTTGTGCTAAAATCTTCCAAGGAGTC-TAAG--TCTGAGAGCCAAAAGGATATAACTGCAGAATAAACCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT s panTro5.chr18 64963841 110 + 78221452 GTTTAAGTTTTAATTTGTGCTAAAATCTCCCAAGGAGTC-TAAG--TCTGAGAGCCAAAAGGATATAACTGCAGAATAAACCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086180 110 + 77229886 GTTTAAGTTTTAATTTGTGCTAAAATCTCCCAAGGAGTC-TAAG--TCTGAGAGCCAAAAGGATATAACTGCAGAATAAACCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307118 110 + 17472758 GTTTAAGTTGTAATTTGTGCTAAAATCTCCCAAGGAGTC-TAAG--TCTGAGAGCCAAAAGGATATAACTGCAGAATAAACCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346028 110 - 152096393 GTTTAAGTTTTAATTTGTGCTAAAATCTCCCAAGGAGTC-TAAG--TCTGAGAGCTGAAAGGATATAACTGCAAAATAAACCTCTGCT-CCCGCAGACATGCTTGTCTCTAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300668 111 + 70235451 GTTTAACTTTTAATTTGTGCTAAAATAACCCAAGGAGTCTTAAG--TCCGAAAGCCAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTATCTCTAGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992082 111 - 75711847 GTTTAACTTTTAATTTGTGCTAAAATAACCCAAGGAGTCTTAAG--TCCAAAAGCCAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTATCTCTAGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544788 110 - 18804593 GTTTAACTTTTAATTTGTGCTAAAATAACCCAAGGAGTC-TAAG--TCCAAAAGCCAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTATCTCTAGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161574 110 + 18905526 GTTTAACTTTTAATTTGTGTCAAAATAACCCAAGGAGTC-TAAG--TCCAAAAGCTAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991241 110 - 72318688 GTTTAAGTTTTAATTTGTACTAAAATAACCCGAGGAGTC-TAAG--TCCAAAAGCCAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325256 110 - 1517660 GTTTAACTTTTAATTTGTGTTAAAATAACCCAAGGAGTC-TAAG--TCCAAAAGCCAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425054 110 + 6513552 GTTTAAGTTTTAATTTGTGCTAAAATAACCCAAGGAGTC-TAAA--TCCAAAAGCCAAAAGGATGTAACTGCAGAATAAATCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105204934 112 + 117903854 GTTTAAGTTGTAATTTGTGTTAAAATCTCCCAGGGAGTC-TAAATCTCTGAAAGCCAAAAGGATCTAACCACAGGGTAAACCTCTGCT-CCCACAGACATTCTTGTCTCTAGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396277 112 - 31320352 GTTTAAGTTGTAATTTGTGTTAAAATCTCCCAAGGAGTC-TAAGTCTCCGAAAGCCAAAAGGATCTAACCGCAGGGTAAACCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585423 112 + 2203405 GTTTAAGTTGTAATTTGTGTTAAAATCTCCCAAGGAGTC-TAAATCTCTGAAAGCCAAAAGGATCTAACCGCAGGGTAAACCTCTGCT-CCCACAGACATGCTTGTCTCTAGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541801 111 - 14941987 GTTTAAGTTGTAATTTGTGTTAAAATCTCCCAAGGAGTC-TAAATATCTGAAAGCCAAAAGGATCTAACCGCAGAATAAACCTCTGCT-CCCACAGACATGCTTGTCTC-AGAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11201924 113 - 20685099 GGTTGAGTTTTACTATGTGTTAAAATTTCCTGATGAGTC-TAAGCCTCTGAAAGCCAAAAGCATATAACTGTAAGAAAAAACTCTTCCACCAATCCACGCACCTGTCCTTAGAC i otoGar3.GL873546 I 4 C 0 s canFam3.chr1 112268891 93 - 122678785 GTTGAAGT--CAATTTGTGGT-AAATTTCCGAAGAAGTC-----------------AAAAGAATATAACTGCATGAGAAGCCTCTGTC-CCCATAGACTTACTTATTCCTATAT i canFam3.chr1 C 0 I 1216 s dasNov3.JH575754 428114 94 - 2150887 --------------TTTTAGTAAAATATCCTGAGAAGTC-TCAGCCTCTGAAAGCC-AAGGCATGTACCTG-AGGAGAAAC--CTGCT-CCCGCAGAAATGCTTGCGCTGAGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I a score=2557550.000000 s hg38.chr18_GL383571v1_alt 13302 246 + 198278 CAGTATGAGACA--C--CAGGCCTGACTTCTCCAATA--TCTCTGTCTCAGCTGTTATCTAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAGTTTGTCCTCAT-ATCCACAATACATTCTCTTGCATTTAACC--TAGCATTCTCAGATTCAGTAACTCCT----TTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTCAAAGA s panTro5.chr18 64963951 246 + 78221452 CAGTATGAGACA--C--CAGGCCTGACTTCTCCAATA--TCTCTGTCTCAGCTGTTATCTAAATATCTTATCCA---GTGGCTCTTCCAGAGTCTCCACCAGCTTGTCCTCAT-ATCCACAAGACATTCTCTTGCATTTAACC--TAGCATTCTCAGATTCAGTAACTCCT----TTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTcaaaga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086290 246 + 77229886 CAGTATGAGACA--C--CAGGCCTGACTTCTCCAATA--TCTCTGTCTCAGCTGTTATCTAAATATCTTATCCA---GTGGCTCTTCCAGAGTCTCCACCAGCTTGTCCTCAT-ATCCACAAGACATTCTCTTGCATTTAACC--TAGCATTCTCAGATTCAGTAACTCCT----TTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTcaaaga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307228 246 + 17472758 CAGTATGAGACA--C--CAGGCCTGACTTCTCCAATA--TCTCTGTCTCAGCTGTTATCTAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAGTTTGTCCTCAT-ATCCACAAGACATTCTCTTGCATTTAACC--TAGCATTCTCAGATTCAGTAACTCCT----TTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTcaaaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346138 248 - 152096393 CAGTATGAGACA--C--CAGGCCTGACTTCTCCAATA--TCTCTGTCTCAGCTGTTATCTAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAGTTTGTCCTC---ATCCACAAGACATTCTCTTGTGTTTAACC--TAGCATTCTCAGATTCAGTAACTCCTTTCATTGTCCTCTCACCACTTCCCAAAAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTCAAAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57300779 251 + 70235451 CAGTATGAGACA--T--GAGGCCTGACTTCTTCAATA--TCCCTGTCTCAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAG-TTGTCCTCAT-ATTCACAAGACATTCTCTTGTGTTTAACCTATAGCATTCTCAGATTCTATAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGTTT---GGCTGTTCCCTCCACATGTTCAAAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992193 251 - 75711847 CAGTATGAGACA--T--GAGGCCTGACTTCTTCAATA--TCCCTGTCTCAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAG-TTGTCCTCAT-ATTCACAAGACATTCTCTTGTGTTTAACCTATAGCATTCTCAGATTCTATAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGTTT---GGCTGTTCCCTCCACATGTTCAAAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13544898 251 - 18804593 CAGTATGAGACA--T--GAGGCCTGACTTCTTCAATA--TCCCTGTCTCAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAG-TTGTCCTCAT-ATTCACAAGACATTCTCTTGTGTTTAACCTATAGCATTCTCAGATTCTATAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGTTT---GGCTGTTCCCTCCACATGTTCAAAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161684 251 + 18905526 CAGTATGAGACA--C--CAGGCCTGACTTCTTCAATA--TCCCTGTCTTAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCTACCTG-TTGTCCTCAT-ATTCACAAGACATTCTCTTGTGTTTAACCTATAGCATTCTCAGATTCTATAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGTTT---GGCTGTTCCCTCCACACGTTCAAAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991351 252 - 72318688 CAGTATGAGACA--C--CAGGCCTGACTTCTTCAATA--TCCCTGTCTCAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCCACCAGTTTGTCCTCAT-ATTCACAAGGCATTCTCTTGCGTTTAACCTATAGCATTCTCTGGTTCTATAACTCCTTTCATTGTCCTCTCACCACTTCCCAATAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTCAGAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325366 251 - 1517660 CAGTATGAGACA--C--CAGGCCTGACTTCTTCAATA--TCCCTGTCTCAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTCCAGAGTCTCTACCTG-TTGTCCTCAT-ATTCACAAGACATTCTCTTGTGTTTAACCTATAGCATTCTCAGATTCTGTAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGC-----------CACTTTTCAGTTT---GGCTGTTCCCTCCACATGTTCAAAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425164 252 + 6513552 CAGTATGAGATA--C--CAGGCCTGACTTCTTCAATA--TCCCTGTCTCAACTGTTATCCAAATATCTTATCCA---GTGGCTTTTTCAGAGTCTCTACCAGTTTGTCCTCAT-ATTCACAAGACATTCTCTTGCGTTTAATCTATAGCATTCTCAGATTCTATAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAACTAT-CCTTTA--------AAGCAAATTCAGT-----------CACTTTTCAGCTT---GGCTGTTCCCTCCACATGTTCAAAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105205046 250 + 117903854 CAGTATGCAACA--C--CAGGCCTGACTTATCTAATA--TTTCTGTCTCAGCTGTTATCCAAATATCTTATCCA---GTGGCTTTGCCAGAGTCTCCACCAGTTCCTCCTCAT-ATCCACAAGACATGCTCTTGCCTTTCACC--TAGTATTGTCACATTCAGTAACTCCTTTCATTATCCTCTCACCACTTTCTGAGAACTAT-CCTTCA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCTCTCCACATGTTCAAAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396389 250 - 31320352 CAGTATGTAACA--C--CAGGCATGACTTATCTAATA--ATTCTGTCTCAGCTGTTATCCAAATCTCTTATCCA---GTGGCTTTGCCAAAGTCTCCACCAGTGCATCCTCAT-ATCCACCAGACACGCTCTTGCCTTTCACC--TAGTATTCTCACATTCAGTAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAATTAT-CCTTCA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTATTCTCTCCACATGTTCAAAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585535 250 + 2203405 CAGTATGTAACA--C--CAGGCCTGACTTATCTAATA--TTTCTGTCTCAGCCGTTATCCAAATCTCTTATCCA---GTGGCTTTGCCAAAGTCTCCACCAGTTCATCCTCAT-ATCCACAAGACATGCTCTTGCCTTTCACC--TAGTATTCTCACATTCAGTAACTCCTTTCATTGTCCTCTCACCACTTCCCAAGAATTAT-CCTTCA--------AAGCAAATTCAGC-----------CACTTTTCACCTT---GGCTGTTCTCTCCACATATTCAAAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3541912 249 - 14941987 CAGTATGCAACA--C--CA-GCCTGACTTATCTAATA--TTTCTGTCTCAGTTGTTATCCAAATCTCTTATCCA---GTGGCTTTGCCAGAGTCTCCACCAGTTCATCCTCAT-ATCCACAAGACACGCTCTTGCCTTTCACT--TAGTATTCTCACATTCAGTAACTCCTTTCATTGTCCTCTCACCTCTTCCCAAGAACTAT-CCTTCA--------AAGCAAATTCAGC-----------CACTTTTCAGCTT---GGCTGTTCTCTCCACATGTTCAAAGA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11202037 260 - 20685099 CAGCATGGGGCAGTC--CAGGCCACAATTACCCAAGAGCTCTTTGTCTCAGCATTTCTCCAGGTCTCTCATCCA---ATGGCACTTCCAGAGACTGTACCCATTTTCCTTCTT-GTCTACCAGACGT--CCTTGCCATTAACC--TGGTATCCTCGGATCTTGTAACTCCTGTCATTGTCCTCTAACTACTTCCCAACGACTGT-CCCTCAGTGGGGTGAGGAACAT---GG-----------CATCTTCCAGTTTCAAGACTGTTCTTTTTGAAGCACCAAAGA i otoGar3.GL873546 C 0 I 156 s dasNov3.JH575754 428208 214 - 2150887 CAATATGAGTCA--CTGCAGACCTGGGTT------TA--TCC-------------------AGTGACTGGTGGAGGCGTGGTACTCCCAGAGGCCTTTAGAGTCTGCCCTCATGGTCCAACAGATCAGCCTCTGCCCTTAACC-------------------------------ACTGTCCTCTTTCCACTTCCCAAAGACTACGCCCCCT--------AAGCAAATTCAACTAAATATGCCTCGTTCTTCCCCTG---GGCTCTTCCCCCATAGTGCTTAGACA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e canFam3.chr1 112268984 1216 - 122678785 I a score=1123994.000000 s hg38.chr18_GL383571v1_alt 13548 108 + 198278 GAATTGATATTGAGACATTATGATTCTGTGGTATGCTTTCTAGCCAGATATAACAGCAGACTTCA-TTTTCCCTTTGTCTTTG-CATAAGTGTGCAACGGATCTTAACAG s panTro5.chr18 64964197 108 + 78221452 gaattgatattgagacattatgattctgtggcatgctttctagccagatataacagcagacttca-ttttccctttgtctttg-cataagtgtgcaatggatCTTAACAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086536 108 + 77229886 gaattgatattgagacattatgattctgtggcatgctttctagccagatataacagcagacttca-ttttccctttgtctttg-cataagtgtgcaatggatCTTAACAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307474 108 + 17472758 gaattgatattgagacattatgattctgtagcatgctttctagccagatataacagcagacttca-ttttccctttgtctttg-cataagtgtgcaatggatCTTAACAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346386 108 - 152096393 GAATTGATATTGAGACATTATGATTCTGTGGCATGCTTTCTAGCCAGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CATAAGTGTGCAATGGATCTTAACAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301030 108 + 70235451 GAATTGATATTGAGACAGTATGATTCTGTGGCATGCTTTCTAGCCCGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CGTAAGTGTGCAATGGATCTCAACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992444 108 - 75711847 GAATTGATATTGAGACAGTATGATTCTGTGGCATGCTTTCTAGCCCGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CGTAAGTGTGCAATGGATCTCAACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545149 108 - 18804593 GAATTGATATTGAGACAGTATGATTCTGTGGCATGCTTTCTAGCCCGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-TGTAAGTGTGCAATGGATCTTAACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13161935 109 + 18905526 GAATTGATATTGAGACAGTATGATTCTGTGACATGCTTTCTAGCCCGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTGCCGTAAGTGTGCAATGAATCTTAACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991603 108 - 72318688 GAATTGATATTGAGACATTATGATTCTGTGGCATGCTTTCTAGCCCGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CGTAAGTGTGCAATGGATCTTAACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325617 108 - 1517660 GAATTGATATTGAGACAGTATGATTCTGTGGCATGCTTTCTAGCCCGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CGTAAGTGTGCAATGGATCTTAACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425416 108 + 6513552 GAATTGATATTGAGACAGTATGATTCTGTGGCATGCTTTCTAGCCCGACATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CATAAGTGTGCAATGGATCTCAACAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105205296 108 + 117903854 GAATTCATATTGAGATATTATGATTCTGTGACATGCCTTCTACCCAGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CATAAGCATGCAAATGACCTTAACAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396639 109 - 31320352 GAATTCATATTGAGATATTATGAGTCTGTGTCATGCCTTCTACCCAGATTTAAGAGTAGACTTCATTTTTCCCTTTGTCTTTG-CATAAGCATGCAAATGACCTTACCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585785 108 + 2203405 GAATTCATACTGAGATATTACGAGTCTGTGTCATCCCTTCTACCCAGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CATAAGCATGCAAATGACCTTAACAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542161 108 - 14941987 TAATTCATATTGAGATATTATGATTCTGTGTCGTGCCTTCTACCCAGATATAAGAGTAGACTTCA-TTTTCCCTTTGTCTTTG-CATAAGCATGCAAATGACCTTAACAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11202453 106 - 20685099 GAATTTATATTCAGGTACCCTAATTCTACAACTTGCCTTAGAGCCAAATGT--GAGTATGCTTTA-TCTTCCCCATGCCTTTG-CATAAGAGGGCAAAAAACCCAAATGG i otoGar3.GL873546 I 156 I 281 s dasNov3.JH575754 428422 102 - 2150887 GAAATGACATCTAGGAATTATG---CAGTGATGC-CTTTGTGCCCTGATATAAAAG-AGGGTGTA-TTTTCCATTTAGTTTGG-C-TAAGAGCAAAAAGGATTTGTACAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e canFam3.chr1 112268984 1216 - 122678785 I a score=99305.000000 s hg38.chr18_GL383571v1_alt 13656 13 + 198278 TGTTTGTCAAG-TT s panTro5.chr18 64964305 13 + 78221452 CGTTTGTCAAG-TT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086644 13 + 77229886 CGTTTGTCAAG-TT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307582 12 + 17472758 CGTTTGTC-AG-TT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346494 13 - 152096393 CATTTGTCAAG-TT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301138 13 + 70235451 TGTTTGTCAAG-TT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992552 13 - 75711847 TGTTTGTCAAG-TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545257 13 - 18804593 TGTTTGTCAAG-TT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162044 13 + 18905526 TGTTTGTCAAG-TT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991711 13 - 72318688 TGTTTGTCAAG-TA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325725 13 - 1517660 TGTTTGTCAAG-TT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425524 13 + 6513552 TGTTTGTCAAG-TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105205404 12 + 117903854 CGTTTGTCAGG--T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396748 14 - 31320352 TTTTTGTCAGGTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585893 13 + 2203405 TGTTTGTCAGG-TT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542269 13 - 14941987 TGTTTGTCAGG-TT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 428524 12 - 2150887 AGTCTG-CACA-TA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e canFam3.chr1 112268984 1216 - 122678785 I e otoGar3.GL873546 11202559 281 - 20685099 I a score=1312510.000000 s hg38.chr18_GL383571v1_alt 13669 129 + 198278 TTTTTGTTCTGATTTTTCAAG-------------------CTG---AGTATTGGCAACAGGTACACCATATAGGCTTGCTTTTTGTTCAAGTATGAATGTGCCT---TTTTCCCCAA-TGTTAAGTTATT-TATTGACATTACCAGCAGCTTAATG s panTro5.chr18 64964318 129 + 78221452 TTTTTGTTCTGATTTTTCAAG-------------------CTG---AGTATTGGCAACAGGTATACCATATAGGCTTGCTTTTTGTTCAAGTATGAATGTGCCT---TTTTCCCCAA-TGTTAAGTTATT-TATTGACATTACCAGCAGCTTAATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086657 129 + 77229886 TTTTTGTTCTGATTTTTCAAG-------------------CTG---AGTATTGGCAACAGGTATACCATATAGGCTTGCTTTTTGTTCAAGTATGAATGTGCCT---TTTTCCCCAA-TGTTAAGTTATT-TATTGACATTACCAGCAGCTTAATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307594 129 + 17472758 TTTTTGTTCTGATTTTTCAAG-------------------CTG---AGTATTGGCAACAGGTACACCATATAGGCTTGCTTTTAGTTCAAGTATGAATGTGCCT---TTTTCCCCAA-TGTTAAGTTATT-TATTGACATTACCAGCAGCTTAATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346507 146 - 152096393 TTTTTGTTCTGATTTTTCAAGTTTCAGAA-AATCTCAT-CCTG---AGTATTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGCCT---TTCCCCCCAA-TGTTAAGTTATT-TATTGACATTACCAGCAGCTTAATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301151 142 + 70235451 TTTTTGTTCTGATTTTTCAAGCTTCAGAAGAACCTCAT-CCTG---AGTGTTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGACT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCGGCTTAATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992565 142 - 75711847 TTTTTGTTCTGATTTTTCAGGCTTCAGAAGAACCTCAT-CCTG---AGTGTTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGACT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCGGCTTAATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545270 143 - 18804593 TTTTTGTTCTGATTTTTCAAGCTTCAGAAGAACCTCATCCCTC---AGTGTTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGACT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCGGCTTAATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162057 142 + 18905526 TTTTTGTTCTGATTTTTCAAGCTTCAGAAGAACCTCAT-CCTG---AGTGTTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGACT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCAGCTTAATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991724 142 - 72318688 TTTTTGTTCTGATTTTTCAAGCTTCAGGAGAATCTCAT-CCTG---AGTATTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGCCT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCAGCTTAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325738 142 - 1517660 TTTTTGTTCTGATTTTTCAAGCTTCAGAAGAACCTCAT-CCTG---AGTGTTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGACT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCAGCTTAATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425537 142 + 6513552 TTTTCGTTCTGATTTTTCAAGCTTCAGAAGAATCTCAT-CCTG---AGTATTGGCAACAGGTACACCACATAGGCTTGCTTTTTGTTCAAGTATGAATGTGCCT---TGTTCCCCAA-T-----GTTATT-TATTGACATTACTAGCAGCTTAATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105205416 145 + 117903854 TTTTTGTACTGATTTTTCAAGCTTCAGAA-AATCTCAT-CCTG---AGTATTGGCAGCAGGTACACCATATAGGCTTGCTTTTTGTTCTGGTATGCATGTTCCT---TTTTCCTTCAGTGTTTAGTTATT-TATTGATATTATCAGCAGCTTAA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396762 123 - 31320352 TTTTTGTACTGATTTTTCAAGCTTCAGAA-AATCTCAT-CCTG---AATATTGGCAGCAGGTACACCATAAAGGCTTGCTTTTTATTCTGGTA-------------------------TGTTTAGTTATT-TATTGACATTATCAGCAGCTTAA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1585906 144 + 2203405 TTTTTGTACTGATTTTTCAAGCTTCAGAA-AATCTCAT-CCTG---AGTATTGGCAGCAGGTACACCATATAGGCTTGCTTTTTGTTCTGGCATGCATGTGCCT---TTTCCCCCAA-TGTTTAGTTATT-TATTGACATTATCAGCAGCTTAA-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542282 144 - 14941987 TTTTTGTACTGATTTTTCAAGCTTCAGAA-TATCTCAT-CCTG---AGTATTGGCAGCAGGTACACCATATAGGCTTGCTTTTTGTTCTGGTATGCATGTGCCT---TTTCCCCCAA-TGTTTAGTTATT-TATTGACATTATCAGCAGCTTAA-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11202840 144 - 20685099 TTTTAGTACTAATTTTTCAAGCTTCGGAA-AATCACAT-CCCAAGTAGTATCAGCAGTGGGTGTTCCATATAGGCTTGCTTTTTGTTAGGGTATAAATATG---------TGCCCTA-TTTTGTTTTATTGTATTTATTTTCATTTCAGGTTAATG i otoGar3.GL873546 I 281 I 161 s dasNov3.JH575754 428536 147 - 2150887 CTTTGGTACTGATTTTTCAAGCTTCAGAA-ACTCTAAT-CTGG---AATACTTGCAGGAGGTACATGATATAGGCTTGCTTTCCATTAAGGTACAAATAGGCATTAATTTTTTTCAG-T--TCAATTATC-TACTGAGGTTACCAGCAGCTTAATG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e canFam3.chr1 112268984 1216 - 122678785 I a score=351184.000000 s hg38.chr18_GL383571v1_alt 13798 52 + 198278 GTAAGAAGTAAAATATAAAGATGTGAAAA---TGGTTGATGGAATATtgttacca s panTro5.chr18 64964447 52 + 78221452 GTAAGAAGTAAAATATAAAGATGTGAAAA---TGGTTGATGGAATATtgttacca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086786 52 + 77229886 GTAAGAAGTAAAATATAAAGATGTGAAAA---TGGTTGATGGAATATtgttacca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307723 52 + 17472758 GTAAGAAGTAAAATATAAAGATGTGAAAA---TGGTTGATGGAATATtgttacca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346653 52 - 152096393 ATAAGAGGTAAAATATAAAGACATGAAAA---TGGTTGATGGAATATtgttacca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301293 52 + 70235451 ATAAGAAGTAAAATATAAAGATATGAAAA---TGGTTGATGGAATATtgttacca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992707 52 - 75711847 ATAAGAAGTAAAATATAAAGATATGAAAA---TGGTTGATGGAATATtgttacca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545413 52 - 18804593 ATAAGAAGTAAAATATAAAGATATGAAAA---TGGTTGATGGAATATtgttacca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162199 52 + 18905526 ATAAGAAGTAAAACATAAAGATATGAAAA---TGGTTGATGGAATATtgttacca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991866 52 - 72318688 ATAAGAAGTAAAATATAAAGATATGAAAA---TGGTTGATGGAATATTGTTACCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325880 52 - 1517660 ATAAGAAGTAAAACATAAAGATATGAAAA---TGGTTGATGGAATATtgttacca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425679 52 + 6513552 ATAAGAAGTAAAATATAAAGATATGAAAA---TGGTTGATGGAATATtgttacca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105205561 18 + 117903854 -------------------------------------GATGGAATATtgttacca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396885 18 - 31320352 -------------------------------------GATGGAATATtgttacca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586050 18 + 2203405 -------------------------------------GATGGAATATtgttacca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542426 18 - 14941987 -------------------------------------GATGGAATATtgttacca i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 428683 54 - 2150887 ATAAGGAATAAAATAGATAGAAGTAAAAAGACTAGTTGATGG-GTATCATTCCCA i dasNov3.JH575754 C 0 I 10 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e canFam3.chr1 112268984 1216 - 122678785 I e otoGar3.GL873546 11202984 161 - 20685099 I a score=4721240.000000 s hg38.chr18_GL383571v1_alt 13850 476 + 198278 aaatggcaaggttctgatgctcactgcacagggagccaatcactgaga---taatgagtatttccaggcaggaaggctttaa-ctgggtgcttcagctgaggagagcagatcagtctcaaattggtctcctgacagactaaaattaggggtttatataacagggaagaaacgtaaccatgtgtgggaaaacaggaactggggaggggttagaaagaagagtggatcaataggaagcagttgggcgctttggccatcatgatgggtaaggggtctggtttctcattgtccatatgcggtgatctggtgagtttcagctctttgatattatctgggagggctgatggttggtttcctgagaaaggaactcagatgagacaaaggtaactttctcaaatttcaagactgggagggtcaatttctgtgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA s panTro5.chr18 64964499 476 + 78221452 aaatggcaaggttctgatgctcactgcacagggagccaatcactgaga---taatgagtatttccaggcaggaaggctttaa-ctgggtgcttcagctgaggagagcagatcagtctcaaattggtctcctgacagactaaaattaggggtttatataacagggaagaaatgtaaccatgtgtgggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggtggtcgctttggccatcatgatgggtaaggggtctggtttctcattgtccatatgcggtgatctggtgagtttcagctctttgatattatctgggagggctgatggttggtttcctgagaaaggaactcagataagacaaaggtaactgtctcaagtttcaagactgggagagtcaatttctgtgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64086838 476 + 77229886 aaatggcaaggttctgatgctcactgcacagggagccaatcactgaga---taatgagtatttccaggcaggaaggctttaa-ctgggtgcttcagctgaggagagcagatcagtctcaaattggtctcctgacagactaaaattaggggtttatataacagggaagaaatgtaaccatgtgtgggaaaacaggaactggggaggggttagaaagaagaattgatcaataggaagcaggtggtcgctttggccatcatgatgggtaaggggtctggtttctcattgtccatatgcggtgatctggtgagtttcagctctttgatattatctgggagggctgatggttggtttcctgagaaaggaactcagataagacaaaggtaactgtctcaagtttcaagactgggagagtcaatttctgtgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5307775 472 + 17472758 aaatggcaaggttctgatgctcactgcacagggagccaatcactgaga---taatgagtatttccaggcaggaaggctttaa-ctgggtgcttcagctgaggagagcagatcagtctcaaattggtctcctgacagactaaaatta-gggtttatataacagggaagaaacgtaacca--tgtgggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggtggtcgctttggccatcatgatgggtaa-gggtctggtttctcattgtccatgtgcggtgatctggtgagtttcagctctttgatattatctgggagggctgatggttggtttcctgagaaaggaactcagataagacaaaggtaactttctcaagtttcaagaccaggagggtcaatttctgtgtttattcgaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139346705 476 - 152096393 aaatggcaaggttctgatgctcactgcacagagagccaatcactgaga---caatgagtatttccaggcaggaaggctttaa-ctgggtgcttcagccaaggagagcagatcagtcttaaattggtctcctgacagactaaaattaggggtttatatagcagggaagaaatgtaaccatgtgtgggaaaacaggaactggggaagggttagaaagaagagttgatcaataggaagcaggtggtcgctttggccatcatgatgggtaaggggtctggtttctcattgtctgtatgcagtgatctggtgagtttcagctctttgatattatctgggagggctgatggttggtttcctgagaaaggaactcagataacacaaaggtaactttctcaggtttcaagactgggagggtcaatttctgtgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301345 476 + 70235451 aaatggcaaggttctgatgctcactgcacagagagccaatcactgaga---caatgagtatttccaggcaggaaggcttttg-tcgggtgcttcacctgaggagagcagatcagcctcaaattggtctcctgacagactaaaattaggcgtttatgttgcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggtggtcacttaggccatcatgatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgatggttggtttcctgagaaaggaactcagataagacataggtaactttctcaagtttcaagattgggagggtcaatttctatgtttattcaaaagaaaccataaacattagttttatggaacaattgggctagtttAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62992759 476 - 75711847 aaatggcaaggttctgatgctcactgcacagagagccaatcactgaga---caatgagtatttccaggcaggaaggcttttg-tcgggtgcttcacctgaggagagcagatcagcctcaaattggtctcctgacagactaaaattaggcgtttatgttgcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggtggtcacttaggccatcatgatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgattgttggtttcctgagaaaggaactcagataagacataggtaactttctcaagtttcaagattgggagggtcaatttctatgtttattcaaaagaaaccataaacattagttttatggaacaattgggctagtttAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545465 476 - 18804593 aaatggcaaggttctgatgctcactgcacagagagccaatcactgaga---caatgagtatttccaggcaggaaggcttttg-tcgggtgcttcacctgaggagagcagatcagcctcaaattggtctcctgacagactaaaattaggcgtttatgttgcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggtggtcacttaggccatcatgatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgatggttggtttcctgagaaaggaactcagataagacataggtaactttctcaagtttcaagattgggagggtcaatttctatgtttattcaaaagaaaccataaacattagttttatggaacaattgggctagtttAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162251 476 + 18905526 aaatggcaaggttctgatgctccctgcacagagagccaatcactgaga---caatgagtatttccaggcaggaaggcttttg-ttgggtgcttcagctgaggagagcagatcagtctcaaattggtctcctgacagactaaaattaggtgtttatgtagcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggttgtcacttaggccatcatgatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgatggttgatttcctgagaaaggaactcagataagacatagataactttctcaagtttcaagattgggagggtcaatttctatgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59991918 476 - 72318688 AAATCtcaaggttctgatgctcactgcacagagagccaatcactgaga---caatgagtatttccaggcaggaaggctttca-ttgggtgcttcagctgaggagagcagatcagtatcaaactggtctcctgacagactaaaattaggagtttatgtggcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaggcaggtggtcacttaggccatcatgatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgatggttagtttcctgagaaaggaactcagataagacataggtaactttctcaagtttcaagactgggagggtcaatttctatgtttattcaaaagaaaccataagcattagttttgtggaacaactgggccagtttAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 325932 476 - 1517660 aaatggcaaggttctgatgttccctgcacagagagccaatcactgaga---caatgagtatttccacgcaggaaggcttttg-ttgggtgcttcagctgaggagagcagatcagtctcaaattggtctcctgacagactaaaattaggtgtttatgtagcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaacaggaagcaggtagtcacttaggccaacatgatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgatggttggtttcctgagaaaggaactcagataagacataggtaactttctcaagtttcaagattgggagggtcaatttccatgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3425731 476 + 6513552 aaatggcaaggttctgatgctcactgcacagacagccaatcactgaga---caatgagtatttccaggcaggaaggctttca-ttgggtgcttcagttgaggagagcagatcagtctcaaattggtctcctgacagactaaaattaggcatttatgtagcagggaagaaatgtaaccatgtgttggaaaacaggaactggggaggggttagaaagaagagttgatcaataggaagcaggtggtcacttaggccatcataatgggtaaggggtctgttttctcattgtccatatgcagtgatctggtgagtttcagctctttgatattatctgagaggactgatggttggtttcttgagaaaggaactcagataagacataggtaactttctcaagtttccagactgggagggtcaatttctatgtttattcaaaagaaaccataaacattagttttatggaacaattgggccagtttAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105205579 475 + 117903854 aaatggcagggttttgatgctcactgcacagacagacaatcactgaga---caatgaatctttccagacaggaaggcttcaa-ttgggtgcttcagttgagggtagcagatcattctcaaattggtctcttgatagactaaaattaggggtttatatggcagggaagaaatgtaaccatgtgtgggaaaacaggaacaggggaggggttagaaagacgagttgatcagtaggaagcagatggttgcttacgtcatcatgacaggtatggggtctggtttctcattgtctattggtggtgatctggagagtttcagctgtctactactatctgagaggactgatggttggttccctgagaaaggaactcagataagagaaaagtaactttctc-agtttcaagactgggagggtcaatttttgtgtttattcaaaagaaaccataaacatcaattttatggaaaaattgagccagtttAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19396903 473 - 31320352 aaatggcagggttttgatgctcactgtacagagagccaatcgctgaga---caatgaggcttttcaggcaggaaggctttaatttgggtgcttcagctgaggggagcagatcagtctcaaattagtctcccgatagactacaattaggggtttatatggcagggaagaaatgtaaccatgtatgggaaaaccggaactggggaggggttagaaagacgagttgatcagtaggaagcagatggttgcttaggttgtcatgacaggtatggggtctggtttctcattgcctgtatgtggtgatctggagagtttcagctgtttgatactatcttggaggactga----tggtttcctgagaacagaacgcagataagacaaaagtaactttctcaagtttcaagactgggagggtcaatttctgtgtttattccaaagaaatcataagcatcagttttttggaacgattgagccagtttaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586068 479 + 2203405 aaatggcagggttttgatgctcactgcacagagagccaatcgcagagagccaaatgagtctttccaggcaggaagggtttaa-ttgggtacttcagctgaggggagcagatcagtctccaattggtctcctgatagactacaatgaggggtttatatggcagggaagaaatgtaaccatgtgtgggaaaacaggaactggggaggggttagaaagacgagttgatcagtaggaagcagatggttgcttaggtcatcatgacaggtatggggtctggtttcttattgtctatatgtggtgatctggagaatttcagctgtttgatactatctgggaggactgatggttggtttcctgagaacggaactcagataagacaaaagtaactttctcaagtttcaagactgggagggtcaatttctgtgtttattcaaaataaaccataaacatcagttttatggaacaattgagccagtttAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542444 476 - 14941987 aaatggtggggttttgatgcttactgcacagagagccaatcactgaga---caatgagtctttccaggcaggaaggctttaa-ttgggtgcttcagctgaggggagcagatcagtctcaaattggtctcctgatagactaaaattaggggtttatatggcagggaagaaatgtaatcatgtgtgggaaaacaggaactggggaagggttagaaagacgagttgatcagtaggaagcagatggttgcttaggtcatcatgacaggtatggggtctggtttctcattgtctatatgtggtgatctggagagtttcagctgttagagactatctgggaggactgatggttggtttcctgagaaaggaactcagataagacaaaagtaactttctcaagtttcaagactgggaaggtcaatttctgtgtttattcaaaagaaaccataaacatcagttctttggaacaactgaaacagtttAAA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e dasNov3.JH575754 428737 10 - 2150887 I e canFam3.chr1 112268984 1216 - 122678785 I e otoGar3.GL873546 11202984 161 - 20685099 I a score=110554.000000 s hg38.chr18_GL383571v1_alt 14326 16 + 198278 TATCA------------------------------------------TTCCCATT-----ACG s panTro5.chr18 64964975 16 + 78221452 TATCA------------------------------------------TTCCCATT-----ACG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087314 16 + 77229886 TATCA------------------------------------------TTCCCATT-----ACG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308247 16 + 17472758 TATCA------------------------------------------TTCCCATT-----ACG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347181 16 - 152096393 TATCA------------------------------------------TTCCCATT-----ACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301821 16 + 70235451 TATCA------------------------------------------TTCCCATT-----ACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993235 16 - 75711847 TATCA------------------------------------------TTCCCATT-----ACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545941 16 - 18804593 TATCA------------------------------------------TTCCCATT-----ACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162727 16 + 18905526 TATCA------------------------------------------TTCCCATT-----ACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992394 16 - 72318688 TATCA------------------------------------------CTCCCATT-----ACG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326408 16 - 1517660 TATCA------------------------------------------TTCCCATT-----ACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426207 16 + 6513552 TATCA------------------------------------------TTCCCATT-----ACG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206054 21 + 117903854 TATTG------------------------------------------TTCCCATTACTTAACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397376 63 - 31320352 tattgatattaaataatgatattaataaataatgatattaaatatCATTCCCGTTACTTAACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586547 21 + 2203405 TATCG------------------------------------------TTCCCATTACTTAACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542920 21 - 14941987 TATCT------------------------------------------TTCCCATTACTTAACT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11203145 21 - 20685099 TATCA------------------------------------------TTCCCACTACTTGAAT i otoGar3.GL873546 I 161 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e dasNov3.JH575754 428737 10 - 2150887 I e canFam3.chr1 112268984 1216 - 122678785 I a score=704407.000000 s hg38.chr18_GL383571v1_alt 14342 66 + 198278 TAGGGGATGAAAACCTTGGCCTCGTCCATTTCTTTGCGTAAACTTTCCAACACAGTTCAAGGTTTC s panTro5.chr18 64964991 65 + 78221452 TAGGGGATGAAAACCTTGGCCTCGTCCATTTCTTTGC-TAAACTTTCCAGTACAGTTCAAGGTTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087330 65 + 77229886 TAGGGGATGAAAACCTTGGCCTCGTCCATTTCTTTGC-TAAACTTTCCAGTACAGTTCAAGGTTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308263 66 + 17472758 TAGGGGATGAAAACCTTGGCCTCGTCCATTTCTTTGCGTAAACTTTCCAACACAGTTCAAGGTTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347197 66 - 152096393 TAGGGAATGAAAGCCTTGGCCTCATCCATTTCTTTGTGTAAACTTTCCAATACAGTTCAAGGTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301837 66 + 70235451 TAGGGGATGAAAGCCTTGGCCTCGTCCATTTCTTTGCATAAACTTTCCAGTACAGTTCAAGGTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993251 66 - 75711847 TAGGGGATGAAAGCCTTGGCCTCGTCCATTTCTTTGCATAAACTTTCCAGTACAGTTCAAGGTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13545957 66 - 18804593 TAGGGGATGAAAGCCTTGGCCTCGTCCATTTCTTTGCATAAACTTTCCAGTACAGTTCAAGGTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162743 66 + 18905526 TAGGGGATGAAAGCCTTGGCCTCGTCCATTTCTTTGCATAAACTTTCCAATATAGTTCAAGGTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992410 66 - 72318688 TAGGGGATGAAAGCCTTGGCCTCGTCCATTTCTTTGCATAAACTTTCCAATACAGTTCAAGGTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326424 66 - 1517660 TAGGGGATGAAAGCCTTGGCCTCGTCCATTTCTTTGCATAAACTTTTCAATACAGTTCAAGGTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426223 66 + 6513552 TAGGGGATGAAAGCCTTGGCCTTGTCCATTTCTTTGCATAAACTTTCCAATACAGTTCAAGGTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206075 66 + 117903854 TACAGGATGAAAGCCTTGGCCTTGTCCTTTGCTTTGTGTAAACTATCCAAAACAGTTCCAAGTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397439 66 - 31320352 TAGGGGATGAAAGCCTTGGCCTTGCCCATTGCTTTGTGTAAACTATCCAATACAGTTCCAAGTATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586568 66 + 2203405 TAGGGGATGAAAGCCTTGGCCTTGTCCATTGCTTTGTGTAAACTATCCAATACAGTTCTAAGTATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3542941 66 - 14941987 TAGGGGATGAAAGCCTTGGCCTTGTCCATTGCTTTGTGTAAACTATCCAATACAGTTCCAAGTTTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11203166 66 - 20685099 TGAGTGATTAAAGCTTTGCTCTTGTTACTTTCTCTTTGTAAACTCTCTAACAGCGTGGGATATTTT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 428747 65 - 2150887 TAAGGGAACAAAACCTTGATCTTGTCAATTTCTTTCTGTAAACTCTCAGATGCAGTTGAAATTTT- i dasNov3.JH575754 I 10 C 0 e proCoq1.NW_012148742v1 1212691 1527 - 1406956 I e canFam3.chr1 112268984 1216 - 122678785 I a score=431362.000000 s hg38.chr18_GL383571v1_alt 14408 38 + 198278 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA s panTro5.chr18 64965056 35 + 78221452 CATTCCACCAAGAATCATTATAATT-------ATTACTGTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087395 35 + 77229886 CATTCCACCAAGAATCATTATAATT-------ATTACTGTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308329 38 + 17472758 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347263 38 - 152096393 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301903 38 + 70235451 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993317 38 - 75711847 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546023 38 - 18804593 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162809 38 + 18905526 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992476 38 - 72318688 CATTCCATCAAGAGTCATTATAATT----ATCATTACTGTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326490 38 - 1517660 CATTCCACCAAGAATCATTATAATT----ATCATTACTGTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426289 38 + 6513552 CATTCCACCAAGAATCATCATAATT----ATCATTACTGTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206141 38 + 117903854 CATCCCAACAAATATCATTATAATT----ATCATTTCTGTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397505 35 - 31320352 CATTCCACCAAAT---ATTATAATT----ATCATTACTCTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586634 38 + 2203405 CATTCCACCAAATATCATTATAATT----ATCATTACTCTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543007 38 - 14941987 CATTCCACCAAATATCATTATAATT----ATCATTACTGTGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1214218 38 - 1406956 CATCCCACCAAGAATCATTATAATT----TTAATTACCATCA i proCoq1.NW_012148742v1 I 1527 C 0 s otoGar3.GL873546 11203232 42 - 20685099 CATCCCAACAGTTGTCACTATAAATGTCCTTAGTATCTATCA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 428812 36 - 2150887 CATCCCACTCAG--TCATTAAAATG----ATCATTTCTGTCA i dasNov3.JH575754 C 0 I 3708 e canFam3.chr1 112268984 1216 - 122678785 I a score=13923.000000 s hg38.chr18_GL383571v1_alt 14446 1 + 198278 T s panTro5.chr18 64965091 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087430 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308367 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347301 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301941 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993355 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546061 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162847 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992514 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326528 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426327 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206179 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397540 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586672 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543045 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1214256 1 - 1406956 T i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11203274 1 - 20685099 T i otoGar3.GL873546 C 0 C 0 e dasNov3.JH575754 428848 3708 - 2150887 I e canFam3.chr1 112268984 1216 - 122678785 I a score=1002622.000000 s hg38.chr18_GL383571v1_alt 14447 90 + 198278 AAAGTTAAGTGTAACATCTT-T--ACTTCCAGAACCATAAATCCTTATTAATAATAATAGCAGCAGTTGGTCAAGCTAATATAATATTTTAAA s panTro5.chr18 64965092 90 + 78221452 AAAGTCAAGTGTAACATCTT-T--ACTTCCAGAACCATAAATCCTTATTAATAATAATAGTAGCAGTTGGTCAAGCTAATATAATATTTTAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087431 90 + 77229886 AAAGTCAAGTGTAACATCTT-T--ACTTCCAGAACCATAAATCCTTATTAATAATAATAGTAGCAGTTGGTCAAGCTAATATAATATTTTAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308368 90 + 17472758 AAAGTCAAGTGTAACATCTT-T--ACTTCCAGAACCATAAATCCTTATTAATAATAATAGTAGCAGTTGGTCAAGCTAATATAATATTTTAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347302 90 - 152096393 AAAGTCAAGTGTAACATCTT-T--ACTTTCAGAACCATAAATCATTATTAATAATAATAGTAGCAGTTGGTCAAGCTAATATAATATTTCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57301942 85 + 70235451 AAAGTCAAGTGTAACAT--------CTTCTGGAACTATAAATCATTATTAATAATAATAGTAGCAGTTGGTGAAGCTAATATAATATTTTAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993356 85 - 75711847 AAAGTCAAGTGTAACAT--------CTTCTGGAACTATAAATCATTATTAATAATAATAGTAGCAGTTGGTGAAGCTAATATAATATTTTAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546062 85 - 18804593 AAAGTCAAGTGTAACAT--------CTTCTGGAACTATAAATCATTATTAATAATAATAGTAGCAGTTGGTGAAGCTAATATAATATTTTAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162848 90 + 18905526 AAAGTCAAGTGTAACATCTT-T--ACTTCTGGAACTATAAATCATTATTAATAATAATAGTAGCAGTTGGTGAAGCTAATATAATATTTTAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992515 90 - 72318688 AAAGTCAAGTGTAACATCTT-T--ACTTCTGGAACCATAAATCATTATTAATAATAATAGTAGCAGTTGGTCAAGCTAATATAATATTTTAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326529 90 - 1517660 AAAGTCAAGTGTAACATCTT-T--ACTTCTGGAACTATAAATCATTATTAATAATAATAGTAGCAGTTGGTGAAGCTAATATAATATATTAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426328 90 + 6513552 AAAGTCAAGTGTAACATCTT-T--ACTTCTGGAACCATAAATCATTATTAATAATAACAGTAGCAGTTGGTCAAACTAATATAATATTTTAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206180 87 + 117903854 AAAGTCCAGTGTAACATCTG-T--AATTCCAGAACTTTAAATCATTATTAATAACAATAGTAGCAGTTGGTCAAGCTAAT---ATATTTTAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397541 87 - 31320352 AAAGTCAAGTGTAACATCTT-T--AATTCCAGAACTTTAAATCATTATTAATAACAATAGTAGCAGTTGGTCAAGCTAAT---ATATTTTAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586673 90 + 2203405 AAAGTCAAGTGTAACATCTT-T--AATTCCAGAACTTTAAATCATTATTAATAATAATAGTAGCAGTTGGTCAAGCTAATATGATATATTAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543046 90 - 14941987 AAAGTCAAGTGTAACATCTT-C--AATTCTAGAACTTTAAATCATTATTAATAACAATAGTAGCAGTTGGTCAAGCTAATATGATATTTTAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1214257 91 - 1406956 ACAGTCAAGCATAACACCTCTT--ATGTCCAGAGCCATTAATTATTATTAATAATAATAGTAGCAAATAGTCAAGCCAATATGATATTTAAAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11203275 89 - 20685099 ACAGTAAAATCTAACACCTC-T--ATTTCCAGAGCCATAAATTATTGTTGAAAATAATAGTAGCAAATA-TCAAGCTGATATCAGCTTTTGAA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 432556 89 - 2150887 AAAGTTTA-TATAGCAATTT-TTAATTTCCTGAGTCATAAATTATTATTAATGATAATAGTGGCAATTATTTAAAGTGGTAT--TGTTTAAAA i dasNov3.JH575754 I 3708 C 0 e canFam3.chr1 112268984 1216 - 122678785 I a score=66842.000000 s hg38.chr18_GL383571v1_alt 14537 4 + 198278 ATAT s panTro5.chr18 64965182 4 + 78221452 ATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087521 4 + 77229886 ATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308458 4 + 17472758 ATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347392 4 - 152096393 ATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302027 4 + 70235451 ATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993441 4 - 75711847 ATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546147 4 - 18804593 ATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162938 4 + 18905526 ATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992605 4 - 72318688 ATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326619 4 - 1517660 ATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426418 4 + 6513552 ATAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206267 4 + 117903854 ATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397628 4 - 31320352 ATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586763 4 + 2203405 ATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543136 4 - 14941987 ATAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1214348 4 - 1406956 ATAT i proCoq1.NW_012148742v1 C 0 I 4598 s otoGar3.GL873546 11203364 4 - 20685099 ATAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270200 4 - 122678785 ATAT i canFam3.chr1 I 1216 C 0 s dasNov3.JH575754 432645 4 - 2150887 ATGT i dasNov3.JH575754 C 0 C 0 a score=1002410.000000 s hg38.chr18_GL383571v1_alt 14541 105 + 198278 ACTTTTACTCATTTAGTTTGCATGCATGCCCAAGTTTAGAGATTCTACATAATCATTGTCACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGCAAAT s panTro5.chr18 64965186 105 + 78221452 ACTTTTACTCATTTAGTTTGCATGCATGCCCAAGTTTAGAGATTCTACATAATCATTGTCACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGCAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087525 105 + 77229886 ACTTTTACTCATTTAGTTTGCATGCATGCCCAAGTTTAGAGATTCTACATAATCATTGTCACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGCAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308462 105 + 17472758 ACTTTTACTCATTTAGTTTGCATGCATGCCCAAGTTTAGAGATTCTACATAATCATTGTCACT-GCTTATC-----------------------------------------------------------------------AAATTTAT-AAATTAAAAAC--AAA-----CAGGATAGCAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347396 101 - 152096393 GGTTTTACTCATTTAGTTTGCACGCATGCCCAAGTTTAGAGATTCTACATAATCATTGTCACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AA---------GATAGCAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302031 104 + 70235451 GGGTTTACTCATTTAGTTTGCATGCATGCCCAAATTTAGAGATTCTACATAATCAATGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGC-AAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993445 104 - 75711847 GGGTTTACTCATTTAGTTTGCATGCATGCCCAAATTTAGAGATTCTACATAATCAATGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGC-AAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546151 104 - 18804593 GGGTTTACTCATTTAGTTTGCATGCATGCCCAAATTTAGAGATTCTACATAATCAATGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGC-AAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13162942 104 + 18905526 GGGTTTACTCATTTAGTTTGCATGCATGCCCAAATTTAGAGATTCTACATAATCAATGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGC-AAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992609 105 - 72318688 GGTGTTACTCATTTAGTTTGCATGCATGCCCAAGTTTAGAGATTCTACGTAATCATTGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGCAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326623 104 - 1517660 GGGTTTACTCATTTAGTTTGCATGCATGCCCAAATTTAGAGATTCTACATAATCAATGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGC-AAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426422 105 + 6513552 GGTTTTACTCATTTAGTTTGCATGCATGCCTAAGTTTAGAGATTCTACATAATCATTGTCACA-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTAAAAAC--AAA-----CAGGATAGCAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206271 101 + 117903854 GCTTTTACTCATTTAGTTTGCATTCACATCCAAGCCTAGAGATTCCACATAATCATTGCTACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATAAAAAAA-----------AGAATAGCAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397632 103 - 31320352 GCTTTTACTCATTTAGTTTGCATTCACATCCAAGCATAGAGATTCTACATAACCATTGCTACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATAAAAAAAAAAAC-----CAGAATAGC---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586767 105 + 2203405 GCTTTTACTCATTTAGTTTGCATTCACGTCCAAGCATAGAGATTCTACATAATCATTGCTACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATTTAAAAA--AAA-----CAGAATAGCAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543140 107 - 14941987 GCTTTTACTCATTTAGTTTGCATTCATGTCCAAGCATAGAGATTCTACATAATCATTGCTACT-GCTTATC-----------------------------------------------------------------------AAAGTTAT-AAATAAAAAAAAAAAA-----CAGAATAGCAAAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11203368 177 - 20685099 TGTGTATCTGATTTGATATACATTCACATCTAAGTTTAGAGACTCTAAATAATAATTGTTACT-ATTTATTTATTAAGCAAGTTATTAAGCTTAATAGTAGCCTAAGCTTAAGCTTAATTAAATAAGATACTATTTATTAAGCAAGTTATCCAATTTCAAAA--AAC-----CAAAATAGGAAAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270204 99 - 122678785 GCCTTATCTCATTTGTTTTACATGAATGTCTAAGTTTAGATAATCTAAAAAATAATTAATACCGGGGCATT-----------------------------------------------------------------------AGAATTTT----TTGAGTAC-----------AGGATAGCAAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 432649 108 - 2150887 GTATTACCTCATTTGGTTTGCACAAATGTGAGAAGTTAGAG--TCTAGATAATAATTACTACC-ATTGACA-----------------------------------------------------------------------CATTTTTC-AAAAAAAAAAA--AAAATTAGCAGGATAGTAGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1214352 4598 - 1406956 I a score=1249121.000000 s hg38.chr18_GL383571v1_alt 14646 101 + 198278 AAGTTG-----TGTATTTC----TGTTTCCTCACTCCTCATCAGTATTTTTATACCATTCAAAGAATATGGTATTATTTTCT-TAATCTAAATATTG-CTTGTGTGTTTTCC s panTro5.chr18 64965291 101 + 78221452 AAGTGG-----TGTATTTC----TGTTTCCTCACTCCTCATCAGTATTTTTATACCATTCAAAGAGTATGGTATTATTTTCT-TAATCTAAATATTG-CTTGTGTGTTTTCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087630 101 + 77229886 AAGTGG-----TGTATTTC----TGTTTCCTCACTCCTCATCAGTATTTTTATACCATTCAAAGAGTATGGTATTATTTTCT-TAATCTAAATATTG-CTTGTGTGTTTTCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308567 101 + 17472758 AAGTTG-----TGTATTTC----TGTTTCCTCACTCCTCATCAGTATTTTTATACCATTCGAAGAATATGGTATTATTTTCT-TAATCTAAATATTG-CTTGTGTGTTTTCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347497 101 - 152096393 AAGTTG-----TATATTTC----TGTTTCCTCACTCCTCATCAGTATTTTTATACCATTCAAAGAATATGGTATTATCTTAT-TAATCTAAATATTG-CTTGTGTGTTTTCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302135 101 + 70235451 AAGTTG-----TATATTTC----TGTTTCCTCACACCTCATCAGCATTTTCATACCATTCAAAGAATATGGTATTATTTTAT-TAATATAAATATTG-CTTGTGTGTTTTCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993549 101 - 75711847 AAGTTG-----TATATTTC----TGTTTCCTCACACCTCATCAGCATTTTCATACCATTCAAAGAATATGGTATTATTTTAT-TAATATAAATATTG-CTTGTGTGTTTTCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546255 101 - 18804593 AAGTTG-----TATATTTC----TGTTTCCTCACACCTCATCAGCATTTTCATACCATTCAAAGAATATGGTATTATTTTAT-TAACATAAATATTG-CTTGTGTGTTTTCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163046 101 + 18905526 AAGTTG-----TATATTTC----TGTTTCCTCACACCTCATCAGCATTTTCATACCACTCAAAGAATATGGTATTATTTTAT-TAATATAAATATTG-CTTGTGTGTTTTCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992714 101 - 72318688 AAGTTG-----TATATTTC----TGTTTCCTCACTCCTCATCAGCATTTTCATACCATTCAAAGAACATGATATTATTTTAT-TAATATAAATATTG-CTTGTGTGTTTTCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326727 101 - 1517660 AAATTG-----TATATTTC----TGTTTCCTCACACCTCATCAGCATTTTCATACCATTCAAAGAATATGGTATTATTTTAT-TAATATAAATATTG-CTTGTGTGTTTTCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426527 101 + 6513552 AAGTTG-----TATATTTC----TGTTTCCTCACTCCTCATCAACATTTTCATACCATTCAAAGAATATGATATTATTTTAT-TCATATAAATGTTG-CTTGTGTGTTTTCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206372 101 + 117903854 AATTTA-----TATATTTC----CGTGTCCTCACTCCTTATCAGTATTTTTATACCATTCAAAGAATATGGTATTTTTTTAT-TAATCTAAATATTA-CTCATATGTTTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397735 90 - 31320352 ----------------TTC----TGTGTCCTCACTCCTCATCAGTATTTTTATACCATTCGAAGAATATGATATTATTTTAT-TAATCTAAATATTA-CTTGTATGTTTTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586872 101 + 2203405 AAGTTA-----TATATTTC----TGTATCCTCACTCCTCATCAGTGTTTTTATAACATTCAAAGAATATGATATTATTTTAT-TAATCTAAATATTA-CTCGTATGTTTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543247 101 - 14941987 AAGTTA-----TATATTTC----TGTGTCCTCAATCCTCATCAGTATTTTTATACCATTCAAAGAATATGATATTATTTTAT-TAATCTAAATATTA-CTCATATGTTTTCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1218950 101 - 1406956 AAGCTG-----TATATTTA----TATTTCCCCAATCCTCACTAGTTTTTTTAAATCATTCAAGGAACATGATATTAATTTAT-TAATCTAAATATTG-TTTATATGTTTTCC i proCoq1.NW_012148742v1 I 4598 I 89 s otoGar3.GL873546 11203545 95 - 20685099 AAGCTG-----TCTATTTA---TTATTTCTACAGTCCTTACTA---TTTTTAAATCATTCAAGGG----Gatattattttat-taatataaatatta-tttCTATGACTTCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270303 104 - 122678785 AAGTTG-----TATATTTTTTGTTATTTCCATACTTCTCATAAGTTTTTTTA-ATCATTC-AGGAATATGATATTATTTTTTAAAATCTAAATATTG-TTTGTGTGTTTTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 432757 105 - 2150887 AAATTGACATTGAGATTTA----TATATTCCCATGCTTTTTAAGTATTTT--AAACATTTAGGGattataatattattttat-aaatataaatattGTTTTGTATCTTTTCC i dasNov3.JH575754 C 0 C 0 a score=803343.000000 s hg38.chr18_GL383571v1_alt 14747 87 + 198278 ----AGGAGTAAAGAA---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAACACATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC s panTro5.chr18 64965392 87 + 78221452 ----AGGAATAAAGAA---TAGATTTTGTA-TTTTT---------TTTCAGGGATCGTGAAAACACATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087731 87 + 77229886 ----AGGAATAAAGAA---TAGATTTTGTA-TTTTT---------TTTCAGGGATCGTGAAAACACATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308668 86 + 17472758 ----AGGAATAAAGAA---TAGATTTTGTA--TTTT---------TTTCAGGGATACTGAAAACACATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347598 87 - 152096393 ----AGGAATAAAGAG---TAGATGTTGTA-TTTTT---------TTTCAGGGATCCTTAAAATGCATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302236 87 + 70235451 ----AGGAATAAAGAG---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993650 87 - 75711847 ----AGGAATAAAGAG---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546356 87 - 18804593 ----AGGAATAAAGAG---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163147 87 + 18905526 ----AGGAATAAAGAG---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GTGTATGGGGAAGGT-TGTCTTCTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992815 88 - 72318688 ----AGCAATAAAGAA---TAGATTTTGTATTTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GCCTATGGGGAAAGT-TGTCTTCTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326828 87 - 1517660 ----AGGAATAAAGAG---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GTCTATGGGGAAGGT-TGTCTTCTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426628 87 + 6513552 ----AGGAATAAAGAG---TAGATTTTGTA-TTTTT---------TTTCAGGGATCCTGAAAAGGCATTGAAATAGAAA-GTCTATGGGGAAAGT-TGTCTTCTGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206473 80 + 117903854 ----AGAAAT--AGAG---TAGATT------TTATT---------TTTCAGGGATCCTGAAAAGGTTTTGAAATAGAAA-GTCTATGAGGTAAGT-TGTCTTCTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397825 80 - 31320352 ----AGGGAG--AGAG---TAGATT------TTATT---------TTTCAGGGATCCTGAAAAGGTATTGAAATACAAA-GTCTGTGAGGTAAGT-TGTCTTGGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1586973 80 + 2203405 ----AGGGAG--AGAG---TAGATT------TTATT---------TTTCAGGGATCCTGAAAAGGTATTGAAATAGAAA-GTCTATGAGGTAAGT-TGTCTTCTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543348 80 - 14941987 ----AGGGAT--AGAG---TAGATT------TTATT---------TTTCAGGGATCCTGAAAAGGTATTGAAATAGAAA-ATCTACGAGGTAAGT-TGTCTTCTGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11203640 98 - 20685099 ----AGAGATAAAAAAAATTAGAGTTTCAA-TTTTTTTTTCAGTGTTTTAGAGATCTTGAAAAGGCAGCAAAATGGGAT-GACTGCAGGGAAGGTATGTCTGGC-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270407 70 - 122678785 ----AGGGATAAAGGG---AAATTT---CA-ATATT-----------------------GAAAGGCATTGAAATAAAAAGGTCTACGGGGAAAGT-T-TCTTTTGC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 432862 67 - 2150887 ACGGATGAATAAAAGG---AAGTTT---CA-ATCTT---------TTCCTGGGGTTTT----------TGAGATACAAG-CTTTATG-----ATT-TGAC------ i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1219051 89 - 1406956 I a score=701189.000000 s hg38.chr18_GL383571v1_alt 14834 55 + 198278 CTTCAAAATGTGCCTAGGCAAGTCTGTGTTGGAAGCTAGGTTATATTCAAGGACA s panTro5.chr18 64965479 55 + 78221452 CTTCAAAATGTGCCTAGGCAAGTCTGTGTTGGAAGCTAGGTTATATTCAAGGACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087818 55 + 77229886 CTTCAAAATGTGCCTAGGCAAGTCTGTGTTGGAAGCTAGGTTATATTCAAGGACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308754 55 + 17472758 CTTCAAAATGTGCCTAGGCAAGTCTGTGTTGGAGGCTAGGTTATATTCAAGGACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347685 55 - 152096393 CTTCAAAATGTGCTTAGGCAAGTCTGTGCTGGAAGCTAGGTTATATTCAAGGACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302323 55 + 70235451 CTTCAAAATGTGCCTAGGCAAGTCTGCGTTGGAAGCTAGGCTGTGTTCAAGGACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993737 55 - 75711847 CTTCAAAATGTGCCTAGGCAAGTCTGCGTTGGAAGCTAGGCTGTGTTCAAGGACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546443 55 - 18804593 CTTCAAAATGTGCCTAGGCAAGTCTGCGTTGGAAGCTAGGCTGTGTTCAAGGACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163234 55 + 18905526 CTTCAAAATGTGCCTAGGCAAGTCTGCGTTGGAAGCTAGGCTGTGTTCAAGGACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992903 55 - 72318688 CTTCAAAATGTGCCCAGGCAAGTCTGTGTTGGAAGCTAGGCTGTGTTCAAGGACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326915 55 - 1517660 CTTCAAAATGTGTCTAGGCAAGTCTGCGTTGGAAGCTAGGCTGTGTTCAAGGACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426715 55 + 6513552 CTTCAAAATGTGCCTAGGCAAGTCTGCATTGGAAGCTAGGCTGTGTTCAAGGACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206553 54 + 117903854 CTTCAATATGTGCCTAGGCAAGTCTGCATTGGAAGCTAGGTTACATT-AAGGACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397905 54 - 31320352 CTTCAAAATGTGCCTAGGCAAGTCTGCATTGGAAGCTAGGTTACATG-AAGGACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1587053 54 + 2203405 CTTCAAAACGTGCCTAGGCAAGTCTGCATTGGAAGCTAGGTTACATT-AAGGACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543428 54 - 14941987 CTTCAAAATGTGCCTAGGCAAGTCTGCATTGGAAGCTAGGTTACATT-AAGGACA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1219140 55 - 1406956 CTTCAAAATGTGCCTGGGAAAGTCTGTACTGGAAGCAAGATTACATTCAAGGACA i proCoq1.NW_012148742v1 I 89 I 62 s otoGar3.GL873546 11203738 55 - 20685099 TTTCAAAATAAGCCTGGAAAAGTCTGTACTGGAAGCTCAGTTACCTTCAAGAACA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270477 51 - 122678785 TTTTACAGAGTGCTGG----AATCTGTGCTGGAAGCAGGATTCTATTCAAGGATA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 432929 54 - 2150887 GCCCAGAATGTTTCCACTCAAGTCTGTCCTGGCAGAC-GATTACATTCCGGGACG i dasNov3.JH575754 C 0 C 0 a score=607375.000000 s hg38.chr18_GL383571v1_alt 14889 58 + 198278 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTCCTCACACAGTC s panTro5.chr18 64965534 58 + 78221452 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTCCTCACACAGTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087873 58 + 77229886 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTCCTCACACAGTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308809 58 + 17472758 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTCCTCACACAGTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347740 58 - 152096393 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAATTAGATGTTCTCACACAGTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302378 58 + 70235451 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTTCTCACACAGTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993792 58 - 75711847 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTTCTCACACAGTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546498 58 - 18804593 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTTCTCACACAGTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163289 58 + 18905526 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTTCTCACACAGTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59992958 58 - 72318688 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTTCTCACACAGTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 326970 58 - 1517660 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGCCAAGTTAGATGTTCTCACACAGTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426770 58 + 6513552 CAGCATCACCTGGAGTTGCTTTGA-----TGTCAGAGGTCAAGTTAGATGTTCTCACACAGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206607 63 + 117903854 TGGAATCACCTGGAGTTGCTTCGATTCAGTGTCAGGAGCCAGGTTCAATGTTCTCACAGAGTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19397959 63 - 31320352 TGGAATCACCTGGAGTTTTTTTGATTCAGTGTTAGGAGCCAGGTTTAATGTTCTCACAGAGTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1587107 63 + 2203405 TGGAATCACCTGGAGATGCTTTGATTCAGTGTCAGGAGCCAAGTTTAATGTTCTCACAGAGTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543482 63 - 14941987 TGGAATCACGTGGAGTTGCTTCGATTCAGTGTCAGGAGCCAAGTTTAATGTTCTCACAGAGTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11203793 62 - 20685099 CTATGTCCCCAGGAGCCTCTTTAAATCACTGTCAGGAAGTGAGTTT-ATGTTCTCTTGAAGCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270528 55 - 122678785 ---CTTTACCTGA-----CTATGAATATGTGTCAGGAGCTAAACTTGATGTACTCTCAAAGCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 432983 61 - 2150887 CTGCAGCACCTGGAGGCTCTCTGAATCGGTGCCGGGGATTAAGCTTGACATTCTCTCAGAG-- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1219195 62 - 1406956 I a score=4666467.000000 s hg38.chr18_GL383571v1_alt 14947 390 + 198278 GTGAGTAGCCTGTGATCACCAGATCACAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CT-----------------------------TTT--GTTTGAGGATTCGTGACTGCTCTAAAGGGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATACGGTTACCAGCTAATCTTAC-ATAGGGACTCAGAAGATAAATAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTCGGTTTTGGTGGTT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGCAAAATAACTTC----AAT-AAA---AAATTG s panTro5.chr18 64965592 385 + 78221452 GTGAGTAGCCTGTGATCACCAGATCACAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CT-----------------------------TTT--GTTTGAGGATTCGTGACTGCTCTAAAGGGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATATCGTTACTGGCTAATCTTAC-ATAGGGACTCAGAAGATAAATAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTGTG---TAATAAGAAAC--TGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGTT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGCAAAATAACTTC----AAT-AAA---AAATTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64087931 385 + 77229886 GTGAGTAGCCTGTGATCACCAGATCACAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CT-----------------------------TTT--GTTTGAGGATTCGTGACTGCTCTAAAGGGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTATGTGATTCACTGAGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATATCGTTACTGGCTAATCTTAC-ATAGGGACTCAGAAGATAAATAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTGTG---TAATAAGAAAC--TGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGTT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGCAAAATAACTTC----AAT-AAA---AAATTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5308867 390 + 17472758 ATGAGTAGCCTGTGATCACCAGATCACAGATCTTCCAAATGGATTTGGGGAG-AAATTTTT---CT-----------------------------TTT--GTTTGAGGATTCGTGACTGCTCTAAAGGGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATATGGTTACCGGCTAATCTTAC-ATAGGGACTCAGAAGATAAATAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCATATCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGTT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGCAAAATAACTTC----AAT-AAA---AAATTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139347798 390 - 152096393 GTGAATAGCCTGTGATCACCAGATCACAGATCTTCCAGATGGATTTGGGGAG-TAATTTTT---CT-----------------------------TTT--GTTTGAGGATTCGTGACTGCTCTAAAGGGAAAATTTTAAGGTATAAACTGGGGAGCTTATACCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATATGCTTACCAGCTAATCTTAC-ATAGGGACTCAGAAGATAAGTAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAACAAGAAACAAtgctttgttttcttttgcttgttttggttttgATGGCT-----------------------------AAT--GTTTGCTTG-----AGAATC-TGTTGTTGGAAAATAACTTC----AAT-AAA---AAATTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302436 380 + 70235451 GTGAATAGCCTGTG-----------ATAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CA-----------------------------TTT--GTCTGAGGATTTGTGACTGCTCTAAAGTGAACATTTTAGGGTATAAACTGGGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAGAATGGTTACCGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGCT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGGAAAACAACTTC----AATAAAA---AAATTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62993850 380 - 75711847 GTGAATAGCCTGTG-----------ATAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CA-----------------------------TTT--GTCTGAGGATTTGTGACTGCTCTAAGGTGAACATTTTAGGGTATAAACTGGGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAGAATGGTTACCGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGCT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGGAAAACAACTTC----AATAAAA---AAATTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546556 380 - 18804593 GTGAATAGCCTGTG-----------ATAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CA-----------------------------TTT--GTCTGAGGATTTGTGACTGCTCTAAAGTGAACATTTTAGGGTATAAACTGGGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAGAATGGTTACCGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGCT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGAAAAACAACTTC----AATAAAA---AAATTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163347 380 + 18905526 GTGAATAGCCTGTG-----------ATAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CA-----------------------------TTT--GTCTGAGGATTTGTGACTGCTCTAAAGTGAAAATTTTAGGGTATAAACTGGGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAGTATGGTTACCGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGCT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGGAAAACGACTTC----AATAAAA---AAATTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59993016 390 - 72318688 ATAAATAGCCTGTGATAACCAGATCATAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CA-----------------------------TTT--GTCTGAGGATTTGTGACTGCTCTAAAGTGAAATTTTTAGGGTATAAACTGAGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATATGGTTACCGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGCT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTGGGAAAACAACTTC----AAT-AAA---AAATTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 327028 380 - 1517660 GTGAATAGCCTGTG-----------ATAGATCTTCCAAATGGATTTGGGGAG-TAATTTTT---CA-----------------------------TTT--GTCTGAGGATTTGTGACTGCTGTAAAGTGAAAATTTTAGGGTATAAACTGGGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAGTATGGTTACCGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGCT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGGAAAACAACTTC----AATAAAA---AAATTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3426828 390 + 6513552 ATGAATAGCCTGTGATCACCAGATCATAGATCTTCCAAATGGATTTGGGGAG-CAATTTTT---CT-----------------------------TTT--GTCTGAGGATTTGTGACTGCTCTAAAGTGAAAATTTTAGAGTATAAAGTGGGGAGTTTATTCCTATGTGATTCACTGTGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATATGGTTACTGGCTAATCTTAC-ACAGGGACTCAGAAGATAAATAATGAACCATCTAGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAATAAGAAACAATGCTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGGTT-----------------------------AAT--GTTTTCTTG-----AGAATC-TGTTGTTGGAAAACAACTTC----AAT-AAA---AAATTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105206670 374 + 117903854 GTGAATAGCCTGTA--------ATCACAGATCTTCCAAATGGATTTGGGAAG-TATTCTTT---CT-----------------------------TTT--CTCTGAGGATTTGTGACTGGTCTAAAGTGAAAATTTTAGGGTATAAACTGAGGAGCTTATACCTGTGTGATTCACAATGAAGAATCAGGCTAGACC----AAAACCTTTAAATA-TTTTTGCA---CTCAATGTGGTTACTGGCTAATCTTAA-ATAGGGACTCAGAATA----TAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATAATTTCTATGTAATAACAAGAAACAATGGTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGACT-----------------------------------TTTTTTTG-----ATAATC-TGTTGTTAGAAAACAGTTTC----AGT-AAA---AAATTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19398022 380 - 31320352 GTGAATAGCCTGTA--------ATCACAGATCTTCCAAACGGATTTGGGAAG-TATCCTTT---CT-----------------------------TTT--CTCTGAGGATTTGTGACTGCTCTAAAGTGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTGTGTGATTCACAATGAAGAATCAGGCTAGACC----AAAATCTTTCATTA-TTTTTGCA---CTCAATGTGGTTACTGGCTAATCTTAA-ATAGGGACTCAGAATA----TAGTGAATCATCTGGTGGCAGACATAAATGCTTTTAATGGAAATATCATTTCTATGTAATAACAAAAAACAATGGTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGACT-----------------------------GA----TTTTTTTATATATATAATC-TATTGTTAGAAAACAACTTC----AG--GAA---AAATTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1587170 375 + 2203405 ATGAATAGCCTGTA--------ATCACAGATCTTCCAAATGGATTTGGGAAG-TATTCTTT---CT-----------------------------TTT--CTCTGAGGATTTGTGACTGCTCTAAACTGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTGTGTGATTCACAATGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---TTCAATGTGGTTACTGGCTAATCTTAA-ATAGGGACTCAGAATA----TAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCCTTTCTATGTAATAACAAGAAACAATGGTTTGTTTTCTTTTGCTTGTTTTGGTTTTGGTGACT-----------------------------T-----TTTTTTTG-----ATACTC-TGTTGTTAGAAAACAACTTC----AGT-AAA---AAATTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543545 373 - 14941987 GTGAATAGCCTGTA--------ATCACAGATCTTCCAAATGGATTTGGGAAG-TATTCTTT---CT-----------------------------TTT--CTCTGAGGATTTGTGACTGCTCTAAAGTGAAAATTTTAGGGTATAAACTGGGGAGCTTATACCTGTGTGATTCACAATGAAGAATCAGGCTAGACC----AAAACCTTTCATTA-TTTTTGCA---CTCAATGTGGTTACTGCCTAATCTTAA-ATAGGGACTCAGAATA----TAATGAACCATCTGGTGGCAGACATAAATGTTTTTAATGGAAATATCATTTCTATGTAATAACAGGAAACAATGGTTTGTTTTCTTTAGCTTGTTTTGGTTTTGGTGAC------------------------------------TTTTTTTG-----ATAATC-TGTTGTTAGAAAACAACTTC----AGT-AAA---AAATTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1219257 415 - 1406956 GTGAATAACCTCTGATTACCAGATCACAGATCTTCCAAATTGATCTGGGAAG-TGTTTATT---CT-----------------------------TTT--GTCTGAGGATTCTTGGCTGCTCTAGAGTGAAAACTTTAGGGTATAAACTGAGGAGC-TATACCCATGTGGTTCACTATGAAGAATCAAGCTGGACC----AAAAACATTCATTA-TTTGTGCA---CTCAAAGTGGTTCCTAGCTAATATTAC-ACAGACACTCAGCATG----TAATGAAGAATCTGGTTGTAGACATAAATGCTTTTAATGGAAATATCATTTCTATGTAACAATAAGAAATGCTGCTTTATTTCCTTTTGCTCATTTTGGTTTTTGTGACTTTAAACTAGAATATACTCAATGTCCCT--AAT--ATTTTTTAG-----AGAATC-TGTTGTTGGAAAACAGCTTT----AAT-AAAAATAAAATG i proCoq1.NW_012148742v1 I 62 C 0 s otoGar3.GL873546 11203855 417 - 20685099 GTGGATAGCCTGTGATTACCAGATCACAGATCTTCCACATTAATTTGGAAAGTTGTTTTTT---TT-----------------------------TTTCAGTCTGAGGATTCTTAGCTACTCTAGAGTGAAAATTTTAGGGTATAAAATGAGAAGC-TAT-CCCATATGAGTCACTATGAAGAATCAGGGTGAACC----AAAAACATTCACTG-TTTTTGCA---CTCAAAGGGCTTACTGGGTAATGTGGC-ATAAAGACTCAGCATG----CAGTGGGAAACCTTATGTTAGACATAAATGCTTTTGAGGGAAATAGCATTTCTATACAGTAATAAGAAATACTGCTTTATTTCCTTTTGTGTGTTTTGAGTTTTGAGTTTTTAAATTAGAATAT-CTCACTGTGTCT--AAT--ATTTTTTAG-----ATAATCTTTTTGTTGGAAAATAGCTCT----AAT-AAAAACAAAATG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112270583 436 - 122678785 GTGAATAATTTCTGATTACCAGATTGCAGATCTTCCAAATTGATATGAGGTG-gtgtctgt---gtgtgtgtgtgcgtgtgtgcgtgcgtgtgtgtgt--gtgtgtgtATTCTTAGCTGTTACAGAATGAAAATTTTAGTGTATAAA--------------CCCATGTGATTCACCTTGAGGAATCAAAGTTGGCC----AAAAAGTTTTATTATTTTTTGCA---TTCAAATAGGTTACTGGCTAATATTAAGACAGAGACTCAAAATC----TAATGAAGGATTTGTTGGTAGAAATAAACGTTTTTAATGGATATACTGTTTCTATTGAAGAAGTAATAAAAATATTTTATTTTGTTTCATTTTTCTTGGTTCCTGCGGCTTTAAACTAGAATACACACAATATCCCTAACAT--TTTTTATTG-----AGAATT-AGCTGTTGGAAGATATTTTTGAAAAAT-CAA---AACTTG i canFam3.chr1 C 0 I 492 s dasNov3.JH575754 433044 382 - 2150887 --------------------------CAGATCT--CAAACTAATTTTTGGAG-GTTTTTTTTCCCT-----------------------------TTT--GTCTGAGGAATTCCAGCTACTCCA----GACAATTTTGGGGCATACACTCAAGAGG-TATGCCTATGTGATTCAATATGAAATATCAAACTGAACCAAAAAAAAACTAATATTT-TTTTCTTAATTCTCAAAGTAGCTACTAGTTAAACTTAC-ATAGGGACTCAGAAT-----TGAGGAAGGATCTGGTGGTAAACATAAAAGCTTTTAATGGAGCTG----TTTTAT---ATAATAAGAAACAATGCTTTATTCCCTTTTGTTTATTTAGCTTCTAGCAGCTTTAAACTAGAATACACACAGGATG-----AATAAAATCTTTTG-----AGAATC-TGCTGTTAGAAAAGAGCTTT----AAAAAAT---AAATTG i dasNov3.JH575754 C 0 C 0 a score=640930.000000 s hg38.chr18_GL383571v1_alt 15337 66 + 198278 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTAA-AGACTACACTTAGACAT---TGGGGGGCAATAATT s panTro5.chr18 64965977 66 + 78221452 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTAA-AGACTACACTTAGACAT---TGGGGGGCAATAATT i panTro5.chr18 C 0 I 1794 s panPan2.chr18 64088316 66 + 77229886 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTAA-AGACTACACTTAGACAT---TGGGGGGCAATAATT i panPan2.chr18 C 0 I 1919 s gorGor5.CYUI01014964v1 5309257 65 + 17472758 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTAA-AGACTACACTTAGACAT---T-GGGGGCAATAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139348188 66 - 152096393 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTAA-AGACTACACTTAGACAT---TGGGGGACAATAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302816 66 + 70235451 TGTACCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTGCACTTAGACAT---TGGGGGGCAATTACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62994230 66 - 75711847 TGTACCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTGCACTTAGACAT---TGGGGGGCAATTACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13546936 66 - 18804593 TGTACCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTGCACTTAGACAT---TGGGGGGCAATTACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163727 66 + 18905526 TGTACCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTGCACTTAGACAT---TGGGGGGCAATTATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59993406 66 - 72318688 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTACACTTAGACAT---TGGGGGGCAATTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 327408 66 - 1517660 TGTACCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTGCACTTAGACAT---TGGGGGGCAATTATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3427218 69 + 6513552 TGTGCCTAAGT-------------ATAATGAGATTATTCCAAAGTGA-AGACTACACTTAGACATGGGGGGGGGGCAATTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105207044 65 + 117903854 TGTACATATGT-------------ATAATGAGATTATTCTAGAGTTA-ACAATACATTTAGATGT---TGGGGTGCAGTTTT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19398402 65 - 31320352 TGTGCATATGT-------------ATAATGAGATGATTCTAGAGTAA-CCAATACACCTAGATTT---TGGGGTGCAATTTT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1587545 64 + 2203405 TGTGCATATGT-------------ATAATGAGATTATTCTAGAGTAA-ACAATACA-CTAGATTT---TGGGGTGCAATTTT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543918 65 - 14941987 TGTGCATATGT-------------ATAATGAGATTATTCTAGAGTAA-ACAATACACTTAGATTT---TGGGGTGCAATTTT- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1219672 78 - 1406956 TGTGCCTAATTTTCACACAA-ACCATAATGAAATCATACCAAAATAA-AGAATATACTTGCACCT---TGTAGGGCAATAATT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11204272 66 - 20685099 TGTATGTAATTTTCACACAA-ACAATAATGAGATTATTCCAAAATAA-AGAATACACTT---------------ACAATAATT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112271511 76 - 122678785 tGTGCCCATTT-TCACAAGA-GTAATAATGAG-TTTTTACAAAGTGA-GAAACATACTTATATTT---TGAGGGGTTATTAAT i canFam3.chr1 I 492 I 1 s dasNov3.JH575754 433426 80 - 2150887 TGTGCCTAATTTTCAGAAAAGGGGATAATGGGATTTTTCCAAAGTAAGAGATGATTCTCACACCT---TTTAGATCATTAATT i dasNov3.JH575754 C 0 C 0 a score=1377159.000000 s hg38.chr18_GL383571v1_alt 15403 108 + 198278 AGAAAGTGGAACATAGAAAACTATAAACATTTTCATGTAGAACTGTAAGTTTCTCTCGAAACTGGATTTGAATATAAGTAAGCCAAATATAGTGAATGTTTTACTGCA s panTro5.chr18 64967837 108 + 78221452 AGAAAGTGGAACATAGAAAACTATAAACATTTTCATGTAGAACTGTAAGTTTCTCTCGAAACTGGATTTGAATATAAGTAAGCCAAATATAATGAATGTTTTACTGCA i panTro5.chr18 I 1794 C 0 s panPan2.chr18 64090301 108 + 77229886 AGAAAGTGGAACATAGAAAACTATAAACATTTTCATGTAGAACTGTAAGTTTCTCTCGAAACTGGATTTGAATATAAGTAAGCCAAATATAATGAATGTTTTACTGCA i panPan2.chr18 I 1919 C 0 s gorGor5.CYUI01014964v1 5309322 108 + 17472758 AGAAAGTGGAACATAGAAAACTATAAACATTTTCATGTAGAACTGTAAGTTTCTCTCGAAATTGGATTTGAATATAAGTAAGCCAAATATAACGAATGTTTTACTGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139348254 108 - 152096393 AGAAAGTAGAACACAGAAAACTATAAACATTTTAATGTAGAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGCCAAATATAATGAATGTTTTACTGCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302882 108 + 70235451 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62994296 108 - 75711847 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13547002 108 - 18804593 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163793 108 + 18905526 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59993472 108 - 72318688 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 327474 108 - 1517660 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3427287 108 + 6513552 AGAAAGCAGAACAGAGAAAACTATAAACATTGTCATGTACAACTGTAAGTTTCTCTTGAAACTGGATTTGAATATAAGTAAGTGAAATATAATGAATGTTTTACTGCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105207109 108 + 117903854 AGAAAGTAGAATGTAGAAAACTATAAACATTGTCATGTAAAAATGTAAGTTTCTCTTGAAACTGGATTTGAACATATGTAAGCCAAATATAATGTATATTTTAGAGCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19398467 108 - 31320352 AGAAAGTAGAATGTAGAAAACTATAAATATTGTCATGTAGAACTGTAAGTTTCTCTTGAAACTGGATTTGAACATGTGTAAGCCAAATATAATGTATATTTTAGAGCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1587609 108 + 2203405 AGAAAGTAGAATGTAGAACACTATAAACATTGTCATGTAGAACTGTAAGTTTCTCTTGAAACTGGATTTGAACATATGTAAGCCAAATATAATGTATATTTTAGAGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3543983 108 - 14941987 AGAAAGTAGAATGTAGAAAACTATAAACATTGTCATGTAGAACTGTAAGTTTCTCTTGAAACGGGATTTGAACATATGTAAGCCAAATATAATGTATATTTTAGAGCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1219750 108 - 1406956 AGAAATTAGAACCTAGAAAACTATAAACATTGTTATGTAGAACTGTAAGTTTCTCTTGAAATTGGATCTGAACATAAGTAAACCAAATATAGTAGATGTTTTAATGCA i proCoq1.NW_012148742v1 C 0 T 4219 s otoGar3.GL873546 11204338 107 - 20685099 AGAAACAAGAACCTAAAAAATTATCAACATTGTTACGTAGAACTGCCAGCTTCTCTTGAATTTGGATTTGAATGTAAGTAAATAAAATATAATAGATG-TTTAATGGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112271588 102 - 122678785 GGAAATTGGGACCTCAAATACTATA-----TGTTACGTAGAAATCTGAATTGCTCTTGAAATGCAATCTAAACATAAATAA-CCAAAAACAATAGATGTTTTAATAAA i canFam3.chr1 I 1 I 1 s dasNov3.JH575754 433506 92 - 2150887 ---------------AGAAACTGTAGACA-TGTTATATAGAGTTTTAAGTTTCTCTTGAAATGTGCTTTTTTCCTATGTAAACCAAAAATAATAGATGTTCTAATGAA i dasNov3.JH575754 C 0 C 0 a score=4792607.000000 s hg38.chr18_GL383571v1_alt 15511 461 + 198278 TGATGCTACCACCAGCAAGATTT-AGAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCC-TAAGAGAATAAC--A---AAACA--------------------------------------------------CA----CACATAAAAA------------TGTACAAACAAAAACCTAATACTATCTTGTC-----TCTGTCATAGGAA----------------------------Cacatgcacacacacttttaaatagtatataagtaaatgcataaatgcatacatagacatatgaatacataatacctacataaatacatatacatacatttatac-tacataacataGGTAATTCACAAAAAAGAA-TAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATAAATTAAGCAAATACACAC--------------------AAACACACACAC-CAGAGGAAGAGATATATAAGTCAAATTGGCAGTGTAGGACCACAGCTATAATTGGGACACGCTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAGATTTCA s panTro5.chr18 64967945 463 + 78221452 TGACGCTACCACCAGCAAGATTT-AAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAAAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAACA--------------------------------------------------CA----CACATAAAAA------------TGTACAAACAAAATCCTAATACTATCTTGTC-----TCTGTCGTAGGAA----------------------------CACACGCACACACACTTTTAAATAGtatataagtaaatgcataaatgcatacatagacatatgaatacataatacctacataaatacatataaatacatgtatacctacataacataGGTAATTCACGAAAAAGAAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATAAATTAAGCAGATACACAC--------------------AAACACACACAC-CAGAGGAAGAGATATATAAGTCAAATTGGCAGTGTAGGACCACAGCTATAATTGGGACACGCTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAGATTTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64090409 463 + 77229886 TGACGCTACCACCAGCAAGATTT-AAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAAAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAACA--------------------------------------------------CA----CACATAAAAA------------TGTACAAACAAAATCCTAATACTATCTTGTC-----TCTGTCGTAGGAA----------------------------CACACGCACACACACTTTTAAATAGtatataagtaaatgcataaatgcatacatagacatatgaatacataatacctacataaatacatataaatacatgtatacctacataacataGGTAATTCACGAAAAAGAAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATAAATTAAGCAAATACACAC--------------------AAACACACACAC-CAGAGGAAGAGATATATAAGTCAAATTGGCAGTGTAGGACCACAGCTATAATTGGGACACGCTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAGATTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5309430 461 + 17472758 TGACGCTACCACCAGCAAGACTT-AAAAACTGCTGCATTTAATTATTGCTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCC--AAGAGAATAAC--A---AAACA--------------------------------------------------CA----CACATAAAAA------------TGTACAAACAAAAACCTAATACTATCTTGTC-----TCTGTCATAGGAA----------------------------CACACGCACACACACTTTTAAATAGtatataagtaaatgcataaatgcatacatagacatatgaatacataatacctacataaatacatataaatacatttatacctacataacataGGTAATTCACGAAAAAGAAATAAAAACTGATTTTGATTCTTATTGTC-TATA-AAATAAATTAAGCAAATACACAC--------------------AAACACACACAC-CAGAGGAAGAGATATATAAGTCAAATTGGCAGTGTAGGACCACAGCTATAATTGGGACACACTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAGATTTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139348362 493 - 152096393 TGACACTACCACCAGCAAGATTT-AAAAACTACTGCATTTAATTACTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCC-GAAAAGAATAAC--A---AAacacacacgtgccca----------cacatacac--------------aaacgca----cacaTAAAAA------------TGTACAAACAAAAACCTAATACTATCTTGTC-TCTTTCTGTCATAGGAA----------------------------CACACGCACGCACACTTTtaaatagtatacaagcaaatgcataaatgcatacatagacatatgaatacataatacctacataaatatgtataaatacatttatacctacataacataggtaattcacgaaaaagaaataaaAATTGATTTTGATTCTTATTGTCTTATA-AAATGTATCAAGCAAATACACAC--------------------AAACACACACAC-CAGAGGAAGAGATATATAAGTCAAATTGGCAGTGTAGGACCAAAGCTATAATTGGAACACACTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAGATTTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57302990 506 + 70235451 TGACACTACTACCAGCAAGATTTAAAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAacacacacatgtgca----------cagacatac--------------aca--aa----cacacaAAAA------------TGTACAAACTAAAACCTAGTATTTTCTTGTC-TCTTTCTCTCATAGGAA----------------------------CACATGCACATATACTTTTAAATAGTATATAAGCAAatgcacaaatgcatacatatacatatgaatacataatacctacataaatacatgtaaatacatttatacctacataacataGG-AATTCA-GGAAAAGGAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATATATTAAGCAAATacacac----acacacacacacacacacacacacacac-CAGAGGAAGAGATATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAAAGATAGAAGCCAGATTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62994404 506 - 75711847 TGACACTACTACCAGCAAGATTTAAAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAacacacacatgtgca----------cagacatac--------------aca--aa----cacacaAAAA------------TGTACAAACTAAAACCTAGTATTTTCTTGTC-TCTTTCTCTCATAGGAA----------------------------CACATGCACATATACTTTTAAATAGTATATAAGCAAatgcacaaatgcatacatatacatatgaatacataatacctacataaatacatgtaaatacatttatacctacataacataGG-AATTCA-GGAAAAGGAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATATATTAAGCAAATacacac----acacacacacacacacacacacacacac-CAGAGGAAGAGATATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAATGATAGAAGCCAGATTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13547110 506 - 18804593 TGACACTACTACCAGCAAGATTTAAAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAacacacacatgtgca----------cagacatac--------------aca--aa----cacacaAAAA------------TGTACAAACTAAAACCTAGTATTTTCTTGTC-TCTTTCTCTCATAGGAA----------------------------CACATGCACATATACTTTTAAATAGTATATAAGCAAatgcacaaatgcatacatatacatatgaatacataatacctacataaatacatgtaaatacatttatacctacataacataGG-AATTCA-GGAAAAGGAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATATATTAAGCAAATacacac----acacacacacacacacacacacacacac-CAGAGGAAGAGATATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAATGATAGAAGCCAGATTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13163901 503 + 18905526 TGACACTACTACCAGCAAGATTTAAAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAacacacacatgtgca----------cagacatac--------------aca--aa----cacacaAAAA------------TGTACAAACTAAAACCTAGTATTTTCTTGTC-TCTTTCTCTCATAGGAa----------------------------cacatgcacatacacttttaaatagtatataagcaaatgcacaaatgcatacatatacatatgaatacataatacctacataaatacatgtaaatacatttatacctacataacataGG-AATTCA-GGAAAAGGAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATATATTAAGCAAATacacac----acacacacacacacacac---CCCCCCC-CAGAGGAAGAGACATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAATGACAGAAGCCAGATTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59993580 486 - 72318688 TGACACTACCACCAGCAAGATTT-AAAAACTGCTGCATTTAATTATTGTTGGGTTTTCTTTGAGAGAAAAGTAGGTTTTCTCT-GAAGAGAATAAC--A---AAATACACACATGTGCA----------CAGACATAC--------------------A----CACACAAAAA------------TGTACAAACTAAAACCTAATATTTTCTTGTC-TCTTTCTCTCATAGGAA----------------------------CACATGCACATATGCTTTTAAATAGTATATAAGCAAatgcacaaatgcatacatatacatatgaatacataatacctacataaatacatgtaaatacatttatacctacataacataGG-AATTCA-GGAAAAGGAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATGTATTAAGCAAATacacac-------------------cacacacacacac-CAGAGGAAGAGATATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAATGACAGAAGCCAGATTTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 327582 506 - 1517660 TGACACTACTACCAGCAAGATTTAAAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAacacacacatgtgca----------cagacatac--------------aca--aa----cacacaAAAA------------TGTACAAACTAAAACCTAGTATTTTCTTGTC-----TCTCTCATAGGAA----------------------------CACATGCacatacacttttaaatagcatataagcaaatgcacaaatgcatacatatacatatgaatacataatacctacataaatacatgtaaatacatttatacctacataacataGG-AATTCA-GGAAAAGGAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATATATTAAGCAAATacacacacacacacacacacacacacacacacacacac-CAGAGGAAGAGATATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAATGACAGAAGCCAGATTTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3427395 506 + 6513552 TGACACTACCACCAGCAAGATTT-AAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAGAGAAAAGTATGTTTTCTCT-GAAGAGAATAAC--A---AAacacacacatgtgca----------cagacatac--------------aca--aacactcacacaaaaa------------tatacaaacTAAAACCTAATATTTTCTTGTC-TCTTTCTCTCATAGGAa----------------------------cacatgcacatacacttttaaatagtatataagcaaatgtataaatgcatacatatacatatgaatacataatacctacataaacacatgtaaatacatttatacctacataacataGG-AATTCATGAAAAAGGAATAAAGACTGATTTTGATTCTTATTGTCTTATA-AAGTGTATTAAGCAAATacacgc--------aaacacacacacacacacacacac-CAGAGGAAGAGATATATAAGTCAAATTGGCAATGCAGGACCACAGCTATAATTGGGACACGTTTATGAAAATGAAGGAGCAGAATGACAGAAGCCAGATATCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105207217 478 + 117903854 ACACCCTACCACCAGCAAAATTT-AAAAACTGCTGCATTTAATTACTGTTGGTTTTTCTTTGAAAGAAAAGCATGTTTTCTCC-AACGAGAATAAC--A---AAACACACACATACTCA----------C----------------------ACA--CA----CACATAAAAA------------TGTACAAACTAAAACCTAATA-----TTGTC-TCTTTCTCTCCTAGGAG------------------cacacacacacacacacacacacacTTTTGAATAGTATGTAAGTAAatatataaatgcatacatatacatatgaatacatgatacatacataaatacatataaatacatttatacctacataAAATAGGTAATTCATGAAAAAGAAA------------TAAAAACTTATTGTCTTATA-AAAGGTATTAAGCAAATGCACAC------------------ACAAACACACACAC-CAGAGGAAGAGATATATAAATAAAATTGGCAGTGTAGGACTACAGCTATAATTGGGAAACACTTATGAAAATGAAGGAGCAGAGTGACAGAAGCTAGATTTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19398575 500 - 31320352 ATACCCTACCACCAGCAAAATTT-AAAAACTGCTGCACTTAATTATTGTTGGTTTTTCTTTGAAAGAAAAGCACGTTTTCTCC-AAAGAGAATAAC--A---AAACACACATGTGCACA----------CACATACAAAA------------ACA--CA----CACATAAAAA------------TGTACAAACTAAAACCTAATACTGTCTTGTC-TCTTTCTCTCCTAGGAG------cacacacacaaacacacacacacacacacacacacacTTTTAAATAGtatataagtaaatatataaatgcatacatatacatatgaatacatgatac----------acatataaatacatttatacctacataAAATAGGTAACTCATGAAAAAAAAA-------AGATTTTGATTCTTATTGTCTTACA-AAAGGTATTAAGCAAATGCACAC------------------ACAAACACACACAC-CAGAGGAAGAGATATATAAATTAAATTGGCAATGTAGGACTACAGCTGTAATTGGGACACACTTATGAAAATGAAGAAGCAGAGTGACAGAACCCAAATTTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1587717 513 + 2203405 ACACCCTACCACCAGCAAAATTT-AAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAAAGAAAAGCATGTTTTCTCC-AAAGAGAATAAC--A---AAacacacatgtgcaca----------cacatacacaa------------aca--ca----cacaTAAAAA------------TGTACAAAATAAAACCTAATATTGCCTTGTC-TCTTTCTCTCCTAGGAacacacacacacacacacacacacacacacacacacacacaTACTTTtaaatagtatataagtaaatatataaatgcatacacatacatatgaatacatgatac----------acacataaatacatttatacctacataAAATAGGTAACTCATGAAAAAGAAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAAGGTATTAAGCAAATGcacac------------------acaaacacacacac-CAGAGGAAGAGATATATAAATCAAATTGGCAATGTAGGACTATAGCTGTAATTGGGACACACTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAAATTTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3544091 511 - 14941987 ACACCCTACCACCAGCAAAATTT-AAAAACTGCTGCATTTAATTATTGTTGGTTTTTCTTTGAAAGAAAAACATGTTTTCTCC-AAAGAGAATAAC--A---AAACACACATGTGTaca----------cacatacacaa------------aca--ca----cacaTAAAAA------------TGTACAAACTAAAACCTAATATTGTCTTGTC-TCTTTCTCTCCTAGGAa------------cacacacacacacacaaacacacacacacacTTTTAAATAGtatataagtaaatatataaatgcatacatatacatatgaatacatgatacatacataaatacatataaatacatttatatctacataAAATAGGTAATTCATGAAAAAGAAATAAAAACTGATTTTGATTCTTATTGTCTTATA-AAATGTATTAAGCAAATGcacac------------------acaaacacacacac-CAGAGGAAGAGATATATAAATCAAATTGGCAATGTAGGACTACAGCTGTAATTGGGATACACTTATGAAAATGAAGGAGCAGAGTGACAGAAGCCAGATTTCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11204445 520 - 20685099 AGATGAAGCAGCCAGCTAAATTG-CAAACCTATTGTATTTAATTATTTTTGGTTTATGATTAAGAGAAATGCATGTTTTTTCCAAAAGAAGATAGA--A---GAACACGCACATGCACATATAACCATGCACATATAAAATGCACATATAACATA--CA----CATATAAAAAAGCACCCGAGTCAGTGCAAATCAGCCCCTAATGTCATATTTTCGTTTCTCCCTCCCAGGAA----------------TacacacacacacatacacacacacCCCTTTCAATTGCATTTATGTAAATATACAAAT----------ACATATGAAGAGATGATAC----------AGACATAAATACATCTATGAATACATAAAAGAGGTGAATCA-TGAAAAGAAACAAA-ATTGACTGTAATTCTTATGATCCTATACAAATCTGTTAAGTTTACACATAA-------------------TGCATCCCCACCCTCAGGGGGACAGACATACAAATCAAATTTGCAATGTAGGACCAGAGCTTTGACTGGGAAACACTTGCAGAAATGCAAAGG--GAGTGAGAGAAGCCAGATTTCA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112271691 402 - 122678785 AGATACTACAGCCAGCTAATTTG-TGAAACTACTATATTTAGTTATTGTTGATTTCATTTAGAG---AACCTGTGTTTTCCTA-GAATAGAATAATAGA---AAatacacagacataca----------tacacatgc--------------aca--ta----cacacacTTG------------TATGTGAACTAGCACCTAAAATTATCTTATTGTCTTTCTCT------------------------------------CACATGCACAC---TTTTAAAATAGTATATGAG-------------------------------------------------------------TACATACATGCATACATAAAAGAGATAATTTATGAAACA---------ATTGACTTTAATTCATATGGTCCTACA-AAAAATAT------AATATGTAA----------------------ACACACTCAC-CAGAGGAACAGATGTATGAACAAAATTAGCAATGGAAAGGTAGATCTATAATTGGGAATCACTTGGAAAAATGGAGGAGCAGAGTGACAGAAACTCGGTTTCA i canFam3.chr1 I 1 I 184 s dasNov3.JH575754 433598 409 - 2150887 ACAAACTACATCTAGCTAATTTG-TCAACTTGCTGTA-TAAATTATTGTTG-TTTTTCATCTAAAGAAATTTAGGTTTTCTGA-GAAGAGACTAAC--ACACAAACACA-ATGTTTGCA----------TGTACACAC---------------CA--CA----CACACACAAA------------TAGGCAAACAAGTACTAAA------CTTATC---TTACTGTTACA--------------------------------CATATATATGCACACTTTTTAGTAGTATATAAATAAATAAA-AAATGCATACATCCATATCTACATACA-AATATCAATATAATAATTTCTGAAAGGAATTAT---TAC-----------AGTTCT----------ATGAAAATTTATTTT--------------TCTG-AACTAAAACATACATAGACACCT------------------CCACACTTCCATGC-CAGAGACACAGATATATAAACCAAATTAGCAATTCAGG-CCAGATCTGTAATTG------------------------------TGGCAGAAACCAGATCTCA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1219858 4219 - 1406956 T a score=76986.000000 s hg38.chr18_GL383571v1_alt 15972 5 + 198278 AGAAA s panTro5.chr18 64968408 5 + 78221452 AGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64090872 5 + 77229886 AGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5309891 5 + 17472758 AGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139348855 5 - 152096393 AGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57303496 5 + 70235451 AGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62994910 5 - 75711847 AGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13547616 5 - 18804593 AGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13164404 5 + 18905526 AGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59994066 5 - 72318688 AGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 328088 5 - 1517660 AGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3427901 5 + 6513552 AGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105207695 5 + 117903854 AGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19399075 5 - 31320352 AGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1588230 5 + 2203405 AGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3544602 5 - 14941987 AGAAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11204965 5 - 20685099 AGAAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112272277 5 - 122678785 AAAAA i canFam3.chr1 I 184 C 0 s dasNov3.JH575754 434007 5 - 2150887 AGAAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1219858 4219 - 1406956 T a score=4072259.000000 s hg38.chr18_GL383571v1_alt 15977 295 + 198278 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAATGGGCAGTCTGATATATTCACAACCTGGCTACTGCTATTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATACCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT s panTro5.chr18 64968413 295 + 78221452 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGTGGGCAGTCTGATATATTCACAACCTGGCTCCTGCTATTTGAATCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATACCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64090877 295 + 77229886 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGTGGGCAGTCTGATATATTCACAACCTGGCTCCTGCTATTTGAATCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATACCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5309896 295 + 17472758 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGTGGGCAGTCTGATATATTCACAACCTGGCTACTGTTATTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATACCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139348860 295 - 152096393 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGTGGGCAGTCTCATATATTCACAACCTGGCTACTGCTATTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATGAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATACCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57303501 295 + 70235451 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCGGGCAGTCTGATGTATTCACAACCTGGCTACTGCTGTTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTATGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62994915 295 - 75711847 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCGGGCAGTCTGATGTATTCACAACCTGGCTACTGCTGTTTGAACCCTTTCCAACACAGTCACCTCAGAAGTATGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13547621 295 - 18804593 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCGGGCAGTCTGATGTATTCACAACCTGGCTACTGCTGTTTGAACCCTTTCCAACACAGTCGCCTCAGAATTATGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13164409 295 + 18905526 GATTTTTTTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCGGGCAGTCTGATGTATTCACAACCTGGCTACTGCTGTTTGAACCCTTTCCAACGCAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGTTATAGCTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59994071 295 - 72318688 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCGGGCAGTCTGATGTATTCACAACCTGGCTACTGCTGTTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGCTGTCTAACACGACACAGCTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 328093 295 - 1517660 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGTGGGCAGTCTGATGTATTCACAACCTGGCTACTGCTGTTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACACCACACAGCTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGTTATAGCTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3427906 295 + 6513552 GATTTTATTATAAAGCAAGGAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCGGGCAGTCTGATATATTCACAACCTGGTTACTGCTGTTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTGTGTATGCATCTTGGGAA-A-AT-AGATAAAGGCAAATCTAAAATAACTGACTCACTATGATGTCTGACACCACACAGCTCAATACCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGATAATTATTCTCCTCCTCAATTTGCCATAGCTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105207700 288 + 117903854 CATTTTATTACAAAGCAAGAAATTGGCTGCAG-TGAGGAAGAATGAGCAACAAACCTTGTGGAACAGTGGGCGGTCTGATATATTCACAACATGGCTACTGCTATTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTATGTATGCATCTTGGAAA-A-AG-AGACAAAGGCAAATCTAAAATAACTGCCTCACTATGATGTCTGACAC-------CTCAATACCCTCACTGTGGAACTCTTACAATAGAG-AGACA-TAG------------------------AGAAAGAGATTTATTCTCCTCCTCAATTTGCCATAGTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19399080 287 - 31320352 TATTTTATTATAAAGCAAGAAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCAGGCAGTCTGATATATTAACAACCTAGCTACTGCTATTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTATGTATGCATCCTGGGAA-A-AT-AGACAAAGGCAAATCTAAAATAACTGCCTCA-TATGATGTCTGACAC-------CTCAATATCCTCACTGTGTAACTCTTTCAATAGAG-AGACA-CAG------------------------AGAAAGAGATTTATTCTCCTCCTCAATTTGCCATAGTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1588235 288 + 2203405 TATTTTATTATAAAGCAGGAAATTGGCTGCAG-TGAGGAAGAACAAGCAATAAACCTTGTGGAACAGCGGACGGTCTAATATATTCACAACCTGGCTACTGCTATTTGAACCCTTTCCAACACGGTAGCCTCAGAAGTATGTATGCATCTTGGGAA-A-AT-AGACAAAGGCAAAACTAAAATAACTGTCTCACCATGATGTCTGACAC-------CTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-CAG------------------------AGAAAGAGATTTATTCTCCTCCTCAATTTGCCATAGCTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3544607 288 - 14941987 TATTTTATTATAAAGCAAGAAATTGGCTGCAG-TGAGGAAGAATGAGCAATAAACCTTGTGGAACAGCAGGCAGTCTGATATATTCACAACCTGGCTACTGCTATTTGAACCCTTTCCAACACAGTCGCCTCAGAAGTATGTATGCATCTTGGGAA-A-AT-AGACAAAGGCAAATCTCAAATAACTGCCTCACTATGATGTCTGACAC-------CTCAATATCCTCACTGTGGAACTCTTTCAATAGAG-AGACA-TAG------------------------AGAAAGAGATTTATTCTCCTCCTCAATTTGCCATAGTTCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1215639 297 - 1406956 GATTTTATTATAAGGCAAGGAGTTGGCTACAA-TAAGAAAGCCTCAGCAATAAAACTTGTGGAACAGAGGGCAGTCTGATATTTTGACAACTTGGCTACTACTATTTGAACCCTTTCCAACACTGTCACCTCAGAAGTGTGTATGCATCTTGGAAA-G-ACTAGATGAAAGCAAATATAAAATAACTGCCTCACTAAATTGTGTGACACCACACAGCTCAGTACTCATACTGTGGAACTCTTTCAAGAGGG-AGACA-CAG-----------------------AAGAAAGAGAATCATTCTTTTCCTCAGTTTACCATAGCTCT i proCoq1.NW_012148742v1 T 4219 I 11259 s otoGar3.GL873546 11204970 295 - 20685099 GATTTTCTTGAGAAGCAAGGACTTGGCTACGA-TGAGCAAACCCCAGCAATAAAACTCGTGGACCAGAGGGCAGTCTGCTATTTTGACAACTTGGCTGTTACTCTCTGAATCTTATCCAACACTGACACCTCAGCAGTGTGTCTGCATCTTGGGAA-G-ATGAGATAAAAGCAAATCTGAAATATCTGTCTCAGTAAATGGTATGACACCACAGAGTTCAGTTCTCATAT--TGGAACCCGTCCAAGAGGG-AGACA-CAG-----------------------AACAAAGAGAATTATTCTCCTGCTCAATTTACCGTAGCTCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112272282 298 - 122678785 GATTTTATTATAAGGCAAGAAATTGGCCAAAATTAAATAGGATTCAGCAATAAAATTTATGGAACACAGAACAGGCTGATATTTTGACAACCTAGCTACTGCTCTCTGAACGCTGTCCAGCACTGCCACCTCAGAAGTGTGTATGTGTCTTGGGAAGA-AT-AAGTGAAAGCAAATCTAAAAGAATTGTCTC-CTAAATTGAGTGACACCGT----------------------GTACCCTTTCAATAGGG-AGACA-CAAAAGAAAGACAATTATTAAAAAAAAAGAAAGATAATTATTCTCCTGCTCAATTTGCCATAGCTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 434012 279 - 2150887 AATTTTATTTTGAAGCAAGAAATCAACAACAA-TGAACAAGATTCGACAATAAGACTTGTGGAACCGAGGCCAGCCCGATGTTTTAATAGCCTGGATACCACTACTTGAACTCCTTCC-------TCCCCCAAGAAGTGTGTGCATTTCTCGGGAA-GTAC-AGATGAAGGCAAATCTGAAAGAACTGCTGCACT-----------CACCATTTAGTCCTGCACCCTAACTAGGGAAGCCTTTCAAGAGGGCAGACACCAA------------------------AGAAAGAGAAG-ACGCTCCTTCACAATTTGCCGTAGCTCT i dasNov3.JH575754 C 0 C 0 a score=2569217.000000 s hg38.chr18_GL383571v1_alt 16272 210 + 198278 GGTCAGTCTGTGATGTCATGGGGATGG---AAAGTCTTGGTAGGCA-TAATTGTCAGCAGGGATCTGAACCTATA-TTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAACAGGTAATCACCTGCTCTGATGCTAGAGGTCATATGGGATTCCCAGAAGCATTGGTAGGGAGAA s panTro5.chr18 64968708 210 + 78221452 GGTCAGTCTGTGATGTCATGGGGATGG---AAAGTCTTGGTCGGCA-TAATTGTCAGCAGGGATCTGAACCTATA-TTTATATATTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGATGCTAGAGGTCATGTGGGATTCCCAGAAGCATTGGTAGGGAGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64091172 210 + 77229886 GGTCAGTCTGTGATGTCATGGGGATGG---AAAGTCTTGGTCGGCA-TAATTGTCAGCAGGGATCTGAACCTATA-TTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGATGCTAGAGGTCATGTGGGATTCCCAGAAGCATTGGTAGGGAGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5310191 210 + 17472758 GGTCAGTCTGTGATGTCATGGGGATGG---AAAGTCTTGGTAGGCA-TAATTGTCAGCAGGGATCTGAACCTATA-TTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGATGCTAGAGGTCATATGGGATTCCCAGAAGCATTGGTAGGGAGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139349155 213 - 152096393 GGTCAGTCTGTGATGTCATGGGGATGGCATAATGTCTTGGTAGGCA-TAATGGTCAGCAGGGATCTGAACCTATA-TTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTTGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGATGCTAGAGGTCATACGGGATTCCCAGAAGCATTGGTAGGGAGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57303796 211 + 70235451 GGTCAGTCTGTGATGTCATGGTGATGG---AAAGTCTTGGTAGGCA-TAATGGTCAGCAGGGATCTGAACCTATATTTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGGTGCTAGAGGTCATACGGGATTTCCAGAAGCATTGGTAGGGAGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62995210 211 - 75711847 GGTCAGTCTGTGATGTCATGGTGATGG---AAAGTCTTGGTAGGCA-TAATGGTCAGCAGGGATCTGAACCTATATTTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGGTGCTAGAGGTCATATGGGATTTCCAGAAGCATTGGTAGGGAGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13547916 211 - 18804593 GGTCAGTCTGTGATGTCATGGTGATGG---AAAGTCTTGGTAGGCA-TAATGGTCAGCAGGGATCTGAACCTATATTTTATATGTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGGTGCTAGAGGTCATATGGGATTTCCAGAAGCATTGGTAGGGAGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13164704 211 + 18905526 GGTCAGTCTGTGATGTCATGGTGATGG---AAAGTCTTGGTAGGCA-TAATGGTCAGCAGGGATCTGAACCTGTATTTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGGTGCTAGAGGTCATATGGGATTCCCAGAAGCATTGGTAGGGAGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59994366 211 - 72318688 GGTCAGTCTGTGATGTCATGGGGATGG---AAAGTCTTGGTAGGAA-TAATGGTCAGCAGGGATCTGAACCTATATTTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGGTGCTAGAGGTCATATGGGATTCCCAGAAGCATTGGTAGGGAGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 328388 211 - 1517660 GGTCAGTCTGTGATGTCATGGTGATGG---AAAGTCTTGGTAGGCA-TAATGGTCAGCAGGGATCTGAACCTATATTTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCGGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCACCTGCTCTGGTGCTAGAGGTCATATGGGATTCCCAGAAGCATTGGTAGGGAGGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3428201 211 + 6513552 GGTCAGTCTGTGATGTCATGGGGATGG---AAAGTCTTGTTAGGCA-TAATGGTCAGCAGGGATCTAAACTTATATTTTATATCTTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTCAGGAATTAAACAGCAGACAGGTAGCAGCAGGTAATCAACTGCTCTGGTGCTAGAGGTCATATGGGATTCCCAGAAGCATTGGTAGGGAGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105207988 211 + 117903854 GGTCAGTCTGTGATGTCACGGGGATAG---TAAGTCTTGGTAGGCA-TAATGATCAGCAGGGATTTGAACCTATATTTTACATCTTTTGCT---CAGAACTGTGA-AATCAAACAACAGCCTGGTGTAGGGAATTAAACAGCAGACATGTAGCATCAGGTAATCACCAGGTCTGATGATAGAGGTCATATGGGATTCCCAAAAGCATTGGTAGGGAGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19399367 211 - 31320352 GGTCAGTCTGTGATGTCACGGGGATAG---AAAGTCTTGGTAGGCT-TAATGATCAGCAGGGATTTGAACCTATATTTTACATCTGTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTAGGGAATTAAACAGCAGACATGCAGCATCAGGCAATCACCTGGCCTGATGATACAGGTCATATGGGATTCCCAAAAGCATTGGTACGGAGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1588523 211 + 2203405 GGTCAGTCTGTGATGTCACGGGGATAG---AAAGTCTTGGTAGGCA-TAATGATCAGTAGGGATTTGAACCTATGTTTTACATCCTTTGCT---CAGAACTGTGG-AATCAAACAACAGCCTGGTGTAGGGAATTAAACAGCAGACATGTAGCATCAGGCAATCACCTGGCCTGATGATAGAGGTCATATGGGATTCCCAAAAGCATTGGTAGGGAGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3544895 211 - 14941987 GGTCAGTCTGTGATGTCATGGGGATAC---AAAGTCTTGATAGGCA-TAATGATCAGCAGGGATTTGAACCTGTATTTTACATCTTTTGCT---CAGAACTGTGG-AATCATACAACAGCCTGGTGTAGGGAATTAAACAGCAGACATGTAGCATCAGGTAATCACCTGGTCTGATGATAGAGGTCATATAGGATTCCCAAAAGCATTGGTACGGAAAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11205265 193 - 20685099 GGTCAGTCTATGGCAACGTGA-GATGG---GAAGTCCTGGTGGTCC-TAACAATTCACAGGAGTCTAAACCTGTATTTTATATGATTTGCTGTGATGAGCTGTGGAAAGAAAACAAAAGCCTGGTGTGGAGAATTAAATAATAGACAGATGGC-----------------TCCAACGCCAAAGCTCA----GAGTTCTCAGAAGTACTTCAAGGAAGAA i otoGar3.GL873546 C 0 I 2397 s canFam3.chr1 112272580 197 - 122678785 GGTCAGTCTC----------AGCATTG---AAAGTCTTGGTAGGCA-TAATGACTACCAAGGATCTGAACCTGTATTCTATAT-TTTTGCT---AAGAAATGCAG-AATCAAAAAGTAGTCTGGGATCGGGAATT-AACGGCAGACTGGTGGCAGAAGGGAACCACGCACTCTGATGCAAAA--CTCTACTGGTTTCCTGGAAGTCCTAGTAGGGATAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 434291 207 - 2150887 ----GCTCTTTGCTGCCA-GGGGATGA---AAAGGCCCGGTAGGCATTAATCAAAAACAAGGAGGTGAACCTGGATTTTATATCTTTTGCT---CAGACCTGTGG-AATCAAACAAAAGTCTGGTGTAGGGAATTAAATAGCAGACTGGCAATAGCAAGTAATGGCCTACTCTGATTCTAAAGCACATCTGAGGTTCCCAGAAGTACTGGCATAGAGAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I a score=2974730.000000 s hg38.chr18_GL383571v1_alt 16482 280 + 198278 CTTTGAAAATTGCCATTATCCAATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGACTGTTTATGAAGAAGTATTTATGACAGTGCAGAAAGCTACAAGTAGAGCCCAAAGCCTAATGATTTTCTCTCAGAAATTACTGTCTTTAAAAAATGACTCTGTAATAT-AAAAGGTGTAATAATGGCAT-A-ATATATAAATTTTCAAAGTTTTATCAAAGTCACTTTGGTGT----GTTTTAGTA---TAGTAGTCTCTTCTTTT s panTro5.chr18 64968918 280 + 78221452 CTTTGAAAATTGCCATTATCCAATGCAATCTTCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGACTGTTTATAAAGAAGTATTTATGATAGTGCAGAAAGCCACAAGTAGAGCCCAAAGCCTAATGATTTTCTCTCAGAAATTACTGTCTTTAAAAAATGACTCTGTAATAT-AAAAGGTGTAATAATGGCAT-A-ATATATAAATCTTCAAAGTTTTATCAAAGTCACTTTGGTGT----GTTTTAGTA---TAGTAGTCTCTTCTTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64091382 280 + 77229886 CTTTGAAAATTGCCATTATCCAATGCAATCTTCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGACTGTTTGTAAAGAAGTATTTATGATAGTGCAGAAAGCCACAAGTAGAGCCCAAAGCCTAATGATTTTCTCTCAGAAATTACTGTCTTTAAAAAATGACTCTGTAATAT-AAAAGGTGTAATAATGGCAT-A-ATATATAAATCTTCAAAGTTTTATCAAAGTCACTTTGGTGT----GTTTTAGTA---TAGTAGTCTCTTCTTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5310401 280 + 17472758 CTTTGAAAATTGCCATTATCCAATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTACTGAAACCTGACTGTTTATGGAGAAGTATTTATGACAGTGCAGAAAGCCACAAGTAGAGCCCAAAGCCTAATGATTTTCTCTCAGAAATTACTGTCTTTAAAAAATGACTCTGTAATAT-AAAAGGTGTAATAATGGTAT-A-ATATATAAATCTTCAAAGTTTTATCAAAGTCACTTTGGTGT----GTTTTAGTA---TAGTAGTCTCTTCTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139349368 280 - 152096393 CTTTGAAAATTGCAGTTATCCAGTGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAAGCTGACTGTTTATAAAGAAGTATTTATGATAGTGCAGAAAGCCACAAGTTGAGCCCAAAGCCTAGTGATTTTCTCTCAGAAATTACTGTCTTTAAAAAATGACTCTGTAATAT-AAAAGGTGTAATAGTGGCAT-A-ATATATAAATCTTCAAAGTTTTATCAAAGTCACTTTGGTGT----GTTGTAGTA---TAGTAGTCTATTCTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57304007 280 + 70235451 CTTTGAAAATTGCCATTATGCAATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGTCTGTTTTCAAAGACATATTTATGGTAGTGCAGGAAATCACAAGTTGAGCCCAAAGCCTAATGATTTTATCTCAGAAATTACTGTCTTTAAAAAATAACTCTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATTTTCACAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGTAGTCTATCCTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62995421 280 - 75711847 CTTTGAAAATTTCCATTATGCAATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGTCTGTTTTCAAAGACATATTTACGGTAGTGCAGGAAATCACAAGTTGAGCCCAAAGCCTAATGACTTTATCTCAGAAATTACTGTCTTTAAAAAATAACTCTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATTTTCACAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGTAGTCTATCCTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13548127 280 - 18804593 CTTTGAAAATTGCCATTACGCAATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGTCTGTTTTCAAAGACATATTTATGGTAGTGCAGGAAATCACAAGTTGAGCCCAAAGCCTAATGATTTTATCTCAGAAATTACTGTCTTTAAAAAATAACTCTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATTTTCACAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGTAGTCTATCCTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13164915 280 + 18905526 CTTTGAAAATTGCCATTATCCGATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGGCTGTTTATAAAGACATATTTATGGTAGTGCAGAAAATCACAAGTTGAGCCCAAAGCCTAATGATTTCATCTCAGAAATTACTGTCTTTAAAAAATAACTCTGTAATAT-AAAAGGTGTAATAGTGGCAT-A-ATATATAAATCTTCACAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGTAGTCTATCCTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59994577 279 - 72318688 CTTTGAAAATTGCCATTATCCAATGCAACCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGGCTGTTTATAAAGACATGTTTATGGTAGTGCAGAAAACCACAAGTTGAGCCCAAAGCCTAATGATTTTATCTCAGAAATTACTGTCTTTAAAAAATAACTCTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATCTTC-CAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGAAGTCTATCCTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 328599 280 - 1517660 CTTTGAAAATTGCCATTATCCGATGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTTCCTGGAGACTAGTGAAACCTGGCTGTTTATAAAGACATATTTATGGTAGTGCAGAAAATCACAAGTTGAGCCCAAAGCCTAATGATTTCATCTCAGAAATTACTGTCTTTAAAAAATAACTCTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATCTTCACAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGTAGTCTATCCTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3428412 280 + 6513552 CTTTGAAAATTGCCATTATCCAGTGCAATCTGCTTATTAATTTTAATTGGACTTGGTTAGTCCCTGGAGACTAGTGAAACCTGGCTGTTTAAAAAGACATATTTATGGTAGTGCAGAAAATCACAAGTTGAGCCCAAAGCCTAATGATTGTATCTCAGAAATTACTGTCTTTAAAAAATGACTCTGTAAAAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATCCTCCCAGTTTTATCAAAGTCACTTTGGTGT----GCTTTAGTA---TAGTAGTCTATCCTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105208199 256 + 117903854 CTTTGAAAATTGTAGTTATCCAATGCAA---------------TAACTACATCGGA-TAGTTATTG--------TGAAATCTGACTGTTTATAAAGACATAATTACGATAGTGCAGAAAGCCACAAGTTGAGTCCAAACCCTAATGATTTTCTCTCAGAAATTACTGCCTTTAAAAAATGACACTGTAATAT-AAAAGGTATAGTAGTGGCAC-A-ATACATAAATCTTCAAAGTTTTATTAAAACTACTTTGGTGT----CTTTTAGAA---TGGTAGCCTATTCTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19399578 280 - 31320352 CTTTGAAAACTGCAGTTATCCAATGCAATCTGCTTATTAATTTTAATTGGACTGGGTTACTTCCTGGAGACTGTTGAAACCTGACTGTTTATAAAGACATATTTACAATAGTGCAGAAAGTCACAAGTTCAGTCCAAACCCTAATAATTTTCTGTTAGAAATTACTGCCTTTAAAAAATGGCTTTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATCTTCAAAGTTTTATTAAAGCCACTTTGGTGT----GTTTTAGAA---TGGTAGCCTATTCTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1588734 280 + 2203405 CTTTGAAAATTGCAGTTATCCAATGCAATCTGCTTATTAATTTTAATTGGACTGTGTTAGTTCTTGGAGACTAGTGAAACCTGACTGTTTATAAAGGCATATTTACAATAGTGCAGAAAGCCACAAGTTGAGTCCAAACCCTAATGATTTTCTGTCAGAAATTAATGCCTTTAAAAAATGACTCTGTAATAT-AAAAGGTATAATAGTGATGT-A-ATATATAAATCTTCAAAGTTTTAGTAAAGCCACTTTGGTGT----GTTTTAGAA---TGGTAGCCTATTCTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3545106 280 - 14941987 CTTTGAAAATTGCAGTTATCCAATGCAATCTGCTCATTAATTTTAATTGGACTGGGTTAGTTCCTGGAGACTAGTGAAACCTGACTGTTTAGAAAGACATATTTGCAATAATGCAGAAAGCCACAAGTTGAGTTCAAACCCTAATGATTTTCTCTCAGAAATTACTGCCTTTAAAAAATGACTCTGTAATAT-AAAAGGTATAATAGTGGCAT-A-ATATATAAATCTTCAAAGTTTTATTAAAGCCACTTTGGTGT----GTTTTAGAA---TGGTATCCTATTCTTTT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112272777 283 - 122678785 GTTTGAAAATTGCAGTTATCCAATGCAATCTGCTCATTAATTTTAATTGGACTTCATTAGTTCCTAGAGACTAGTAAAGCCTGAGTATTTATGAAGACCTATCTGTAATAGTGTAGAAAACCACAACTTCAGTCCAAAGCTTAATGGTTTCCCCTTAGAAATTAATATCTT--AAAGTCGACTTTGTGAAATAAAAAGGCATTACAGCAGCATAA-ATGTAGAATTCATTAAAGTTTTATGTGTGTCACTTTGGTAA----GTTTTAGTAGTTTCATAGCCTATTGTTTT i canFam3.chr1 C 0 I 175 s dasNov3.JH575754 434498 265 - 2150887 -TGTTGAAGGCGCAGGTATCCTACACAATCTGTTTATTAATTTTAATTGAACTTCATTAGCTCCTAGTGACGAAT-AAACTTGA--------------GTATTTATAACAGTGTAGAAAACCACAAGTTGAGTCCAAAGCATAATAATTCACCTTCAGGTTTTAATATATTTAAGTGTTCATTAAATCACAA-AGAAATTATAACA---GCAT-ACATGACTAAACCATGAAAG-TTTATCTGTTCCACTTCAGCATGTTAGTTTTAGTA---TGCTGTACAATTATGTA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=2772832.000000 s hg38.chr18_GL383571v1_alt 16762 280 + 198278 ---AAAACGAAA--ATGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGATAGAATC--------------TTTTTACTGAAGATTCACTGTTATGTTATGTTAATAGGGTTGTGGCTTAACCATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAATTATGAAACCTTATCATTATAAATTAGAAAAAAACATTAATATGAACAT-AAATTTAAATGAGCATC-AAAA-ATTCACT----------AAAAAAGAAACCACTTTCAAAGAATAGTTC s panTro5.chr18 64969198 281 + 78221452 ---AAAACGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGATAGAATC--------------TTTTTACTGAAGATTCACTGTTATGTTATGTTAATAGGGTTGTGGCTTAACAATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAATTATGAAACCTTATCATTATAAATTAGAAAAAAACATTAATATGAACAT-AAATTTAAATGAGCATC-AAAA-ATTCACTA---------AAAAAAAAAAACACTTTCAAAGAATAGTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64091662 281 + 77229886 ---AAAACGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGATAGAATC--------------TTTTTACTGAAGATTCACTGTTATGTTATGTTAATAGGGTTGTGGCTTAACAATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAATTATGAAACCTTATCATTATAAATTAGAAAAAAACATTAATATGAACAT-AAATTTAAATGAGCATC-AAAA-ATTCACTA---------AAAAAAAAAAACACTTTCAAAGAATAGTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5310681 279 + 17472758 ---AAAACGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGATAGAATC--------------TTTTTACTGAAGATTCACTGTAATGTTATGTTAATAGGGTTGTGGCTTAACAATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAATTATGAAACCTTATCATTATAAATTAGAAAAAAACATTAATATGAACAT-AAATTTAAATGAGCATC-AAAA-ATTCACT-----------AAAAAAAAACCACTTTCAAAGAATAGTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139349648 277 - 152096393 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAAACAAAGCAAAT------GATAGAATC--------------TTTTTACTGAAGATTCACTGTTATGTTACGTTAACAGGATTGTGGCTTAACAATCTTTCGTATATTAAGGAACAATATTACTTAAATCCTATCACTTTGAAGTGAataaattatgaaaccttatcattataaattagaaaaaaacattaatatgaacataaaatgtaaatGAGCACC-AAAA-ATTCACT----------AAAAAAAAAACCACTTTCAAAGAATAGTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57304287 276 + 70235451 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGCTAGAATC--------------TTTTTACTGAAGATTCACTGTTACATTATGTTAACAGGGTTGTGGCTTAACAATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAataagttatgaaaccttatcattacacattagaaaataat-----tatgaatataaaatataaatgaacatc-aaaa-attcact----------aaaaaataaaCCACTTTCAAAGAATAGTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62995701 276 - 75711847 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGCTAGAATC--------------TTTTTACTGAAGATTCACTGTTACATTATGTTAACAGGGTTGTGGCTTAACAATCTTTCGTATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAataagttatgaaaccttatcattacacattagaaaacaat-----tatgaatataaaatttaaatgaacatc-aaaa-attcact----------aaaaaataaaCCACTTTCAAAGAATAGTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13548407 276 - 18804593 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGCTAGAATC--------------TTTTTACTGAAGATTCACTGTTACATTATGTTAACAGGGTTGTGGCTTAACAATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAGTTATGAAACCTTATCATTACACATTAGAAAACAAT-----TATGAATATAAAATTTAAATGAACATC-AAAA-ATTCACT----------AAAAAATAAACCACTTTCAAAGAATAGTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13165195 276 + 18905526 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGCTAGAATC--------------TTTTTACTGAAGATTCACTGTTACATTATGTTAACAGGGTTGTGGCTTAACAATCTTTCAAATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAGTTATGAAACCTTATCATTACACATTAGAAAACAAT-----TATGAACATAAAATTTAAATGAACATC-AAAA-ATTCACT----------AAAAAAGAAACCACTTTCAAAGAATAGTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59994856 276 - 72318688 ---AAAAAGAAA--AAGAAACAAGATTAGGAAATTATGTGAGAACCAAAGCAAAT--GATAGCTAGAATC--------------TTTTTACTGAAGATTCACTGTTACATTATGTTAACAGGGTTGTGGCTTAACAATCTTTCATATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAGTTATGAAACCTTATCATTACACATTAGAAAACAAT-----TATGAACATAAAATTTAAATGAACATC-AAAA-ATTCACT----------AAAAAATAAACCACTTTCAAAGAATAGTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 328879 276 - 1517660 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAACCAAAGCAAAT--GATAGCTAGAATC--------------TTTTTACTGAAGATTCACTGTTACATTATGTTAACAGGGTTGTGGCTTAACAATCTTTCAAATATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAGTTATGAAACCTTATCATTACACATTAGAAAACAAT-----TATGAACAGAAAATTTAAATGAACATC-AAAA-ATTCACT----------AAAAAATAAACCACTTTCAAAGAATAGTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3428692 276 + 6513552 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTGAGAAACAAAGCAAAT--GATAGCTTGAATC--------------TTTTTACTGAAGATTCACTGTTATGTTATGTTAACAGAGTTGTGGCTTAACAATCTTTCATACATTAAGGAACAATACTACTTAAATCCTATCACTTTGAAATGAATAAGTTATGAAACCTTATCATTATACATTAGAAAACAAT-----TATAAACATAAAATTTAAATGAACATC-AAAA-ATTCACT----------AAAACATAAGCCACTTTCAAAGAATAGTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105208455 288 + 117903854 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTAAGAACCAAAGCAAAT--GATAGATAAGATCTTCTAGGGAAAG-TTTTTAACTGAAGATTCACTG-----TTATGTTAATAAGGTTGTGACTTAACAATCTTTTATATATTAAGGAACAATACTACTTAAAGTGTAGCACTTTGAAATGAATAAATTATAAAACTTTGTCACTATAAATTAG-AAAAAACATTAATATGAACATAAAATTTTAATGAACATG-AAAA-ATTCACT----------AAGAAATGAACCACTTTCGAAGAATGATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19399858 285 - 31320352 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTAAGAACTAAAGCAAGT--GACAGATAAGATCTTCTAGGGAAAG-TTTTTAACTGAAGATTCACTG-----TTATGTTAATAGGGTTGTGACTTAACAATCTCTTATATATTAAGGAAAAATACTACTTAAATTATAGCACTTTGAAATGAATAAATTATGAAACTTTGTCACTATAAATTAG----TAACATTAATATGAACATAAAATTTTAATGAACATG-AAAA-ATTCACT----------AAGAAATGAACCACTTTCAAAGAATGATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1589014 286 + 2203405 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTAAGAACCAAAACAAAT--GATAGATAAGATCTTCTAGGGAAAG-TTTTTAACTGAAGATTCACTG-----TTATGTTAATAGGGTTGTGACTTAACAATCTTTTATATATTAAGGAACAATACTACTTAAATTATAGCACTTTGAAATGAATAAATTATGAAACTTTGTCAC--TAAATTAG-AAAAAACATTAATATGAACATAAAATTTTAATGAACATG-AAAA-ATTCACT----------AAGAAATGAACCACTTTCAAAGAATGATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3545386 288 - 14941987 ---AAAAAGAAA--AAGAAACAAGATTAGGAAGTTATGTAAGAACCAAAGCAAAT--GATAGAGAAGATCTTCTAGGGAAAG-ATTTTAATTGAAGATTCACTG-----TTATGTTAATAGGGTTGTGACTTAACAATCTTTTATATATTAAGGAACAATGCTACTTAAATTATAGCACTTTGAAATGAATAAATTATGAATCTTTGTCACTATAAATTAG-AAAAAACATTAATATGAACATAAAATTTTAATGAACATG-AAAA-ATTCACT----------AAGAAATGAACCACTTTCAAAGAATGATTT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112273235 272 - 122678785 ---AAAAAAAAA--AACCAACAAAGTTAGGAAGCTTTGTAGAAATCTATGCAAAT--GATAGAT-GGATCTACTACAAAGAGTTCCATTACTGAAGATTCACTG----------TTAATGGGTATGCAATCTAATAATTCTTCTTATTTTGACAAA-AATACTACTTAAATCCTAGAACTTTGAAATGAATAAATTATGGAACTTTATAAT------GTAGCAAAAAA------TATGGTCATAGGACTTAGATAGGCATCTAAAA-GGTCTCT----------AAGAAATAGGCTACTTTTAAAGTATATTAT i canFam3.chr1 I 175 C 0 s dasNov3.JH575754 434763 280 - 2150887 AGAAAGAAGAAAACAAGAAGCAGGGTTGAGAAGTTACACAGGAGCCTGGGTGAATTTTCTAGGAAGAGTT--------------CTACTACTGAAGACTCG----------ACGTTAATGGGTTTGTGATTAAATAATCCTC---ATTTTGAGAAG-AATACTACTCAAATCCTAGCACTCTGAAATGAAAAAATTGCAAAAC---ATGATGATAAATGAGTAAAAAGTATTAATTTGATCATAGGATATAAATGGCCATC-ACAATGCTTATTATGAATGGGGAAAGAATAATCT--CTTCAAAAAACAGTTC i dasNov3.JH575754 C 0 I 1827 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=1496016.000000 s hg38.chr18_GL383571v1_alt 17042 181 + 198278 GCTTTCTTCTTTTCTAAGATTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGTAAACACAACAAAAATACAACTTTCATGTA--TG--------------------cacacacacacacacacatgcacacacacaaataaacaTCAACCCTGACAT s panTro5.chr18 64969479 165 + 78221452 GCTTTCTTCTTTTCTAAGATTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGTA--TG--------------------CACA----------------GACACACACAATTAAACATCAACCCTGACAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64091943 165 + 77229886 GCTTTCTTCTTTTCTAAGATTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGTA--TG--------------------CACA----------------GACACACACAATTAAACATCAACCCTGACAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5310960 179 + 17472758 GCTTTCTTCTTTTCTAAGATTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACAGGCATAATTGAGATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGTA--TG--------------------caca--gacacacacacacgcacacacacaaataaacaTCAACCCTGACAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139349925 181 - 152096393 GCTTTCTTCTTTTCTAGGATTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAACTGAGATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGTA--TG--------------------cacagacacacacacacaggcacacacacaaataaacaTCAATCCTCACAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57304563 144 + 70235451 GCTTTCTGCTTTTCTAAGATTTCAAAAATCATAAAT---------------------TGTTTTTATCTGGGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACA--------------------GACACAAATAAACATCAACCCTGACAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62995977 144 - 75711847 GCTTTCTGCTTTTCTAAGATTTCAAAAATCATAAAT---------------------TGTTTTTATCTAAGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACA--------------------GACACAAATAAACATCAACCCTGACAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13548683 144 - 18804593 GCTTTCTGCTTTTCTAAGATTTCAAAAATCATAAAT---------------------TGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACA--------------------GACACAAATAAACATCAACCCTGACAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13165471 161 + 18905526 ACTTTCTGCTTTTCTAAGATTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACG--------------------GACACAAATAAACATCAACCCTGACAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59995132 161 - 72318688 ACTTTCTGCTTTTCTAAGATTTCAAAAATCAGAAATTCTAGAAACTCTCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACA--------------------GACACAAGTAAACATCAACCCTGACAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 329155 161 - 1517660 ACTTTCTGCTTTTCTAAGAGTTCAAAAATCAGAAATTCTAGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACG--------------------GACAGAAATAAACATCAACCCTGACAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3428968 161 + 6513552 GCTTTCTTCTTTTCTAAGATTTCAAAAATCAGAAATTCTGGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAATTGAGATGTGT---AAAAATGCAAACAAAACAAAAATACAACTTTTATGCA--TG--------------------CACA--------------------GACACAAATAAACATCAACCCTGACAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105208743 169 + 117903854 GCTTT---CTTTTCTAAGAATTCAAAAATCAGAAATTCTAGAAAATTCCT----AGGTGTTTTTATCTGAGGAGAATGGCAT-------ATGTGT---AAAAATGTAAACAAAACAAAAATACAGCTTCCATGca------------------------cacacacacacacatacacacacacacaaacacaaacaTCAACCCTGACAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19400143 192 - 31320352 GCTTT---CTTTTCTAAGAATTCAAAAATCAGAAATTCTAGAAATTCCCT----AGGTGTTTTTATCTGGTGAGACTGGCATA------ATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGCA--TGCGCGCGcacgcgcacgcgcgcacacacacacacacacacacacacacaAATGCAAACATCAACCCTGACAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1589300 180 + 2203405 GCTTT---CTTTTCTAAGAATTCAAAAATCAGAAATTCTAGAAATTCCCT----AGGTGTTTTGATCTGAGGAGACTGGCATA------ATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGCA--TGTACAAaca------------cacacacacacacacacacacacacacacacGCAAACATTAACCCTGACAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3545674 164 - 14941987 GCTTT---ATTTTCTAAGAATTCAAAAATCAGAAATTCTGGAAACTCCCT----AGGTGTTTTTATCTGAGGAGACTGGCATAAT----ATGTGT---AAAAATGTAAACAAAACAAAAATACAACTTTCATGCA--TG--------------------cacacacacacccatacacaca----------caaacaTCAACCCTGACAT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112273507 166 - 122678785 TTTTCCTTCTTTTCTAAGACTTCAAAAGTTAAGAATTATAGAAACTCTCTGAAAAAGTGTGCATATCTAAGGAGACTAGCAAAGC----CTGTGTGAAGAAAATGTGAACAAAACAAAAGCACAACTTTCATACAAATG--------------------TACA--------------------CACATACACACACCTCACCCCAGACAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 436870 181 - 2150887 GTTTGCTTTTTTCCCTAACATTACAAAATCCTAAACTTTAGAAACTTCTTGAAAGAGTACTGACATTTGAGGAGATTGGACACATTTTAGCATGT---AAATATGCACAAAAAATAAAAACATCAGTTTCTTTCA--TT--------------------CAAA----CACACACACAGATACACAGACTCACAGGCATTGACTCAGGCAC i dasNov3.JH575754 I 1827 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=413343.000000 s hg38.chr18_GL383571v1_alt 17223 48 + 198278 TC----TTTTTTTCAtttttaaaattctgttag--aatatgaataacataaaac s panTro5.chr18 64969644 48 + 78221452 TC----TTTTTTTCAtttttaaaattctgttag--aatatgaataacataaaac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64092108 47 + 77229886 TC-----TTTTTTCAtttttaaaattctgttag--aatatgaataacataaaac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5311139 47 + 17472758 TC-----TTTTTTCAtttttaaaattctgttag--aatatggataacataaaac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139350106 50 - 152096393 TC--TTTTTTTTCCAtttttaacattctgttag--aatatgaataacataaaac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57304707 51 + 70235451 TC-TTTTTTTTTCCAtttttaaaattctgttag--aatattaataacataaaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62996121 51 - 75711847 TC-TTTTTTTTTCCAtttttaaaattctgttag--aatattaataacataaaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13548827 52 - 18804593 TCTTTTTTTTTTCCAtttttaaaattctgttag--aatattaataacataaaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13165632 51 + 18905526 TC-TTTTTTTTTCCAtttttaaaattctgttag--aatattaataacataaaac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59995293 51 - 72318688 TC-TTTTTTTTTCCAtttttaaaactctgttag--aatattgataacataaaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 329316 51 - 1517660 TC-TTTTTTTTTCCAtttttaaaattctgttag--aatattaataacataaaac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3429129 52 + 6513552 TCTTTTTTTTTTCCAtttttaaaattctgttag--aatattaataacataaaac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105208912 50 + 117903854 TT--TTGTTTTTCCAATTTTAAaactgtggtgg--aatgtgaataacatacaaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19400335 50 - 31320352 TC--TTGTTTTTCCAtttttaaaattgtgatgg--aatatgaataacataaaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1589480 50 + 2203405 TC--TTGTTTTTCCAtttttaaaattgtggtgg--aatatgaataacatagaaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3545838 50 - 14941987 TC--CTGTTTTTCCAtttttaaaattgtgatgg--aatatgaataacaaaaaaa i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112273673 53 - 122678785 TC-ATTCCTTTTTTATCTGTGCATTTTGATCAGGAAATAGGACTACAAAAGAAC i canFam3.chr1 C 0 I 205 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 437051 0 - 2150887 C e otoGar3.GL873546 11205458 2397 - 20685099 I a score=2649690.000000 s hg38.chr18_GL383571v1_alt 17271 295 + 198278 ttaccgtcttaaccattttaagtgtacagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcgatcttcatctattttcaacttgaaaaatt-aaattctatactcattaaataccaactttccagtactccaatcccttatgccctggaaaccaccattctacttttcttctgtatga-ttttgactat-----tcccctcttatctgtggaggatctgttccaagctccccagt---------------------------------------------------------ggatgtctgaaactaagcatagtactgaagccaatatat----aatgtttttc s panTro5.chr18 64969692 294 + 78221452 ttaccgtcttaaccattttaagtgtacagttcagttgtattaaataca-ttataatgttgtgcaagcattaccaccatcgatcttcatctattttcaacttgaaaaatt-aaattctatacccattaaataccaactttccagtactccaatcccttatgccctggaaaccaccattctacttttcttctgtatga-ttttgactat-----tcccctcttatctgtggaggatctgttccaagctcgccaat---------------------------------------------------------ggatgtctgaaactaagcatagtactgaagccaatatat----aatgtttttc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64092155 294 + 77229886 ttaccgtcttaaccattttaagtgtacagttcagttgtattaaataca-ttataatgttgtgcaagcattaccaccatcgatcttcatctattttcaacttgaaaaatt-aaattctatacccattaaataccaactttccagtactccaatcccttatgccctggaaaccaccattctacttttcttctgtatga-ttttgactat-----tcccctcttatctgtggaggatctgttccaagctcgccaat---------------------------------------------------------ggatgtctgaaactaagcatagtactgaagccaatatat----aatgtttttc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5311186 295 + 17472758 ttaccatcttaaccattttaagtgtacagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcaatcttcatctattttcaacttgaaaaatt-aaattctatacccattaaataccaactttccagtactccaatcccttatgccctggaaaccaccattctacttttcttctgtatga-ttttgactat-----tcccctcttatctgtggaggatctgttccaagctccccaat---------------------------------------------------------ggatgtctgaaactaagcatagtactgaagccaatatat----aatgtttttc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139350156 298 - 152096393 ataccatcttaaccattttaagtgtacagttcagttttattaaatacatttataatgttgtacaagcattaccaccatcaatcttcatctactttcaacttgaaaaactgaaattctacacccattaaataccagctttccagtactccaaccccttatgccctggaaaccaccattctacttttcttctgtatga-ttttgactatagtagtcccctcttatctgtggaggatctgttccaagctccccaat---------------------------------------------------------ggatgtctgaaactaagtatagtactgaagccaatat-------atgcttttc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57304758 302 + 70235451 ttaccaccttaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcgatcttcatctattttcatcttgaaaaactgaaattctacacctattaaataccaactttccagtagtttaaccccttatgccctgaaaaccaccattctacttttcttctgtatgacttttgactaTagtagttccctcttgtctgtggaggatctgttccaagctccccaat---------------------------------------------------------ggatgtctgaagctaagcatagtactgaagccaatatat----aatgtttttc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62996172 302 - 75711847 ttaccaccttaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcgatcttcatctattttcatcttgaaaaactgaaattctacacctattaaataccaactttccagtagtttaaccccttatgccctgaaaaccaccattctacttttcttctgtatgactttTGACGATagtagttccctcttgtctgtggaggatctgttccaagctccccaat---------------------------------------------------------ggatgtctgaagctaagcatagtactgaagccaatatat----aatgtttttc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13548879 302 - 18804593 ttaccaccttaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcgatcttcatctattttcatcttgaaaaactgaaattctacacctattaaataccacctttccagtagtttaaccccttatgccctgaaaaccaccattctacttttcttctgtatgacttttgactaTagtagttccctcttgtctgtggaggatctgttccaagctccccaat---------------------------------------------------------ggatgtctgaagctaagcatagtactgaagccaatatat----aatgtttttc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13165683 302 + 18905526 ttaccaccttaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcgatcttcatctattttcctcttgaaaaactgaaattctatacctattaaataccaactttctagtagtttaaccccttatgccctgaaaaccatcatcctacttttcttctgtataatttttgactacagtagttccctcttgtctgtggaggatctgttccaagcttcccaat---------------------------------------------------------ggatgtctgaagctaagcatagtactgaagccaataaat----aatgtttttc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59995344 299 - 72318688 ttaccaccttaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccattgatct---tctattttcatcttaaaaaactgaaattctacaaatattaaataccaactttccagtagtttaaccccttatgccctgaaaaccaccattctacttttcttctgtatgatttttgactaTagtagtttcctcttgtctgtggaggatctgttccaagctccccaat---------------------------------------------------------ggatgtctgaagctaagcatagtactgaagccaatatat----aatgtttttc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 329367 302 - 1517660 ttaccaccttaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccatcgatcttcatctattttcctcttgaaaaactgaaattctacacctattaaataccaactttctagtagtttaaccccttatgccctgaaaaccatcattctacttttcttctgtatgatttttgactacagtagttccctcttgtctgtggaggatctgttccaagcttcccaat---------------------------------------------------------ggatgtctgaagctaagcatagtactgaagccaataaat----aatgtttttc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3429181 306 + 6513552 ttaccaccgtaaccatcttaagtgtatagttcagttgtattaaatacatttataatgttgtgcaagcattaccaccattgatcttcatctattttcatcttgaaaaactgaaattctacacctattaaataccaactttccagtagttcaaccccttatgccctgaaaaccaccattctacttttcttctgtatgatttttgactaTagtagttccctcttatctgtggaggatctgttccaagttccccaat---------------------------------------------------------ggatgtctgcagctaagcatagtactgaagccaatatatataaaatgtttttc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105208962 347 + 117903854 ttaccatcttaaccattttaagtgtactgttcagtgatattaaatgcatttataatgttgtgcaaccaataccaccatctatcttcatctattttcatctggaaaatctaaaattctatacgcattaaatgccaatgttccagtactccatccccttctgccctgaaaaccaccattctactttttgtctgtatga-ttttgaTGATagtagtctcctctt-----------acctgttccaagctccctagtggatgtctgaaactaagcaaagtaataaaaccattgtgtagtaagttttttcctagcggatgtctgaaactaagcatagtactgaaaccattatgt----aatatgtttt i calJac3.chr13 C 0 I 3 s saiBol1.JH378121 19400385 290 - 31320352 ttaccatcttaaccatgttaagtgtacagttcagtgatattaaatacatttataatgttgtgcaaccaataccaccatctatcttcatctattttcatctggaaaatctaaaattctatacccattaaatgccaactttccagtagtccatccccttatgccctgaaaaccatcaatctacttttcgtctgtatga-ctttgaTGATagtagtcttctctt-----------atctgttccaagctccctagt---------------------------------------------------------ggatgtctgaaactaagcatagttctgaaaccattttct----aatatgtttt i saiBol1.JH378121 C 0 I 3 s cebCap1.NW_016107689v1 1589530 288 + 2203405 ctaccatcttagccatgttaagtgtacagttcagtgatattaaatacatttataatgttgtgcaaccaataccaccatctatcttcatctactttcatctggaaaatctaaaattctatatccataaaatgccaactttccagtactccattcccttatgccctgaaaaccaccattctactttttgtctgtatga-ttttgaTGATATCagtctcctctt-----------atctgttccaagctccctagt---------------------------------------------------------ggc--tctgaaactaagcatagtactgaaaccattatgt----aatatgtttt i cebCap1.NW_016107689v1 C 0 I 3 s aotNan1.NW_018502140v1 3545888 290 - 14941987 ttaccatcttaaccattttaagtgtacagttcaatgatattaaatacatttataatgttgtgcaaccaataccaccatctatcttcatctattttcatctggaaaatctaaaattctatatccattaaatgccaactttccagtactccatctccttatgccctgaaaaccaccattctacttttcgtctgtatga-ttttgaTGATagcagtctcttctt-----------atctgttccaagctccctagt---------------------------------------------------------gggtacctgaaactaagcatagtactgaaaccattgtgt----agtatgtttt i aotNan1.NW_018502140v1 C 0 I 63 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 437051 0 - 2150887 C e canFam3.chr1 112273726 205 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=54043.000000 s hg38.chr18_GL383571v1_alt 17566 13 + 198278 ctatacatacata s panTro5.chr18 64969986 13 + 78221452 ctatacatacata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64092449 13 + 77229886 ctatacatacata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5311481 13 + 17472758 ctatacatacata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139350454 13 - 152096393 ctatacatacata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57305060 13 + 70235451 ctagacatacata i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62996474 13 - 75711847 ctagacatacata i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13549181 13 - 18804593 ctagacatacata i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13165985 13 + 18905526 ctagacatacata i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59995643 13 - 72318688 ctagacatacata i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 329669 13 - 1517660 ctagacatacata i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3429487 13 + 6513552 ctagacatacata i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105209312 2 + 117903854 ct----------- i calJac3.chr13 I 3 C 0 s saiBol1.JH378121 19400678 2 - 31320352 ct----------- i saiBol1.JH378121 I 3 C 0 s cebCap1.NW_016107689v1 1589821 2 + 2203405 ct----------- i cebCap1.NW_016107689v1 I 3 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 437051 0 - 2150887 C e canFam3.chr1 112273726 205 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3546178 63 - 14941987 I a score=9953380.000000 s hg38.chr18_GL383571v1_alt 17579 1081 + 198278 tttatgatagagtttaatttataaattaggaaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaac--ggattactcgaatgcaagcattgtgatactgtgacagctgatctacttgagtggggaaagcagcataaaagatagctattgggtactggacttaatacctgggtattaatgaaataatatgtacaacaaacccctgtgacacacgtttacctctgtaacaaaccttcacatgtaccccc-aacctaaaataaaagtt----aaaaaaaaggacggttgaactgataaccaagatggctgctaagtgactaactaatgggtgtaggtagcatatacagggtggacaaagacatgatttggatcccaggaagaagggaacaagatgatgcaagatttgatcaggctactcagaaccatgtgcaacttaaaacttattctggaactatctgatatgttttggcagtatccccacccaaatctcaccttgaattgtcatgatccccatgtattaagcaccgggccacgtggagataattggatcatgggagtagtttcccccatactgttcttgcggtagtgaataagtctcatgagatctgatggtt---ttataaatgggagttctcctgcataagttctcttgcctgccaccatgtaaaacgtgactttgctactcctttgccttctgccatgattatgaggcctccccagccatgtggaagtgttagttgattaaa---ctttgctttatcaattatccagtcttgggtatgtctttgttgccagcatgagaacagactaatacactatgaatttaacattttcaggtcgtagttgaccacaggtaaacaaaacctctgaaagtacaaccacag-ataaggggggataactgTCTTCTAATAacttcacatcagtgaaatcataaagtatttgttcttctgtgactggcttgttttgctaagcataatgtcctcaaggttcatccatgttgtagtgtgtgtcagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------cacatttttgctttt s panTro5.chr18 64969999 1082 + 78221452 tttatgatagagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaat--ggattactcgaatgcaagcattgtgatactgtgacagctgatctacttgagtggggaaagcagcgtaaaagatagctattgggtactgggcttaatacctgggtattaatgaaataatatgtacaacaaacccctgtgacacacgtttacctctgtaacaaaccttcacatgtaccccc-aacctaaaataaaagtt---aaaaaaaaaggacggttgaactgataaccaagatggctgctaagtgactaactaatgggtgtaggtagcatatacagggtggacaaagacatgatttggatcccaggaagaagggaacaagatgatgcaagatttgatcaggctactcagaaccatgtgcaacttaaaacttattctggaattatctgatatgttttggcagtatccccacccaaatctcaccttgaattgtcttgatccccatgtattaagcaccaggccatgtggagataattgaatcatgggagtagtttcccccatactgttcttgcggtagtgagtaagtctcatgagatctgatggtt---ttataaatgggagttctcctgcataagttctcttgcctgccaccatgtaaaacgtgactttgctactcctttgccttctgccatgattatgaggcctccccagccatgtggaagtgttagttgattaaa---ctttgctttatcaattatccagtcttgggtatgtctttgttaccagtatgagaacagactaatacactatgaatttaacattttcaggtcgtagttgaccacaggtaaacaaaacctctgaaagtacaaccatag-ataaggggggataactgTCTTCTAATAacttcacatcagtgaaatcataaagtatttgttcttctgtgactggcttattttgctaagcataatgtccttaaggttcatccatgttgtagcgtgtgtcagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------cacatttttgctttt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64092462 1081 + 77229886 tttatgatagagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaac--ggattactccaatgcaagcattgtgatactgtgacagctgatctacttgagtggggaaagcagcgtaaaagatagctattgggtactgggcttaatacctgggtattaatgaaataatatgtacaacaaacccctgtgacacacgtttacctctgtaacaaaccttcacatgtaccccc-aacctaaaataaaagtt----aaaaaaaaggacggttgaactgataaccaagatggctgctaagtgactaactaatgggtgtaggtagcatatacagggtggacaaagacatgatttggatcccaggaagaagggaacaagatgatgcaagatttgatcaggctactcagaaccatgtgcaacttaaaacttattctggaattatctgatatgttttggcagtatccccacccaaatctcaccttgaattgtcttgatccccatgtattaagcaccaggccatgtggagataattgaatcatgggagtagtttcccccatactgttcttgcggtagtgagtaagcctcatgagatctgatggtt---ttataaatgggagttctcctgcataagttctcttgcctgccaccatgtaaaacgtgactttgctactcctttgccttctgccatgattatgaggcctccccagccatgtggaagtgttagttgattaaa---ctttgctttatcaattatccagtcttgggtatgtctttgttaccagtatgagaacagactaatacactatgaatttaacattttcaggtcgtagttgaccacaggtaaacaaaacctctgaaagtacaaccatag-ataaggggggataactgTCTTCTAATAacttcacatcagtgaaatcataaagtatttgttcttctgtgactggcttattttgctaagcataatgtccttaaggttcatccatgttgtagcgtgtgtcagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------cacatttttgctttt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5311494 1081 + 17472758 tttatcatagagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaatTGGCCACCTGAGTTAAAC--ggattactcgaatgcaagcattgtggtactgtgacagctgatctacttgagtggggaaagcagcataaaagatagctattgggtactgggcttaatacctgggtattaatgaaataatatgtacaacaaacccctgtgacacacgtttacctctgtaacaaaccttcacatgtatcccc-aacctaaaataaaagtt----aaaaaaaaggacggttgaactgataaccaagatggctgctaagtgactaactaatgggtgtaggtagcatatacggggtggacaaagacatgatttggatcccaggaagaagggaacaagatggtgcaagatttgatcaggctactcagaaccatgtgcaacttaaaacttattctggaactatctgatatgttttggcagtatccccacccaaatctcaccttgaattatcatgatccccatgtattaagcaccgggccacatggagataattgaatcatgggagtagtttcccccatactgttcttgcggtagtgaataagtctcatgagatctgatggtt---ttataaatgggagttctcctgcataagttctcttgcctgccaccatgtaaaatgtgactttgctactcctttgccttctgccatgattatgaggcctccccagccatgtggaagtgttagttgattaaa---ctttgctttatcaattatccagtcttgggtatgtctttgttaccagcatgagaacagactaatacactatgaatttaacattttcaggtcgtagtggaccacaggtaaacaaaacctctgaaagtacaaccacag-ataaggagggacaactgTCTTCTAATAacttcacatcagtgaaatcataaagtatttgttcttccgtgactggcttattttgctaagcataatgtcctcaaggttcatccatgttgtagcgtgtgtcagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgcata----tat--------cacatttttgctttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139350467 1076 - 152096393 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccaCCtgagttaaactgggattacttgaatgcaagcattgtgataccgtgacagttgatctacttgagtggggagagtagcataaaagataactattgggtactgggcttaatacctggg---tgatgaaataatatgtacaacaaacccctgtgacacatgtttacctctgtaacaaaccttcacatgtaccccc-aacctaaaataaaagt-----aaaaaaaaagacagttgaactgataaccaagatggctgctaagtg----actaatgggtgtaggtagcatatacagcatggacaaagacatgattcgaatcccaggaaggagggaacaagatgacgcaaggtttgatcaggctactcagaaccgtgtgcaacttaaaacttattctggaactatctgatccgttttggctatgtccccacccaaatctcaccttgaattgtcatgatccccatgtattaagcgccgggccaggtggagataattgaatcatgggggtagtttcccccatagtgttcttgcagtaatgaataagtctcatgagatctgatggtt---ttataaatgggagttctcctgcaaaagttctcttgcccgccacca-gtaaaacatgactttgctactcctttgccttctgccgtgattgtgaggcctccccagccatgtggaagtgtgaattgattaaaattctttgctttatcaagtatccagtcttgggtatgtctttgttaccaacatgagaacagactaacacaccatgaatttaacattttcgggtcgtagttgaccacaggtaaacaaaacctctgaaagtacaaccacag-ataaggggggataactgTCTTCTAATAacttcacatcagtgaaatcataaagtatttgttcttccgtgactggcttattttgctgagcataatgtcctcaagtttcatccatgttgtagcgtgtgtaagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------caca-ttttgctatt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57305073 1081 + 70235451 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaattgggattactcaaatgcaagcattgtgatactgtgacagttgatctatttgagcagggagagcagcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatgtacaacaaacgcctgggacatgtgtttacctctgtaacagaccttcacatgtacccctaaacctaaaataaaagtt----aaaaaataggacagttgaactgataacaaagatggctgctaaatgacaaactaataggtgtaggtaacatatacagcacggacaaagacatgatttggatccaaggaaggagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattctggaactatctgatatgttttggcagtgtccccatccaaatctcaccttgaattgtcatgatctgcatgtgttaagtgctgggacaggtggagataattgaatcatgggggtagtttcccccatactgttcttgtagtagtgaataagtctcatgagatctgatcgttttattataaatgagagttcccctgcataagctctctttcttgcccccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccatgtagaagtgggggctgattaaacttatttgctttatcaattatccagtcttgggtacgtcattgttaccagcatgagaacaaactaatacactatcaatttaacattttcaggtcatagttgaccacaggtaaacaaaacctctgaaagtacaaccacagtataagtggggacaacCAtattctaataacttcatatcagtgaaatcataaaatatttgctcttccgtgactagtttatttcgctgagcataatgtcctcaaagttcatccatgttgtagcacgtgtcagaatttcctttctttaaaggatgcataatattttattg------------------------------------------ta----cat--------caca-ttttgcctat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62996487 1081 - 75711847 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccaCCtgagttaaattgggattactcaaatgcaagcattgtgatactgtgacagttgatctatttgagcagggagagcagcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatgtacaacaaacccctgggacatgtgtttacctctgtaacagaccttcacatgtacccctaaacctaaaataaaagtt----aaaaaataggacagttgaactgataacaaagatggctgctaaatgacaaactaataggtgtaggtaacatatacagcacggacaaagacatgatttggatccaaggaaggagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattctggaactatctgatatgttttggcagtgtccccatccaaatctcaccttgaattgtcatgatctgcatgtgttaagtgctgggacaggtggagataattgaatcatgggggtagtttcccccatactgttcttgtagtagtgaataagtctcatgagatctgatcgttttattataaatgagagttcccctgcataagctctctttcttgcccccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccacgtagaagtgggggctgattaaacttatttgctttatcaattatccagtcttgggtacgtcattgttaccagcatgagaacaaactaatacactatcaatttaacattttcaggtcatagttgaccacaggtaaacaaaacctctgaaagtacaaccacagtgtaagtggggacaacCAtattctaataacttcatatcagtgaaatcataaaatatttgctcttccgtgactagtttatttcgctgagcataatgtcctcaaagttcatccatgttgtagcatgtgtcagaatttcctttctttaaaggatgcataatattttattg------------------------------------------ta----tat--------caca-ttttgcctat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13549194 1081 - 18804593 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaattgggattactcaaatgcaagcattgtgatactgtgacagttgatctatttgagcagggagagcagcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatgtacaacaaacccctgggacatgtgtttacctctgtaacagaccttcacatgtacccctaaacctaaaataaaagtt----aaaaaataggacagttgaactgataacaaagatggctgctaaatgacaaactaataggtgtaggtaacatatacagcacggacaaagacatgatttggatccaaggaaggagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattctggaactatctgatatgttttggcagtgtccccatccaaatctcaccttgaattgtcatgatctgcatgtgttaagtgctgggacaggtggagataattgaatcatgggggtagtttcccccatactgttcttgtagtagtgaataagtctcatgagatctgatcgttttattataaatgagagttcccctgcataagctctctttcttgcccccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccatgtagaagtgggggctgattaaacttatttgccttatcaattatccagtcttgggtacgtcattgttaccagcatgagaacaaactaatacactatcaatttaacattttcaggtcatagttgaccacaggtaaacaaaacctctgaaagtacaaccacagtataagtggggacaacCAtattctaataacttcatatcagtgaaatcataaaatatttgctcttccgtgactagtttatttcgctgagcataatgtcctcaaagttcatccatgttgtagcatgtgtcagaatttcctttctttaaaggatgcataatattttattg------------------------------------------ta----tat--------caca-ttttgcctat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13165998 1084 + 18905526 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaattgggattactcaaatgcaagcattgtgatactgtgacagttgatctatttgagcgggaagagcagcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatgtacaacaaacccctgggacatgtttttacctctgtaacagaccttcacatgtacccccaaacctaaaataaaagtt----aaaaaataggacagttgaactgataacaaagatggctgctaaatgacaaactaataggtgtaggtaacatatacagcacggacaaagacatgattcggatccaaggaaggagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattctggaactatctgatgtgttttggcagtgtccccatccaaatctcaccttgaattgtcatgatttgcatgtgttaagtgctgggacaggtggagataattaaatcatgggggtagtttcccccatactgttcttgtagtagtgaataagtctcatgagatctgatcatt---ttataaataagcgttcccctgcataagctctctttcttgcccccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccatgtagaagtgtgggctgattaaacttctttgctttatcaattatccagtcttgggtacgtcattgttatcagcatgagaacaaactaatacactatcagtttaacattttcaggtcatagttgaccacaggtaaacaaaacctctgaaagtacaaccacagtataagtggggacaacCAtattctaataacttcatatcagtgaaatcataaaatatttgttcttccgtgactagtttatttcgctgagcataatgtcctcaaggttcatccatgttgtagcatgtgtcagaatttcctttctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------caca-ttttgcctat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59995656 1084 - 72318688 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccaCCtgagttaaattgggattactcaaatgcaagcattgtgatactgtgacagttgatctatttgagcggggagagctgcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatgtacaacaaacccctgggacatgtgtttacctctgtaacagaccttcacatgtacccccaaacctaaaataaaagtt----aaaaaataggacagttgaactgataacaaagatggctgctaaatgacaaactaataggtgtaggtaacatatacagcatggacaaagacatgatttggatccaaggaacgagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattccggaaccatctgatatgttttggcagtgtccccatccaaatctcaccttgaattgtcatgatctgtatgtgttaagcactgggccaggtggagataattgaatcatggggttagtttcccccatactgttcttgtagtagtgaataagtctcatgagatctgatcgtt---ttataaatgagagttcccctgcataagctctctttcttgcccccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccatgtagaagtgtgagctgattaaacttctttgctttatcaattatccagtcttgggtacgttattgttaccagcatgagaacaaactaatacactatcaatttaacattttcaggtcatagttgaccacaggtaaacaaaacctctgaaagtacaaccacagtataagtggggacaacCAtattctaataacttcatatcagtgaaatcataaaatatttgttcttccgtaactagtttatttctctgagcataatgtcctcaaggttcatccatgttatagcatgtgtcagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------caca-ttttgcctgt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 329682 1084 - 1517660 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaattgggattactcaaatgcaagcattgtgatactgtgacagttgatctatttgagcgggaagagcagcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatgtacaacaaacccctgggacatgtttttacctctgtaacagaccttcacatgtacccccaaacctaaaataaaagtt----aaaaaataggacagttgaaatgataacaaagatggctgctaaatgacaaactaataggtgtaggtaacatatacagcacggacaaagacatgattcggatccaaggaaggagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattctggaactatctgatgtgttttggcagtgtccccatccaaatctcaccttgaattgtcatgatttgcatgtgttaagtgctgggacaggtggagataattaaatcatgggggtagtttcccccatactgttcttgtagtagtgaataagtctcatgagatctgatcatt---ttataaatgagggttcccctgcataagctctctttcttgcccccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccatgtagaagtgtgggctgattaaacttctttgctttatcaattatccagtcttgggtacgtcattgttatcagcatgagaacaaactaatacactatcagtttaacattttcaggtcatagttgaccacaggtaaacaaaacctctgaaagtacaaccacagtataagtggggacaacCAtattctaataacttcatatcagtgaaatcataaaatatttgttcttccgtgactagtttatttcgctgagcataatgtcctcaaggttcatccatgttgtagcatgtgtcagaatttcctttctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------caca-ttttgcctat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3429500 1081 + 6513552 tttatgataaagtttaatttataaattaggcaccataagagattaacaacaattactagtaataaaattgaccacctgagttaaattgggattagtcgaatgcaagcattgtgatactgtgacagttgatctatttgagggtggagagtagcataaaagataactattgggtactggacttaatatgtggg---tgatgaaataatatggacaacaaacccctgggacatgtgtttacttctgtaacagaccttcacatgtacccccaaacctaaaataaaagtt----aaaaaataggacagttgaactgataacaaagatggctgctaaatgactaactaataggtgtaggtaacatatacagcacggacaaagacatgattcggatccaaggaaggagggaacaagatgttgcaagatttgatcaggctactcagaaccatttgcaacttaaaacttattctggaactatctgatatgttttggcagtgtccccacccaaatctcaccttgaattgtcatgatctgcatgtgttaagtgctgggccaggtggagataattgaatcatgggggtagtttcccccatcctattctt---gtagtgagtaagtctcatgagatctgatggtt---ttatagatgagagttcccctgcacaagctctctttcttgcccccatgtaaaatgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccatgtagaagtgtgagctgattaaacttttttgctttatcaattatccagtcttgggtacgtcattgttaccagcatgagaacaaactaatacactatcaatttaacattttcaggtcatagttgaccacaggtaaacaaaacctctggaagtacaaccacagtataagtggggacaacCAtattctaataccttcatatcagtgaaatcataaaatatttgttcttccgtgactagcttattttgctgagcataatgtcctcaaggttcatagatgttgtagcatgtgtcagaatttccttcctttaaaggatgcataatattttattg------------------------------------tatgtata----tat--------caca-ttttgcctat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105209314 1082 + 117903854 tttatgataaagtttaatttacaaattaagtaccataaaagattaacaacaattattagtaataaaattgatcgattgagttaagttggggttactggaatgcaagcattgtgatactgtgacagctgatctacttcagtgtggacagtagcataaaagataactattgggtactgggcttaatacctggg---tgatgaaataatatgtacgacaaacccctatgacacgtgtttacctatgttacaaacctttgcctgtacccccaaacctaaaataagtgtt----aaaaaaaaggacagttgaactgataaccaagatggctgctaagtg----gctaacaggtgtgcataacatatacagcatggataaagagatgattcagatcccagaaaggagggaataagatgatgcaagatttgatcaggggactctgagtggtttgcaacttgaaacttattctggaattatctggcatgttgtggctgtgtccccacacagatctcaccttgaattgtaataatccccacatgttaaaggctgggccaagtggagataattgaatcatgggggtagtttcccccatactgtttttgcaaaagtgaataaatcaaatgagatctgatggtt---ttatgcgtgggagttcccctgcacatgctctcctacatgccaccatgtaaaacgtgattttgctacccctttgccttctgccatgattgtgaggcctcccaagccacgtggaattaggagttgattagacttctttgctttgtaaattatccaatccttagtatgtcttttttagcagtatgagaacagactaatacactgtcaattttatattttcggatcgtagttcaccacacgtaaacaaaacctctgaaagtacacccacag-ataagggggaacaactgTATTCTGATAactttatataagtgaaatcataaagcatttg---ttctgtgactggcttattttgcaaagcataatggcctcaaggtt-atccatgtcatagtgtgtgtcag-atttccttcctttaaaggatccattgtattttatta------------------------------------catatata----tatctctcacacaca-ctttgcttat i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19400680 1066 - 31320352 tttatgataaagtttaatttacaaattaagtaccataaaagattaacaacaattattagtaataaaattgatcgattgagttaagttggggttactggaatgcaagcattgtgatactgtgacagctgatctacttcagc-------atcacataaaagataactattgggtactgggcttaatacctggg---tgatgaaataatatgtacaacaaacccctatggcatgtgtttacctatgttacaaaccttcacctgtacccccaaacctaaaataaatgtc-----aaaaaaaggacagttgaactgataaccaagatggctgctaagtg----gctaacaggtgtgcataacatatacagcatggataaagagatgattcggatcccaggaaggagggaacaagatgatgcaagatttgatcaggctactcagaatggtgtgcaacttgaaacttatTCTGGAACTATCTGGTAggttgtggctgtgtccccacacagatctcaccttgaattttaataatccccatgtgttaaaggctgggccaggtggagataattgaatcatgggggtagtttcccccatactgttgttgcgatagtgaatacatctcataagatctgatgatt---ttatacatggaagttcccctgcatgagctctcttgcatgccaccatgtaaaacatga-----------ctttgccttctgccatgattatgaggcctccccagccacatggaattatgagttgattaaaattctttgctttgtaaattatccagtctttagtatgtctttgttagcagtatgagaacagactaatgcaCTGtcaatttaatattttcagattgtagttcaccacaggtaaacaaaacctctgaaagtacaccgacag-ataaggggaaatagctgTCTTCTGATAactttatatatgtgaaatcataaagtatttgttcttctgtgactggcttattttgcagagtataatggcctcaaggtt-atccatgttgtagtgtgtgtcag-atttcctttctttaaaggatccatagtattttgttg------------------------------------tatatata----tatatatatctcaca-ctttgcttat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1589823 1070 + 2203405 tttatgataaaatttaatttacaaattaaataccataaaagattaacaacaattattagtaataaaattgatcgattgagttaagttggggttactggaatgcaagcattgtgatactgtgacagctgatctacttcagcgtggagagtagcataaaagataactattgggtactgggcttaatacctggg---tgatgaaataatatgtacaacaaacccctatgacacatgtttacctatgttacaaaccttcacctgtacccccaaatctaaaataaatgtaaaaaaaaaaaaaggacagttgaactgataaccaagatggctgctaagta----gctaacaggtgtgcctaacatatacagcgtggataaagagatgatttggatcccaggaaggagggaacaagatgatgcaagatttgatcaggctactcagaatcgtgtgcaacttgaaacttattctggaactatctggtatgttgtggctgtgtccccacacagatttcgccttgaattgtaataatccccatgtgttaaaggctgggccaggtggagataattgaatcatgagggtagtttcccccatactgttcttgtgatagtgagtaaatctcatgagatctgatggtt---ttatacatgggagttcccctgcacaagctctcttgcatgccaccatgtaaaacatga-----------ctttgccttctgccatgattgtgagacctccccagccacttggaattatgagtagattaaacttctttgctttgtaaattatccaatctttagtatgtctttgttagcagtatgaaaacagactaatacactgtcaatttaatattttcagattgtagttcaccacaggtaaacaaaacctctgaaagtatatcgacag-ataagggggaaaaactgTATTCTGATAactttatataagtgaaataaaaaagtatttgttcttcggtgactggcttattctgcagagcataatggcctcaaggtt-atccatgttgtagtg-------------cctttctttaaaggatccatagtattttattg------------------------------------tatatataattctgtatatatctcaca-ccttgcttat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3546241 1119 - 14941987 tttatgataaagtttaatttacaaattaagtaccacaaaagattaacaacaattattagtaataaaattgatcaactgagttaagttggggttactggaacgcaagaattgtgatactgtgacagttgatctacttcagcttggagagtagcataaaagataactattgggtactgggcttaatacctggg---tgatgaaataatatgtacagcaaacccctatgccatgtatttacctgtgttacaaaccttcacctgtacccccaaacctaaaataaatgtc---aaaaaaaaaggacagctgaactgataaccaagatggctgctaagtg----gctaacaggtatgtataacatatacagcatagataaagagatgattcagatcccaggaaggagggaacaagatgatgcaagatttgatcaggctactcagaatggtgtgcaacttgaaacttactctggaactatctggtatgttgtggctgtgtccccacacagatctcaccttgaattgtaataatccccacatgttaaaggctgggccaggtggagataattgaatcatgggggtagtttcccccatactgttctttcaatagtgaataaatctcatgagatttgatggtt---ttatacgtgggagttcccctgcacaagctctcttgcatgccaccatgtaaaacgtgactttgctactcctttgccttctgccatgattgtgaggcctccccagccacatggaattatgagttgattaaaattctttgctttataaattatccaatctttagtatgtcttttttagcagtatgagaacagactaatagactgtcaatttaatattttcagatcgtagttcaccacaggtaaacaaaacctcggaaagtacacccacgg-ataaggtggaacaactgTATTCTGATAactttatataagtgaaatcataaagtatttgttcttctgtgactggcttattttgcagagcataatggcctcaaggtt-atccatg---tagtgtgtgtcag-atttccttccttaaaaggatccatagtatattattgtgtgtgtgtgtgtatatatatatatatatatatatatatatatg----tatatatctctcaca-ccttgcttat i aotNan1.NW_018502140v1 I 63 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 437051 0 - 2150887 C e canFam3.chr1 112273726 205 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=1068410.000000 s hg38.chr18_GL383571v1_alt 18660 98 + 198278 tcattcatattttcacttctgcatttaggtCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG s panTro5.chr18 64971081 98 + 78221452 tcattcatattttcacttctgcatttaggtCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093543 98 + 77229886 tcattcatattttcacttctgcatttaggtCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312575 98 + 17472758 tcattcatattttcacttctgcatttaggtCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAAAT----------------------------AAAAGATTTATTTTAATTTTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351543 98 - 152096393 tcattcatATTTTCACTTCTGCATTTAGCTCAGAAAAGA---CTGAGATTCGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAAATATTTATTTTAATTTTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57306154 98 + 70235451 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGA-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 62997568 98 - 75711847 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGA-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13550275 98 - 18804593 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGA-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13167082 98 + 18905526 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGA-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTTATTTTAATTTTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59996740 98 - 72318688 tcattcatGTTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATATAT----------------------------AAAAGATTTATTTTAATTTTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 330766 98 - 1517660 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGA-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTGATTTTAATTTTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3430581 95 + 6513552 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---C--AGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAAAGATTT-TTTTAATTTTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105210396 98 + 117903854 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATGTAAATAGAT----------------------------AAATCATTTATTTTAATTTTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19401746 98 - 31320352 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAGAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAGTCATTTATTTTAATTTTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1590893 98 + 2203405 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAATCATTTATTTTAATTTTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3547360 98 - 14941987 tcattcatATTTTCACTTCTGCATTTTGGTCAGAAAAGA---CTGAGATTAGAACTTGC-AAGAACAAATTTAAATAGAT----------------------------AAATCATTTATTTTAATTTTTG i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 437051 130 - 2150887 TCATTTATTTTTGCAGGTCTACATTTTAGTTAGGGAAGAGGGCTAAGAAGAGAACTTTCAAAGAACAAGTTTAAATAGATGAAAAATATAGTCGTGAAGTGTTTCTGAGAAAGATTTATTGTAATTTTTG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e canFam3.chr1 112273726 205 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=321759.000000 s hg38.chr18_GL383571v1_alt 18758 32 + 198278 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA s panTro5.chr18 64971179 32 + 78221452 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093641 32 + 77229886 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312673 32 + 17472758 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351641 32 - 152096393 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57306252 32 + 70235451 ATAA-------AAATATTCCTTAGGA-ATGGTAAATATGA i rheMac8.chr18 C 0 I 2139 s macFas5.chr18 62997666 32 - 75711847 ATAA-------AAATATTCCTTAGGA-ATGGTAAATATGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13550373 32 - 18804593 ATAA-------AAATATTCCTTAGGA-ATGGTAAATATGA i macNem1.NW_012016688v1 C 0 I 2132 s cerAty1.NW_012001075v1 13167180 32 + 18905526 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59996838 32 - 72318688 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 330864 32 - 1517660 ATAA-------AAATATTCCTTAGGA-ATGCTAAATATGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3430676 39 + 6513552 ATAAAAATATCAAATATTGCTTAGGA-ATGCTAAATATGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105210494 32 + 117903854 ATTA-------AAAGATTCTTTAGGA-ATGCTATCTATGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19401844 32 - 31320352 ATAA-------AACGATTCCTTAGGA-ATGCTGTCTATGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1590991 32 + 2203405 ATAA-------AAAGATTCCTTAGGA-ATGCTATCTATGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3547458 32 - 14941987 ATAA-------AAAGATTCCCTAGGA-ATGCTATCTATGA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112273931 33 - 122678785 ataa-------ataaaatccttaaaaCATATTAAATATGT i canFam3.chr1 I 205 C 0 s dasNov3.JH575754 437181 29 - 2150887 GTGA-------AAAG---CCATTAAA-ATGCTAAATATGA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=51114.000000 s hg38.chr18_GL383571v1_alt 18790 7 + 198278 AACAAGG s panTro5.chr18 64971211 7 + 78221452 AACAAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093673 7 + 77229886 AACAAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312705 7 + 17472758 AACAAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351673 7 - 152096393 AACCCTA i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 62997698 7 - 75711847 CACCAGA i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13167212 7 + 18905526 AACCAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59996870 7 - 72318688 AACCAGA i chlSab2.chr18 C 0 I 2128 s manLeu1.NW_012106698v1 330896 7 - 1517660 AACCAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3430715 7 + 6513552 AACCAGA i colAng1.NW_012115433v1 C 0 I 2097 s calJac3.chr13 105210526 7 + 117903854 AACCAGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19401876 7 - 31320352 AACCAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1591023 7 + 2203405 AACCAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3547490 7 - 14941987 AACCAGG i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112273964 7 - 122678785 AACCAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 437210 7 - 2150887 AATCAGG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I e macNem1.NW_012016688v1 13550405 2132 - 18804593 I e rheMac8.chr18 57306284 2139 + 70235451 I a score=10035.000000 s hg38.chr18_GL383571v1_alt 18797 1 + 198278 G s panTro5.chr18 64971218 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093680 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312712 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351680 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 62997705 1 - 75711847 G i macFas5.chr18 C 0 I 2134 s cerAty1.NW_012001075v1 13167219 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 I 2131 s chlSab2.chr18 59999005 1 - 72318688 G i chlSab2.chr18 I 2128 C 0 s manLeu1.NW_012106698v1 330903 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 I 2129 s colAng1.NW_012115433v1 3432819 1 + 6513552 G i colAng1.NW_012115433v1 I 2097 C 0 s calJac3.chr13 105210533 1 + 117903854 G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19401883 1 - 31320352 G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1591030 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3547497 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112273971 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 437217 1 - 2150887 G i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I e macNem1.NW_012016688v1 13550405 2132 - 18804593 I e rheMac8.chr18 57306284 2139 + 70235451 I a score=1820464.000000 s hg38.chr18_GL383571v1_alt 18798 175 + 198278 ATGTGTTGTTGTTTTGCTCATTTATTGGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCATTATATAGTATTGATGTGTCCACAGTGATTTATAAGAAAAAAAGAAACTGAATAGAACACCAGCTCTC-TCACCCAAGTTGACCAAAA s panTro5.chr18 64971219 175 + 78221452 ATGTGTTTTTGTTTTGCTCATTTATTAGCACTGTTGTTAGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCATTATATAGTATTGATGTGTCCACAGTGATTTATAAGAAAAAAAGAAACTGAATAGAACACCAGCTCTC-TCACCCAAGCTGACCAAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093681 175 + 77229886 ATGTGTTTTTGTTTTGCTCATTTATTAGCACTGTTGTTAGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCATTATATAGTATTGATGTGTCCACAGTGATTTATAAGAAAAAAAGAAACTGAATAGAACACCAGCTCTC-TCACCCAAGCTGACCAAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312713 175 + 17472758 ATGTGTTGTTGTTTTGCTCATTTATTGGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCATTATATAGTATTGATGTGTCCACAGTGATTTATAAGAAAAAAAGAAACTGAATAGGACACCAGCTCTC-TCACCCAAGCTGACCAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351681 175 - 152096393 ATGTGTTGTTGTTTGGCTCATTTATTAGCACTGTTGTTAGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCATTATATAGTATTGATGTGTCCACAGTGATTTATAAGAAAAAAAGAAACTGAATAGAACACCAGCTCTC-CCACCCAAGCTGACCAAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57308423 175 + 70235451 ATGTGTTGTTGTTTTGCTCATTTATTAGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCACTATATATTATTGATGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAGTAGAATGCCAACTGTC-TCCCCCAAGCTGACCAAAA i rheMac8.chr18 I 2139 C 0 s macFas5.chr18 62999840 175 - 75711847 ATGTGTTGTTGTTTTGCTCATTTATTAGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCACTATATATTATTGATGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAGTAGAATGCCAACTCTC-TCCCCCAAGCTGACCAAAA i macFas5.chr18 I 2134 C 0 s macNem1.NW_012016688v1 13552537 175 - 18804593 ATGTGTTGTTGTTTTGCTCATTTATTAGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCACTATATATTATTGATGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAGTAGAATGCCAACTCTC-TCCCCCAAGCTGACCAAAA i macNem1.NW_012016688v1 I 2132 C 0 s cerAty1.NW_012001075v1 13169351 175 + 18905526 ATGTGTTGTTGTTTTGCTCATTTATTAGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCACTATATATTATTGATGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAATAGAATGCCAACTCTC-TCCCCCAAGCTGACCAAAA i cerAty1.NW_012001075v1 I 2131 C 0 s chlSab2.chr18 59999006 175 - 72318688 ATGTGTTGTTGTTTCGCTCGTTTATTAGCACTGTTGTTAGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAACACTATATACTATTGCTGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAATAGAATGCCAACTCTC-TCCCCCAAGCTGACCAAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 333033 175 - 1517660 ATGTGTTGTTGTTTTGCTCATTTATTAGCACTGTTGTTGGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCACTATATATTATTGATGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAATAGAATGCCAACTCTC-TCCCCCAAGCTGACCAAAA i manLeu1.NW_012106698v1 I 2129 C 0 s colAng1.NW_012115433v1 3432820 175 + 6513552 ATGTGCTGTTGTTTTGCTCATTTATTAGCACTGTTGTTAGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGCACTATATACTATTGATGTGTCCATAGTGATTAATAAGAGAAAAAGAAACTGAATAGAATGCCAACTCTC-TCACCCAAGCTGACCAAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105210534 175 + 117903854 ATGTGCTTTTGTTTTGCTAATTTAGTAACACTGTTGTTAGGA--------TGCTGCTACCTGTGTTTATTTTGTGATATCAGAT----TTATAAAAAGTACTGTATACTATCGATCTGTTCATAGTGATTAATAAGAAAAAAAAAAACTCAATAGAACACCAGCTCTC-TCACCCAAACTCATCAAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19401884 174 - 31320352 ACGTGCTATTGTTTTGCTCATTTAGTAGCACTGTTGTTAAGA--------TGCTGCTACCTGTCTTTATTTTGTGCTATTAGAT----TTATAAAAAGTACTATATACTATTGATGTGTTCATAGTGATTAATAAG-AAAAAAGAACCTGAATAGAACATCAGCTCTC-TCATCCAAGCTGATCAAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1591031 175 + 2203405 ATGTGCTGTTGTTTTGCTCATTTAGTAGCATTGTTGTTAAGG--------TGCTGCTACCTGTCTTTATTTTGTGATATTAGAT----TTATAAAAAGTACTATATATTATTGATGTGTTCATAGTGATTAATAAGAAAAAAAGAAACTGAATAGAACACCAGCTCTC-TCATCCAAGCTGATCAAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3547498 175 - 14941987 ATGTGCTGTTGTTTTGCTAATTTAGTAGCACTGTTGTTAGGA--------TGATGCTACCTGTGTTTATTTTGTGATATTAGAT----TTATAAAAAGTACTATATACTATTGATGTGTTCATAGTGATTAATAAGAAAAAAAGAAACTCAATAGAACACTAGCTCTC-TCACCCAAGCTGATCAAAA i aotNan1.NW_018502140v1 C 0 I 348 s canFam3.chr1 112273972 133 - 122678785 ATGTACCAACACTTTGCTC--------------------------------------------TTTTCTTTTGTGATGCAAGATTGACTTAATGAAAGAGCAGTATACTAACGATGTGCTTGTGATGATTAA----AATAAAAGTAACT-------ATATTAATATTCTTCTCCTCAGGTAATCAAAA i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 437218 158 - 2150887 ATGTGTCATTGCTTTTCTCTTCTCTCTGCACTGCTGTCAGGACAGTCTTGCATTTCCACTTTTGTTTCTTTTGTGGCATAAGATTAGCTTAATGAAAGGGCTGTACACCGATGATGTGCCCACAT-----------------------------GAACATCAGCTCTC-TCATCCAAGTCAATCAAAA i dasNov3.JH575754 C 0 I 1 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=236569.000000 s hg38.chr18_GL383571v1_alt 18973 28 + 198278 CTTTGTGTGGGGCCATTGAGGATGCCCT s panTro5.chr18 64971394 28 + 78221452 CTTTGTGTGGGGCCATTGAGGATGCCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093856 28 + 77229886 CTTTGTGTGGGGCCATTGAGGATGCCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312888 27 + 17472758 C-TTGTGTGGGGCCATTGAGGATGCCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351856 28 - 152096393 ATTTGTGTGGGACCATTGAGGATGCCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57308598 28 + 70235451 ATTTGTGTGGGACCATTGAGAATGCCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63000015 28 - 75711847 ATTTGTGTGGGACCATTGAGAATGCCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13552712 28 - 18804593 ATTTGTGTGGGACCATTGAGAATGCCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13169526 28 + 18905526 ATTTGTGTGGGACCATTGAGAATGCCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59999181 28 - 72318688 ATTTGTGTGGGACCATTGAGAATGCCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 333208 28 - 1517660 ATTTGTGTGGGACCATTGAGAATGCCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3432995 28 + 6513552 ATTTGTGTGGGACCATTGAGAATGCCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105210709 28 + 117903854 ATACATGTAGGATCATTGAGGATGCACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19402058 28 - 31320352 ATATGTGTGGGATCATTGATGATGCACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1591206 28 + 2203405 ATACATATGGGATCATTGAGGATGCACT i cebCap1.NW_016107689v1 C 0 I 325 s canFam3.chr1 112274107 28 - 122678785 GTGTAGGTGGGACTATTTAGGATTATTT i canFam3.chr1 I 2 I 1 s dasNov3.JH575754 437377 23 - 2150887 ATTTGGGTGGGACCTTTCGGGAC----- i dasNov3.JH575754 I 1 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3547673 348 - 14941987 I a score=28318.000000 s hg38.chr18_GL383571v1_alt 19001 4 + 198278 TCAT s panTro5.chr18 64971422 4 + 78221452 TCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093884 4 + 77229886 TCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312915 4 + 17472758 TCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351884 4 - 152096393 TCAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57308626 4 + 70235451 TCAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63000043 4 - 75711847 TCAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13552740 4 - 18804593 TCAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13169554 4 + 18905526 TCAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59999209 4 - 72318688 TCAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 333236 4 - 1517660 TCAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3433023 4 + 6513552 TCAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105210737 4 + 117903854 TAAC i calJac3.chr13 C 0 I 305 s saiBol1.JH378121 19402086 4 - 31320352 TAAC i saiBol1.JH378121 C 0 I 321 s cebCap1.NW_016107689v1 1591559 4 + 2203405 tcac i cebCap1.NW_016107689v1 I 325 C 0 s canFam3.chr1 112274136 4 - 122678785 TAAG i canFam3.chr1 I 1 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 437400 0 - 2150887 C e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3547673 348 - 14941987 I a score=4452872.000000 s hg38.chr18_GL383571v1_alt 19005 446 + 198278 AGACTGATATTCTTTCTTTATGGAATAGTAGATAATGCACATTCTTCACATGAATAGGAGGACAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTGCCTTGGTAAATAGAAGTGTAGTGATCTGTCCAA-AAGTGAGAAGGAAATGAGAATCTAGACTGGGGAAGGCTCTCAATCTCTCTCCCACTGGAGAGAAGTACGGAAAGCTCTTCAGAGATTATTGTGAAATTGTCT----------TC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCAAGAGCTCAAGCAGT-----ATTTATATTTGTTAATAAATGAA-------TAAATGAATAC--CAAGTTGACAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------atgaatagcaaacat--------------ata---ttat--at--atatacacaacata---------------------------gtatatacaga--------ctgtata-------gcata---tacatgt-atctatagta-t s panTro5.chr18 64971426 447 + 78221452 AGACTGATATTCTTTCTTTATGGAATAGTAGATAATGCACATTCTTCACATGAATAGGAGGACAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTGCCTTGGTAAATAGAAGTGTAGTAATCTGTCCAA-AAGTGAGAAGGAAATGAGAATCTAGACCAGGGAAGGCTCTCAATCTCTCTCCCACTGGAGAGAGGTACAGAAAGCTCTTAAGAGATTATTGTGAAATTGTCT----------TC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGAGCTCAAGCAGT-----ATTTATATTTGTGAATAAATGAA-------TAAATAAATAC--CAAGTTGACAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------atgaatagcaaacat--------------ata---ttata-at--gtatacacaacata---------------------------gtatacacaga--------ctgtata-------gcata---tacatat-atctatagta-t i panTro5.chr18 C 0 C 0 s panPan2.chr18 64093888 447 + 77229886 AGACTGATATTCTTTCTTTATGGAATAGTAGATAATGCACATTCTTCACATGAATAGGAGGACAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTGCCTTGGTAAATAGAAGTGTAGTAATCTGTCCAA-AAGTGAGAAGGAAATGAGAATCTAGACCGGGGAAGGCTCTCAATCTCTCTCCCACTGGAGAGAAGTACAGAAAGCTCTTAAGAGATTATTGTGAAATTGTCT----------TC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGAGCTCAAGCAGT-----ATTTATATTTGTGAATAAATGAA-------TAAATAAATAC--CAAGTTGACAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------atgaatagcaaacat--------------ata---ttata-at--gtatacacaacata---------------------------gtatacacaga--------ctgtata-------gcata---tacatat-atctatagta-t i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5312919 448 + 17472758 AGACTGATATTCTTTCTTTATGGAATAGTAGATAATGCGCATTCTTCACATGAATAGGAGGACAGGAACTGTTTCAGAAAGTGGATAAAAGATTACAGA----AATGTGCCTTGGTAAATAGAATTGTAGTGATCTGTCCAA-AAGTGAGAAGGAAATGAGAATCTAGACTGAGGAAGGCTCTCAATCTCTCTCCCACTGGAGAGAAGTACGGAAAGCTCTTCAGAGATTATTGTGAAATTGTCT----------TC------TGTTCTTTGTCACAGAAGTAAT-ACTACATGTAGAACTGTATCAAGAGCTCAAGCAGT-----ATTTATATTTGTTAATAAATGAA-------TAAATGAATAC--CAAGTTGACAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------atgaatagcaaacat--------------ata---ttatatat--atatacacaacata---------------------------gtatatacaga--------ctgtata-------gcata---tacatgt-atctatagta-t i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139351888 450 - 152096393 AGACTGATATTCTTTCTTTATGGAATAGTAGATAGTGCATATTCTTCACATGAGTAGGAGGAGAGGAACAGTTTCAGAAAGTGGATAAAAGGTTACATT----AATGTGCCTTGGTAAAGAGAAGTGCAGT-ATCTGTCCAA-AAGTGAGAAGGAAGTGAGAATCTAGACTAGGGAAGGCTCTCAATCTCTCTCCCACTGGAGAGAAGTACAGAAAGCTCTTCAGAGATTATTGTGAAATTATCT----------TC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCAAGTGCTCAAGCAGT-----ATTTATATTTGTTAATAAATGAA-------TAAATGAATGC--CAAGTTGGCAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------atgaatagcaaacat--------------atatttttatatat--acatacacaacata---------------------------gtatatacaga--------ctgtata-------gcata---tacatat-atctatagta-t i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57308630 473 + 70235451 AGACTGATATGCTTTCTCTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGATAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACTGGAGGGAAGTCCAGAAAGCTCTTCAGAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTTAATAAATAAA-------TAAATGAATAC--CAAGTTGAAAT----------------TATATGTA-----A----------------------------TGTA---------GTAT-TACATA---------ATGAATAGCAAACAT--------------ATA---TTTT--at--atatttacaacata----tatgtacaaatatatgtacaTATGCATATACAGA--------CTGTATA-------GCATA---TGCATAT-ATCTATGGTA-T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63000047 473 - 75711847 AGACTGATATGCTTTCTCTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGATAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACTGGAGGGAAGTCCAGAAAGCTCTTCAGAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTTAATAAATAAA-------TAAATGAATAC--CAAGTTGAAAT----------------TATATGTA-----A----------------------------TGTA---------GTAT-TACATA---------ATGAATAGCAAACAT--------------ATA---TTTT--at--atatttacaacata----tatgtacaaatatatgtacatatgcatatacaga--------ctgtata-------gcata---tgcatat-ATCTATGGTA-T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13552744 473 - 18804593 AGACTGATATGCTTTCTCTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGATAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACTGGAGGGAAGTCCAGAAAGCTCTTCAGAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTTAATAAATAAA-------TAAATGAATAC--CAAGTTGAAAG----------------TATATGTA-----A----------------------------TGTA---------GTAT-TACATA---------ATGAATAGCAAACAT--------------ATA---TTTT--at--atatttacaacata----tatgtacaaatatatgtacatatgcatatacaga--------ctgtata-------gcata---tgcatat-ATCTATGGTA-T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13169558 473 + 18905526 AGACTGATATGCTTTCTCTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGATAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACTGGAGGGAAGTCCAGAAAGCTCTTCAGAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTTAATAAATAAA-------TAAATGAATAC--CAAGTTGAAAT----------------TATATGTA-----A----------------------------TGTA---------GTAT-TACATA---------ATGAATAGCAAACAT--------------ATA---TTTT--at--atatttacaacata----tatgtacaaatatatgtacaTATGCATATACAGA--------TGGTATA-------GCATA---CGCATAT-ATCTATGGTA-T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59999213 464 - 72318688 AGACTGATATGCTTTCTCTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGGTAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACTGGAGGGAAGTCCAGAAAGCTCTTCAGAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTTAATAAATAAA-------TAA---AATAC--CAAATTGAAAT----------------TATATGCA-----A----------------------------TGTA---------GTAT-TACATA---------ATGAATAGCAAACAT--------------ATA---TTTT--AT--ATATTTACAACATA----TATGTACAAATATatatacatatg------caga--------ctgtata-------gcata---tgcatat-ATCTATGGTA-T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 333240 473 - 1517660 AGACTGATATGCTTTCTCTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGATAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACTGGAGGGAAGTCCAGAAAGCTCTTCAGAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTTAATAAATAAA-------TAAATGAATAC--CAAGTTGAAAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------atgaatagcaaacat--------------ata---tttt--at--atatttacaacata----tatgtgcaaatatatgtacatatgcatatacaga--------ctgtata-------gcata---tgcatat-atctatGGTA-T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3433027 473 + 6513552 AGACTGATATTCTTTCTTTGTGGAATAGTAGATAATGCATATTCTTCACGTGAATAGGAGGGCAGGAACTGTTTCAGAAAGTGGATAAAAGGTTACAGA----AATGTTCCTTGGTAAGTAGAAGTGTAGTGATCTCTTCAG-AAGTAAGAAGGAAGTGAGAATCTAGACTGTGGAAGGCTCTCAATCTCTCTCCCACCGGAGGGAAGTCCAGAAAGCTCTTCAAAGATTATTGTGAAACTATCT------TACCTC------TGTTCTTTGTCACAGAAGTAAT-ACTACATCTAGAACTGTATCGAGTGCTCAAGGAGT-----ATTTATATTTGTCAATAAATAAA-------TGAATGAATAC--CAAGTTGAAAT----------------tatatgta-----a----------------------------tgta---------gtaa-tacata---------atgaatagcaaacat--------------gta---tttt--at--atatatacaacata----tatgtacaaatatatgtacatatgcatatacaga--------ctgtata-------gcata---tgcatat-atctatGGTA-T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105211046 469 + 117903854 AGACTGATATTCTTTCTTTATAGAATAATAGCTAATGCATATTCTTCACATGAATAGGAGGACAGAAACTGTTTCAGAAAGTGAATAAAATGTTACAGA----AATATGTCTTGGTAAATAGAAGCGGACTAATCTGCCCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGGAGAAGGTTTTCAATCTCTCTCCCACTGGAGAGAAGTCCAGAAAGCTCTTCAGAGATTATTGAAAAATTATCC------TACTTT------TGTTATTTGTCACAGAAGTAACAAATACATCTAGAACTGTACTGGATGCTCAGGGAGT-----ATTTATATTTGTTAATAAAT---------------GAATAC--CAAGTTGAAAT----------------TATATGTA-----ATTTAATTTCATATAATTTCCTATAATTGTGTA---------GTAT-TACACA---------ATAAATAGCACACAT--------------ATA---TTAT------ATATATACAACATA---------------------------GCATATATAGA--------TTGTACA-------GCATA---TGCATAT-ACCTAGAGTA-T i calJac3.chr13 I 305 C 0 s saiBol1.JH378121 19402411 445 - 31320352 AGACTGATATTCTTTCTTTATAGAATAATAGATAATGCATATTCTTCACATGACTAGGAGGACGGAAACTGTTTCAGAAAGTGAATAAAAGGTTACAGA----AATGTGTCTTGGTAAGTAGAATTGGAGTAATCTGCCCAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGGAGAAGGCTTTCAATCTCTCTCCCACTGGAGAAAAGTCCAGACAGCTCTTCAGAGATTATTGCAAAATTATCT------TACTTC------TGTTATTTGTCACAGAAATAACAAATATGTCTAGAACTTTACTGGGTGCTCAGGGAGT-----ATTTTTATTTGTTAATAAAT---------------GAATAC--CAACTTGAAAT----------------tatatgta-----a----------------------------tgta---------ttat-tatata---------ataaatagcacacat--------------ata---ttat--atacatatatacaacata---------------------------gtatatataga--------ttgtata-------gcata---tgcatat-acctataGTA-T i saiBol1.JH378121 I 321 C 0 s cebCap1.NW_016107689v1 1591563 436 + 2203405 AGACTGATA-TCTTTCTTTATAGAATAATAGATTATGTATATTCTTCACATGAATAGGAGGACAGAAACTGTTTCAGAAAGTGAATAAAAGGTTACAGA----AATGTGTCTTGGTAAATAGAAGTGGAGTAATCTGCCTAG-AAGTGAGAAGGAAGTGAGAATCTAGACTGGAGAAGGCTTTCAATCTCTCTCCTACTGGAGAGAAGTCCAGAAAGCTCTTCAGAGATTATTGCAAAATTATCT------TACTTT------TGTTATTTGTCACAGAAGTAACAAATACATCTAGAACTGTACTGGGTGCTCAGAGAGT-----ATTTTTATTTGTTAATAAAT---------------GAATAC--CAAGTTGAAAT----------------tacatata-----a----------------------------tgta---------gtat-tacata---------ataaatagcacacat--------------ata---tttt--at--atatatacaacata---------------------------gtatatataga--------ttgtata----------------GCATTT-ACCTATAGTA-T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3548021 443 - 14941987 AGACTGATATTCTTTCTTTACAGAATAATTGATAATGCATATTCTTCACATGAATAGGAGGACAGAAACTGTTTCAGAAAGTGAATAAAAGGTCACAGA----AATGTGTCTTGGTAAATAGAAGTGGAGTAATCTGCTCAG-AAGTGAGAAAGAACTGAGAATCTAGACTAGAGAAGGCTTTCAACCTTTTTCCCACTGGAGAGAAGTCCAGAAAGCTCTTCAGAGATTATTGCAAAATTATCT------CACTTT------TGTTATTTGTCACAGAAGTAACAAATACGTCTAGAACTGTACTGGGTGCTCAGGGAGT-----ATTTATATTTGTTAATAAAT---------------GAATAC--CAAGTTGAAAT----------------tatatgta-----a----------------------------tgta---------gtat-tacata---------ataaatagcacacat--------------ata---tttt--at--atatatacaacata---------------------------gtatatataga--------ttgtaca-------gcata---tgcatat-acctatagta-t i aotNan1.NW_018502140v1 I 348 C 0 s canFam3.chr1 112274140 518 - 122678785 AGACTGTCATTCTTTATTTATAGAATAGAAGATGA-----ATTCTTCACTTGAACAGGAAAGCAAGAATTATCGAAAAAGGTGTATAAGAGGTCACAGAGATGGATGTGTCTGGGCAAAGAGAAGGGCAGTTACCTGTCCAG-AAAGTGGAAGGAAATGAACACAAGTACTGG---AGGTTTTCAATGCCTTTCCAATAAGAAAAAAGTCCAGAAAGCTTTT-AAAAACTACTATGAAATTATCTA-----GAGGTCCTAAAGTGTTCCTTTCTACAAAAGTGACTAATATGCAAAGAATAGTATCCAGGGCACAGGAAGTGTTTAATTTGCATTTGTTAATGAATAAATGAATTTtaaatatatac--taaatatatatataaatatatagcatatatgtgtc-----a----------------------------tatataca---acatat-tacatt---------ctatata----ACAC--------------ATG---TAGT--GG--TTAAAAACTATATAATAGTGTGtatgtgtatatatacacacacatatatagc--------atatatatatatatatata---tatatat-atatataGTATT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 437400 491 - 2150887 --------ATTCCTTCATTTCATAAAAGAAGATAAGATGTATTCTTCAAAGGAGTAGGAGGGCAGGAGTTGCCTCAGAGTGTGGATAAAGCAACACAGA----GATGTACCTTG-TAAATAAGAGGGCAGTAATCTGTCCAGAAAGTGAGAAGGCAGTGAGAACATGGACTGG---AGGCTTTCCATTCGTCCTTAACTGGAGAAAAGTCCAGAAAGCTATTCAGAGACTATTCTAAAATTATCTAGAGGGAACAAA------GTTTCTTATTCACAGAAGAAAC-----------TGACAATGCCTAAGGCACAGGAAGTGTTACGTTTGTATTTGTTGAAAGAT----------TAAA-GATTACTATAAGTCTAAAT----------------tatatatgtattta----------------------------tgtatgcatgtatgtatATGCATATAGAGAGATAGAAAGAGAAAGCATGGGAGGGAACATGCATA---TACT--AT--ATATATAAAATGTA------------------------TTGCTATATATAAAATACTACTTTGTATG-------GTATATATTACATACAATGTATAGTA-T i dasNov3.JH575754 C 0 I 465 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=2154278.000000 s hg38.chr18_GL383571v1_alt 19451 213 + 198278 TAAAGATCTTGTAAAGTTGA-TATTTTTCAGTTAAATCTATTTAAATTGAATTTATTCCAAGATTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTATTCATTATAAATTACTAACGCCTAGGA-AGAAGATTTTAATTTCCATTATATCCTATATATCTTCCAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT s panTro5.chr18 64971873 213 + 78221452 TAAAGATCTTGTAAAGTTGA-TATTTTTCAGTTAAATCTATTTAAATTGAATTTATTCCAAGATTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTATTCATTATAAATTACTAATGCCTAGGA-AGAAGATTTTAATTTCCATTATATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094335 213 + 77229886 TAAAGATCTTGTAAAGTTGA-TATTTTTCAGTTAAATCTATTTAAATTGAATTTATTCCAAGATTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTATTCATTATAAATTACTAATGCCTAGGA-AGAAGATTTTAATTTCCATTATATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313367 213 + 17472758 TAAAGATCTTGTAAAGTTGG-TATTTTTCAGTTAAATTTATTTAAATTGAATTTATTCCAAGATTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTATTCATTATAAATTACTAACCCCTAGGA-AGAAGATTTTAATTTCCATTATATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352338 212 - 152096393 taaagatcttataAAGCTGA-TATTTTTCAGTT-AATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTGTCCATTATAAATTACTAATGCCTAGGA-AGAAGATTTTAATTTCCATTATATCATATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTGTGATGTTAACATCCTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309103 213 + 70235451 TAAAGATCTTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAAC-ACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63000520 213 - 75711847 TAAAGATCTTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAAC-ACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCTTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13553217 213 - 18804593 TAAAGATCTTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAAC-ACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170031 213 + 18905526 TAAAGATCTTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAAC-ACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 59999677 213 - 72318688 TAAAGATCTTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAAC-ACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 333713 213 - 1517660 TAAAGATCTTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGATTTCTAGAAAC-ACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3433500 214 + 6513552 TAAAGATCCTGTAAAGGTGATTTTTTTTCAGTTAAATCTATTTAAATTGAATTTATTTCAAGGTTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATATTGTTCATTATAAATTACTAATGCCTAGGA-AAAGGATTTTAATTTCCATTAAATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i colAng1.NW_012115433v1 C 0 I 13 s calJac3.chr13 105211515 205 + 117903854 GAAAGAGCTTGTAAAGTTGA-TATTTTTCAGTTAAATCTATTTACAT----TTTATTTCAAGATTTCTAGAAACAACGGACCCATCTGAAAAAATACCATAATACTGTTCACTATAAATTACTAATGGTTAG----AAAGATTTTAATTTCCATTATATCCTATATATCTTC--AA----GATTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19402856 206 - 31320352 TAAAGAGCTTGTGAAGTTGA-TATTTTTCAGTTAAATCTATTTACA-----TTTATTTCAAGATTTCCAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTGTTCATTATAAATTACTAATGGCTAG----AAATATTTTAATTTCCATTACATTCTATACATCTTCAAAA----AATTTTTGTAATTATTACTT-CTATGACATGAACATCCTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1591999 206 + 2203405 TAAAGAGCTTGTAAAGTTGA-TATTTTTCAGTTAAATATATTTACA-----TTTATTTCAAGATTTCTAGAAACAACTGATCCATCTGAAAAAGTACCATAATACTGTTCATCATAAATTACCAATGGCTAG----AAAGATTTTAATTTCCATTATATCCTATATATCTTCAAGA----TTTTTTTGTAATTATTACTT-ATATGACATTAACATCATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3548464 205 - 14941987 TAAAGAGCTTGTAAAGTTGA-TATTTTTCAGTTAAATCTATTTACA-----TTTATTTCAAGATTTCTAGAAACAACTGACCCATCTGAAAAAGTACCATAATACTGTTCATCATAAATTACTAATGGCTAG----AAAGATTTTACTTTCCATTATATCCTATATATCTTCAAGA----T-TTTTTGTAATTATTACTT-CTATGACATTAACATCCTTT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112274658 219 - 122678785 TAAAAAGCATACCAAGTGGT-TTTATTTAAATCAAATCTATTTAAATTAGATTTATGGCAAAATCCATATAAAAAAGTGCCCCATCTAAAAAAGTACCTTATCACCACTCATTCTAACTTAGTAATGCATAAGAGGAGGGGCTACAGTTTCCATTATATCCTATAAATTTTAAAGAAGTCT-TTTTTCTAATTATTACTTACGATAATATTTTCATATTTT i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 438356 158 - 2150887 TAAAGAACATGCCAAATGGATTTTATTTAAATGAAGTCTATTTTAACTAGATTTCTATCATGATTTATAGGAAGAGCTGACACATCTCTAGAAGTACCTTAATATCACTAATTGTAAACTAGTAAGAAATAAGA-GGAGGA----------------------------------A----T-TATT----ATTATCCGTT-CT------------------ i dasNov3.JH575754 I 465 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=56126.000000 s hg38.chr18_GL383571v1_alt 19664 9 + 198278 CATAATGTT s panTro5.chr18 64972086 9 + 78221452 CATAATGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094548 9 + 77229886 CATAATGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313580 9 + 17472758 CATAATGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352550 9 - 152096393 CACATAATT i nomLeu3.chr4 C 0 I 4 s rheMac8.chr18 57309316 9 + 70235451 CACACAATT i rheMac8.chr18 C 0 I 4 s macFas5.chr18 63000733 9 - 75711847 CACACAATT i macFas5.chr18 C 0 I 4 s macNem1.NW_012016688v1 13553430 9 - 18804593 CACACAATT i macNem1.NW_012016688v1 C 0 I 4 s cerAty1.NW_012001075v1 13170244 9 + 18905526 CACACAATT i cerAty1.NW_012001075v1 C 0 I 4 s chlSab2.chr18 59999890 9 - 72318688 CACACAATT i chlSab2.chr18 C 0 I 4 s manLeu1.NW_012106698v1 333926 9 - 1517660 CACACAATT i manLeu1.NW_012106698v1 C 0 I 4 s calJac3.chr13 105211720 9 + 117903854 TACACACTT i calJac3.chr13 C 0 I 4 s saiBol1.JH378121 19403062 9 - 31320352 CACAAACTT i saiBol1.JH378121 C 0 I 4 s cebCap1.NW_016107689v1 1592205 9 + 2203405 CACAAACTT i cebCap1.NW_016107689v1 C 0 I 4 s aotNan1.NW_018502140v1 3548669 9 - 14941987 CACACACTT i aotNan1.NW_018502140v1 C 0 I 4 s canFam3.chr1 112274879 7 - 122678785 --CACAATT i canFam3.chr1 I 2 I 4 s dasNov3.JH575754 438514 9 - 2150887 CACAATTTT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I e colAng1.NW_012115433v1 3433714 13 + 6513552 I a score=1304039.000000 s hg38.chr18_GL383571v1_alt 19673 121 + 198278 --ATATGAAGCATAATAATATAAAAGGCCAGAACTAGTAGAGTCCACAAAG---ATC---TCGTCCAAACCCTTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGCAACTGAGTT s panTro5.chr18 64972095 121 + 78221452 --ATATGAAGCATAATAATATAAAAGGCCAGAACTAGTAGAGTCCACAAAG---ATC---TTGTCCAAACCCGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGCAACTGAGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094557 121 + 77229886 --ATATGAAGCATAATAATATAAAAGGCCAGAACTAGTAGAGTCCACAAAG---ATC---TTGTCCAAACCCGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGCAACTGAGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313589 121 + 17472758 --ATATGAAGCCTAATAATATAAAAGGCCAGAAATAGTAGAGTCCACAAAG---ATC---TTGTCCAAACCCGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGCAACTGAGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352563 121 - 152096393 --ATATGAAGCATAATAATATAAAAGGCCAGAAGTAGTAGAGTCCACAAAG---ATC---TTGTCCAAACCCGTAATTAACAGTGAAGAA--AGTTCCATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i nomLeu3.chr4 I 4 C 0 s rheMac8.chr18 57309329 121 + 70235451 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAATCCACAAAG---ATC---TTGTCCAAACCTGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i rheMac8.chr18 I 4 C 0 s macFas5.chr18 63000746 121 - 75711847 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAGTCCACAAAG---ATC---TTGTCCAAACCTGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i macFas5.chr18 I 4 C 0 s macNem1.NW_012016688v1 13553443 121 - 18804593 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAGTCCACAAAG---ATC---TTGTCCAAACCTGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i macNem1.NW_012016688v1 I 4 C 0 s cerAty1.NW_012001075v1 13170257 121 + 18905526 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAGTCCACAAAG---ATC---TTGTCCAAACCTGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i cerAty1.NW_012001075v1 I 4 C 0 s chlSab2.chr18 59999903 121 - 72318688 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAGTCCACAAAG---ATC---TTGTCCAAACCTGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i chlSab2.chr18 I 4 C 0 s manLeu1.NW_012106698v1 333939 121 - 1517660 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAGTCCACAAAG---ATC---TTGTCCAAACCTGTAATTAACAGTGAAGAA--AGTTACATGTCTAAAAAGACCAAATTGTGTAACTAAGTT i manLeu1.NW_012106698v1 I 4 C 0 s colAng1.NW_012115433v1 3433727 121 + 6513552 --ATATGAAGCATAATAATATAAAAGCACAGAACTAGTAAAGTCCACAAAG---ATC---TTGTCCAAGCCTGTAATTAACAGTGAAGAA--ATTTACATGTCTAAAAAGACCAAATTGTGTAACTGAGTT i colAng1.NW_012115433v1 I 13 C 0 s calJac3.chr13 105211733 121 + 117903854 --ATGTGGAGTATAATAATATGAAAGGCCAGAACTAGTAGAGCACACAAAG---ATC---TTATCCAAACCCATAAGTAACAGTGAAGAA--AGCTACAGGTCTAAGAAGATCGAACTGTACAACTGAGTT i calJac3.chr13 I 4 C 0 s saiBol1.JH378121 19403075 121 - 31320352 --ATATGGAGTATAATAATATAAAAGGCCAGAACTAGTAGAGTACACAAAG---ATC---TTATCCAAAACTGTAATTAACAGTGAAGAA--AGCTACAGGTCTAAGAAGATCAAATTGTACAACTGAATT i saiBol1.JH378121 I 4 C 0 s cebCap1.NW_016107689v1 1592218 121 + 2203405 --ATATGGAATATAATAATATAAAAGGCCAGAATTAGTAGAGTACACAAAG---ATC---TTATCCAAACCCCTAATTAACAGTGAAGAA--AGCAACAGGTCTAAGAAGATCAAATTTTACAACTGTTTT i cebCap1.NW_016107689v1 I 4 C 0 s aotNan1.NW_018502140v1 3548682 120 - 14941987 --ATATGGAGTATAATAATATAAGAGGCCAGAACTAGTAGAGT-CACAAAG---ATC---TTATCCAAACTCAAAATTAACAGTGAAGAA--AGCTACAGGTCTAAGAAGATCAAATTGTACAATTGAGTT i aotNan1.NW_018502140v1 I 4 I 322 s canFam3.chr1 112274890 123 - 122678785 --ATATGGAAcgtaacattataaaatgtcagaactagaggagttcaagaag---atcaatttgttcaaatctgtaatttacaattaagaaacAGTTATCAACCTAAAAGGA---AATCACATAACTAAGGT i canFam3.chr1 I 4 C 0 s dasNov3.JH575754 438523 127 - 2150887 ATATATAGAGCATAAAATTATAACATCTTAGTACTAGATGATTCAACAAAGGTCATC---TGGGGCAAACCCATAATTTACAGTGAGAAA-CATTTGCATACCTCAAAAAACAAAGCCACATAACTAAGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=344340.000000 s hg38.chr18_GL383571v1_alt 19794 41 + 198278 AAGAATATCAGTAATAATAATGAAG-AAAAAAACAAGCAGGA s panTro5.chr18 64972216 41 + 78221452 AAGAATATCAGTAATGATAATGAAG-AAAAAAACAAGCAGGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094678 41 + 77229886 AAGAATATCAGTAATGATAATGAAG-AAAAAAACAAGCAGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313710 41 + 17472758 AAGAATATCAGTAATAATAATGAAG-AAAAAAACAAGCAGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352684 36 - 152096393 AAGAATATCAGTAATAATAATGAAG-AAAAAAACAAG----- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309450 38 + 70235451 AAGAATATCAGTAATAATAACGAAG-ACAAA---AAGCAGGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63000867 38 - 75711847 AAGAATATCAGTAATAATAATGAAG-ACAAA---AAGCAGGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13553564 38 - 18804593 AAGAATATCAGTAATAATAATGAAG-ACAAA---AAGCAGGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170378 38 + 18905526 AAGAATATCAGTAATAATAATGAAG-ACAAA---AAGCAGGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000024 38 - 72318688 AAGAATATCAGTAATAATAATGAAG-ACAAA---AAGCAGGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334060 39 - 1517660 AAGAATCCCGGTAATAATAATGAAGAAAAAA---AAGCAGGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3433848 38 + 6513552 AAGAATATCAGTAATAATAATGAAG-AAAAA---AAGCAGGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105211854 41 + 117903854 AAGAACATGAGTAATAATAATGAAG-AAAATAACAAGCAGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403196 40 - 31320352 AAGAAAATGAGCAATAATAATGAAG-AAAA-AAAAAGCAGGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1592339 39 + 2203405 AAGAAAATGAGTAATAATAATGAAG-AAA--AAAAAGCAGGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3549124 41 - 14941987 aaGAATATGAGTAATAATAATGAAG-AATAAAACAAGCAGGA i aotNan1.NW_018502140v1 I 322 C 0 s canFam3.chr1 112275013 39 - 122678785 AAGCATCTTATTAACAAGAATGGGG-GACAAG--GAGCAAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 438650 35 - 2150887 -AGAATATTAGTAA--AAAATGAGG-GAAAC---AAACAGGN i dasNov3.JH575754 C 0 I 111 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=1171974.000000 s hg38.chr18_GL383571v1_alt 19835 117 + 198278 AGAAAACGAGGAGGGAATATTTGTGGACAGTACACGCTACATACGG----------------CAGCATTTGCTAAGAACAGCATTT-CTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA s panTro5.chr18 64972257 118 + 78221452 AGAAAACGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAAGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094719 118 + 77229886 AGAAAACGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAAGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313751 118 + 17472758 AAAAAAGGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------AAGCATTTGCTAAGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352720 107 - 152096393 -------GAGGAAGGAATATTTGTTGACAGTACACGCTGCATACTG----------------CAGCATTTGCTATGAACAGCATTTGCTAAGTT---CTAATTTTTCAACTACATTAAAAACACTGAA------TTT-TA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309488 118 + 70235451 AGAAAAGGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAGGAACAGCATTTGGTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63000905 118 - 75711847 AGAAAAGGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAGGAACAGCATTTGGTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13553602 118 - 18804593 AGAAAAGGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAGGAACAGCATTTGGTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170416 118 + 18905526 AGAAAAGGAGGAGGGAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAGAAACAGCATTTGGTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000062 118 - 72318688 AGAAAAGGAGGAGGCAATATTTGTGGACAGTACACGCTGCATACTG----------------CAGCATTTGCTAGGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334099 118 - 1517660 AGAAAAGGAGGAGGGAATATTTGTGGACAGTACACACTGCATACTG----------------CAGCATTTGCTAGAAACAGCATTTGGTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3433886 118 + 6513552 AGAAAAGGAGGAGGGAATATTGGTAGACAGTACATGCTGCATACTG----------------CAGCATTTGCTAGGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105211895 134 + 117903854 AGAGAAGGAGGAGGGAATGTTTTTGGATAGTACATGGTGCATACTGCAGCATTTGCTAAGAACAGCATTTGCTAAGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403236 119 - 31320352 AGAGAAGGAGGAGGGAATATTTGTGGATTGCACATAGTGTATACTG----------------CAGCATTTGCTAAGAATAGCATTTGCTAAGTTCTCCTTATTTTTCAACTACATTAAAAACACTGAAT-----TTTAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1592378 116 + 2203405 AGAGAAGGAGGAGGGAATATTTGTGGAGAGTACATGGTGTATACTG----------------CAGCATTTGCTAAGAACAGTATTTGCTAAGTTCTCCTCATTTTTCAACTACATTAAAAACAATGAAT-----T---AA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3549165 118 - 14941987 AGAGAAGGAGGAGGGAATATTTGTGGATAGTACATGGTGTATACTG----------------CACCATTTGCTAAGAACAGCATTTGCTAAGTTCTCCTAATTTTTCAACTACATTAAAAACACTGAAT-----TTT-TA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112275052 114 - 122678785 AGAAAAAGAG--AGAAATTATGATTTTCATTTCAT--TGCATACTG----------------TA-CAT---CACAGAGCGAAGTTTGTTAAGTTCTCCTAATTTTTCAACTAC-TCCAGGACACTGAATGAAGATTT-TC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 438685 111 - 2150887 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=948584.000000 s hg38.chr18_GL383571v1_alt 19952 84 + 198278 AGAAATATTCAGACATGTTCTATTAATAATCTT---ACAAAG--------------ACATTCC-TTTAAAAAAGAGGTCTTCATTTCATTAGAGAAATTAGA s panTro5.chr18 64972375 84 + 78221452 AGAAatattcagacatgttctatttataatctt---acaaag--------------acattcc-tttaaaaaagaggtcttcatttcattagagaaattaga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094837 84 + 77229886 AGAAatattcagacatgttctatttataatctt---acaaag--------------acattcc-tttaaaaaagaggtcttcatttcattagagaaattaga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313869 84 + 17472758 AGAAatattcagacatgttctatttataatctt---acaaag--------------acattcc-tttaaaaaagaggtcttcatttcattagagaaattaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352827 84 - 152096393 GGAAATATTCAGACATGTTCTATTTATAATCTT---ACAAAA--------------ACATTCC-TTTAAAAAAGAGGTCTTCATTTCATTAGAGAAATTAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309606 85 + 70235451 AGAAatattcagacatgttccatttataatctt---acaaaa--------------acattctttttaaaaaagaggtcttcatttctttagagaaattaga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63001023 85 - 75711847 AGAAATATTCAGACATGTTCCATTTATAATCTT---ACAAAA--------------ACATTCTTTTTAAAAAAGAGGTCTTCATTTCTTTAGAGAAATTAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13553720 85 - 18804593 AGAAatattcagacatgttccatttataatctt---acagaa--------------acattctttttgaaaaagaggtcttcatttctttagagaaattcga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170534 85 + 18905526 AGAAatattcagacatgttccatttataatctt---acaaaa--------------acattctttttaaaaaagaggtcttcatttcattagagaaattaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000180 85 - 72318688 AGAAATATTCAGACATGTTCCATTTATAATCTT---ACAAAA--------------ACATTCCTTTTAAAAAAGAGGTCCTCATTTCATTAGAGAAATTAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334217 85 - 1517660 AGAAatattcagacacgttccatttataatctt---acaaaa--------------acattccttttaaaaaagaggtcttcatttcattagagaaattaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3434004 84 + 6513552 AGAAatattcagacatgttctatttataatctt---acaaaa--------------acattcc-tttaaaaaagaggtcttcatttcattagagaaattaga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105212029 83 + 117903854 AAAAATATTCAGATATGGTCTATTTATAATCTT---ACAAAA--------------ACATTCC-TTTAG-AAAGAAGTCTTCATTTCATTAGGGAAATtaga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403355 83 - 31320352 AAAAATATTCAGACATGTTCTATTTATAATCTT---AGAAAA--------------ACATTCC-TTTAG-AAAGAGGTCTTCATTTCATTAGGGAAATtaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1592494 84 + 2203405 AAAAAAATTCAGACATGTTCTATTTATAATCTT---ACAAAA--------------ACATTCC-TTTAGAAAAGAGGACTTCATTTCATTAGGGAcattaga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3549283 84 - 14941987 AAAAATATCCAGACATGTTCTATTTATAATCTT---ACAAAA--------------ACATTCC-TTTAGAAAAGAGGTCTTTATTTCATTAGGGAAATtaga i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112275166 99 - 122678785 AAAAATATTCAGACATATCCCATTCATAATCTT---AAAAAAAATGATAAAGAAAGACACTTTCTTTAAAAAAGAGCTTCTCATTTCATTAGGGAAAGCAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 438796 87 - 2150887 ACACACACACAAACATGTTCCATTCATCATCTTCAAAAAAAA--------------AAATCCC-TGTATAAAAGGGGCCTTCATTTCATTAGAGAAAACAGA i dasNov3.JH575754 I 111 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=10035.000000 s hg38.chr18_GL383571v1_alt 20036 1 + 198278 G s panTro5.chr18 64972459 1 + 78221452 g i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094921 1 + 77229886 g i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313953 1 + 17472758 g i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352911 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309691 1 + 70235451 g i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63001108 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13553805 1 - 18804593 g i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170619 1 + 18905526 g i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000265 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334302 1 - 1517660 g i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3434088 1 + 6513552 g i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1592578 1 + 2203405 g i cebCap1.NW_016107689v1 C 0 I 3 s aotNan1.NW_018502140v1 3549367 1 - 14941987 g i aotNan1.NW_018502140v1 C 0 I 3 s canFam3.chr1 112275265 1 - 122678785 G i canFam3.chr1 C 0 I 29 s dasNov3.JH575754 438883 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e otoGar3.GL873546 11205458 2397 - 20685099 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=1799718.000000 s hg38.chr18_GL383571v1_alt 20037 283 + 198278 ATTTCATTTCTT-GCTTCTATTTGTATTCTGCAACAATGCTATCTAACCTGCAGAGAAAGGAGCATCATTAAGATATTACCAAATGCAGATTC--TTTATGTATTTTGTTAGGATGAAGTTTTCCCCACTTCCTCATGCAACTCCAACAGTAGTCATGAAGCAACCTGAAAGACTACTACATTCTTTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGT-----------TTTGTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt s panTro5.chr18 64972460 283 + 78221452 atttcatttctt-gcttctatttgtatcctgcaacaatgctatctaacctgcagagaaaggagcatcattaagatattaccaaatgcagattc--tttatgtattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCAACAGTAGTCATGAAGCAACCTGAAAGACTACTCCATTCTTTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGT-----------TTGGTTTCTAGCCTATTAACCTGCAACTCATT-ACCTACtattcttgtttatatttatatt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64094922 283 + 77229886 atttcatttctt-gcttctaattgtattctgcaacaatgctatctaacctgcagagaaaggagcatcattaagatattaccaaatgcagattc--tttatgtattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCAACAGTAGTCATGAAGCAACCTGAAAGACTACTCCATTCTTTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGT-----------TTGGTTTCTAGCCTATTAACCTGCAACTCATT-ACCTACtattcttgtttatatttatatt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5313954 283 + 17472758 atttcatttctt-gcttctatttgtattctgcaacaatgctatctaacctgcagagaaaggagcatcattaagatattaccaaatgcagattc--tttatgtattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCAACAGTAGTCATGAAGCAACCTGAAAGACTACTCCATTCTTTTTCATCTGTGCTGCCTAAAAG-TTTCTGTTTTATTGCTGT-----------TTTGTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139352912 279 - 152096393 ATTTTATTTCTT-GCTTCTATTTGTATTCTGCAACAATGCTATGTAACCTGCAGAGAAAGGAGCATCATTAAGATATT----AATGCAGATTC--TTTATGTATTTTGTTAGGATGAAGTTTTCCCCACTTCCTCATGCAACTCCACCAGTAGTCATGAAGCAACCTGAAAGACTACTGCGTTCTTTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTAT-----------TTTGTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309692 282 + 70235451 atttcatgtctt-gcttttatttgtattctgcaacaaagctatctaacctgcagagaaaggggcatcattaagatactgccaaatgcagactc---ttacgtattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCACCCATAGTCATGAAGCAACCTCAAAGACTACTCCGTTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGG----------TTTTTTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63001109 282 - 75711847 ATTTCATGTCTT-GCTTTTATTTGTATTCTGCAACAAAGCTATCTGACCTGCAGAGAAAGGGGCATCATTAAGATATTGCCAAATGCAGACTC---TTACGTATTTTGTTAGGATGAAGTTTTCCCCACTTCCTCATGCAACTCCACCCATAGTCATGAAGCAACCTCAAAGACTACTCCGTTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTAGTGCTGG----------TTTTTTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13553806 283 - 18804593 atttcatgtctt-gcttttatttgtattctgcaacaaagatatctaacctgcagagaaaggggcatcattaagatattgccaaatgcagactc---ttacgtattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCACCCATAGTCGTGAAGCAACCTCAAAGACTACTCCGTTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGG---------TTTTTTTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170620 287 + 18905526 atttcatgtctt-gcttttatttgtattctgcaacaaagctatctaacctgcagagaaaggggcatcattaagatattgccaaatgcagactc---ttatgtattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCACCCATAGTCATGAAGCAACCTCAAAGACTACTCCGTTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGT-----TTTTTTTTTTTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000266 285 - 72318688 ATTTCATGTTTT-GCTTCTATTTGTATTCTGCAACAAAGCTATCTAACCTGCAGAGAAAGGAGCATCATTAAGATATTGCCAAATGCAGACTC--TTTAAGTATTTTGTTAGGATGAAGTTTTCCCCACTTCCTCATGCAACTCCACCCATAGTCATGAAGCAACCTCAAAGACTACTCCATTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGT--------TTTTTTTTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334303 285 - 1517660 atttcatgtctt-gcttttatttgtattctgcaacaaagctatctaacctgcagagaaaggagcatcattaagatattgccaaatgcagactc--tttaaatattttgttaggatgaagttttcccCACTTCCTCATGCAACTCCACCCATAGTCATGAAGCAACCTCAAAGACTACTCCGTTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGT--------TTTTTTTTTTCTAGCCTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3434089 281 + 6513552 atttcgtgtctt-gcttctatttgtattctgtgacaaaactatctaacctgcagagaaaggagcatcaataagatattgccaaatgcagactc----tatgtattttgttaagatgaagttttcccCACTTCCTCATGCAACTCCACCCGTAGTCATGAAGCAACGTCAAACACTACTCCGTTC-TTTTCATCTGTGCTGCCTAAAGG-TTTCTGTTTTATTGCTGG----------TTTTTTTTCTAGCGTATTAACCTGCAATTCATT-ACCTACtattcttgtttatatttatatt i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112275295 280 - 122678785 GATTCATATCTTCACTTCTGTTTATACTTTGCAACAGTGTTCTC--ACCCATGGAAAGATGAGCATCACTGAAATATTTCCAGTTGCAGACTCTTTCTATGTATTTTGCTAGGATGGATTTTTCTTCACTCCTTCATGCAATTCCCCCACTAGATATGAAGTAACCTGAGCAATTTCTCTGTTC-TTTTCATGTATGCTGCCCAAAGGATGTCTGTTTTGTTGCTGTTGCTGTTTTGTTGTGTTTTAAACTTATTAACCTG---------------CCATTCTTGCTTATATTCAC-TT i canFam3.chr1 I 29 C 0 s dasNov3.JH575754 438884 287 - 2150887 GTAGCATTTCTTTGCATCTATTTGCATTTTGCAATAATGCCAACTAACTCACAGAGAGAAGAGCTTTTTCGAAATATTCCCCAATGCAGACTCTTTTTAAGTCTTTTGACA-GATGTATTTCCCCTAATTCCCTCATGCAATTCCACTACAAGATATGAAGCAATCTGAAAGATTTCTCTCCGCTTCTTCATGTAGGCTGCTTAAA---TTGTTTTGTTGTTGCTGA------TTTGTTTCATTTTGAATCTTTTA--CTGTCATTTATTAAACTGTCTTTCTTGTTCATATTTACTTT i dasNov3.JH575754 C 0 I 9 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=68184.000000 s hg38.chr18_GL383571v1_alt 20320 10 + 198278 tgcagttgct s panTro5.chr18 64972743 10 + 78221452 tacagttgct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64095205 10 + 77229886 tacagttgct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5314237 10 + 17472758 tacagttgct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139353191 10 - 152096393 tacagttgct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309974 10 + 70235451 tacagttgct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63001391 10 - 75711847 tacagttgct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13554089 10 - 18804593 tacagttgct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170907 10 + 18905526 tacagttgct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000551 10 - 72318688 tacagttgct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334588 10 - 1517660 tacagttgct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3434370 10 + 6513552 tacagttgct i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112275575 10 - 122678785 TACATTTACT i canFam3.chr1 C 0 I 165 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e dasNov3.JH575754 439171 9 - 2150887 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=2829666.000000 s hg38.chr18_GL383571v1_alt 20330 490 + 198278 ccttgaacaatgtggg-gttaagggtgctgatcacccccttatgcagttcaacatctgtgtataaattttgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaacacacagttaattgacacatatattgtatgctatatgtgttatctattgtattcttacaataaagtaaacattcttttctctatcaaaagtttaggggaaagaaaatgttatcaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcataaaagccttcattctcttcgccatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcaggggtagcaaaggtg---gaagatctgcataggagtggacctgcacagctcaatcctgtgttgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa s panTro5.chr18 64972753 490 + 78221452 ccttgaacaatgtggg-gttaagggtgctgatcacccccttatgcagttcaacatctgtgtataaattttgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaacacacagttaattaacacatatattgtgtgctatatgtgttatgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttatcaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcataaaagccttcattctcttcgtcgtgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcaggggtagcaaaggtg---gaagatctgcacaggagtggacctgcacagctcaatcctgtgttgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64095215 490 + 77229886 ccttgaacaatgtggg-gttaagggtgctgatcacccccttatgcagttcaacatctgtgtataaattttgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaacacacagttaattaacacatatattgtgtgctatatgtgttatgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttatcaagaaaaccataaggaaaagaaaatgtatttactattcattaagtggaagtggatcatcataaaagccttcattctcttcgtcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcaggggtagcaaaggtg---gaagatctgcacaggagtggacctgcacagctcaatcctgtgttgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5314247 490 + 17472758 ccttgaacaatgtggg-gttaagggtgctgatcacccccttatgtagttcaacatctgtgtataaattttgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaacacacagttaattgacacatatattgtatgctatatgtgttatgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttatcaagaaaaccataaggaaaagaaaatatatttactattcatttagtggaagtggatcatcataaaagcctttattctcttcgtcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcaggggtagcaaaggtg---gaagatctgcataggagtggacctgcacagctcaatcctgtgttgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139353201 490 - 152096393 ccttgaaccatgtgggagttaagggtgctgatcaccccctcatgcagttcaaaatctgtgtataaattttgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaacaaacagttaatcaacacatatattgtatgctatatgtattatgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttagaggaaagaaaatgttattaagaaaatcataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcatgaaaaccttcattctcttcgtcatgttgagtgagctgaggaggaggatgaagaggaagggttggtgttgctgtctc-ggggtagcaaaggtg---gaagatctgcatagaagtggacctgcacagctcaaccctgtgttgatcaaagggcaactgtactttgcattatgtttgcttatatttactttaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57309984 494 + 70235451 ccttgaataatgtgggagttaagggtgctgatcacccccctatgcagttcaaaatctgtgtataaattctgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaataaacagttaattagcacatattttgtatgctatatgcattacgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcataaaagtcttcattctcttcttcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcagggttagcaaaggtggaagaagatctgcgtagaagtggacctgcaaagctcaaccctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63001401 494 - 75711847 ccttgaataatgtgggagttaagggtgctgatcacccccctatgcagttcaaaatctgtgtataaattctgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaataaacagttaattagcacatattttgtatgctatatgcattacgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcataaaagtcttcattctcttcttcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcagggttagcaaaggtggaagaagatctgcgtagaagtggacctgcaaagctcaaccctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13554099 494 - 18804593 ccttgaataatgtgggagttaagggtgctgatcacccccctatgcagttcaaaatctgtgtataaattctgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaataaacagttaattagcacatattttgtatgctatatgcattacgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcataaaagtcttcattctcttcttcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcagggttagcaaaggtggaagaagatctgcgtagaagtggacctgcaaagctcaaccctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13170917 493 + 18905526 ccttgaacaatgtgggagttaagggtgctgatcacccccctatgcagttcaaaatctgtgtataaattctgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaataaacagttaattagcacatattttgtatgctatatgcattacgtattgtattcttacaataaa-taaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcataaaagtcttcattctcttcttcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcagggttagcaaaggtggaagaagatctgcgtagaagtggacctgcaaagctcaaccctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60000561 492 - 72318688 ccttgaacaatgtgggagttaagggtgctgatcacccccctatgcagttcaaaatctgtgtataaattctgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaataa--agttaattagcacatattttgtatgctatatgcattatgtattgtattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtgaatcatcataaaagtcttcattctcttcttcgtgttgagtgagctgaggaggaggctgaaaaggaggggttggtattgctgtctcagggttagcaaaggtggaagaagatctgcgtagaagtggacctgcaaagctcaaccctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 334598 493 - 1517660 ccttgaacaatgtgggagttaagggtgctgatcacccccctatgcagttcaaaatctgtgtataaattctgagttcccaaaaacttaactactcatagcctactgtttactggaagccttaccaacaaaataaacagttaattagcacatattttgtatgctatatgcattacgtattgtattcttacaataaa-taaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtgtatcatcataaaagtcttcattctcttcttcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcagggttagcaaaggtggaagaagatctgcgtagaagtgggcctgcaaagctcaaccctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3434380 492 + 6513552 ccttgaacaatgtgggagttaagtgtgctgatcacccccctatgcagttcaaaatctgt-tataaattttgagttcccaaaaacttaactactcttagcctactgtttactggaagccttaccaacaaaataaacagttaattagcacatattttgtatgctatatgtattatgtattatattcttacaataaagtaaacattcttttctctatcaaaaggttaggggaaagaaaatgttattaagaaaaccataaggaaaagaaaatatatttactattcattaagtggaagtggatcatcatgaaagtcttcattctcttcttcatgttgagtgagctgaggaggaggctgaagaggaggggttggtgttgctgtctcagggttagcaaaggtggaagaagatc-gcgcagaagtggacctgcaaagctcaactctgtgatgatcaaaggtcaactgtactttgcattatgtttgcttatatttactttaaa i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e dasNov3.JH575754 439171 9 - 2150887 I e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=1107852.000000 s hg38.chr18_GL383571v1_alt 20820 181 + 198278 atttTCTATTAGTTTGAATCCAAGTTTAGTTGCTGATG-AAAGGACTCAAATATAGTGATTTCAGAAACCAGGTTTATTCTCAAGTAAAGGAAGTTCAGTGGTAGCTGGTCAAAAGCTGATATTGAAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTTTCTTTCTCTTTTTTAAAttttta s panTro5.chr18 64973243 181 + 78221452 atttTCTATTAGTTTGAATCCGAGTTTAGTTGCTGGTG-AAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGTCAAAAGCTGATATTGAAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTTTCTTTCTCTTTTTTAAAttttta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64095705 181 + 77229886 atttTCTATTAGTTTGAATCCGAGTTTAGTTGCTGGTG-AAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGTCAAAAGCTGATATTGAAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTTTCTTTCTCTTTTTTAAAttttta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5314737 181 + 17472758 atttTCTATTAGTTTGAATCCGAGTTTAGTTGCTGGTG-AAAGGACTCAAATATAGTGATTTCAGAAACCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGTCAAAAGCTGATATTGAAGGAAAAC-TGTGAAGTCATTA---ACCAAGGAATTTTCTTTCTCTTTTTTAAAttttta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139353691 182 - 152096393 atttTGTATTAGTTTGAATCCGAGTTTAGTTGCCAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATGTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGTCAAAGGCTGATATTGAAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTTTCTTTCTCTTTTTAAAAAtttta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57310478 182 + 70235451 atttTGTATTAGTTTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGCCAAAGGCTGATATTGCAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAATTATTa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63001895 182 - 75711847 atttTGTATTAGTTTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGCCAAAGGCTGATATTGCAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAATTATTa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13554593 182 - 18804593 atttTGTATTAGTTTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGCCAAAGGTTGATATTGCAGAAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAATTATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13171410 182 + 18905526 atttTGTATTAGTTTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTACTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGCCAAAGGCTGATATTGCAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAATTATTa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60001053 182 - 72318688 atttTGTATTAGTTTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGCCAAAGGCTGATATTGCAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAATTATTa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 335091 182 - 1517660 atttTGTATTAGTTTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTACTTTCAAGTAAAGGAAGTTCAGTGGTAGCTGGCCAAAGGCTGATATTGCAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAATTATTa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3434872 182 + 6513552 atttTGTATTAGTCTGAATCCGAGTTCAGTTGTTAGTGAAAAGGACTCAAATATAGTGATTTCAGAAATCAGGTTTATTTTCAAGTAAAGGAAGTTCAGTAGTAGCTGGCCAAAGGCTGATAGTGCAGGAAAAC-TGTGAAGTCACTA---ACCAAGGAATTCTCTTTCTCTTTTTAAAAttttta i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 439180 179 - 2150887 ATTTTGTATTAGTTGGGACTTGAATGTAGTTGATAATGAATTGGACCCAAATATGGTGAGTTCAAAAATCAGGttt-ttttcacataaaggaaa------actagctggtgtaaggccagcatggtaggcagccatatgaagtcattagggaccaaggagttttcagttcttctccaataccttta i dasNov3.JH575754 I 9 I 9705 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=3826826.000000 s hg38.chr18_GL383571v1_alt 21001 689 + 198278 tttctattttaagttgtggggtacatgtgcaggacgtccaggtttgttacataggtaaacgtgtgccagatttgctgcacctatcaaaccatcacctagatattaagttcagcatgcattagctatttttcctaatgctcttcctcctcccaccccaacccctgacaggccccaatgtgtgttgttcccctccccatgtccatgtgttctcattgttcagctcccacttatgagtgagaacatgtggtgtttggttttctgttcctgcattagtttgctgaggctgatggcttccagcactacgcatgtccctgcaaaggacatgatctcattccttttgatagctgtgtagtattccatggtagtatatatgtgtcacattttctttatccagtctatcattgataggcatttgggttgattctgtgtctttgctattgtgaatagtgctgcaataaacatacatgtgtatgtctctttttaatagaatgatttatatttctttgggattgctgggttaaatggtatttctggttctatatctttgaggaatt-----------ttccacaatggttgaactaatttacattcccatcaacagtgtaagagtgttcctattggccaggtgtgcgtggtggttcatgcctgtaatcccagcactttgggaggccaaggtggacagatcacctgagttccg s panTro5.chr18 64973424 689 + 78221452 tttctattttaagttgtggggtacatgtgcaggacgtccaggtttgttacataggtaaacgtgtgccagatttgctgcacctatcaaaccatcacctagatattaagctcagcatgcgttagctatttttcctaatgctcttcctcctcccaccccaacccctgacaggccccagtgtgtgttgttcccctccccatgtccatgtgttctcattgttcagctcccacttatgagtgagaacatgtggtgtttggttttctgttcctgcgttagtttgctgaggctgatggcttccagcactatgcatgtccctgcaaagtacatgatctcattccttttgacaactgtgtagtattccatggtagtatatatgtatcacattttctttatccagtctatcattgataggcatttgggttgattctgtgtctttgctattgtgaatagtgctgcaataaacatacatgtgtatgtctctttttaatagaatgatttatatttctttgggattgctgggttaaatggtatttctggttctagatctttgaggaatt-----------ttccacaatggttgaactaatttacattcccaccaagagtgtaagagtgttcctattggccaggtgtgcatggtggttcatgcccgtaatcccagcactttgggatgccaaggtgggcagatcacctgaggtccg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64095886 689 + 77229886 tttctattttaagttgtggggtacatgtgcaggacgtgcaggtttgttacataggtaaatgtgtgccagatttgctgcacctatcaaaccatcacctagatattaagctcagcatgcgttagctatttttcctaatgctcttcctcctcccaccccaacccctgacaggccccaatgtgtgttgttcccctccccatgtccatgtgttctcattgttcagctcccacttatgagtgagaacatgtggtgtttggttttctgttcctgcgttagtttgctgaggctgatggcttccagcactatgcatatccctgcaaagtacatgatctcattccttttgacaactgtgtagtattccatggtagtatatatgtatcacattttctttatccagtctatcattgataggcatttgggttgattctgtgtctttgctattgtgaatagtgctgcaataaacatacatgtgtatgtctctttttaatagaatgatttatatttctttgggattgctgggttaaatggtatttctggttctagatctttgaggaatt-----------ttccacaatggttgaactaatttacattcccaccaacagtgtaagagtgttcctattggccaggtgtgcatggtggttcatgcccgtaatcccagcactttgggatgccaaggtgggcagatcacctgaggtccg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5314918 688 + 17472758 tttctattttaagttgtggggtacatgtgcaggacgtccaggtttgttacataggtaaacgtgtgccagatttgctgcacctatcaaaccatcacctagatagtaagctcagcatgcattagctatttttcctaatgctcttcctcctcccaccccaacccctgacaggccccaatgtatgttgttcccctccccatgtccacgtgttctcattgttcagctcccacttatgagtgagaacatgtggtgtttggttttctgttcctgcattagtttgccgaggctgatggcttccagcactacgcatgtccctgcaaaggacatgatctcattccttttgatagctgtgtagtattccatggtagtatatatgtatcacattttctttatccagtctatcattgataggcatttgggttgattctgtgtctttgctattgtgaatagtgctgcaataaacatacatgtgtacgtctctttttagtagaatgatttatatttctttgggattgctgggttaaatggtatttctggttctagatctttgaggaatt-----------ttccacaatggttgaactaatttacatt-ccaccaacagtgtaagagtgttcctattggccaggtgtgcgtggtggttcatgcccgtaatcccagcactttgggacaccaaggtgggcagatcaccttaggtccg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139353873 683 - 152096393 tttctattttaagttgtggggtacatgtgcaggacgtccaggtttgttacataggcaaacgtgtgccagatttgctgcacctatcaaaccatcacctaaatattaagctcagcatgcattag------ttcctaatgctcttcctcctcccaccccaacccctgacaggccccaatgtgtgttgttcccctccccatgtccatatgttctcattgttcagctcccacttatgagtcagaacatgtggtgtttggttttctgttcctgaattagtctgctgaggatgatggcttccagcactatgcatgtccctgcaaaggacatgatctcattccttttgatagctgcatagtattccatggtagtatatatgtatcatattttctttatccagtctatcattgataggcatttgggtcggttccatgtctttgctattgtgaatagtgctgcaaaaaacatacacgtgtatgtatctttttaatagaatgatttatattccttttggattgctgggtcaaatggcatttctggttctagatctttgaggaatc-----------ttccacaatggttgaactaatttacattcccaccaacagtgtaaaattgttcctattggccaggtgtgtgcagtggctcatgcctgtaatcccagcactttgggaagccaaggtgggtggatcacctgaggtcag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57310660 695 + 70235451 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacgtaggtaaacgtgtgccagatttgctgcatgtatcaaaacatcaccaagatattaagctcagcatgtattagctatttttcctaatgctctccctcctcccaccccaacccctgacaggccccactgtgtgttgctcccct--ctgtgtccatgtgttctcattgttcagttgtcacttatgagtgagaacatgtagtgtttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcgtgtccctgcaaaggacatgatctcattccttttgatggctgtgtagtattccatg---gtgtatatgtatcacattttctttattcagtctatcattgataggcatttgggttgattccatgtctttgctcttgtgaatagtgctgcaataaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattgctgggtcaaatggtatttctggttctagatctttgaagaattgccacaacatcttccacaatggttgaactaatttgcattcccaccaacaatgtaaaagtgttcctcttggctaagtgtgcgtggtggctcatgtctgtaatctcagcactttgggaggccaaggtgggcagataacctgaggtcag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63002077 695 - 75711847 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacgtaggtaaacgtgtgccagatttgctgcatgtatcaaaacatcaccaagatattaagctcagcatgtattagctatttttcctaatgctctccctcctcccaccccaacccctgacaggccccactgtgtgttgctcccct--ctgtgtccatgtgttctcattgttcagttgtcacttatgagtgagaacatgtagtgtttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcgtgtccctgcaaaggacatgatctcattccttttgatggctgtgtagtattccatg---gtgtatatgtatcacattttctttattcagtctatcattgataggcatttgggttgattccatgtctttgctcttgtgaatagtgctgcaataaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattgctgggtcaaatggtatttctggttctagatctttgaagaattgccacaacatcttccacaatggttgaactaatttacattcccaccaacaatgtaaaagtgttcctcttggctaagtgtgcgtggtggctcatgtctgtaatctcagcactttgggaggccaaggtgggcagataacctgaggtcag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13554775 695 - 18804593 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacgtaggtaaacgtgtgccagatttgctgcatgtatcaaaacatcaccaagatattaagctcagcatgtattagctatttttcctaatgctctccctcctcccaccccaacccctgacaggccccactgtgtgttgctcccct--ctgtgtccatgtgttctcattgttcagttgtcacttatgagtgagaacatgtagtatttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcgtgtccctgcaaaggacatgatctcattccttttgatggctgtgtagtattccatg---gtgtatatgtatcacattttctttattcagtctatcattgataggcatttgggttgattccatgtctttgctcttgtgaatagtgctgcaataaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattgctgggtcaaatggtatttctggttctagatctttgaagaattgccacaacatcttccacaatggttgaactaatttacattcccaccaacaatgtaaaagtgttcctcttggctaagtgtgcgtggtggctcatgtctgtaatctcagcactttgggaggccaaggtgggcagataacctgaggtcag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13171592 695 + 18905526 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacgtaggtaaacgtgtgccagatttgctgcatgtatcaaaacatcacctagatattaagctcagcatgtattagctatttttcctaatgctctccctcctcccaccccaacccctgacaggccccactgtgtgttgctcccct--ctgtgtccatgtgttctcattgttcagttgtcacttatgagtgagaacatgtagtgtttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcatgtccctgcaaaggacatgatctcattccttttgatggctgtgtagtattccaca---gtgtatatgtatcacattttctttatccagtctatcattgataggcatttgggttgattccatgtctttgctcttgtgaatagtgctgcaataaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattgctgggtcaaatggtatttctggttctagatctttgaagaattgccacaacatcttccacaatggttgaactaatttacattcccaccaacaatgtaaaagtgttcctcttggctaagtgtgcgtggtggctcatgtctgtaatctcagcactttgggaagccaaggtgggcagataacctgaagtcag i cerAty1.NW_012001075v1 C 0 I 70 s chlSab2.chr18 60001235 694 - 72318688 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacataggtaaacatgtgccagatttactgcatgtatcaaaacatcacctagatattaagctcagcatgtattagctatttttcctaatgctctccctcctcccagcccaacccctgacaggccccactgtgtgttgctcccct--ctgtgtccatgtgttctcattgttcagttgtcacttatgagtgagaacatgtagtgtttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcatgtccctgcaaaggacatgatctcattccttttgatggctgtgtagtattccatg---gtgtatatgtatcacattttctttatccagtctatcattgataggcatttgggttgattccatgtctttgctcttgtgaatagtgctgcaagaaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattggtgggtcaaatggtatttctggttctagatctttgaagaattgccacaacatcttccacaatgattgaactaatttacattcccaccaacaatgtaaaa-tgttcctcttggctaagtgtgcgtggtggctcatgtctgtaatctcagcactttgggaggccaaggtgggcagataacctgaggtcag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 335273 695 - 1517660 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacgtaggtaaacatgtgccagatttgctgcatgtatcaaaacatcacctagatattaagctcagcatgtattagctatttttcctaatgctctccctcctcccaccccaacccctgacaggccccactgtgtgttgctcccct--ctgtgtccatgtgttctcattgttcagttgtcacttatgagtgagaacatgtagtgtttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcatgtccctgcaaaggacatgatctcattccttttgatggctgtgtagtattccaca---gtgtatttgtatcacattttctttatccagtctatcattgataggcatttgggttgattccatgtctttgctcttgtgaatagtgctgcaataaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattgctgggtcaaatggtatttctggttctagatctttgaagaattgccacaacatcttccacaatggttgaactaatttgcattcccaccaacaatgtaaaagtgttcctcttggctaagtgtgcgtggtggctcatgtctgtaatctcagcactttgggaagccaaggcgggcagataacctgaggtcag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3435054 674 + 6513552 tttctattttaagttcaggggtacatgtgcaggacgtccaggtttgttacataggtaaacgtgtgccagatttgctgcatgtatcaaaacatcacctagatattaagctcagcatgtattagctatttttcctaatgctctccctcttcccaccccaacccctgacaggccccagtgtgtgttgctcccct--ctgtgtccatgtgttctcactgttcagctctcacttatgagtcagaacatgtcatgtttggttttctgttcctgcattagtttgctgaggatgatggcttccagctctacgcatgtccctgcaaaagacatgatctcattccttttgatgg------------------------atatgtatcacattttctttatccagtctatcattgataggcatttgggttgattccatgtctttgctcttgggaatagtgctgcaataaacatacacgtgcatgtatctttttaatagaatgatttatattcctttggcattgctgggtcaaatggtatttctggttctagatctttgaggaattgccacaacatcttccacaatggttgaactaatttacattcccaccaacagtgtaaaagtgttcctcttggctaggtgtgcgtggtggctcatgtctgtaatctcagcactttgggaggccaaggtgggcagatcacctgaggtcag i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e dasNov3.JH575754 439359 9705 - 2150887 I e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=336678.000000 s hg38.chr18_GL383571v1_alt 21690 72 + 198278 gaggtcgagaccagcctagccaacatggtgaaacctcatctctactaaaaatacaaaaattagct-gggcatg s panTro5.chr18 64974113 72 + 78221452 gaggtcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaataagct-gggcatg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64096575 72 + 77229886 gaggtcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaataagct-gggcatg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5315606 72 + 17472758 gaggtcgagaccagcctagccaacatggtgaaaccccatctctactaaaaatacaaaaattagct-gggcatg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139354556 72 - 152096393 gagttcgagaccagcctggccaagatgatgaaaccccatctctactaaaaatacaaaaattagct-gggcatg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57311355 72 + 70235451 gagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattatct-gggtatg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63002772 72 - 75711847 gagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattatct-gggtatg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13555470 73 - 18804593 gagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattatctggggcgcg i macNem1.NW_012016688v1 C 0 C 0 s chlSab2.chr18 60001929 72 - 72318688 gagttcgagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaaaaattatct-gggtatg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 335968 72 - 1517660 gagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattatct-gggtatg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3435728 72 + 6513552 gacttcgagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaaaaattatct-gggtatg i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e dasNov3.JH575754 439359 9705 - 2150887 I e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C e cerAty1.NW_012001075v1 13172287 70 + 18905526 I a score=2490692.000000 s hg38.chr18_GL383571v1_alt 21762 500 + 198278 gtggcgggcgcctgt-aatccca-gctactcggtaggctgaggcaggagaatcacttgactccaggaggcagaggttgcaatgagccaagatcgcgccc----------------ctgcactcca-gcctgtgc-gacagagt-aaagtccatct-ca-aacaaaaaaaaaa----aaaaaa-agaaaaaaagcgtgttcctcttcctatttctccacag--cctcaccagcatctgttg-tttcttgactttttaataattgccattctgact-ggtgtgaggtggtatctcattttggttttgatttgcatttccctaatgatcggtgatgttgaccatttttc--atgtttgttggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt-------------------ttttccttgtaaatttccaatggaatagaacagagaactcagaaataagaccgcacatctacaaccatctgatctttcacaaacctgacaaaaacaagcaatggg s panTro5.chr18 64974185 492 + 78221452 gtggcgggcgcctgt-aatccca-gctactcggtaggctgaggcaggagaatcacttgactccaggaggcagaggttgcaatgagccgagatcgcgccc----------------ctgcactcca-gcctgtgc-gatagagt-aaagtccatct-ca-aacaaataaaaaa----aaaaaa------------gtgttcctcttcctatttctccacag--cctcaccagcatctgttg-tttcttgactttttaataattgccattctgact-ggtgtgaggtggtatctcattttggttttgatttgcatttccctaatgatcggtgatgttgaccatttttcgtatgtttgttggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtgtttt-------------------ttttccttgtaaatttccaatggaatagaacagagaactcagaaataagaccgcacatctacaaccatctgatctgtcacaaacctgacaaaaacaagcaatggg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64096647 490 + 77229886 gtggcgggcgcctgt-aatccca-gctactcggtaggctgaggcaggagaatcacttgactccaggaggcagaggttgcaatgagccgagatcgcgccc----------------ctgcactcca-gcctgtgc-gatagagt-aaagtccatct-ca-aacaaataaaaaa----aaaaa-------------gtgttcctcttcctatttctccacag--cctcaccagcatctgttg-tttcttgactttttaataattgccattctgact-ggtgtgaggtggtatctcattttggttttgatttgcatttccctaatgatcggtgatgttgaccatttttcgtatgtttgttggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt-------------------ttttccttgtaaatttccaatggaatagaacagagaactcagaaataagaccgcacatctacaaccatctgatctttcacaaacctgacaaaaacaagcaatggg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5315678 504 + 17472758 gtggcgggcgcctgt-aatccca-gctactcggtaggctgaggcaggagaatcacttgactccaggaggcagaggttgcaataagccgagatcgcgccc----------------ctgcactcca-gcctgtgc-gacagagt-aaagtccatct-ca-aacaaacaaaaaa----aaaagaaagaaaaaaaaagtgttcctcttcctatttctccacag--cctcaccagcatctgttg-tttcttgactttttaataattgccattctgact-ggtgtgaggtggtatctcattttggttttgatttgcatttccctaatgatcggtgatgttgaccatttttcgtatgtttgttggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatgggattgtgtttt-------------------ttttccttgtaaatttccaatggaatagaacagagaactcagaaataagaccgcacatctacaaccatctgatctttcacaaacctgacaaaaacaagcaatggg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139354628 490 - 152096393 gtggtgggtgcctgc-aatccca-gctactgggtaggctgagacaggagaatcacttgactccaggaggcagaggttgcagtgagccaagatcgcgcct----------------ctgcactcca-gcctgtgt-gatagagtaaaagtccatct-ca-aacaaaaaaaaaa----aagaag---aaaaaaaaagtgttcctattcctatttctccacaa--cctcatcagcatctgttg-tttcttgactttttaataattgccattctgact-tgtgtgaggtggtatctcattttggttttgatttgcatttccctaatggtcagtaatgttgaccatttttcatatgtttgttggccacatgtatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttatg-ttt-------------------tttttcttgtaaatttccaat-----------gagaactcagaaataagaccgcacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57311427 497 + 70235451 gtggcaggtgcctgt-aatccca-gctactgggaaggctgaagcaggagaatcacttgactccagtaggcgaaggttgcaataagccgagatcatgcct----------------ctgcacccca-gactgggt-gacacagtaaaagtccatct-cc-aaaaaaaaaaaaa----aaaag--------------------tgttcctatttctccacaa--cctcaccagcatctgttg-tttcttgactttttaataattaccattctgatt-ggtgtaaggtgatatctcattgtagttttggtttgcatttccttaatgatcgttgatgtttaccatttttcatatgtttattggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt------ttatgtttttttgtttttcttgtaaattTccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaaccagacaaaaacaagcaataga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63002844 496 - 75711847 gtggcaggtgcctgt-aatccca-gctactgggaaggctgaagcaggagaatcacttgactccagtaggcgaaggttgcaataagccgagatcatgcct----------------ctgcacccca-gactgggt-gacacagtaaaagtccatct--c-caaaaaaaaaaaa----aaaag--------------------tgttcctatttctccacaa--cctcaccagcatctgttg-tttcttgactttttaataattaccattctgatt-ggtgtaaggtgatatctcattgtagttttggtttgcatttccttaatgatcgttgatgttgaccatttttcatatgtttattggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt------ttttgtttttttgtttttcttgtaaattTccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaaccagacaaaaacaagcaataga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13555543 494 - 18804593 gttgtgggcgcctgt-agtccca-gctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagatcatgcca----------------ctgcactcca-gcctgggc-aacagagcgagactccatct----taaaaaaaaaaaa----aaaag--------------------tgttcctatttctccacaa--cctcaccagcatctgttg-tttcttgactttttaataattaccattctgatt-ggtgtaaggtgatatctcattgtagttttggtttgcatttccttaatgatcgttgatgttgaccatttttcatatgtttattggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgt--ttt------ttttgtttttttgtttttcttgtaaattTccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaaccagacaaaaacaagcaataga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13172357 501 + 18905526 gtggcaggtgcctgtaaatcccaggctact-ggaaggctgaagcaggagaatcacttgactccagtaggcgaaggttgcaataag-cgagatcgtgtct----------------ctgcactccaggactgggtggacacagtaaaagtccattctcc-aaaaaaaaaaaaa----aaaag--------------------tgttcctatttctccacaaacctccaccagcatctgttgttttcttgactttttaaatattaccattctgattgggtgtaag--gatactcatttgtagttttggtttgcatttccttaatga-cgttgatgttgatcatttttcatatgtttattggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt------ttttgtttttttgtttttcttgtaaattTccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaataga i cerAty1.NW_012001075v1 I 70 C 0 s chlSab2.chr18 60002001 503 - 72318688 gtggcaggttcctgt-aatccca-gctactgggaaggctgaagcaggagaatcacttgactccagtaggcgaaggttgcaataagccgagatcatgcct----------------ctgtactcca-gactgggt-gacacagtaaaagtccatct-cc-aaaaaaaaaaaaa----aaaag--------------------tgttcctatttctccacaa--cctcaccagcatctgttg-ttttttgactttttaataattaccattctgatt-ggtgtaaggtgatatctcattgtagttttggtttgcatttccttaatgatcgttgatgttgaccatttttcatatgtttattggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttttttttgttttttttttttgtttttcttgtaaattTccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaatctgacaaaaacaagcaataga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 336040 498 - 1517660 gtggcaggtgcctgt-aatccca-gctactgggaaggctgaagcaggagaatcacttgactccagtaggcgaaggttgcaataagccgagatcgtgtct----------------ctgcactcca-gactgggt-gacacagtaaaagtccatct-ccaaaaaaaaaaaaaa----aaaag--------------------tgttcctatttctccacaa--cctcaccagcatctgttg-tttcttgactttttaataattaccattctgatt-ggtgtaaggtgatacctcattgtagttttggtttgcatttccttaatgatcgttgatgttgatcatttttcatatgtttattggccacatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt------ttttgtttttttgtttttcttgtaaattTccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaataga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3435800 508 + 6513552 gtgacaggtgcctgt-aatccca-gctactggggaggctgaagcaggtgaatcacttgactccaggaggcggaggttgcaatgagccgagatcacgcctctgcactcctgcactcctgcactcca-gactgggt-gacacagtaaaagttcatct-cc-aaaaaaaaaaaaaaaacaaaag--------------------tgtttctatttctccacag--cctcaccagcatctgttg-tttcttgactttttaataattgccattctgatt-ggtgtgaggtgatatctccttgtggttttgatttgcatttccttaatgatcgttgatgttgaccatttttcatatgtttattggccatatgaatgtcttcttttgagaagtgtctattcatgtcctttgcccactttttaatggggttgtg-ttt------tttt---------ttttccttgtaaatttccaatggaatcaaacagagaactcagaaataagaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatgga i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212112 0 + 117903854 C e dasNov3.JH575754 439359 9705 - 2150887 I e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I e saiBol1.JH378121 19403438 0 - 31320352 C a score=13880.000000 s hg38.chr18_GL383571v1_alt 22262 4 + 198278 -gaat s panTro5.chr18 64974677 4 + 78221452 -gaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64097137 4 + 77229886 -gaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5316182 4 + 17472758 -gaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139355118 4 - 152096393 -gaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57311924 4 + 70235451 -gaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63003340 4 - 75711847 -gaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13556037 4 - 18804593 -gaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13172858 4 + 18905526 -gaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60002504 4 - 72318688 -gaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 336538 4 - 1517660 -gaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3436308 4 + 6513552 -gaaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105212112 4 + 117903854 ggaa- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403438 4 - 31320352 ggaa- i saiBol1.JH378121 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 439359 9705 - 2150887 I e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549368 3 - 14941987 I e cebCap1.NW_016107689v1 1592579 3 + 2203405 I a score=3632622.000000 s hg38.chr18_GL383571v1_alt 22266 374 + 198278 ggattccctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttctacaaaaagtaactcaagatgtattcaagaa--aaatgtaaacacaaaactgtagaaactctagaagta-tatctaggcaataccattaaggacataagcatgggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgagatctaattaaacaa-a-gagtttctgtacagcaaaagaaactatcatcagagtgaacaggcaaactacagagtggaagaaaatttttgcaatctatctgtctgacaaaggtctactatccagaatcta s panTro5.chr18 64974681 368 + 78221452 ggattccctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttctacaaaaagtaactcaagatgtattcaagac--aaatgtaaacacaaaactgtagaaactctagaagaa-tatctaggcaataccattaaggacataagcatgggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgagatctaattaaacaa-a-------ctgtacaggaaaagaaactatcatcagagcgaacaggcaaactacagagtggaagaaaatttttgcaatctatctgtctgacaaaggtctaatatccagaatcta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64097141 368 + 77229886 ggattccctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttctacaaaaagtaactcaagatgtattcaagac--aaatgtaaacacaaaactgtagaaactctagaagaa-tatctaggcaataccattaaggacataagcatgggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgagatctaattaaacaa-a-------ctgtacaggaaaagaaactatcatcagagcgaacaggcaaactacagagtggaagaaaatttttgcaatctatctgtctgacaaaggtctaatatccagaatcta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5316186 374 + 17472758 ggattccctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttctataaaaagtaattcaagatgtattcaagac--aaatgtaaacacaaaactgtagatactctagaagaa-tatgtaggcaataccattaaggacataagcatgggcaaagatttcattatgaaatcaccaaaagcaattgtaataaaagcaaagactgacaaatgagatctaattaaacaa-a-gagtttctgtacggcaaaataaactatcatcagagtgaacaggcaaactacagagtggaagaaaatttttgcaatctatctgtctgacaaaggtctaatatccagaatcta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139355122 377 - 152096393 ggattccctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaattggatcctttccttacaccttctacaaaaagtaactcaagatatattcaagacttaaatgtaaacacaaaactgtagaaactctagaagaa-tatctaggcaataccattcaggacataagcatgggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgagatctaattaaacaaca-gagcctctgtaccgcaaaagaaattatcgtcagagcgaacaggcaaactacagagtggaagaaaagttttgcaatctatctgtctgacaaaggtctaatatccagaatcta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57311928 378 + 70235451 gggattcctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttatacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaattatctaggcaataccattcaggacataggcaggggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgggatctaattaaacaa-aagagctactgtacagcaaaagaaactatcatcagagcgaacagacagcctacagagtggaggaaactttttgcaatctatctgtctgaaaaaggtctaatatccagaatcta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63003344 377 - 75711847 ggaattcctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttatacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaa-tatctaggcaataccattcaggacataggcaggggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgggatctaattaaacaa-aagagcttctgtacagcaaaagaaactatcatcagagcgaacagacagcctacagagtggaggaaactttttgcaatctatctgtctgaaaaaggtctaatatccagaatcta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13556041 377 - 18804593 ggaattcctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttatacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaa-tatctaggcaataccattcaggacataggcaggggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgggatctaattaaacaa-aagagcttctgtacagcaaaagaaactatcatcagagcgaacagacagcctacagagtggatgaaactttttgcaatctatctgtctgaaaaaggtctaatatccagaatcta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13172862 377 + 18905526 ggaattcctatttaataaatggtgctgggaaaaccggctagccatatgcagaaaattgaaactggatcccttccttacaccttatacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaa-tatctaggcaataccattcaggacataggcaggggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgggatctaattaaacaa-aagagcttctgtacggcaaaagaaactatcatcagagcgaacagacaacctacagagtggatgaaactttttgcaatctatctgtctgaaaaaggtctaatatccagaatcta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60002508 377 - 72318688 ggaattcctatttaataaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacactttatacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaa-tatctaggcaataccattcaggacataggcaggggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgggatctaattaaataa-aagagcttctgtacggcaaaagaaaccatcatcagagcgaacagacaacctacagagtggatgaaactttttgcaatctatctgtctgaaaaaggtctaatatccagaatcta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 336542 377 - 1517660 ggaattcctatttaataaatggtgctgggaaaaccggctagccatatgcagaaaattgaaactggatcccttccttacaccttatacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaa-tatctaggcaataccattcaggacataggcaggggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagcaaagattgacaaatgggatctaattaaacaa-aagagcttctgtacggcaaaagaaactatcatcagagcgaacagacaacctacagagtggatgaaactttttgcaatctatctgtctgaaaaaggtctaatatccagaatcta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3436312 377 + 6513552 ggaattcctatttaacaaatggtgctgggagaactggctagccatatgcagaaaattgaaactggatcccttccttacaccttaaacaaaaagtaactcaagatgtattaaagacttaaatgtaaacccaaaactatagaaactctagaagaa-catctaggcaataccattcaggacataggcaagggtaaagatttcattatgaaatcaccaacagcaattgcaacaaaagcaaagattgacaaatgagatctaatcaaacaa-aagagcttctgtacggcaaaagaaactatcatcagagcgaacagacaagctacagagtggatgaaaccttttgcaatctatctgtctgacaaaggtctaatatccagaatcta i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105212116 377 + 117903854 ggatttcctatttaataaaacttgctgaaagaactggttagccatatgcagaaaattgaagctagaccccttccttacactttataccaaaagtaactcaagatggattaaagacttaaatgtaaacccaaaactatagaagtgctagaaaaa-aatctaggcaataccattgaggacatgggcatgggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagctaagattgacaaatgagatctaactaaacaa-aagggcttctgtacagcaaaagaaactgtcatcagagcgaataggaagcctacagagtagaagaaaattgttgtaatctatttatctggcaaaggtctagtatccagaatcta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403442 376 - 31320352 ggatttcctatttaataaaaggtgctaggagaactggttaaccacatgcagaaaattgaaactagaccccttccttacactttataccaaaagtaactcaagatgga-taaagacttaaatgtaaattcaaaactatagaaatgctagaagaa-aatctaggcaataccattgaggacataggcatgggcaaagatttcattattaaattgccaaaagcaattgcaacaaaagtgaagactgacaaatgagatctaattaaacaa-aagggcttctgtacagtgaaagaaactatcatcagagtgtatgggcaacctacagagtagaagaaaattgttgtaatctattcatctggcaaaggtctaatatccagaatcta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1592582 377 + 2203405 ggatttcctatttaataaaaggtgctgggagaactggttagccatatgcagaaaattgaaactagaacccttccttacgctttataacaaaagtaactcaagatggattaaagacttaaatgtaaacccaaaactatagaaatgctagaagaa-aatctaggcaataccattgagaacataggcatgggcaaagatttcactatgaaattggcaaaagcaattgcaacaaaagcgaagattgacaaatgagatctaattaaacaa-aagggcttctgtacagcaaaagaaactatcatcagagtgaataggcaacctacagagtagaagaaaattgttgtaatctattcatctggcaaaggtctaatatccagaatcta i cebCap1.NW_016107689v1 I 3 C 0 s aotNan1.NW_018502140v1 3549371 376 - 14941987 ggatttcctatttaataaaaggtgctgggagaacaggttagccatatgcagaaatttggagctaga-cccttccttacactttataccaaaagtaactcaagatgaattaaagacttaaatgtaaacccaaaactatagaaatgctagaagaa-aatctaggcaatacgattgaggacataggcatgggcaaagatttcattatgaaatcaccaaaagcaattgcaacaaaagtgaagattgacaaatgagatctaattaaacaa-aagggcttctgtgcagcaaaagaaactatcatcagagcgaataggcaacccagagagtagaagaaaattgttgtaatctatttatctggcaaaggtctaatacctagaatcta i aotNan1.NW_018502140v1 I 3 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 439359 9705 - 2150887 I e canFam3.chr1 112275585 165 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=1409448.000000 s hg38.chr18_GL383571v1_alt 22640 136 + 198278 caaggaatttTCTATTTTTCTTCTCTGAATGCCTTTAGCATTTAGCTTACTTGCCCAGGGTTACTCCATGAT-GTAAGATGGCTGTTCGAACTCAGGGCGTCAGGTCAAATTGAGGACTGTAGTTACAGATTTTTCT s panTro5.chr18 64975049 136 + 78221452 caaggaatttTCTATTTTTCTTCTCTGAATGCCTTTAGCATTTAGCTTACTTGCCCAGGGTTACTCCATGAT-GTAAGATGGCTGTTCGAACTCAGGGCATCAGGTCAAATTGAGGACTGTAGTTACAGATTTTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64097509 136 + 77229886 caaggaatttTCTATTTTTCTTCTCTGAATGCCTTTAGCATTTAGCTTACTTGCCCAGGGTTACTCCATGAT-GTAAGATGGCTGTTCGAACTCAGGGCATCAGGTCAAATTGAGGACTGTAGTTACAGATTTTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5316560 135 + 17472758 caaggaatttTCTATTTTTCTTCTCTGAATGCCTTTAGCATTTAACTTACTTGCCCAGGGTTACTCCATGAT-GTAAGATGGCTGTTCGAACTCAGGGCATCAGGTCAAATTGAGGACTGTAGTTACAGA-TTTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139355499 135 - 152096393 caaggaatttTCTATTTTTCTTCTCTGAATGCCTTTAGCATTTGGCTTACTTGCCCAGGGTTACTCCATGAT-GTAAGATGGCTGTTCGAACTCAGAGCATCAGGTCAAATTGAGGACT-TAATTACAAATTTTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57312306 135 + 70235451 caaggaaTtttctatttttcttctctg-atgcctttagcatttgacttacttgcccaggtttacaacatgat-gtaagatggctgctcaaactcagggcatcaGGTCAAACTGAGGACTGTAATTACAGATTTTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63003721 135 - 75711847 caaggaatttTCTATTTTTCTTCTCTG-ATGCCTTTAGCATTTGACTTACTTGCCCAGGTTTACAACATGAT-GTAAGATGGCTGCTCAAACTCAGGGCATCAGGTCAAACTGAGGACTGTAATTACAGATTTTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13556418 135 - 18804593 caaggaaTtttctatttttcttctctg-atgcctttagcatttgacttacttgcccaggtttacaacatgat-gtaagatggctgctcaaactcagggcatcaGGTCAAACTGAGGACTGTAATTACAGATTTTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13173239 135 + 18905526 caaggaaTtttctatttttcttctctg-atgcctttagcatttgacttacttgcccaggtttacaacatgat-gtaagatggctgctcaaactcagggcatcaGGTCAAACTGAGGACTGTAATTACAGATTTTTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60002885 135 - 72318688 caaggaatttTCTATTTTTCTTCTCTG-ATGCCTTTAGCATTTGACTTACTTGCCCAGGTTTACAACATGAT-GTAAGATGGCTGCTCAAACTCAGGGCATCAGGTCAAACTGAGGACTGTAACTACAGATTTTTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 336919 135 - 1517660 caaggaaTtttctatttttcttctctg-atgcctttagcatttgacttacttgcccaggtttacaacatgat-gtaagatggctgctcaaactcagggcatcaGGTCAAACTGAGGACTGTAATTACAGATTTTTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3436689 135 + 6513552 taaggaatttTCTATTTTTCTTGTCTG-ATGCCTTTAGCATTTGGCTTACTTGCCCAGGTTTACAACATGAT-GTAAGATGGCTGCTCGAACTCAGGGCATCAGGTCAAACTGAGGACTGTAATTACAGATTGTTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105212493 126 + 117903854 caaggaatttTTTATTTTTCTTCTCTG-ATGCCTTT---------ATTACTTGCTCAGGGTTACTCTATGAT-GTAAGATGGCTGCTTGAACTCAGGGCATCAGATCAAATGAAGGACTACAATTACAGATTTTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403818 135 - 31320352 caaggaatttTCTATTTTTCTTCTCTG-ATGCCTTTAGCATTTGGATTACTTGACCAGGGTTATTCTATGAT-GTAAGATGGCTGCTTGAACTCAGGGCATCAGATCAAATGAAGGACTGCAATTACAGATTTTTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1592959 135 + 2203405 cagggaaTtttctatttttcttctccg-atgcctttagcatttggcttacttgcccagggttattctatgat-gtaagatggctgcttgaactcagggcatcagatcAAATGAAGGACTGCAATTACAGATTTTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3549747 135 - 14941987 ccaggaattttctatttttcttctctg-atgcctttagcatttggcttacttgcccagggttactctctgat-gtaagatggctacttgaactcagggcatcagatTAAATGAAGGACTGCAATTACAGATTTTTCT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112275750 136 - 122678785 caaagacttttctatttttctcctcta-atatcgttagtattttgcttataagccaaaggttattctctgataataaaatgtctgctggaactcagagcatcaAGTCAAACCAAGGACTGTAATTACAAATTTTCCT i canFam3.chr1 I 165 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 439359 9705 - 2150887 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=661380.000000 s hg38.chr18_GL383571v1_alt 22776 59 + 198278 AAACCACAAGAAGAAATATACAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT s panTro5.chr18 64975185 59 + 78221452 AAACCACAAGAAGAAATATACAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64097645 59 + 77229886 AAACCACAAGAAGAAATATACAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5316695 59 + 17472758 GAACAACAAGAAGAAATATACAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139355634 59 - 152096393 AAACCACAAGAAGAAATATACAAATGTGCTGCAGAATT----ATTTCATTAGATATTTATTGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57312441 59 + 70235451 AAACCACAAGAAGAAATATATAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63003856 59 - 75711847 AAACCACAAGAAGAAATATATAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13556553 59 - 18804593 AAACCACAAGAAGAAATATATAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13173374 59 + 18905526 AAACCACAAGAAGAAATATATAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60003020 59 - 72318688 AAACCACAAGAAGAAATATATAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 337054 59 - 1517660 AAACCACAAGAAGAAATATATAAATGTGCTGCAGAATT----ATTTTATTAGATATTTATTGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3436824 59 + 6513552 AAACCACAAGAAGAAATATATACATGTGCTGCAGAATT----ATTGTATTAGATATTTATTGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105212619 59 + 117903854 AAACCACAAGAAGGAATACATAAATGTGCAGTAGAATT----ATTTTATTAGACATTTATTGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19403953 58 - 31320352 -AACCACAAGAAGAAATACATAAATGTGCCATAGAATT----ACTTTATTAGACATGTATTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1593094 55 + 2203405 AAACCACAAGAAGAA----ATAAATGTGCCATAGAATT----ATTTTATTAGACATTTATTGT i cebCap1.NW_016107689v1 C 0 I 2858 s aotNan1.NW_018502140v1 3549882 59 - 14941987 AAACCACAGGAAGAAATATATAAATGTGCAGTAGAATT----ATTTTATTAGATATTTATTGT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112275886 63 - 122678785 AAGCCACAAGAAAAAATACAGAATTTTGCTGCAGAATTCAGGATTTTATTGGAGATGTATTAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 449064 58 - 2150887 AAGCCAAATGAAGGCGTATA-----ATCCCGATGCATTCAGAATTTTATTAGGCACTTATTGT i dasNov3.JH575754 I 9705 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=109158.000000 s hg38.chr18_GL383571v1_alt 22835 11 + 198278 TCTGGACTACA s panTro5.chr18 64975244 11 + 78221452 TCTGGACTACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64097704 11 + 77229886 TCTGGACTACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5316754 11 + 17472758 TCTGGACTACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139355693 11 - 152096393 CCTGGACCACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57312500 11 + 70235451 CCTGGACTACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63003915 11 - 75711847 CCTGGACTACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13556612 11 - 18804593 CCTGAACTACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13173433 11 + 18905526 CCTGGACTACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60003079 11 - 72318688 CCTGGACTACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 337113 11 - 1517660 CCTGGACTACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3436883 11 + 6513552 CCTGGACTACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105212678 11 + 117903854 CCTAGGCTACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19404011 11 - 31320352 CCTAGGCTACA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3549941 11 - 14941987 CCTAGGCTACA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112275949 11 - 122678785 TTTGCATTATA i canFam3.chr1 C 0 I 4928 s dasNov3.JH575754 449122 11 - 2150887 CCTGGACTACG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e otoGar3.GL873546 11205458 2397 - 20685099 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I a score=10920.000000 s hg38.chr18_GL383571v1_alt 22846 1 + 198278 A s panTro5.chr18 64975255 1 + 78221452 A i panTro5.chr18 C 0 I 3680 s panPan2.chr18 64097715 1 + 77229886 A i panPan2.chr18 C 0 I 3676 s gorGor5.CYUI01014964v1 5316765 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 I 3688 s nomLeu3.chr4 139355704 1 - 152096393 A i nomLeu3.chr4 C 0 I 3668 s rheMac8.chr18 57312511 1 + 70235451 A i rheMac8.chr18 C 0 I 2871 s macFas5.chr18 63003926 1 - 75711847 A i macFas5.chr18 C 0 I 2840 s macNem1.NW_012016688v1 13556623 1 - 18804593 A i macNem1.NW_012016688v1 C 0 I 2821 s cerAty1.NW_012001075v1 13173444 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 I 2837 s chlSab2.chr18 60003090 1 - 72318688 A i chlSab2.chr18 C 0 I 2856 s manLeu1.NW_012106698v1 337124 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 I 2862 s colAng1.NW_012115433v1 3436894 1 + 6513552 A i colAng1.NW_012115433v1 C 0 I 2753 s calJac3.chr13 105212689 1 + 117903854 A i calJac3.chr13 C 0 I 3143 s saiBol1.JH378121 19404022 1 - 31320352 A i saiBol1.JH378121 C 0 I 2907 s aotNan1.NW_018502140v1 3549952 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 I 2869 s dasNov3.JH575754 449133 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I a score=91.000000 s hg38.chr18_GL383571v1_alt 22847 1 + 198278 T s dasNov3.JH575754 449134 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212690 3143 + 117903854 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549953 2869 - 14941987 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I e saiBol1.JH378121 19404023 2907 - 31320352 I e colAng1.NW_012115433v1 3436895 2753 + 6513552 I e manLeu1.NW_012106698v1 337125 2862 - 1517660 I e chlSab2.chr18 60003091 2856 - 72318688 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I e macNem1.NW_012016688v1 13556624 2821 - 18804593 I e macFas5.chr18 63003927 2840 - 75711847 I e rheMac8.chr18 57312512 2871 + 70235451 I e nomLeu3.chr4 139355705 3668 - 152096393 I e gorGor5.CYUI01014964v1 5316766 3688 + 17472758 I e panPan2.chr18 64097716 3676 + 77229886 I e panTro5.chr18 64975256 3680 + 78221452 I a score=14648.000000 s hg38.chr18_GL383571v1_alt 22848 16 + 198278 actct-gacagtagttt s panTro5.chr18 64978936 16 + 78221452 actct-gacagtagttt i panTro5.chr18 I 3680 C 0 s panPan2.chr18 64101392 16 + 77229886 actct-gacagtagttt i panPan2.chr18 I 3676 C 0 s gorGor5.CYUI01014964v1 5320454 16 + 17472758 actct-gacagtagttt i gorGor5.CYUI01014964v1 I 3688 C 0 s nomLeu3.chr4 139359373 16 - 152096393 actct-gacattggttt i nomLeu3.chr4 I 3668 C 0 s dasNov3.JH575754 449135 16 - 2150887 -CTATAGAAACTAGTCT i dasNov3.JH575754 C 0 I 3941 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212690 3143 + 117903854 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549953 2869 - 14941987 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I e saiBol1.JH378121 19404023 2907 - 31320352 I e colAng1.NW_012115433v1 3436895 2753 + 6513552 I e manLeu1.NW_012106698v1 337125 2862 - 1517660 I e chlSab2.chr18 60003091 2856 - 72318688 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I e macNem1.NW_012016688v1 13556624 2821 - 18804593 I e macFas5.chr18 63003927 2840 - 75711847 I e rheMac8.chr18 57312512 2871 + 70235451 I a score=667725.000000 s hg38.chr18_GL383571v1_alt 22864 748 + 198278 cttttgcagtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttacggttttaggtctgatatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatc--gtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaactttgtcatagatcagatggttgtagatgtgtggtacttcttctgagggctctgttctgttccattggtctatatctctgttttggtagcagtaccatgctgttttggttactgtagccttgtagtataggttgaagtcaggtagcatgatgcctccagctttgttcttttggcttaggattgtcttgacaatgcgggctctttttgggttgcatatgaactttaaagtagttttttccaattctgtgaataaagtcattggtagcttgatggggatggtattgaatctataaattaccttgggcggtatggccattttcacaatattgattcttcctagccatgagcatgaaatgttcttccatttgtttgtgtcctgttttattttgttaagcagtggtttgtaattctccttgaagagatccctcacatctcttg s panTro5.chr18 64978952 748 + 78221452 cttttgcagtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcttgaatggtattgcctaggttttcttctagggtttttatggttttaggtctgatatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatt--gtttcagctttctccatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaacttcgtcaaagatcagatggttgtagatgtgtggtacttcttctgagggctctgttctgttccatttgtctatatctctgttttggtaccagtaccatgctgttttggttactgcagccttgtagtatagtttgaagtcaggtagtgtgatgcctccagctttgttcttttggcttaggattgtcttgacaatgcgggctctttttgggttgcatatgaactttaaagtagttttttccaattctgtgaataaagtcattggtagcttgatggggatggtattgaatctataaattacgttgggcagtatggccattttcacaatattgattcttcctagccatgagcatggaaagttcttccatttgtttgtgtcctgttttattttgttaagcagtggtttgtaattctccttgaagaggtccttcacatctcttg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64101408 748 + 77229886 cttttgcggtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcttgaatggtattgcctaggttttcttctagggtttttatggttttaggtctgatatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatt--gtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaacttcgtcaaagatcagatggttgtagatgtgtggtacttcttctgagggctctgttctgttccatttgtctatatctctgttttggtaccagtacgatgctgttttggttactgcagccttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttcttttggcttaggattgtcttgacaatgcgggctctttttgggttgcatatgaactttaaagtagttttttccaattctgtgaataaagtcattggtagcttgatggggatggtattgaatctataaattacgttgggcagtatggccattttcacaatattgattcttcctagccatgagcatggaaagttcttccatttgtttgtgtcctgttttattttgttaagcagtggtttgtaattctccttgaagaggtccttcacatctcttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5320470 748 + 17472758 cttttgcagtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctgatatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatc--gtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttctgtcaactttgtcaaagatcagatggttgtagatgtgtggtaccttttctgagggctctgttctgttccattggtctatatctctgttttggtagcagtaccatgctgttttggttactgtagccttgtagtataggttgaagtcaggtagcatgatgcctccagctttgttcttttggcttaagattgtcttgacaatgcgggctctttttgggttgcatatgaactttaaagtagttttttccaactctgtgaataaagtcattggtagcttgatggggatggtattgaatctataaattaccttgggtggtatggccattttcacaatattgattcttcctagccatgagcatggaatgttcttccatttgtttgtgtcctgttttattttgttaagcagtggtttgtaattctccttgaagagatccctcacatctcttg i gorGor5.CYUI01014964v1 C 0 I 53 s nomLeu3.chr4 139359389 750 - 152096393 cttttgcagtgcagaagctctttagtttaattagatcccatttgtcaaggttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaatatttaagtctttaatccctcttgaattaatttttgtataaggtgtaaggaagggatccactttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaactttgtcaaagatcagatggttgtagatgtgtggtactatttctgagggctctgttctgttccattgatctatatctctgttttggtagcagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcatgatgcctccaactttgttcttttggcttaggattgtcttggcaatgtgggctctttttgggttgcatatgaactttaaagttgttttttccaattctgtgaagaaaatcattggtagcttgatggggatggcataaaatctataaattaccttaagcagtatggccatgttcacaatattgattcgtcctatccataagcatggaatgttcttccatttgtttgtgtcctcttttattttgttaagcagtggtttgtaattctccttgaagaggtccttcacatttcttg i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212690 3143 + 117903854 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549953 2869 - 14941987 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I e saiBol1.JH378121 19404023 2907 - 31320352 I e colAng1.NW_012115433v1 3436895 2753 + 6513552 I e manLeu1.NW_012106698v1 337125 2862 - 1517660 I e chlSab2.chr18 60003091 2856 - 72318688 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I e macNem1.NW_012016688v1 13556624 2821 - 18804593 I e macFas5.chr18 63003927 2840 - 75711847 I e rheMac8.chr18 57312512 2871 + 70235451 I a score=2238.000000 s hg38.chr18_GL383571v1_alt 23612 4 + 198278 taag s panTro5.chr18 64979700 4 + 78221452 taag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64102156 4 + 77229886 taag i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139360139 4 - 152096393 taag i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212690 3143 + 117903854 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549953 2869 - 14941987 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I e saiBol1.JH378121 19404023 2907 - 31320352 I e colAng1.NW_012115433v1 3436895 2753 + 6513552 I e manLeu1.NW_012106698v1 337125 2862 - 1517660 I e chlSab2.chr18 60003091 2856 - 72318688 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I e macNem1.NW_012016688v1 13556624 2821 - 18804593 I e macFas5.chr18 63003927 2840 - 75711847 I e rheMac8.chr18 57312512 2871 + 70235451 I e gorGor5.CYUI01014964v1 5321218 53 + 17472758 I a score=3681755.000000 s hg38.chr18_GL383571v1_alt 23616 4208 + 198278 ttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttagctctctgtttgtctgttattggtgtataggaatgcctgtgatttttgcacattgattttgtatcctgagaatttgctgaagttgcttatcagcttaaggagattttgggctgagacaatggggtttcctaaatatacaatcatgtcatctgcaaacagggacaatttgatttcctctttttctaattgaataccctttatttctttctcctgccttattgacctggccagaacttccaacactacgttgtataggagttgtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatacgtcccatcaatacctaatttattgagagtttttagcatgaaaggctgttgaattttgtggaagaacttttctgcatctattgagacaatcatgtggtttttgtctttggttatgtttatacgatggattacatttattgatttgcatatgttgaacccgccttgcatcacagggatgaagcccacttgatcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatatttgcatcgatgttcatcagtgatattggtctaaaattctctttt------atgtctctgccaggctttggtttccggatgatgctggcctcataaaatgagttagggaggattacctcttttcctattcattggaatattttcagaaggaatagtaccagctcctctttgtacctctggtagaattcagctgtgaatctgtctggtcctggacatgttttggttgataggctcttaattattgcctcaatttcagagcctgttattagtctattcagggattcaacttcttcctggtttagtcttgggagggtgtatgtgtccaggaatttatctatttattctagattttctagtttatttgtgtagaggtgttt-atagtattctctgatggtagtttgcatctctgtgggatcgatggtgatatcccctttatcattttttattgtgtctatttgattcttctctctt---ttcttcattagtcttgctagcgatctatcaattttgttgatcttttcaaaaaaattagctcctggattcactgattttttgaagggtttttttgtgtctctatctccttcagttctgctctgatcttagttatttctttccttctgctagcttttgaatgtgtttgctcttgcttctctagttcttttaattgtgatgttaaggtgtcaattttagatcttccctgctttcttttgtgggcatttagtgctataaatttccctctacacattgccttaaatttgtcccagagattctggtatgttgtgtctttgttctcattggtttcaaggaacatctttatttctgctttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttattaatcctgagttctagtttgattgcactgtggtctgaaagacagtttgttataatttctgttcttttatgtttgctgaggagtgctttacttccaactatgtggtcaattttggaataagtgtgtgatgtggtgctgagaagaatgtatattctgttgatttggggtggagagttttgtagatatgtattaggtctgcttggtgcagagctgagttcaattcctggatatgtttgttaactttctgccttgtggatctgtctaatgttgacagtggggtgttaaagtctcccattattattgcgtgagagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattgggtgcatatatattgaggatagttagc----cttgttgaattgatccctttaccattatgtaatggccttctttgtctcttctgatctttgttggtttaaagtctgttttatcagagactaggattgcaacccctgctttttt-------tttgttttccatttgcttggtagattttcctccatccctttattttgagcctatgtgtgtctctgcacatgagatgggtcttctgaatatagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcatcatgatattagctagttattttgctcattagttgatgcagtttcttcctagccttgatgatctttacaatttggcatgtttttgctgtagctggtactgcttgttcctttccatgtttagtgcttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaaggattttatttctccttcacttatgaagcttagtttggctgggtatgaaattctgggttaaaaattcttttctttaagaatgttgaatattggcccccactgtcttctggcttgtagagtttttgtcaagagatctgctgttagtctgattggctttcctttgtgggtaacccaacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatatgacaattatgtgtcttggagttgctcttctcagggagtatctttgtggtgttctctgtatttactgaatttgaatgttggcctgccttgctaggttggggaagttctcctggataatatcctgaagagtgttttccaacttggttcaattctccccatcactttcaggtacaccaatcagatatagatttggtcttttcacgtagtcccatatttcttggaggctttgttcatttctttttactcttttttctctaaacttctcttctcgcttcagttcatttatttgatcttcaatcactgataccctttcttc---------aaatcagctactgaagcttgtgcatgtgtcacgtagttctcataccatggttttcagctccgtcaggtcatttaaggtcttctctacgctggttattctagtcagacattcgtctaatcttttttcaaggtttttagcttctttgtgatgggttcaaacaccctcctttagctcagagaagtttgttattaccaatcttctaaagccttcttctctcaaatcgtcagagtcattctctgtccagctttgttccattgctggtaaggagctgtgttccttt---ggagaagaggcactctgatttttagaattttcagcttttctgctctggtttctccccccttctttgtgg-tttatctacctttggtctttgataatgttgatgtacagatggggttttggtgtggatgccctttctgtttgttagttttccttctaacagtcaggaccctcagctacaggtctgttggagtttgctgcaggtccgcttcagaccctgtttgcctgggtatcaccagcggaggctgcagaaccgtaaatattgcagaatggtaaatgttgctgcctgatcattcctctggaagcttcatctcagaggggcactcggccgtgtgaggtgtcagtcagcccctactgggagatgcctcccagttaggctacttgggggtcagggaccgacttgaagaggcagtctttccattctcagatctcaaactccgttatggaagatccactactctcttcaaagctgtcagacaaggacgtttaagtctgcagaagtttctgctgccttttgttcagctatgccctgcccccagaggtgaagtctgcagaggcaggcaggcctccttgagctgcggtgggctccacccagttcgagcttcctggctgccttgtttacctactcaagcctcagcaagggcgggcacccctcccccagcctcgctgccaccttgcagttcggtctcagactgctgagctagcagtgagcaaagctccatgggcgtgggaccctctgagccaggcgtgggatatagtctcctggtgtgctctttgctcagttggaaatgcagaaatcacccgtcttctatgtcactcatgctgggagctgtagactggagctgttcctattcggccatcttgaaacctcccACCTCAATTGTGC s panTro5.chr18 64979704 4220 + 78221452 ttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttagctctctgttcgtctgttattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgagaatttgctgaagttgcttatcagcttaaggagattttgggctgagacgatggggttttctaaatatacaatcatgtcatctgcaaacagggacaatttgatttcctcttttcctaattgaataccctttatttctttctcctgcctgattgacctggccagaacttccaacactacgttgaataggagttgtgagagagggcatccctgtcttgtgccagttatcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatacatcccgtcaatacctaatttattgagagtttttagcatgaaaggctgttgaattttgtcgaagaccttttctgcatctattgagataatcatgtggtttttgtctttgtttatgtttatatgatggattacatttattgatttgcatatgttgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgatgtgctgctgaattcggtttgccagtattttattgaggatttttgcatcgatgttcatcagggatattggtctaaaattctctttttttgttatgtctctgccaggctttggtttcaagatgatgctggtctcataaaatgaattagggaggattacctcttttcctattcgttggaatattttcagaaggaatagtaccagctcctctttgtacctctggtagaattcggctgtgaatccgtctggtcctggacatgttttggttgataggctcttaattattgcctcaatttcagagcctgttattagtctattcagggattcaacttcttcctggtttagtcttgggagggtgtatgtgtccaggaatttatccatttcttctagattttctagtttatttgtgtagaggtgttttatagtattctctgatggtagtttgtatctcttagggatcaatggtgatatcccctttatcattttttattgtgtctatttgattcttctctttt--cttctttattagtcttgctagagatctatcaattttgttgatcttttcaaaaaaatcagctcctagattcactgattttttgaagggtttttt-gtgtctctatctctttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttctctagttattttaattgtgatattaaggtgtcaattttagatctctcctgctttcttttgtgggcatttagtgctacaaatttccctctacacactgccttaaatgtgtcccagagattctggtatgttgtgtctttgttctcactggtttcaaggaacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttcttaatcctgagttctagtttgattgcactgtggtctgagagacagtttgttataatttctgttcttttatgtttgctgaggagtgctttacttccaactatgtggtcaattttggaataagtgtgtgatgtggtgctgagaaaaatgtatattctgttgatttggggtggagagttctttagatgtgtatcaggtctgcttggttcagagctgagttcaattcctggatatgcttgttaactttctgcctcgtggatctgtctaatgtt-acagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattaggtgcatatatatttaggatagttacc---tcttgttgaattgatccctttaccattatgtagtggccttctttgtctcttctgatctttgtgggtttaaagtctgtttcatcagagactaggattgcaacccctgctttttt-------tttgttttccatttgcttggtagatcttcctccatccctttattttgagcctatgtgtgtctctgcacatgagatgggtctcctgaatatagcacaccgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatattagctagttattttgctcattagttgatgcagtttcttcctagcctcgatggtct--acaatttggcatgtttttgcagtggctggtactgcttgttcctttccatgtttagtgcttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcagcattttcttgtctgtaaaggattttatttctccttcacttatgaagcttagtttggctgggtatgaaattctgagttaaaaattcttttctttaagaacgttgaatattggcccccactgtcttctggcttgtagagtttctgccaagagatctgctgttagtctgattgtctttcctttgtgggtaacccaacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatatgacaattatgtgtcttggagttgctattctcagggagtatctttgtggtgttctctgtatttcctgaatttgaatgttggcctgccttgctaggttggggaagttctcctggataatatcctgaagagtgttttccaacttggctcaattctccccatcactttcaggtacaccaatcagatgtagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttactctttattctctaaacttctcttctcgcttcatttcatttatttgatcttccatcagtgataccctttcttccagttgatcaaatcggctactgaagcttgtgcatgtgtcacgtagttctcatgccatggctttcagctccatcaggtcatttaaggtcttctctacgctggttattctagtcagacattcgtctaatcttttttcaaggtttttagcttctttgcgatgggttcaaacaccctcctttagctcggagaagtttcttattaccagtcttctaaagccttcttctctcaaatcatcaaagtcattctctgtccagctttgttccactgctggtaaggagctgtgttccttt---ggagaagaggctctctgatttttagaattttcagcttttctgctctggtttctcccccttt--ttgtgg-tttatctacctttggtctttgataatgttgatgtacagatggggttttggtgtggataccctttctgtttgttaattttccttctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtctgcttcagaccctgtttgcctgggtatcaccagcggaggctgcagaactgtaaatattgcagaacagtaaatgttgctgcctgatcgttcctctggaagcttcatctcagaggggcactcggccgtgtgaggtgtcagtcagcccctactgggaggtgcctcccagttaggctacttgggggtcagggaccgacttgaagaggcagtctttccattctcagatctcaaactccattatgggagatccactactctcttcaaagctgtcagacagggacgtttaagtctgcagaagtttctgctgccttttgttcagctatgccctgcccccagaggtgaagtctgcagaggcaggcaggcctccttgagctgcggtgggctccacccagttagagcttcctggctgccttgtttacctactcaagcctcagcaagggcgggcgcccctcccccagcctcgctgccaccttgcagttcggtctcagactgctgagctagcagtgagcaaagctccatgggcgtgggaccctccgagccagacgtggaatataatctcctggtgtgctctttgctcagttggaaatgcagaaatcacccgtcttctacgtcgctcatgctgggagctgtagactggagctgttcctattcggccatcttggaacctcccACCTCAATTGTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64102160 4219 + 77229886 ttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttagctctctgtttgtctgttattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgagaatttgctgaagttgcttatcagcttaaggagattttgggctgagacgatggggttttctaaatatacaatcatgtcatctgcaaacagggacaatttgatttcctcttttcctaattgaataccctttatttctttctcctgcctgattgacctggccagaacttccaacactacgttgaataggagttgtgagagagggcatccctgtcttgtgccagttatcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatacatcccatcaatacctaatttattgagagtttttagcatgaaaggctgttgaattttgtcgaagaccttttctgcatctattgagataatcatgtggtttttgtctttgtttatgtttatatgatggattacacttattgatttgcatatgttgaaccagccttgcatcccaggtatgaagcccacttgatcatggtggataagctttttgatgtgctgctgaattcggtttgccagtattttattgaggatttttgcatcgatgttcatcagggatattggtctaaaattctctttttttgttatgtctctgccaggctttggtttcaagatgatgctggtctcataaaatgaattagggaggattacctcttttcctattcgttggaatattttcagaaagaatagtaccagctcctctttgtacctctggtagaattcggctgtgaatccgtctggtcctggacatgttttggttgataggctcttaattattgcctcaatttcagagcctgttattagtctattcagggattcaacttcttcctggtttagtcttgggagggtgtatgtgtccaggaatttatccatttcttctagattttctagtttatttgtgtagaggtgttttatagtattctctgatggtagtttgtatctcttagggatcaatggtgatatcccctttatcattttttattgtgtctatttgattcttctctttt--cttctttattagtcttgctagagatctatcaattttgttgatcttttcaaaaaaatcagctcctagattcactgattttttgaagggtttttt-gtgtctctatctctttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttctctagttattttaattgtgatattaaggtgtcaattttagatctctcctgctttcttttgtgggcatttagtgctacaaatttccctctacacactgccttaaatgtgtcccagagattctggtatgttgtgtctttgttctcactggtttcaaggaacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttcttaatcctgagttctagtttgattgcactgtggtctgagagacagtttgttataatttctgttcttttatgtttgctgaggagtgctttacttccaactatgtggtcaattttggaataagtgtgtgatgtggtgctgagaaaaatgtatattctgttgatttggggtggagagttctttagatgtgtattaggtctgcttggttcagagctgagttcaattcctggatatgcttgttaactttctgcctcgtggatctgtctaatgtt-acagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattaggtgcatatatatttaggatagttacc---tcttgttgaattgatccctttaccattatgtaatggccttctttatctcttctgatctttgtgggtttaaagtctgtttcatcagagactaggattgcaacccctgtcttttt-------tttgttttccatttgcttggtagatcttcctccatccctttattttgagcctatgtgtgtctctgcacatgagatgggtctcctgaatatagcacaccgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatattagctagttattttgctcattagttgatgcagtttcttcctagcctcgatggtct--acaatttggcatgtttttgcagtggctggtactgcttgttcctttccatgtttagtgcttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcagcattttcttgtctgtaaaggattttatttctccttcacttatgaagcttagtttggctgggtatgaaattctgagtttaaaattcttttctttaagaacgttgaatattggcccccactgtcttctggcttgtagagtttctgccaagagatctgctgttagtctgattgtctttcctttgtgggtaacccaacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatatgacaattatgtgtcttggagttgctcttctcagggagtatctttgtggtgttctctgtatttcctgaatttgaatgttggcctgccttgctaggttggggaagttctcc-ggataatatcctgaagagtgttttccaacttggctcaattctccccatcactttcaggtacaccaatcagatgtagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttactcttttttctctaaacttctcttctcgcttcatttcatttatttgatcttccatcactgataccctttcttccagttgatcaaatcggcttctgaagcttgtgcatgtgtcacgtagttctcatgccatggctttcagctccatcaggtcatttaaggtcttctctacgctggttattctagtcagacattcgtctaatcttttttcaaggtttttagcttctttgcgatgggttcaaacaccctcctttagctcggagaagtttcttattaccaatcttctaaagccttcttctctcaaatcatcaaagtcattctctgtccagctttgttccactgctggtaaggagctgtgttccttt---ggagaagaggctctctgatttttagaattttcagcttttctgctctggtttctcccccttt--ttgtgg-tttatctacctttggtctttgataatgttgatgtacagatggggttttggtgtggataccctttctgtttgttaattttccttctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtctgcttcagaccctgtttgcctgggtatcaccagcggaggctgcagaactgtaaatattgcagaacagtaaatgttgctgcctgatcgttcctctggaagcttcatctcagaggggcactcggcagtgtgaggtgtcagtcagcccctactgggaggtgcctcccagttaagctacttgggggtcagggaccgacttgaagaggcagtctttccattctcagatctcaaactccattatgggagatccactactctcttcaaagctgtcagacagggacgtttaagtctgcagaagtttctgctgccttttgttcagctatgccctgcccccagaggtgaagtctgcagaggcaggcaggcctccttgagctgcggtgggctccacccagttagagcttcctggctgccttgtttacctactcaagcctcagcaagggcgggcgcccctcccccagcctcgctgccaccttgcagttcggtctcagactgctgagctagcagtgagcaaagctccatgggcgtgggaccctccgagccagacgtggaatataatctcctggtgtgctctttgctcagttggaaatgcagaaattacccgtcttctacgtcgctcatgctgggagctgtagactggagctgttcctattcggccatcttggaacctcccACCTCAATTGTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5321271 4223 + 17472758 ttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgagaatttgctgaagttgcttatcagcttaaggagattttgggctgagacaatggggttttctaaatatacaatcatgtcatctgcaaacagggacaatttgatttcctcttttcgtaattgaataccctttatttttttctcctgcctgattgacctggccagaacttccaacactacgttgaataggagttgtgagagaggacatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatacgtcccatcaatacctaatttattgagagtttttagcatgaaaggctgttgaattttgtcaaagaccttttctgcatctattgagataatcatgtggtttttgtctttggttatgtttatacgatggattacatttattgatttgcatatgttgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatatttgcatcgatgttcatcagggatattggtctaaaattatctttttttgttatgtctct--caggctttggtttcaggatgatgctggcctcataaaatgagttagggaggattacctcttttcctattcattggaatattttcagaaggaatagtaccagctcctctttgtacctctggtagaattcagctgtgaatccgtctggtcctggacatgttttggttgataggctcttaattattgcctcaatttcagagcctgttattagtctattcagggattcaacttcttcctggtttagtcttgggagggtgtatgtgtccaggaatttatctatttattctagattttctagtttatttgtgtagaggtgttt-atagtattctctgatagtagtttgtatctctgtgggatcgatggtgatatcccctttatcattttttattgcgtctatttgattcttctctcttttcttctttattagtctttctagtgatctatcaattttgttgatcttttaaaaaaaatcagctcctggattcactgattttttgaagggtttttt-gtgtctctatctccttcagttctgctctgatcttagttatttcttgccttctgctggcttttgaatgtgtttgctcttgtttctctagttcttttaattgtgatgttaaggtgtcaattttagatctttcctgctttcttttgtgggctttaagtgctataaatttccctctacacattgccttaaatgtgtcccagagattctggtatgttgtgtctttgttctcattggtttcaaggaacatctttatttctgccttcatttcgttatgtacccagtagtcattaaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttgttaatcctgagttctagtttgattgcactgtggtctgaaagacagtttgttataatttctgttcttttatgtttgctgaggagtgctttacttccaagtatgtagtcaattttggaataagtgtgtgatgtgttgctgagaaaaatgtatattctgttgatttggggtggagagttctgtagatgtgtattaggtctgctttgtgcagagctgagttcaattcctggatatgtttgttaactttctgcctcatggatctgtctaatgttgacagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattgggtgcatatatattgaggatagttagc---tcttgttgaattgatccctttaccattatgtaatggccttctttgtctcttctgatctttgttggtttaaagtctgttttatcagagactaggattgcaacccctgctttttt-------tttgttttccatttgcttggtagatcttcctccatccctttattttgagcctatgtgtgtctctgcacatgagatgggtcttctgaatatagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcatcatgatattagctagttattttgctcattagttgatgcagtttcttcctagccttgatggtctttacaatttggcatgtttttgcagtggctggtactgcttgttcctttccatgtttagtgcttccttcaggagctcttgtaaggcaggcctgatggtgacaaaatctctcagcattttcttgtctgtaaaggattttatttctccttcacttatgaagcttaatttggctgggtatgaaattctgggttaaaaattattttctttaagaatgttgaatattggcccccactgtcttctggcttgtagagtttctgtcaagagatccactgttagtctgattggctttcctttgtgggtaacccaacctttctctctggctgcccttaacattttttcctccatttcaactttggtgaatatgacaattatgtgtcttggagttgctcttctcagggagtatctttgtggtgttctctgtatttactgaattagaatgttggcctgccttgctaggttggggaagttctcctggataatatcctgaagagtgttttccaacttggttcaattttccccatcactttcaggtacaccaatcagatgtagatttggtcttttcacgtagtcccatatttcttggaggctttgttcatttccttttactctttcttctctaaacttcccttctcacttcatttcatttatttcatcttcaatcactgataccctttcttccagttgatcaaatcggctactgaagcttgtgcatgtgtcacgtagttctcataccatggctttcagctccatcaggtcatttaaggtctcctctacgctggttattctagtcagacattcgtctaatcttttttcaaggtttttagcttctttgcgatgggttcaaacaccctcctttagctcggagaagtttgttattaccaatcttctaaagccttcttctctcaaatcgtcaaagtcattctctgtccagctttgttccattgctggtaaggagctgtgttccttt---ggagaagaggcactctgatttttagaattttcagcttttctgctctggtttctcccccttc-tttgtgg-tttatctacctttggtctttgataatgttgatgtacagatggggttttagtgtggatgccctttctgtttgttagttttccttctaatagtcaggaccctcagctacaggtctgttggagtttgctggaggtccgcttcagaccctgtttgcctgggtatcaccagcggaggctgcagaaccgtaaatattgcagaatggtaaatgttgctgcctgatcgttcctctggaagcttcatctcagaggggcactcggccgtgtgaggtgtcagtcagcccctactgggagatgcctcccagttaggctacttgggggtcagggaccaacttgaagaggcagtctttccattctcagatctcaaactccgttatgggagatccactactctcttcaaagctgtcagacagggatgtttaagtctgcagaagtttctgctgccttttgttcagctatgccctgcccccagaggtgatgtctgcagaggtaggcaggcctccttgagctgcggtgggctccacccagttccagcttcctggctgccttgtttacctactcaagcctcagcaagggcgggcgcccctcccccagcctcgctgccaccttgcagttcggtctcagactgctgagctagcagtgagcaaagctccacgggcgtgggaccctccgagccaggcgtgggatatagtctcctggtgtgctctttgctcagttggaaatgcagaaatcacccgtcttctacgtcactcatgctgggagctgtagactggagctgttcctatttggccatcttggaacctcccACCTCAATTGTGC i gorGor5.CYUI01014964v1 I 53 C 0 s nomLeu3.chr4 139360143 4224 - 152096393 ttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctct----gtctgttattggaatataggaatgcttgtgaattttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacaatggggttttctaaatatacaattatgtcatctgcaaatggggacaatttgatttcctcttttcctaattgaataccctttatttctttctcctgcctgattgcactggccagaacttccaacactaagttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaaggaaatgctttcagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattgccttgagatacgtcccatcaatacctaatttattgagagtttttagcatgaagagctgttgaattttgtcaaaggccttttctgaatctattgaaataatcacatggtttttatctttggttctgtttatatgatggattacatttattgatttgcatatgttgaaccagccttgcattccagggatgaagcccagttgatc-------ataagcttttcgatgtgctgctggattctgtttgccagtattttattgaggatttttgcatcgatgttcatcagggatattggtctaaaattctctttttttgttgtgtctctgccaggcttttgtttcaggaagatgctggcctcataaaatgagttagggaggattacctatttttctattgattggaatattttcagaaggaatggtaccagcacctctttgtacctctggtagaattcagctgtgattctgtctggtcctggactttttttggttggtaggttcttaattattgcctcaatttcagagcctgttattagtctattcagggattcaacttcttcctggtttagtcttgggagagtgtatgtgtccaggaatttatccatttcttctagattttctagtttatttgtgtagaggtgttt-atagtattttctgatggtagtttgtatctctgtgggattgatggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttctttattagtcttgctaccagtctatcaattttgttgatctttttgaaaaaaccagcccctggattcattgattttttgaagggtttttt-gtgtctctatctccttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttctctagttcttttgattgtgatgttaaggtgtcaattttagatctttcgtcctttctcttgtgggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcattggtttcaaagaacatctttatttctgctttcatttcattatgtactgagtagtcattcaggagcaggttgttcaatttccatgtagttgagcagttttgagtgagtttcttaatcctgagttctagtttgattgcactgtggtctgagagacagtttgttataatttctgttcttttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataagtgtgtgatgtggtgctgagaagaatgtatattctgttgatttggggtagagagttctttagatgtctattaggtccacttggtgcagagctgagttcaattcctggatatgcttattaactttctgtctcgtggatctgtctaatgttgacagtgaggtattaaagtctcccattattattgtgtgggagtctaagtctcttcataggtctctaaggacttgctttatgaatctgggtgctcctgtattgggtgcatatatatttaggatagttagctcttcttgttgaattgatccctttaccattatgtaatggctttctttgtcccttctgatctttgttggtttaaagtctgttttatcagagactaggattgcaacccctgcttttttttgtttgtttgttttccattggcttggtagatcttcctccatccctttattttgagtctatgtgtgtctctgcatgtgagatgggtttcctgaatacagcgtactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatgttagctggttattttgctcattagttgatgcagtttcttcctagcatcgacggtctttacaatttggcatgtttttgaagtgtctggtaccagttgttcctttccatgtttagtgcttccttcaggag---tgtggtggaattcctggtggtgacaaaatctctcagcatttgcttgtctgtaaaggattttatttctccttcacttatgaaacttagtttggctgggtatgaaattctgggttgaaaattcttttctttaagaatgttgaatattggctcccactctcttctggcttgtagagtttctgctgagagatcagctgttagtctgatgggctttcctttgtgggtaacccaacctttctctctagctgcccttaacattttttccttcatttcaactttggtgaatctgacaattacatgtgttggggttgctcttctcaaggagtatctttgtggtgttctctgtatttcctgaatttgaatgttggcctgccttgctaggttggggaagttctccaggataacatcctgaagagtgttttccaacttggttccattctccccatcactttcaggtacaccaatcagacgtagatttggtcttttcacatagtcccatattttttggtggctttgttcatttctttttactcttttttctctaaatttctcttctcacttcatttcattcatttgatcttcaatcactgataccctttcttccagttgatcaaatcggctactgaagcttgtgcatgcatcacgttgttctcgtgccatggctttcagcttcatcatgtcatttaaggtcttctctacactggttattctagtcagccatttgtctaatcttttttcaaggtttttaacttctttgcaatgggttcgaacaccctcctttagctcggagaatattgttattaccgatcttctgaagccttcttctctcaaatcgtcaaagtcattctccgtccagctttgttctgttgctggcgaggagctgtgttcctttggaggagaagaggtgctctgatttttagaattttcagcttttctgctctggtttctccccatct--ttgtggttttatctacatttggtctttgatgatggtgacctacaaatggggttttggtgtggatgccctttctgtttgttagttttccttctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccgcttcagaccctgtttgcctgggtatcaccagcagaggctgcagaatcgcaaatattgcagaatggcaaatgtagctgcctgatcgttcctctggaagcttcgtctcagacgggcactcagccgtatgcagtgtcagtcggcccctactgggaggtgcctcccagttaggctactcaggggtcagggacccacttgaagaggcagtctttccgttctccgatctcaaactccatgctgggagatccactactctcttcaaagctgtcagacagggacacttaagtctgcagaagtttctgctgccttttgttcagctatgccctgcccccagaggtggagtctacagaggcaggcaggcctccttgagctgtggtgggctccacccagtttgagcttcctggctgctttgtttacctactcaagcctcagcaatgggaggcacccctcccccagccttgctgccaccttgcagttcgatctcagactgctgagctagcagtgagccaaactctgtgggtgtaggaccctccaagacaggcgtgggatataatctcctggtgtgctctttgctcatttggaaatgcggaaatcacctgtcttctggatcacttactctgggagctgtagactggagctgttcctattcagccatcttggaacctcccccCTCAATTGTGC i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e calJac3.chr13 105212690 3143 + 117903854 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e aotNan1.NW_018502140v1 3549953 2869 - 14941987 I e cebCap1.NW_016107689v1 1593149 2858 + 2203405 I e saiBol1.JH378121 19404023 2907 - 31320352 I e colAng1.NW_012115433v1 3436895 2753 + 6513552 I e manLeu1.NW_012106698v1 337125 2862 - 1517660 I e chlSab2.chr18 60003091 2856 - 72318688 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I e macNem1.NW_012016688v1 13556624 2821 - 18804593 I e macFas5.chr18 63003927 2840 - 75711847 I e rheMac8.chr18 57312512 2871 + 70235451 I a score=3600.000000 s hg38.chr18_GL383571v1_alt 27824 1 + 198278 C s panTro5.chr18 64983924 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106379 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5325494 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364367 1 - 152096393 C i nomLeu3.chr4 C 0 C 0 s calJac3.chr13 105215833 1 + 117903854 C i calJac3.chr13 I 3143 C 0 s saiBol1.JH378121 19406930 1 - 31320352 C i saiBol1.JH378121 I 2907 C 0 s cebCap1.NW_016107689v1 1596007 1 + 2203405 C i cebCap1.NW_016107689v1 I 2858 C 0 s aotNan1.NW_018502140v1 3552822 1 - 14941987 C i aotNan1.NW_018502140v1 I 2869 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e colAng1.NW_012115433v1 3436895 2753 + 6513552 I e manLeu1.NW_012106698v1 337125 2862 - 1517660 I e chlSab2.chr18 60003091 2856 - 72318688 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I e macNem1.NW_012016688v1 13556624 2821 - 18804593 I e macFas5.chr18 63003927 2840 - 75711847 I e rheMac8.chr18 57312512 2871 + 70235451 I a score=193816.000000 s hg38.chr18_GL383571v1_alt 27825 22 + 198278 CCTTCTTATAATATTCTTAGTT s panTro5.chr18 64983925 22 + 78221452 CCTTCTTATAATATTCTTAGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106380 22 + 77229886 CCTTCTTATAATATTCTTAGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5325495 22 + 17472758 CCTTCTTATAATATTCTTAGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364368 22 - 152096393 CCTTCTTATAATATTCTTAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57315383 22 + 70235451 CCTTCTTATAATATTCTCAGTT i rheMac8.chr18 I 2871 C 0 s macFas5.chr18 63006767 22 - 75711847 CCTTCTTATAATATTCTCAGTT i macFas5.chr18 I 2840 C 0 s macNem1.NW_012016688v1 13559445 22 - 18804593 CCTTCTTATAATATTCTCAGTT i macNem1.NW_012016688v1 I 2821 C 0 s chlSab2.chr18 60005947 22 - 72318688 CCTTCTTATAATATTCTCAGTT i chlSab2.chr18 I 2856 C 0 s manLeu1.NW_012106698v1 339987 22 - 1517660 CCTTCTTATAATATTCTCAGTT i manLeu1.NW_012106698v1 I 2862 C 0 s colAng1.NW_012115433v1 3439648 22 + 6513552 CCTTCTTATAATATTCTCAGTT i colAng1.NW_012115433v1 I 2753 C 0 s calJac3.chr13 105215834 22 + 117903854 CCTTCTTACAATAATCTTAGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19406931 22 - 31320352 CCTTCTTATAATAATCTTAGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596008 22 + 2203405 CCTTCTTATAATAATCTTAGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3552823 22 - 14941987 CCTTCTTATAATAACCTTAGTT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e cerAty1.NW_012001075v1 13173445 2837 + 18905526 I a score=1042449.000000 s hg38.chr18_GL383571v1_alt 27847 105 + 198278 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATCCTAAGATAAAATGTCCTGTCTCTAAACTTTACCAGAAGATGATTCAACAAATCTTTCAAATAGAAAA s panTro5.chr18 64983947 105 + 78221452 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATCCTAAGATAAAATGTCCTGTCTCTAAACTTTACCAGAAGATGATTCAACAAATCTTTCAAATAGAAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106402 105 + 77229886 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATCCTAAGATAAAATGTCCTGTCTCTAAACTTTACCAGAAGATGATTCAACAAATCTTTCAAATAGAAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5325517 105 + 17472758 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATCCTAAGATAAAATGTCCTGTCTCTAAACTTTACCAGAAGATGATTCAACAAATCTTTCAAATAGAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364390 105 - 152096393 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATCCTAAGATTAAATGTCCTGTCTCTAAACTTTACCAGAAGATGATTCAACAAATCTTTCAAATAGAAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57315405 105 + 70235451 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATACTAAGATTAAATTTCCTGTCTCTAAACTCTACCAGATGATGATTCAACAAATCTTGCAAATAGAAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63006789 105 - 75711847 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATACTAAGATTAAATTTCCTGTCTCTAAACTCTACCAGATGATGATTCAACAAATCTTGCAAATAGAAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13559467 105 - 18804593 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATACTAAGATTAAATTTCCTGTCTCTAAACTCTACCAGATGATGATTCAACAAATCTTGCAAATAGAAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13176282 105 + 18905526 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATACTAGGATTAAATTTCCTGTCTCTAAACTCTACCAGATGATGATTCAACAAATCTTGCAAACAGAAAA i cerAty1.NW_012001075v1 I 2837 C 0 s chlSab2.chr18 60005969 105 - 72318688 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATACTAAGATTAAATTTCCTGTCTCTAAACTCTACCAGATGATGATTCAACAAATCTTGCAAATAGAAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 340009 105 - 1517660 GTACTTACTTGTCTCACAGTTATTCAATGTTTGTTATACTAAGATTAAATTTCCTGTCTCTAAACTCTACCAGATGATGATTCAACAAATCTTGCAAATAGAAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3439670 105 + 6513552 GTACTTACTTGTCTCACAGTTATTCAATGTCTGTTATACTAAGATTAAATTTCCTGTCTCTAAACTCTACCAGACGATGATTCAACAAATCTTGCAAATAGAAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105215856 105 + 117903854 GTACTTGCTTGTCTCACAGTTATTTAATGTCTGTAATCCTAAGATAAAATGTCTTGTCTCTAGATTCTACCAGAAGACGATTCAACAAATTTTTCAAATAGAAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19406953 105 - 31320352 GTACTTACTTGTCTCACAGTTATTTAATGTCTGTAATCCTAAGATAAAATGTCTTGTCTCTAAACCCTACCAGAAGATGATTCAACAAATTTTTCAAATAGAAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596030 105 + 2203405 GTACTTACTTGTCTCACAGCTATTTAATTTCCGTAATCCTAAGATGAAATGTCTTGTCTCTAAACTCTACCAGAAGATGATTCAACAAATTTTTCAAATAGAAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3552845 105 - 14941987 GCACTCATTTGTCTCAGAGTTATTTAATGTCTGTAATCCTAAGATGAAATGTCTTGTCTCTAAACTCTACCAGAAGATGATACAACAAATTTTTCAAATAGAAAA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1215936 11259 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=821756.000000 s hg38.chr18_GL383571v1_alt 27952 80 + 198278 AACAAAGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAATTATTT-CTGCAGACAGAATCACATTTTCAATAA s panTro5.chr18 64984052 80 + 78221452 AACAAAGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAATTATTT-CTGCAGACAGACTCACATTTTCAATAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106507 80 + 77229886 AACAAAGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAATTATTT-CTGCAGACAGACTCACATTTTCAATAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5325622 80 + 17472758 AACAAAGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAATTATTT-CTGCAGACAGAATCACATTTTCAATAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364495 80 - 152096393 AACAAAGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAATTATTT-CTGCAGACAGAATCACATTTTCAATAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57315510 79 + 70235451 AACAAGGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i rheMac8.chr18 C 0 I 1077 s macFas5.chr18 63006894 79 - 75711847 AACAAGGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i macFas5.chr18 C 0 I 1077 s macNem1.NW_012016688v1 13559572 79 - 18804593 AACAAGGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATCA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i macNem1.NW_012016688v1 C 0 I 1071 s cerAty1.NW_012001075v1 13176387 79 + 18905526 AACAAGGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i cerAty1.NW_012001075v1 C 0 I 1066 s chlSab2.chr18 60006074 79 - 72318688 AACAAAGAGCATAAAATGCTGCTTATTAATGCTTAAGCTGAAAATAA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i chlSab2.chr18 C 0 I 1071 s manLeu1.NW_012106698v1 340114 79 - 1517660 AACAAGGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i manLeu1.NW_012106698v1 C 0 I 1079 s colAng1.NW_012115433v1 3439775 79 + 6513552 AACAAGGAGCATAAAATGCTGCTGATTAATGCTTAAGCTGAAAATAA-TATTT-CTGCAGACAGAATCACATCTTCAATAA i colAng1.NW_012115433v1 C 0 I 1074 s calJac3.chr13 105215961 80 + 117903854 AACAAAAAGCATAAAATGCTGCTGATTCATGCTTAAGCTGAACACAG-TATTTCCTGAAGACAGAACCACTTCTTCCATGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19407058 80 - 31320352 AACAAAGAGCATAAAATGCTGCTGATTCATGCTTAAGCTGAAAACAA-TATTTCCTGAAGACAGAACCACTTCTTCAATGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596135 80 + 2203405 AACAAAGAGCATAAAATGCTGCTGATTCATGCTTAAGCTGAAAACAA-TATTTCCTGAAGACTGTAACACTTCTTCAACGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3552950 80 - 14941987 AACAAAGAGCCTAAAATGCTGCTGATTCATGCTTAAGCTGAAAACAA-TATTTCCTGAAGACAGAACCACTTCTTCAACGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1227195 79 - 1406956 AACAAAGAGAATGACATGTTGCTGATTAATGTTCAAACTAAAAGTCA-TATTT-CTGCAAACAGAACTGCATCTTCAATGA i proCoq1.NW_012148742v1 I 11259 C 0 e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=1741748.000000 s hg38.chr18_GL383571v1_alt 28032 166 + 198278 GAATCA--CAAC---ATGAAGATCTGAACAAGTCTTGATGGGCTTCCTGTAGCATCAGCTGAGCGAGAATGGAAAGGAGAGTTCAACAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG s panTro5.chr18 64984132 166 + 78221452 GAATCA--CAAC---ATGAAGATCTGAACGAGTCTTGATGGGTTTCCTGTACCATCAGCTGAGTGAGAATGGAAAGGAGAGTTCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGGCTGATGTTGTTCCAAAGCCAGCAGAACTGGTATTAAACTGATCTATCAGTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106587 166 + 77229886 GAATCA--CAAC---ATGAAGATCTGAACGAGTCTTGATGGGTTTCCTGTACCATCAGCTGAGTGAGAATGGAAAGGAGAGTTCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGGCTGATATTGTTCCAAAGCCAGCAGAACTGGTATTAAACTGATCTATCAGTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5325702 166 + 17472758 GAATCA--CAAC---ATGAAGATCTGAACAAGTCTTGATGGGCTTCCTGTAGCATCAGCTGAGCGAGAACAGAAAGGAGAGTTCAATAGTTTTTGAAACTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364575 166 - 152096393 GAATCA--CAAC---ATGAAGATCTGAACGAGCCTTGATGGGCTTCCTGTAGCATCAGCTGAGCGAGAACGAAAAGGAGGGCACAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGATTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57316666 166 + 70235451 GAATCA--CAAC---ATGAAGATCTGAATGAGCCTTGATGGGCTTCCGGCAGCATCAGCTGAGCGAGAACCAAAAGGAGGGCGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i rheMac8.chr18 I 1077 C 0 s macFas5.chr18 63008050 166 - 75711847 GAATCA--CAAC---ATGAAGATCTGAATGAGCCTTGATGGGCTTCCGGCAGCATCAGCTGAGCGAGAACCAAAAGGAGGGCGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i macFas5.chr18 I 1077 C 0 s macNem1.NW_012016688v1 13560722 166 - 18804593 GAATCA--CAAC---ACGAAGATCTGAATGAGCCTTGATGGGCTTCCGGCAGCATCAGCTGAGCGAGAACCAAAAGGAGGGCGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTTCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i macNem1.NW_012016688v1 I 1071 C 0 s cerAty1.NW_012001075v1 13177532 166 + 18905526 GAATCA--CAAC---ATGAAGATCTGAACGAGCCTTGATAGGCTTCCGGCAGCATCAGCTGAGCGAGAACCAAAAGGAGGGCGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i cerAty1.NW_012001075v1 I 1066 C 0 s chlSab2.chr18 60007224 166 - 72318688 gaaTCA--CAAC---ATGAAGATCTGAACGAGCCTTGATGGGCTTCCGGCAGCATCAGCTGAGCGAGAACCAAAAGGAGGATGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i chlSab2.chr18 I 1071 C 0 s manLeu1.NW_012106698v1 341272 166 - 1517660 GAATCA--CAAC---ATGAAGATCTGAACGAGCCTTGATGGGCTTCCGGCAGCATCAGCTGAGCAAGAACCAAAAGGAGGGTGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i manLeu1.NW_012106698v1 I 1079 C 0 s colAng1.NW_012115433v1 3440928 166 + 6513552 GAATCA--CAAC---ATGAAGATCTGAACAAGCGTTGATGGGCTTCCGGCAGCATCAGCTGAGTGAGAACCAAAAGGAGGGCGCAATAGTTTTTGAAATTTCACACATTCTAGGA-AAGACTGACATTGTTCCAAAGCCAACAGAACTGGTATTAAACTGATCTATCAGTTG i colAng1.NW_012115433v1 I 1074 C 0 s calJac3.chr13 105216041 166 + 117903854 GAACCA--CAAC---ATGAAGATCTGAACAAGCCATGATGGGCTTGCTGAAGCATCAGCTGAAGGAGTGCCAAAAGAAAGGCACAATAGTTTTTGGAAGTTCACATATTCTAGGA-AAAACTGATATTGTTCCAAAGCCAACAGAACTGGTATTAAAGTGATCTATTAGTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19407138 166 - 31320352 GAACCA--CAAC---ATGAAGATCTGAACAAGCCGTGATGAACTTTCTGAAGCATCAGCTGAAGGAGGTCCAAAAGAAAGGCACAATAGTTTTTGGAAGTTCACATATTCTAGAA-AAGACTGATATTGTTCCAAAGCCAACAGAACTAGTATTAAAGTGATCTATCCGTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596215 168 + 2203405 GAACCAGTAAAC---ATGAAGATGTGAACAAGCCCTGATGagctttctgaaccatcagctgaaggaggtccaaaagaaaggctcaatagtttttggaagttcacatattctaGGA-AAGACAGATACTGTTCCAAAGCCGACAGAACTGGTATTAAAGTGATCTATCAGTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3553030 166 - 14941987 GACCCA--CAAC---ATGAAGATCTGAACAAGCCGTGATGGGCTTTCTGAAGCATCAGCTGAAGGAGTACCAAAAGAAAGGCACAATAGTTTTTGGGAGTTCACATATTCTAGGA-AAGACTGATATCGTTCCAAAGCCAACAGAACTGGTATTAAAGTGATCTATCAGTTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1227274 168 - 1406956 GAATCA--CAACATGATGACGATCTGAACAACCCTTGCTGGTCTTTCTGCAGCATTGGCTGAACAAGGACCAAAAAGACAGCACAAGAATTTTTGAAAGTTCACACATTCTAGGATGAAACTGA--TTGTTCTAAAGCCAGCAGAATTTGTTTTAAACTGATCTGTCAATTG i proCoq1.NW_012148742v1 C 0 I 148 e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=1493771.000000 s hg38.chr18_GL383571v1_alt 28198 151 + 198278 AAACCAAACTAAAACAAACAAAATCTCTCCTTAATAAACATGATCTCTATTGCAAGTTAACCAGTGAGCAATAGTCCTTTCCTTCTGAAAGCCACCCAGGCAAGAAGGGATTCACTCCAAGAAACATATTTCAGAATATCAAACATTAAAT s panTro5.chr18 64984298 151 + 78221452 AAACCAAACTAAAACAAACAAAATCTCTCCTTAGTAAACATGATCTCTATTGCAAGTTAACCAATAAGCAATAGTCCTTTCCTTCTGAAAGCCACCCAGGCGAGAAGGGATTCACTCCAAGAAACATATTTCAGAATACCAAACATTAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106753 151 + 77229886 AAACCAAACTAAAACAAACAAAATCTCTCCTTAGTAAACATGATCTCTATTGCAAGTTAACCAGTAAGCAATAGTCCTTTCCTTCTGAAAGCCACCCAGGCGAGAAGGGATTCACTCCAAGAAACATATTTCAGAATACCAAACATTAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5325868 151 + 17472758 AAACCAAACTAAAACAAACAAAATCTCTCCTTAATAAACATGATCTCTATTGCAAGTTAACCAGTGAGCAATAGCCTTTTCCTTTTGAAAGCCACCCAGGCGAGAAGGGATTCACTCCAAGAAACATATTTCAGAATACCAAACATTAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364741 151 - 152096393 AAACCAAACTAAAACAAACAAAACCTCTCCTTAGTAAACATGATCTCTATTGCAAGCTAACAAGTGAGCAATAGTCCTTTCCTTCTAAAAGCCACCCAGGTGAGAAGGGATTCACTCCAAGAAACATATTTCAGAATACCAAACATTAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57316832 151 + 70235451 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCCACCCAGGCAGGAATGGACTCACTCCAATAAACATATTTCAGAATACCAAACATTAAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63008216 151 - 75711847 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCCACCCAGGCAGGAATGGACTCACTCCAATAAACATATTTCAGAATACCAAACATTAAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13560888 151 - 18804593 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCCACCCAGGCAGGAATGGACTCACTCCAATAAACATATTTCAGAATACCAAACATTAAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13177698 151 + 18905526 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCTACCCAGGCAGGAAGGGACTCACTCCAATAAACATATTTCAGAATACCAAACATTAAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60007390 151 - 72318688 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCCACCCAGGCAGGAATGGACTCACTCCAATAAACAAATTTCAGAATACCAAACATTAAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 341438 151 - 1517660 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCCACCTAGGCAGGAAGGGACTCACTCCAATAAACATATTTCAGAATACCAAACATTAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3441094 151 + 6513552 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATAATCTCTATTGCAAGCTAACCAGTGAGCAATAGTCTTTTCCTTCTGAAAGCCACCCAGGCAGGAAGGGACTCACTCCAATAAACATATTTCAGAATACCAAACATTAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105216207 148 + 117903854 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTGAACAT---TTCTACTGCAAGCTAGCCAGTCAGCAACAGTCCTTTCCTTCTGAAAGCCAGCCAGGCAGGAAGGGATTCACTCCAATAAACACATTTCAGAATATCAAACATTGAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19407304 151 - 31320352 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATTACTTCTACTGCAAGCTAGCCAGTCAGCAATAGTCCTTTCCTTCTGAAAGCCAGCCAGGTAGGAAGGGATTCACTCCAATAAAGACATTTCAGAATATCAAACATTAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596383 151 + 2203405 AGACCAAACCAAAACAAACAAAATATCTCCTTAGTAAACATTATTTATACTGCAAGCTAGCCAGTCAGCAACAGTCCTTTCCTTTTGAAAGCCAGCCAGGCAGGAAGGGATTCACTCCAATAAAGACATTTCAGAATATCAAACATTAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3553196 151 - 14941987 AAACCAAACCAAAACAAACAAAATCTCTCCTTAGTAAACATTGTTTCTACTGCAAGCTAGCCAGTCAGCAACATTCCTTTCCTTCTGAAAGCCAGCCAGGCAGGAAGGGATTCACTCCAATAAACACATTTCAGAATATCAAACATTAAAC i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1227442 148 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=302268.000000 s hg38.chr18_GL383571v1_alt 28349 28 + 198278 AGTCTCACATGAGTAATAATGCTTCTAC s panTro5.chr18 64984449 28 + 78221452 AGTCTCACATGAGTAATAATGCTTCTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106904 28 + 77229886 AGTCTCACATGAGTAATAATGCTTCTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5326019 28 + 17472758 AGTCTCACATGAGTAATAATGCTTCTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364892 28 - 152096393 AGTCTCACATGAGTAATAATGCTTCTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57316983 28 + 70235451 AGTCTCACATGAGTAATAACGCTTCTAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63008367 28 - 75711847 AGTCTCACATGAGTAATAACGCTTCTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13561039 28 - 18804593 AGTCTCACATGAGTAATAACGCTTCTAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13177849 28 + 18905526 AGTCTCACATGAGTAATAACGCTTCTAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60007541 28 - 72318688 AGTCTCACATGAGTAATAACGCTTCTAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 341589 28 - 1517660 AGTCTCACATGAGTAATAACGCTTCTAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3441245 28 + 6513552 AGTCTCACATGAGTAATAACACTTCTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105216355 28 + 117903854 AGACTCACGTGAGTAATAATGATTCTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19407455 28 - 31320352 AGACTCACATGAGTAATAATGATTCTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596534 28 + 2203405 AGACTCACATGAGTAATAATGATTCTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3553347 24 - 14941987 AGACTCA----AGTAATAATGATTCTAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1227590 28 - 1406956 AGTCTCACATGAGTAATGATGCTTCTAC i proCoq1.NW_012148742v1 I 148 I 155 e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=3115611.000000 s hg38.chr18_GL383571v1_alt 28377 340 + 198278 CCAGTTGAAGATACACCAATCTTCACCCCCATACTTCCTCTAAACCCATATAAGGTCATCAGTCCCTTCTATTAAGAGAGACTGTGCCTGATAAGCATAGTTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCCTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTAGTACCAGTATGAATTCTAGGTTTCTG--GTTTCGGCAAGCCCATGAACAAATAGTTAGTGTGACATATTTTTCCAGTTTTCTTAAAAGAGTCCTGACTT-ACATGTGGGCAT-CCCACGCAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTATGGATA s panTro5.chr18 64984477 387 + 78221452 CCAGTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCATATAAGGTCATCAGTCCCTTCTATTAAGAGAGACTGTACCTGATCAGCATAGTTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCCTTCTGTTTCCTCATTTCAGATATTCAGTGACAAGCAGAAATTGTGCCTTCTGTTTCCTCATTTCAGATATTCAGTGACAATCTTATTACCCTTTGGTACCAGTATGAATCCTAGGTTTCTG--GTTTCGGCAAGCCCATGAACAAATAGTTAGTGTGACATGTTTTTCCAGTTTTCTTAAAAGAGTCCTGACTT-ACATGTGGGCAT-CACACGCAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTATGGATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64106932 340 + 77229886 CCAGTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCATATAAGGTCATCAGTCCCTTCTATTAAGAGAGACTGTACCTGATCAGCATAGTTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCCTTCTGTTTCCTCATTTCAGATATTCAGTGACAA-----------------------------------------------TCTTATTACCCTTTGGTACCAGTATGAATCCTAGGTTTCTG--GTTTCGGCAAGCCCATGAACAAATAGTTAGTGTGACATGTTTTTCCAGTTTTCTTAAAAGAGTCCTGACTT-ACATGTGGGCAT-CACATGCAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTATGGATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5326047 340 + 17472758 CCAGTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCATATAAGGTCATCAGTCCCTTCTGTTAAGAGAGACTGTGCCTGATCAGCATAGTTTCTCATTGCTAGAGCAAGCAG-AAATTGTGCCTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTAGTACCAGGATGAATCCTAGGTTTCTG--GTTTCGGCAAGCCCATGAACAAATAGTTAGTGCGACATGTTTTTCCAGTTCTCTTAAAAGAGTCCTGACTT-ACATGTGGGCAT-CCCACGCAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTATGGATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139364920 340 - 152096393 CCATTTGAAGATACACCAATCTTCACCCCCATACTTCCTCTAAACCCATATAAGGTCATCAGTCCCTTCCATCAAGAGAAACTGTGCCTAATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCCTTCTGTTTCATCATTTCACATATTCAGTGATGA-----------------------------------------------TCTTATTATCCTTTGGTACCAGTATGAATCCTAGGTTTCTG--GTTTTGGCAAGCCTATGAACAAACAGTTAGTGTGACACATTTTTCCAGTTTTCTTAAAAGAGTCCTGACTT-ACATGTGGGCAT-CCCATGCAGCTAACCCCTCCATTAACTTCAAAAGTCTTACAGTATGGATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57317011 338 + 70235451 TCATTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTAAAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCTTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTGGTACCAGTATGAATCCTCGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----TAGTGTGACACATTTTTCCAATTTTCTTAAAAGAGTCCTAAGTT-ACATGTGGGCAT-CCCACACAGTTAACCCCTCCCTTAACTTCAAAAGTCTTACAGTTTGGATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63008395 338 - 75711847 TCATTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTATAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCTTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTGGTACCAGTATGAATCCTAGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----TAGTGTGACACATTTTTCCAATTTTCTTAAAAGAGTCCTAAGTT-ACATGTGGGCAT-CCCACACAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTTTGGATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13561067 338 - 18804593 TCATTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTATAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCTTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTGGTACCAGTATGAATCCTAGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----TAGTGTGACACATTTTTCCAATTTTCTTAAAAGAGTCCTAAGTT-ACATGTGGGCAT-CCCACACAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTTTGGATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13177877 337 + 18905526 TCATTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTATAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCTTTCTGTTTCCTCATTTCAGATATTCAGTGATAA-----------------------------------------------TCTTATTATCTTTTGGTACCAGTATGAATCCTAGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----TAGTGTG-CACATTTTTCCAGTTTTCTTAAAAGAGTCCTAAGTT-ACATGTGGGCAT-CCCACACAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTTTGGATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60007569 338 - 72318688 TCATTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTATAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCTTTATGTTTCCTCATTTCAGATATTCAGTGATAA-----------------------------------------------TCTTATTATCCTTTGGTACCAGTATAAATCCTAGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----TAGTATGACACATTTTTCCAGTTTTCTTAAAAGAGTCCTAAGTT-ACATGTGGGCAT-CCCACACAGTTAACCCCTCCATTAACTTCAAAAGTCTTACAGTTTGGATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 341617 337 - 1517660 TCATTTGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTATAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCTAGAGCAAGCAG-AAATTGTGCTTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTGGTACCAGTATGAATCCTAGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----TAGTGTGACACA-TTTTCCAATTTTCTTAAAAGAGTCCTAACTT-ACATGTGGGCAT-CCCACACAGTTAACCCCTCCATTAACTTCAAAAGTCTTACCGTTTGGATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3441273 338 + 6513552 TCATTCGAAGATACACCAGTCTTCACCCCCATACTTCCTCTAAACCCTTATAAGGTCATCAGTCCCTTCTATCAAGAGAGACTCTGCCTGATCAGCATAGCTTCTCATTTCCAGAGCAAGCAG-AAATTGTGCTTTCTGTTTCCTCATTTCAGATATTCAGTGACGA-----------------------------------------------TCTTATTATCCTTTGGCACCAGTATGAATCCTAGGTTTCTGAAACCATGGCAAGTCCATGAACAAA----tagtgtgacacatttttccagttttcttaaaagagtcctaattt-acatgtgggcat-cccacacagttaacgcctccattaacttcaaaagtcttacagtttggata i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105216383 331 + 117903854 CCATTTGAAGATACATCAGTCTTCACCCTCATACTTCCTCTATATGCATATAGAGTCATCAGTGCCTTCCATCAAAAGAGACTGTGCCTGACCAGCATTGCTTCCCATTTCTAGAAAGGGCAGAAAATTGTGCCTTCTGTTTCCTCATTTCAGATGTTCAGTGGCAA-----------------------------------------------TCTTATTTTCCT-----ACCAGTATGAATCCTAGGCTTCTG--GTTTCGGCAAGCCCATGAACAA-----TAGTGTGACACGTTCTTTCAGTTTTCTTAAAAGAGTCCTAACTT-ACATGTGGGCATCCCCACACAG-TAACCCCTCCGTTAACTTCATAAGTCTTACAGTTTGGATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19407483 332 - 31320352 TCATTTGAAGATACATCGGTCTTTACCTTCATACTTCCTTTATACTCATATAAAGTCATTAGTGCCTTCCATTAAGAGAGACTGTGCCTGACCAGCATTGCTTCCCATTTCTAGAAAAGGCATAAAATTGTGCCTTCTGTTTCCTCATTTCAGATGTTCAGTGACAA-----------------------------------------------TCTTATTATCCT-----ACCAGTATGAATCCTAGGCTTCTG--GTTTCAGCAAGCCCATGAGCAA-----CAGTGTAACACGTTCTTCCAGTTTTCTTAGAAGAGTCCTAACTT-ACATGTGGGCATCCCCATGCAGTTAACCCCTCCATTAACTTCATAAGTCTTACAGTTTGGATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596562 333 + 2203405 CCATTTGAAGATAAATCAGTCTTCGCTCTCATACTTCCTCTATACTCATATAAAGTCATCAGTGCCTTCCATTAAGAGAGGCTGTGCCTGACCAGCAGTGCTTCCCATTTCTAGAAAAGGCAGAAAACTGTGCCTTCTGTTTCCTCATTTCAGATGTTCAGTGGCAA-----------------------------------------------TCTTATTATCCT-----ACCAGTATGAACCCTAGGCTTCTG--GTTTCGGCAAGCCCTTGAACAA-----CAGTGTGACACGTTCTTCCAGTTTTCTTAAAAGAGTCCTAACTTAACATGTGGGCATCCCCACACAGTTAACTCCTCCGTTAACTTCATAAGTCTTACAGTTTGGATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3553371 332 - 14941987 CCATTTGAAGATACATCAGTCTTCACCCTCATACTTCCTCTATACCCACATAAAGTCATCAGTGCCTTCCATTAAGAGAGACTGTGACTGACCAGCATTGCTTCTCATTTCTAGAAAAGGCAGAAAATTGTGCTTTCTGTTTCCTCATTTCAGATGTTCAGTGGCAA-----------------------------------------------TCTTATTATCCT-----ACCAGTATGAATCCTAGGCTTCTG--GTTTCGGCAAGCCCATGAACAA-----TAGTGTGACATGTTCTTCCAGTTTTCTTAAAAGAGTCCTAACTT-ACATGTGGGTATCCCCACGCAGTTACCCCCTCCGTTAACTTCATAAGTCTTACAGTTTGGATA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1227618 155 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=9834338.000000 s hg38.chr18_GL383571v1_alt 28717 900 + 198278 ATAAGTTATGCATTCATTCAAATATCGTAGCATTCATAGAGATAATAAAATGATGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAAAATTTTCAGTAAGATGGCTTATCATCACAATTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAAAGATGAGAGAAGAACTAAGATGA---GTAGGAATTATTATCATTGAAGGAAAAATAACTCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGAAAACAATGTCATCAAAGTCATAGGAAGAGAGTCATTTAAGGGTCGATGCATGTTCAGCATTTGGTGCGTATTGCAGACCTAACAGGTAAAGTTCTCAGAA-TATCTACACTGATGATTTTAGGAAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAATTATTGTGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGATATCATGAATATAAATAGTGCTTTTCAAAAGAGTGGCTTTGAGAAGATAGGGAAGAGATTACACACTAGTTGAAGAAATGGGCTTAGTTTTATTTTCCACTTTGAAAATATGGatgaatgagctgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatactgtgtgatctcacttagatgtggaatctaacaatgctgaactcacagaagtagagaatagagtagtggctactaggggctgaaagaagggggagttgaggagatatccctcaaaggatacaagatttctgctagataggaggaataagctcaaggggtctattgtacaatatggtcactatagttaataataatgtat-----tctcgaaaattgctaaaatagtag s panTro5.chr18 64984864 902 + 78221452 ATAAGTTATGCATTCATTCGAATATGGTAGCATCCACAGAGATAATAAAATGACAACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAAAATTTTCAGTAAGATGGCTTATCATCACAATTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAAAGATGAGAGAAGAACTAAGATGAAGAGTAGGAATTATTATCATTGAAGGAAAAATAACTCAAGAAGAGCACCCAGAAGTGTAACGGAAAAATCAGAAGAAAACAATGTCATCAAAGTCATAGGAAGAGAGTCATTTAAGGGTCGATGCATGTTCAGCATTTGGTGCGTATTGCAGACCTAACAGGTAAAGTTCTCAGAA-TATCTACACGGATGATTTTAGGAAGAATAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAATTATTGTGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAGTGGCTTTGAAAAGATAGGGAAGAGATTAGACACTAGTTGAAGAAATGGGCTTTGTTTTATTTTCCACTT-GAAAATATGGatgaatgagctgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatactgcgtgatctcacttagatgtggaatctaacaacgctgaactcacagaagtagagaatagagtggtggctactaggggctgaaagaagggggagttgaggagatatccctcaaaggatacaagatttctgctagataggaggaataagctcaagaagtctattgtacaatatggtcactatagttaataacaatgtat-----tctcgaaaattgctaaaatagtag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64107272 902 + 77229886 ATAAGTTATGCATTCATTCGAATATGGTAGCATCCACAGAGATAATAAAATGACAACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAAAATTTTCAGTAAGATGGCTTATCATCACAATTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAAAGATGAGAGAAGAACTAAGATGAAGAGTAGGAATTATTATCATTGAAGGAAAAATAACTCAAGAAGAGCACCCAGAAGTGTAACGGAAAAATCAGAAGAAAACAATGTCATCAAAGTCATAGGAAGAGAGTCATTTAAGGGTCGATGCATGTTCAGCATTTGGTGCGTATTGCAGACCTAACAGGTAAAGTTCTCAGAA-TATCTACACGGATGATTTTAGGAAGAATAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAATTATTGTGCAGTGATGCGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAGAGAGTGGCTTTGAAAAGATAGGGAAGAGATTAGACACTAGTTGAAGAAATGGGCTTTGTTTTATTTTCCACTT-GAAAATATGGatgaatgagctgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatactgcgtgatctcacttagatgtggaatctaacaacgctgaactcacagaagtagagaatagagtggtggctactaggggctgaaagaagggggagttgaggagatatccctcaaaggatacaagatttctgctagataggaggaataagctcaagaagtctattgtacaatatggtcactatagttaataacaatgtat-----tctcgaaaattgctaaaatagtag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5326387 893 + 17472758 ATAAGTTATGCATTCATTCGAATACGGTAGCATTCATAGAGATAATAAAATGATAACATTCTTTTTTGGATATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAACATTTTCAGTAAGATGGCTTATCATCACAATTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCA-ATAAAAAGAAGAGACTGAAAGATGAGAGAAGAACTAagatga---gtaggaattattatcattgaaggaaaaataactcaagaagagcacccagaagtgtaactgaaaaatcagaagaaaacaatgtcatcaaagtcataggaagagagtcatttaagggtcgatgcatgttcagcatttggtgcgtattgcagacctaacaggtaaagttctcagaa-tatctacactgatgattttaggaagaacaatttcagtggagtaattaatgaagaaacaactcaaattattgtgcagtgatgtgtcaaaagaactatgaaaaaatagacatcatgaatataaatagtgcttttcaaaagagtggctttgaaaagatagggaagagattagacactagttgaagaaatgggcttaGTTTTATTTTCCACTTTGAAAATATGGatgaatgagctgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatactgcgtgatctcacttagatgtggaatctaacaacgctgaactcacagaagtagagaatagagtggtggctactaggggctgaaagaagggggagttgaggagatatccctcaaaggatacaagatttctgctagataggaggaataagctcaagaggtctattttacaatatggtcactatagtt------aatgtat-----tcttgaaaattgctaaaatagtag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139365260 894 - 152096393 ATAAGTTATACATTCATTCAAATATGGTAGCAT---------TAATAAAATGACGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAAAATTTTCAGTAAGATGGCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCGGGAG-TAATGGGGATCATATAAAAAAAAGAGCCTGAAAGATGAGAGAAGAACTAAGATGTAGAGTAGGAATTATTATCATTGAaggaaaaatgactccagaagagcacccagaagtgtaattgaaaaatcataagaaaacaatgtcatcaaagtcataggaagagagtcatttaagggtgaatgcatgttcagcatttggtgcatattgcagacctaacaggtaacgttctcagaa-tatctacactgatgattttaggaagaacaatttcagtggagtaattaatgaagaaacaactcaaattattgtgcagtgatgtgtcaaaagaactgtgaaaaaatagacatcatgaatataaatagtgcttttcaaaagagtggctttgaaaagatagagaagagattagacactagttgaagaaatgggcttaGTTTTATCTTCCACTTTgaaaacatggatgaatgagccgggaggacattacgttcagtgaaataagttaggcacagaaagacaaataccgcatgatctcacttagatgtggaatctaacaacgctgaactcacagaagtagagaatagagtggtggttactaggggctgaaagaagggagagttgaggagatacccctcaaaggatacaagatttctgctagataggaggaataagctcaagagatctattgtacaacatggtcactatagttaataacaatgtat-----tctcgaaaattgctaaaatagtag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57317349 904 + 70235451 ATAAGTTATACATTCATTCAAATACGGTAGCATTCATGGAGATAATAAAATGATGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGAAAAAATTTTCAGTAAGTCGGCTTATCATCACAAATATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAGAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAaaaataaatcaagaagagcacccagaagtgtaactgaaaaatcagaagaaaacaatgtcatcaaagtcataagaagagagtcatttaagggtcgatgcattttcagcatttggtgtgtactgcagacctaacaggtaaagttctcagaattatctacactgatgattttagggagaacagtttcagtggagtaattaatgaagaaacaactcaactgactgagcagtgatgtgtcaaaagaactatgaaaaaatagacatcatgaatataaatagtgcttttcaaaagaatggctttgaaaagataaggaagagattagacactagttgaagaaatggtcttagttttatcttccatttcgaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatagcacgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactaggggctgaaagaagggagagttgaggagatatccatcaaagggtataagatttcagctagataggaggaataagctcaagagatctgttgtccaacatggtcactatagttaataacaatgtat-----actcaaaatttgctaaaatagtag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63008733 904 - 75711847 ATAAGTTATACATTCATTCAAATACGGTAGCATTCATGGAGATAATAAAATGATGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGAAAAAATTTTCAGTAAGTCGGCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAGAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAAAAATAAATCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGAAAACAATGTCATCAAAGTCATAAGAAGAGAGTCATTTAAGGGTCGATGCATTTTCAGCATTTGGTGTGTACTGCAGACCTAACAGGTAAAGTTCTCAGAATTATCTACACTGATGATTTTAGGGAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAACTGACTGAGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAATGGCTTTGAAAAGATAAGGAAGAGATTAGACACTAGTTGAAGAAATGGTCTTAGTTTTATCTTCcatttcgaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatagcacgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactaggggctgaaagaagggagagttgaggagatatccatcaaagggtataagatttcagctagataggaggaataagctcaagagatctgttgtccaacatggtcactatagttaataacaatgtat-----actcaaaatttgctaaaatagtag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13561405 904 - 18804593 ATAAGTTATACATTCATTCAAATACGGTAGCATTCATGGAGATAATAAAATGATGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGAAAAAATTTTCAGTAAGTCGGCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAGAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAaaaataaatcaagaagagcacccagaagtgtaactgaaaaatcagaagaaaacaatgtcatcaaagtcataagaagagagtcatttaagggtcgatgcattttcagcatttggtgtgtactgcagacctaacaggtaaagttctcagaattatctacactgatgattttagggagaacaatttcagtggagtaattaatgaagaaacagctcaactgactgagcagtgatgtgtcaaaagaactatgaaaaaatagacatcatgaatataaatagtgcttttcaaaagaatggctttgaaaagataaggaagagattagacactagttgaagaaatggtcttagttttatcttccatttcgaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatagcacgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactaggggctgaaagaagggagagttgaggagatatccatcaaagggtataagatttcagcgagataggaggaataagttcaagagatctgttgtccaacatggtcactatagttaataacaatgtat-----actcaaaatttgctaaaatagtag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13178214 904 + 18905526 ATAAGTTATACATTCATTCAAATACGGTAGCATTCATGGAGATAATAAAATGACGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGAAAAAATTTTCAGTAAGTCGGCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAAAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAAAAATAAATCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGAAAACAATGTCATCAAAGTCATAAGAAGAGAGTCATTTAAGGGTCGATGCATTTTCAGCATTTGGTGTGTATTGCAGACCTAACAGGTAAAGTTCTCAGAATTATCTACACTGATGATTTTAGGGAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAACTGACTGAGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAATGGCTTTGAAAAGATAGGGAAGAGATTAGACACTAGTTGAAGAAATGGTCTTAGTTTTATCTTCcatttcaaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaataccacgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactaggggctgaaagaaggaagagttgaggagatatccatcaaagggtataagatttcagctagataggaggaataagctcaagagatctgttgtccaacatggtcactatagttaataacaatgtat-----actcaaaatttgctaaaatagtag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60007907 904 - 72318688 ATAAGTTATACATTCATTCAAATATGGTAGCATTCATGGAGGTAATAAAATGACGACATTCTTTTTTGGACATTTTGTATTGAAAGTCTTTGTGAAACAGCCAAGAAAAAATTTTCAGTATGTCGGCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAG-AAATGGGGATCATATAAAAAGAAGAGACTGAGAGATGAGAGAAGAACTAAGATGAAGAGCAGGCATTATTATCATTGAAGGAAAAATAAATCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGAAAACTATGTCATCAAAGTCATAAGAAGAGAGTCACTTAAGGGTCGATGCATTTTAAGCATTTGGTGTGTATTGCAGACCTAACAGGTAAAGTTCTCAGAATTATCTACACTGATGATTTTAGGGAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAATGACTGAGCAATGATGTGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAATGGCTTTGAAAAGATAGGGAAGAGATTAGACACTAGTTGAAGAAATGGTCTTAGTTTTATCTTCcatttcgaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaatagcacgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactaggggctgaaagaagggagagttgaggagatatccatcaaagggtataagatttcagctagataggaggaataagctcaagagatctgttgtccaacatggtcactatagttaataacaatgtat-----actcaaaatttgctaaaatggtag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 341954 904 - 1517660 ATAAGTTATACATTCATTCAAATATGGTAGCATTCATGGAGATAATAAAATGATGACATTCTTTTTTGGACATTTTGTAATGAAAGTCTTTGTGAAACAGCCAAGAAAAAATTTTCAGTAAGTCAGCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGAAAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAAAAATAAATCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGAAAACAATGTCATCAAAGTCATAAGAAGAGAGTCATTTAAGGGTCGATGCATTTTCAGCATTTGGTGTGTATTGCAGACCTAACAGGTAAAGTTCTCAGAATTATCTACACTGATGATTTTAGGGAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAACTGACTGAGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAATGGCTTTGAAAAGATAAGGAAGAGATTAGACACTAGTTGAAGAAATGGTCTTAGTTTTATCTTCcatttcgaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaataccacgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactaggggctgaaagaagggagagttgaggagatatccatcaaagggtataagatttcagctagataggaggaataagctcaagagatctattgtacaacatggtcactatagttaataacaatgtat-----agtcaaaatctgctaaaatagtag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3441611 904 + 6513552 ataagttatacattcattcAAATATGGTAGCATTCATGGAGATAATAAAATGACGACATTCTTTTTTGGACATTTTGTATTGGAAGTCTTTGTGAAACAGCCAAGAAAAAATTGTCAGTAAGTTGGCTTATCATCACAACTACATGGTGAATAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGCAGAGACTGAGAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAAAAATAAATCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGCAAACAATGTCATCAAAGTCATAAGAAGAGACTCATTTAAGGGTCGATGCATTTTCAGCATTTGGTGTGTATTGCAGACCTAACAGGTAAAGTTCTCAGAATTATCTACACTGACGATTTTAGGGAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAACGACTGAGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGACATCGTGAATATAAATAGTGCTTTTCAAAAGAATGGCTTTGAAAAGATAGGGAAGAGATTAGACACTAGTTGAAGAAATGGTCTTAGTTTTATCTTCcatttcgaaaacatggatgaatgagccgggaggacattatgttcagtgaaataagtcaggcacagaaagacaaataccacgcgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagagtggtggttactagaggctgaaagaagggagagttgaggagatatccatcaaagggtacaagatttcagctagataggaggaataagctcaagagatctattgtacaacatggtcactatagttaataacaatgtat-----actcaaaatttgctaaaatagtag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105216714 905 + 117903854 ATAAGTTATACATTCATTCAAATATGGTAGCATTCATGGAGATAATaaaatgatgatgttcttttttggacatattgtattgaacatctttgtgaaacagccaagtaaaaattttcagtaagttgtCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAC-TAATGGGGATCATATAAAAAGAAGAGACTGTAAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAAAAAGAAATCAAAAAGAGCACCCAGAAGTGTAATTGAAAAATCAGAAGAAAACAAAGTTATAAAAGACATAAGAAGAGAGGTA-TTAAGGGTCGATGCACGTTCAGCATTTGGTGCATATTGCAGACCTGAAAGGTAAAATTCTCAGAG-TATCTACACTGATGACTTTAAGAAGAACGATTTCAGTGGAGTAATTAACGAAGAAACAACTCAAATAACCATGCAGCGATGTGTCAAAAGAACTA-CAAAAGATAGACATCATGAATATAAATAGTGCTTTTCAAAAGACTGGCTTTGAAAAGATAGGAAAGAGATTAGATACCAGTTAAATAAATTGGCTTAGCTTTATATTCCACTTTGAAAATGTGAatgaatgagccgggaggacattatgctcagtgaaataagtcaggcacagaaagacaaatactgcgtgatctcactcagatgtggaatctaacagtgttgaactcatagaagtggagaatagaatggtggttactaggggctgaaagaagggagagttggcgagatatccagcaaaggatataagatttc-gctagataagaggaataagcttaagagctctattgcacaagatggtaactatagttaataacaatgtattgcactctcaaaaattgctaaaatagtag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19407815 907 - 31320352 ATAAGTTATACATTCATTCAAATATGGTAGCATTCATGAATATAATAAAATGATGACATTCTTTTTTAGACATGTTGTATTGAAAGTCTTTGTGAAATAGCCAAGTAAAAATTTTCAGTACGTTGTCTTATCATCACAACTACATGGTGAGTAACTGAAATCTCTGGAAGTAATGGGGATCATATAAAAAGAAGAGACTGCAAGATGAGAGAAGAACTAAGATGAAGAACAGGAATTACTATCATTGAAGGAAAAAGAAATCAAGAAGAGCACCCAGAAGTGTAACTGAAAAATCAGAAGAAAACAAAGTTATCAAAGACATAAGAAGGGAGTCA-TTAAAGGTCGATGCACATTCAGCATTTGGTGCATACTGCAGACCTAACAGGTAAAATTCTCAGAG-TATCTAcactgatgactttgggaagaacaatttcagtggagtaattaatgaagaaaaaactcaaacaaccatccagtgatgtgtcaaaagaactaggaaaaaatagacatcatgaatataaatagtgcttttcaaaagaatggctttgaaaagatagggaagagattagataccagttgaagAAATTTGCTTAGTTTTATATTCCACTTTGAAAATGTGGatgaatgagccgggaggacattatgctcagtgacataagtcaggcacagaaagacaaatactgcgtgatctcacttagatgtggaatctaacaatgttgaactcatagaggtagagaatagaatagtggttactaggggctgaaagaagggagagttaaggagatttccatcaaaggatataagatttc-actagataggaggaataagctcaagagatatattgtacaacatggtaactatagttaataacaatgtattgtagtctcaaaaattgataaaatagtag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1596895 903 + 2203405 ATAAGTTACACATTCATTCAAATATGGTAGCATTCATGGAGATGATAAAATGATGACATTCTTTTTTGGACATATTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAAAATTTTCAGTAAGTTGTCTTATCATC---ACTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGCAAGATGAGAGAAGAACTAAGATGAAGAGCAAGAATTACTATCATTGAAGGAAAAAGAAATCAAGAAGAGCACCCAGAAGTGTAATTGAAAAATCAGAAGAAAACAAAGTTACCAAAGACATAAGAAGAGAGTCA-TAAAAGGTCGATTCATGTTCAGCATTTGGTGCATATTGCAGACCTGACAGGTAAAATTCTCAGAG-TATCTACACTGATGACTTTAGGAAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAATAACCATGCAGTGATGTGTCAAAAGAACTATGAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAGTGGCTTTGAACAGATAGGGAAGAGATTAGATACCAGTTGAAGAAATTGGCTTAGTTTTATATTCCACTTTGAAAATGTGGatgaatgagccgggaggacattatgctcagtgaaataagtcaggcacagaaagacaaatactgcgtgatctcacttagatgtggaatctaacaatgttgaactcatagaagtagagaatagaatagtggttactaggggctgaaagaagggagagttggggagatatccatcaaaggatgtaagatttt-gctagataggaggaataagctcaagagatctatcgtacaacatggtaactatagttaataacaatgtattgtattctcaaatattgctaaaatagtag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3553703 904 - 14941987 ATAAGTTATACATTCATTCAAATATGGTAGTATTCATGGAGATAATAAAATGATGACATTCTTTTTTGGATATATTGTATTGAAAGTCTTTGTGAAACAGCCAAGTAAAAATTTTCAGTAAGTTGTCTTATCATCACAACTATATGGTGAGTAACTGAAATCTCTGGAG-TAATGGGGATCATATAAAAAGAAGAGACTGCAAGATGAGAGAAGAACTAAGATGAAGAGCAGGAATTATTATCATTGAAGGAAAAAGAAATCAAGAAGAGCACCCAGAAGTGTAATTGAAAAATCAGAAGAAAACAAAGTTATCAAAGAC--AATAAGAGAGTCA-TTAAGGGTCGACGCACGTTCAGCATTTGGTGCATATTGCAGACCTAACAGGTAAAATTCTCAGAG-TATCTACACTAATGACTTTAGGAAGAACAATTTCAGTGGAGTAATTAATGAAGAAACAACTCAAATAACCACACAGTGATGTGTCAAAAGAACTATAAAAAAATAGACATCATGAATATAAATAGTGCTTTTCAAAAGAGTGGCTTTGAAAAGATAGGGAAGAGATTAGATACCAGTTGAAGAAACTGACTTAGTTTTATATTCCACTTTGAAAATGTGGatgaatgagccgggaggacgttatgctcagtgaaataagtcagacacagaaagacaaatactgcgtgatctcacttagatgtggaatctaacaatgttgtactcacagaagtagagaatagaatgctggttactaggggctgaaagaagggagaattggggagatatccatcaaaggatataagatttc-gctagataggaggaataagctcaagagatttattgtacaacatggtaactatagttaataacaatgtattgtagtctcaaaaattgctaaaatagtag i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1227773 890 - 1406956 ATAAGTTATGTATTCATCCTATTGTGGTAGCATTCATGGAGATAATAAAATAATGAC---TTATTTTGGACATATGGTGCCGAAGGTCTTTGTGAAACAGCCAGGCAGAAATTTTCA-TAAGTTGGCCTATTGTCATAACAATATGGTTAGTAATTGAAATCCTTGGAGTTCAGTGAGATCATATAAAAAGAAGAAACTGCAATATGAGAAAAGAACTAATAGGAAGAGCAGGAATTATCATCATTGTAGGGAAAA--AATGAAGAGTGGCACCCAGAGGTGTAACTGAACAATCTGAAGATGACAATGTCATCCAAATCACAAGACAAGAGTTT-TTTAGAGTTGATGTATAATCAACA-TTGGAACGTTTTGCAG---TGATAAGTAAAATTCCCAGAATTGTCCAcactggtgattttaggaagaacaatttcagtggagtaattaatgaagaaataacccaaattaatgtgcagtgatgtatcaaaatgactataaaaaa--aagcatcacgaatatacatggtacttttcaaaagggtggcttctaagggataaaaaagaaaatagacactagctgaagaaatggacttaGTTTTATATTCCATTT-AAAAACTTGGatggatgaacctggatgatattatgttcagataaataagccagatacagaaagacaaatactgcatgatctcacttatatgtgaaatctaaaaaagtagaattcacagaagtagagagtagaatggtgattaccagaggctaggggaagggaggg-tggggagatttcggtccaaaaatacaaacttttagtgagataggaggaataagctcaagagatctattgtacagcatgatgattatagttaataacaatgtat-----tcttgcaaattgctaaaatagtag i proCoq1.NW_012148742v1 I 155 M 2134 e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=78654.000000 s hg38.chr18_GL383571v1_alt 29617 8 + 198278 ttatacta s panTro5.chr18 64985766 8 + 78221452 ttatacta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64108174 8 + 77229886 ttatacta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5327280 8 + 17472758 ttatacta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139366154 8 - 152096393 ttatacta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57318253 8 + 70235451 ttatacta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63009637 8 - 75711847 ttatacta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13562309 8 - 18804593 ttatacta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13179118 8 + 18905526 ttatacta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60008811 8 - 72318688 ttatacta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 342858 8 - 1517660 ttatacta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3442515 8 + 6513552 TTATACTA i colAng1.NW_012115433v1 C 0 I 1159 s calJac3.chr13 105217619 8 + 117903854 ttctacta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19408722 8 - 31320352 ttctacta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1597798 8 + 2203405 ttctacta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3554607 8 - 14941987 ttctacta i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I a score=3903929.000000 s hg38.chr18_GL383571v1_alt 29625 487 + 198278 tttcaagtgttctcatc-aaaataataactatgtgaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaacatgttgtacacagtaaatatatacaatttttatctgtcaatgaaaaCCTAAATTTAAAAACCT-TA-AAAA----AAGTGAGGTTAGTCATATTTAAATATTGATAGAAAGAGTCTGGGAGAAATAGAATTTGATA--AAAAA-TGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATGCTGACCACAGTGGAGTATTAGCCTTAGATCAGTGGAACCATAAGATTTCCATTATACTATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcagtaaaaagtctcttttctttgtccaagctctgaagcaactgaaagacacacacagatggtagcataagagaatagagatttaaatgtctattttacct s panTro5.chr18 64985774 488 + 78221452 ttttaagtgttctcatc-aaaataataactatgtgaggtaataatgcacatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaacatgttgtacacagtaaatatatacaatttttatctgtcaatgaaaaCCTAAATTTAAAAACCT-TA-AAAA----AAGTGAGGTTAGTCATATTTAAATATTGATAGAAAGAGTCTGGGAGAAATAGAATTTGATA--AAAAAATGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATGCTGACCACAGTGGAGTATTAGCCTTAGATCAGTGGAACCATAAGATTTCCATTATACTATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcagtaaaaagtctcttttctttgtccaagctctgaagcaactgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64108182 488 + 77229886 ttttaagtgttctcatc-aaaataataactatgtgaggtaataatgcacatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaacatgttgtacacagtaaatatatacaatttttatctgtcaatgaaaaCCTAAATTTAAAAACCT-TA-AAAA----AAGTGAGGTTAGTCATATTTAAATATTGATAGAAAGAGTCTGGGAGAAATAGAATTTGATA--AAAAAATGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATGCTGACCACAGTGGAGTATTAGCCTTAGATCAGTGGAACCATAAGATTTCCATTATACTATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcagtaaaaagtctcttttctttgtccaagctctgaagcaactgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5327288 487 + 17472758 ttttaagtgttctcatc-aaaataataactatgtgaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaacatgttgtacacagtaaatatatacaatttttatctgtcaatgaaaaCCTAAATTTAAAAACCT-TA-AAAA----AAGTGAGGTTAGTCATATTTAAATATTGATAGAAAGAGTCTGGGAGAAACAGAA-TTGATA--AAAAAATGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATGCTGACCACAGTGGAGTATTAGCCTTAGATCAGCGGAACCATAAGATTTCCATTATACTATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcagtaaaaagtctcttttctttgtccaagctctgaagcaactgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139366162 483 - 152096393 ttttaagtgttctcatc-aaaataataactatgtgaggtaataatgcatatgttatttagctcaatttagtaattacacaatgtatacatatttcaaaaacatgttgtacacagtaaatagatacaatttttatctgtcaatgaaaaCCTACATTTAAAAACCT-TA-AAAA----AAGTGAGGTTAGTCATATTTAAATATTGAT----AGAGCCTGGGAGAAATAGAATTTGATA--AAAAA-TGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAAATGGCATTCTGACCACAGGGGAGTATTAGCCTTAGATCAGCAGAACGATAAGATTTCCATTATACTATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcagtaaaaagtctcttttctttgtccgagctctgaagcaattgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57318261 487 + 70235451 ttttaagtgttcttatcaaaaataataactatgcaaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaaca---tgtacacagtaaatatatacaatttttatctgttaatgaaaatataaatttaaaaacct-tttaaaa----aagtgaggttaatcatgtttaaatattgatagaaacagcctggaagaaatataatttgata--aaaacaagtgctgagataaatcaattgaatgaatttttagggcagtagagatggcatcctgaccacagtggagtattagccttcgatcagcagaacgataagatttccattataccataatgacagtcagcaaggAGGTTCTTGGATATTATGAATGTcaacaaaaagtctcttttctttgtctaagctttgaagcaattgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63009645 487 - 75711847 ttttaagtgttcttatcaaaaataataactatgcaaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaaca---tgtacacagtaaatatatacaatttttatctgttaatgaaaaTATAAATTTAAAAACCT-TTTAAAA----AAGTGAGGTTAATCATGTTTAAATATTGATAGAAACAGCCTGGAAGAAATATAATTTGATA--AAAACAAGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATCCTGACCACAGTGGAGTATTAGCCTTCGATCAGCAGAACGATAAGATTTCCATTATACCATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcaacaaaaagtctcttttctttgtctaagctttgaagcaattgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13562317 487 - 18804593 ttttaagtgttcttatcaaaaataataactatgcaaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaaca---tgtacacagtaaatatatacaatttttatctgttaatgaaaatataaatttaaaaacct-tttaaaa----aagtgaggttaatcatgtttaaatattgatagaaatagcctggaagaaatataatttgata--aaaacaagtgctgagataaatcaattgaatgaatttttagggcagtagagatggcatcctgaccacagtggagtattagccttcgatcagcagaacgataagatttccattataccataatgacagtcagcaaggAGGTTCTTGGATATTACGAATGTcaacaaaaagtctcttttctttgtctaagctttgaagcaattgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13179126 487 + 18905526 ttttaagtgttcttatcaaaaataataactatgcaaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaaca---tgtacacagtaaatatatacaatttttatctgttaatgaaaaCATAAATTTAAAAACCT-TTAAAAA----AAGTGAGGTTAATCATGTTTAAATATTGATAAAAACAGCCTGGGAGAAATATAATTTGATA--AAAACAAGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATCCTGACCGCAGTGGAGTATTAGCCTTCGATCAGCAGAACGATAAGATTTCCATTATACCATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATATcaacaaaaagtctcttttctttgtccaagctttgaagcaattgaaagacacacacagatggtggcataagagactagagatttaaatgtccgttttacct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60008819 487 - 72318688 ttttaagtgttcttatcaaaaataaaaactacgcaaggtaataatgcatatgttatttagctcaatttagtcattacacaatgtatacatatttcaaaaaca---tgtacacagtaaatatatacaatttttatctgttaatgaaaaCATAAATTTAAAAACCT-TTAAAAA----AAGTGAGGTTAATCATGTTTAAATATTGATAGAAACAGCCTGGGAGAAATATAATTTGATA--AAAACAAGTGCTGAGATAAATCAATTGAATGAATTTTTAGGGCAGTAGAGATGGCATCCTGACCGCAGTGGAGTATTAGCCTTCAATCAGCAGAACGATAAGATTTCCATTATACCATAATGACGGTCAGCAAGGAGGTTCTTGGATATTATGAATGTcaacaaaaagtctcttttcttcgtccaagctttgaagcaattgaaagacacacacagatggtggcataagagaatagagatttaaatgtccattttacct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 342866 489 - 1517660 ttttaagtgttctcatcaaaaataataactatgcaaggtaataatgcatatattatttagctcaatttagtcattacacaatgtatacatatttcaaaaacatgttgtacacagtaaatatatacaatttttatctgttaatgaaaaCATAAATTTAAAAACCT-TT-AAAA----AAGTGAAGTTAATCATATTTAAATATTGATAAAAACAGCCTGGGAGAAATATAATTTGATA--AAAACAAGTGCTGAGATAAATCAACTGAATGAATTTTTAGGGCAGTAGAGATGGCATCCTGACTGCAGTAGAGTATTAGCCTTTGATCAACAGAACGATAAGATTTTCATTATACCATAATGACAGTCAGCAAGGAGGTTCTTGGATATTATGAATATcaacaaaaagtctcttttctttgtccaagctttgaagcaattgaaagacacacacagatggtggcataagaaaatagagatttaaatatccgttttacct i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105217627 486 + 117903854 ttttaagtgttcttatc-aaaatgataaatatgtgggataataatgcatatgttatttagctcaatttagtcattccacaatgtatacaaattccaaaaagagggtatgtacagtaaatatgtacaatttttatccatcagtgaaaac--aaaaTTTAAATGTTAAA-AAAAAGTGAAGTGA-GTTAATCATATTTAAATATTGATAGAAAAAGCCTGCGAGAAATAGAATTTGATT--AAAAAATATGCTGAGATAAATCAGTTGAATGAATATTTAGAGCAG-AGATAGAGCATCCTGACCACAGTGAAGTGTTAGGCTTGTATCAGTGGTACAATAAGATTTCCATTATAACATAATAATGGTCAGCAAGGAGGTTCTTGGATATCAGGAATGTcaat-aaaagtct--tttctttgtccaagctctgaagcaattgaaagacatacacatatggtgacataagagaatagagatttaaatatccattttatct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19408730 486 - 31320352 tttaaagtgttcttatc-aaaatgataaacatgtgaggtaataatgc--atgttatttagctcaatttagttattccacaatgtatacatattccaaaaacaggtcatgcacagtaaatatgtacaatttttatccatcaatgaaaaCATAAATTTTAAATGTT-AA-AAAAAGTGAAGTGA-GTTAGTTATATTTAAATATTGATAGAAAAAGCCTGGGAGAAATAGAATTTGATT-AAAAAAATGTGCTGAGATAAATCAAATGAATGAATTTTTAGAGCAG-AGATGGGGCATCCTGACCACAGTGAAGTATTAGGCTTATATCAGTGGAACAATAAGATTTCCATTATAACATAATTATGGTCAGCAAGGAGGTTCTTGGATATTAGGAATGTCAAT-AAGTCTCT--TTTCTTTGTCCAAGCTCTGAAGCAACTGAAAGACACACACAGATGGTAACATAAGAGAATAGAGATTTAAACATCCATTTTATCT i saiBol1.JH378121 C 0 I 346 s cebCap1.NW_016107689v1 1597806 490 + 2203405 ttttaagtgttctcatc-aaaatgataaatatgtgcggtaataatgcatatgttatttagctcaatttagtcattccacaatgtatacatattccaaaaacaggttatgcacagtaaatatgtacaatttttatccatcaatgaaaaCATAAATTTTAAATGTT-AA-AAAAAGTGAAGTGA-GTTAGTCATATTTAAATATTAATGGAAAAAGCCTGGGAGAAATAGAATTTGATTAAAAAAAATGTACTGAGATAAATCAATTGAGTGAATTTTTAGAGCAG-AGATGGGGCATCCTGACCACAGTGAAATATTAGGATTATATCAGTGGAACAATAAGATTTCCATTATAACATAATTATGGTCAGCAAGGAGGTTCTTGGATATTAGGAATGTCAGT-AAAAGTTTC-Tttttttgtcaaagctctgaagcaattgaaagacatacacagatggtggcataaaagaatacagatttaaatatccattttatct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3554615 479 - 14941987 ttttaagtgttctcatc-aaaatgataaatatgtgaggtaataatgcatatgttatttagctcaatttagtcattccacaatgtatacatattccaaaaacaggttatgcacagtaaatatgtacaatttttatccatcgatgaaaaCATAAATTTTAAATTTT-TT-AAAA----AAGTGA-GTTAGTCATATTTAAATATTGATAGAAAAAGCCTGGGAGAAATAGAATTTGAT---AAAAAATGTGCTGAGATAAATCAATTGAATGAATTTTTAGAGCAG-AGATGGGGCATCCTGATCACAG-----TATTAGGCTTATATCAGTGGAACAATAAGATTTCCATTATAACATAATTAAGGTCAGCAAGGAGGTTCTTGGATATTAGGAATGTCAAT-ATAAGTctcttttctttgtcctagccctgaagcaattgaaagatatacacagatggtgaaataagagaatagagatttaaatatccattttatct i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e colAng1.NW_012115433v1 3442523 1159 + 6513552 I a score=1515982.000000 s hg38.chr18_GL383571v1_alt 30112 181 + 198278 ggaagaaaggtacattggaagagatggcttagggctgtagtcaaatgggcttgcttacattgcatgctaaaattTACCCTCAACTCTGAACA-CCTCCTAGAACTCTGTTCTTATAAAGG-----TTAAGCACAGAAATCTAAATGAAGGTTTTCTATGGGAAAACTGGCTCACTAGAA------------------AATAATAA s panTro5.chr18 64986262 181 + 78221452 ggaagaaaggtacattggaagagatggcttagggctgtagtcaaacgggcttgcttacattgcatgctaaaattTACCCTCAACTCTGAACA-CCCCCTAGAACTCTGTTCTTATAAAGG-----TTAAGCACAGAAATCTAAATGAAGGTTTTCTATGGGAAAACTGGCTCACTAGAA------------------AATAATAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64108670 181 + 77229886 ggaagaaaggtacattggaagagatggcttagggctgtagtcaaacgggcttgcttacattgcatgctaaaattTACCCTCAACTCTGAACA-CCCCCTAGAACTCTGTTCTTATAAAGG-----TTAAGCACAGAAATCTAAATGAAGGTTTTCTATGGGAAAACTGGCTCACTAGAA------------------AATAATAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5327775 191 + 17472758 ggaagaaaggtacattggaagagatggcttagggctgtagtcaaacgggcttgcttacattgcatgctaaaattTACCCTCAACTCTGAACA-CC-CCTAGAACTCTGTTCTTATAAAGGTTAATTTAAGCACAGAAATCTAAATGAAGGTTTTCTATGGGAAAACTGGCTCACTAGAA------------aataataataataa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139366645 181 - 152096393 ggaagaaaggtacattggaagagatggcttagggctgtagtcaaatggacttgcttacattgcatgctaaaattTACCCTCAACTCTGAACA-CCCCCTAGAACTCTGTTCTTATAAAGG-----TTAAGCACAGAAATCTAAATGAGGGTTTTCTATGGGAAAACTGGCTCACTAGAA------------------aataataa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57318748 194 + 70235451 ggaagaaaggtacattggaggagatggcttaggggtgtagtcaaatgggcttgctTACATTACATGCTAACATTTACCCTCAACTCTGAACAGCCCCATAGATCTCTGTTCTTATAAAGG-----TTAAGCACAGAAACCTAAATGAGGGTTTTCTATGGGAACACTGGCTCACTAGAA------aataataataataataataa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63010132 197 - 75711847 ggaagaaaggtacattggaggagatggcttaggggtgtagtcaaatgggcttgctTACATTACATGCTAACATTTACCCTCAACTCTGAACAGCCCCATAGAGCTCTGTTCTTATAAAGG-----TTAAGCACAGAAACCTAAATGAGGGTTTTCTATGGGAACACTGGCTCACTAGAA---aataataataataataataataa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13562804 200 - 18804593 ggaagaaaggtacattggaggagatggcttaggggtgtagtcaaatgggcttgctTACATTACATGCTAACATTTACCCTCAACTCTGAACAGCCCCATAGAGCTCTGTTCTTATAAAGG-----TTAAGCACAGAAACCTAAATGAGGGTTTTCTATGGGAACACTTGCTCACTAGAAaataataataataataataataataa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13179613 182 + 18905526 ggaagaaaggtacattggaggagatggcttaggggtgtagtcaaatgggcttgctTACATTACATGCTAACATTTACCCTCAACTCTGAACAGCCCCATAGAGCTCTGTTCTTATAAAGG-----TTAAGCACAGAAACCTAAATGAGGGTTTTCTATGGGAACACTGGCTCACTAGAA------------------aataataa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60009306 194 - 72318688 ggaagaaaggtacattggaggagatggcttaggggtgtagtcaaatgggcttgctTACATTACATGCTAACATTTACCCTCAACTCTGAACAGCCCCATAGAGCTCTGTTCTTATAAATG-----TTAAGCACAGAAACCTAAATGAGGGTTTTCTATGGGAACACTGGCTCACTAGAA------aataataataataataataa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 343355 194 - 1517660 ggaagaaaggtacattggaggagatggcttaggggtgtagtcaaatgggcttgctTACATTACATGCTAACATTTACCCTCAACTCTGAACAGCCCCATAGAGCTCTGTACTTATAAAGG-----TTAAGCACAGAAACCTAAATGAGGGTTTTCTATGGGAACACTGGCTCACTAGAA------aataataataataataataa i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105218113 193 + 117903854 tgaagaaacatacattggaggagatggcttagaggtgtagacaaatggtcttgcttacattatacactaaaattTACCCTCAAGTCTGAACACTCCCATAGAACTCTGCTCTTA-AAAGA-----TTAAGCACAGAAATCTAAAACAGAGTTTTCAATGGGAAAATTGGCTCACTAGAA------aatagtaataataataataa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19409562 194 - 31320352 GAAAGAAATGTACATTGGAGAAGATGGCTTAGGGGTGTAGACAAATGGTCTTGCTTACATTATACGCTAAAATTTACCCTCAAGTCTGAACACTCCCACAGAACTCTGCTCTTATAAAGG-----TTAAGCACGGAAATCTAAATCAGGGTTTTCAATGGGAAAGCTGGCTCACTAGAA------aataataataataataataa i saiBol1.JH378121 I 346 C 0 s cebCap1.NW_016107689v1 1598296 194 + 2203405 ggaaaaaatgtacattggaggagatggcttaggggtgtagacaagtggtcttgctTACAATATACGCTAATATTTACCCTCAAGTCTGAACACTCCCATAGAACTCTGCTCTTATAAATG-----TTAAGCACAGAAATCTAAATCAGGGTTTTCAATGGGAAAGCTGGCTCACTAGAA------aataataataataataataa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3555094 194 - 14941987 ggaagaaacatatattggaggaggtggtttaggggtgtagacaaatggtcttgcttacattatacgctaaaattTACTCTCAAGTCTGAACACTCCCATAGAACTCTGCTCTTATAAAGG-----TTAAGCACAGAAATCTAAATCAGGATTTTCAATGGGAAAACTGGCTAACTAGAA------aataataataataataatGA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11205458 2397 - 20685099 I e colAng1.NW_012115433v1 3442523 1159 + 6513552 I a score=-14440.000000 s hg38.chr18_GL383571v1_alt 30293 5 + 198278 TA------------AGA s panTro5.chr18 64986443 5 + 78221452 TA------------AGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64108851 5 + 77229886 TA------------AGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5327966 5 + 17472758 ta------------aGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139366826 16 - 152096393 taataattataa-GAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57318942 17 + 70235451 taataataataatgaga i rheMac8.chr18 C 0 I 9 s macFas5.chr18 63010329 17 - 75711847 taataataataatgaga i macFas5.chr18 C 0 I 9 s macNem1.NW_012016688v1 13563004 17 - 18804593 taataataataatgaga i macNem1.NW_012016688v1 C 0 I 9 s cerAty1.NW_012001075v1 13179795 17 + 18905526 taataataataatgaga i cerAty1.NW_012001075v1 C 0 I 9 s chlSab2.chr18 60009500 10 - 72318688 taatga-------gaga i chlSab2.chr18 C 0 I 11 s manLeu1.NW_012106698v1 343549 17 - 1517660 taataataataataata i manLeu1.NW_012106698v1 C 0 I 11 s calJac3.chr13 105218306 4 + 117903854 taat------------- i calJac3.chr13 C 0 I 14 s saiBol1.JH378121 19409756 17 - 31320352 taatgatgatgatgaga i saiBol1.JH378121 C 0 I 16 s cebCap1.NW_016107689v1 1598490 8 + 2203405 gaga---------gaga i cebCap1.NW_016107689v1 C 0 I 16 s aotNan1.NW_018502140v1 3555288 2 - 14941987 GA--------------- i aotNan1.NW_018502140v1 C 0 I 14 s otoGar3.GL873546 11207855 5 - 20685099 ------------TAAAA i otoGar3.GL873546 I 2397 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e colAng1.NW_012115433v1 3442523 1159 + 6513552 I a score=7179645.000000 s hg38.chr18_GL383571v1_alt 30298 739 + 198278 GAGATAGAGAGAAGTATGTAGCTAAGCATGTCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGGTCACA---------AGATTGACCCTTGGGAAGTACTTCACATGGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTACTCATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggcattgtatatgttaattagctcgatttagctattccatgggatatt-----------tcaaaacattatgataaacatgataaatatatacaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCCAGCACTTTTGTGAGAACAAATATACTACTTGGATGCTGTTACAAAGCGTGAGAAAGCTCACTATAAATGCTAGAAAATGATGTTTTTT-AAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCAAACCACCTGGTTACATAATTATTTTTATACCAACACAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATG--TGCAGCAGTGATAG------AAAAGGAA--------------------------------------ATGAAAGTTCTTC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAATAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------AAAAAAAA--GTATTTAAATAACTGAATGGA s panTro5.chr18 64986448 739 + 78221452 GAGATAGAGAGAAGTATGTAGCTAAGCATGTCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGGTCACA---------AGATTGACCCTTGGGAAGTACTTCACATGGAGACTAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTACTCATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggcattgtatatgttaattagctcgatttagctattccatggggtatt-----------tcaaaacattatgataaacatgataaatatatacaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCCAGCACTTTTGTGAGAACAAATATAATACTTGGCTGCTGTTACAAAGCGTGAGAAAGCTCACTATAAATGCTAGAAAATGATGTTTTTT-AAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCAAACCACCTGGTTACATAATTATTTTTATACCAACACAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATG--TGCAGTAGTGATAG------AAAAGGAA--------------------------------------ATGAAAGTTCTTC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAATAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------AAAAAAAA--GTATTTAAATGACTGAATGGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64108856 739 + 77229886 GAGATAGAGAGAAGTATGTAGCTAAGCATGTCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGGTCACA---------AGATTGACCCTTGGGAAGTACTTCACATGGAGACTAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTACTCATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggcattgtatatgttaattagctcgatttagctattccatggggtatt-----------tcaaaacattatgataaacatgataaatatatacaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCCAGCACTTTTGTGAGAACAAATATAATACTTGGCTGCTGTTACAAAGCGTGAGAAAGCTCACTATAAATGCTAGAAAATGATGTTTTTT-AAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCAAACCACCTGGTTACATAATTATTTTTATACCAACACAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATG--TGCAGTAGTGATAG------AAAAGGAA--------------------------------------ATGAAAGTTCTTC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAATAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------AAAAAAAA--GTATTTAAATGACTGAATGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5327971 734 + 17472758 GAGATAGAGAG----ATGTAGCTAAGCATGTCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGGTCACA---------AGATTGACCCTTGGGAAGTACTTCACATGGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTACTCATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggcattgtatatgttaattagctcaatttagctattccatggggtatt-----------tcaaaacattatgataaacatgataaatatatacaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCCAGCACTTTTGTGAGAACAAATGTACTACTTGGCTGCTGTTACAAAGCATGAGAAAGCTCA-TATAAATGCTAGAAAATGATGTTTTTT-AAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCAAACCACCTAGTTACATAATTATTTTTATACCAACACAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATG--TGCAGCAGTGATAG------AAAAGGAA--------------------------------------ATAAAAGTTCTTC--CAAG---ACAGTAGTTGAAGTTTTAGACTCTA----AGAAAAATAGA-----TATCAAGAAATTTGAAGTTCTCGTGTGATT--------AAAAAAAA--GTATTTAAATAACTGAATGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139366842 738 - 152096393 GAGAAAGAGAGAAGTATGTAACTAAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGAAAATATAAAACAGGTCACA---------AGATTGACCCTTGGGAAGTACTTCACATGGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggcattatgtatgttaattagcttgatttagctattccatggggtatt-----------tcaaaacattatgataaacatgatacatatacacattttttatttgtcaattaaaCCTTTTAAAAAGTGATAT-AAAAGA------------------------------------------GCATTTACTGCCCAGCACTTTTGTGAGAACAAATACCCTACGTGGCTGCTGTTATAAAGTGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTTTTTT-AAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCCAACCACCTGGTTACATAATTATTTTTATACCAACGCAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATG--TGTAGTAGTGACAG------AAAAGGAA--------------------------------------ATGAAAGTTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAATAGA-----TATCAAGAAATTTGAAGTTCTTGTGTGATT---------AAAAAAA--GTATTTAAATAACTGAATGGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57318968 740 + 70235451 gagaaagagagaAGTACATAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGTCCACA---------AGATTGACCATTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggtaatgtgtatgttaattagttcaatttagctattccatggggtatt-----------tcaacacattatgataaacatgataaatatacgcaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTTGTGAGGACAAATACACTACTTGGCAGCTGTCACAAAGCGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAACGTCATTTGAGGGCCCAATTGAAGTTGCAACCCTTGAATTTATAATGTTACCAAGCCACCTGGTTACATAATCATTTTTATGCCA---CAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCATGAATG--TGTAGCAGTGACAG------AAAAGGAA--------------------------------------ATGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------TAAAAAAA--GTATTTAAATATCTGAATGGA i rheMac8.chr18 I 9 C 0 s macFas5.chr18 63010355 740 - 75711847 gagaaagagagaAGTACATAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGTCCACA---------AGATTGACCATTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Agaggtaatgtgtatgttaattagttcaatttagctattccatggggtatt-----------tcaacacattatgataaacatgataaatatacgcaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTTGTGAGGACAAATACACTACTTGGCAGCTGTCACAAAGCGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAACGTCATTTGAGGGCCCAATTGAAGTTGCAACCCTTGAATTTATAATGTTACCAAGCCACCTGGTTACATAATCATTTTTATGCCA---CAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCATGAATG--TGTAGCAGTGACAG------AAAAGGAA--------------------------------------ATGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------TAAAAAAA--GTATTTAAATATCTGAATGGA i macFas5.chr18 I 9 C 0 s macNem1.NW_012016688v1 13563030 740 - 18804593 gagaaagagagaAGTACATAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGTCCACA---------AGATTGACCATTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggtaatgtgtatgtttattagttcaatttagctattccatggggtatt-----------tcaacacattatgataaacatgataaatatacgcaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTTGTGAGGACAAACACACTACTTGGCAGCTGTCACAAAGCGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAACGTCATTTGAGGGCCCAATTGAAGTTGCAACCCTTGAATTTATAATGTTACCAAGCCACCTGGTTACATAATCATTTTTATGCCA---CAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCATGAATG--TGTAGCAGTGACAG------AAAAGGAA--------------------------------------ATGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------TAAAAAAA--GTATTTAAATATCTGAATGGA i macNem1.NW_012016688v1 I 9 C 0 s cerAty1.NW_012001075v1 13179821 740 + 18905526 gacagagagagaAGTACATAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGTCCACA---------AGATTGACCCTTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGGAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggtaatgtgtatgttaattagttcgatttagctattccatggggtatt-----------tcaacacattatgataaacatgataaatatacgcaatttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTCGTGAGGACAAATACACTACTTGGCTGCTGTCACAAAGCGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAACGTCATTTGAGGGCCCAATTGAAGTTGCAACCCTTGAATTTATAATGTTACCAAGCCACCTGGTTACATAATCATTTTTATACCA---CAAAGAAAAGGAAAACTTTATATTAATCTATGAATAAAATTATTTTCATGAATG--TGTAGCAGTGACAG------AAAAGGAA--------------------------------------ATGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCCCATGTGATT--------TTAAAAAA--GTATTTAAATATCTGAATGGA i cerAty1.NW_012001075v1 I 9 C 0 s chlSab2.chr18 60009521 740 - 72318688 gagagagagagaAGTACATAGCAGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGTCCACA---------AGATTGACCATTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggtaatgggtatgttaattagttcgatttagctattccatggggtatt-----------tcaacacattatgataaacatgataaatacacgcaatttttatttgtcaattaaaaCTTCTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTTGTGAGGACAAATACACTACTTGGCTGCTGTCACAAAGCGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAACGTCATTTGAGGGCCCAATTGAAGTTGCAACCCTTGAATGTATAATGTTACCAAGCCACCTGGTTACATAATCATTTTTATACCA---CAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCATGAATG--TGTAGCAGTGATAG------AAAAGGAA--------------------------------------ATGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------TAAAAAAA--GTATTTAAATATCTGAATGGA i chlSab2.chr18 I 11 C 0 s manLeu1.NW_012106698v1 343577 740 - 1517660 gagagagagagaAGTACATAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAGTCCACA---------AGATTGACCATTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAATAAGCAAAGATATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggtaatgtgtatgttaattagttcgatttagctattccatggggtatt-----------tcaacacattatgataaacatgataaatatacgcagtttttatttgtcaattaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTCGTGAGGACAAATACACTACTTGGCTGCTGTCACAAAGCGTGAGAACGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAACGTCATTTGAGGGCCCAATTGAAGTTGCAACCCTTGAATTTATAATGTTACCAAGCCACCTGGTTACATAATCATTTTTATACCA---CAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCATGAATG--TATAGCAGTGACAG------AAAAGGAA--------------------------------------CTGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGACTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCCCATGTGATT--------TAAAAAAA--GTATTTAAATATCTGAATGGA i manLeu1.NW_012106698v1 I 11 C 0 s colAng1.NW_012115433v1 3443682 740 + 6513552 gagagagagagaAGTACATAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATACAGAACAGTCCACA---------AGAGTGACCCTTGGAAAGTACTTCACATAGAGACCAGGGTAGTAGCAGAATCAGATGTATACAGTTGTAGTTACTTCTGTAGATTTGTTGAGGAGAAATTAATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGTGGTAAGaagcaaagatatctt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaggtaacgtgtatgttaattagttcgatttagctattccatggggtatt-----------tcaacacaatatgataaacatgataaatatacgcaatttttatttgtcaattaaaaCTTTCAAAAAGTGAAAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCACTTTTGTGAGGACAAATACACTACTTGGCTGCTGTCACAAAGCGTGAGAAAGCTCATTATAAATGCTAGAAAATGATGTGTTTT-AAAAAGTCATTTGAGGGCCCAGTTGAAGTTGCAACCCTTGAATTTATAATGTTACCAGGCCACCTGGTTACATAATCATTTTTATACCA---CAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCATGAATG--TGTAGCAGTGACAG------AAAAGGAA--------------------------------------GTGAAAGCTCTGC--CAAG---AGAGTAGTTGAAGTTTTAGATTATA----AGAAAAACAGA-----TATCAAGAAATTTGAAGTTCTCATGTGATT--------TTAAAAAA--GTGTTTAAATATCTGAATGGA i colAng1.NW_012115433v1 I 1159 C 0 s calJac3.chr13 105218324 710 + 117903854 AAGAGAAAGAAAAGTCTGTAGCAGGGCATGCCTATTCACGTAAATTAGGTAAG--TGGTTGGTGGAAATATAAAACAAGCCACA---------AGATTTGCCCTTGGGAAGTACTTCACATGGAGACCAGAGTAGTAGCAAAATCAGATGTGTACAGCTGTAGTTACTTTTGTGGATCTGATGAGGAGA----ATTTAATTCTTTTCTGATGGTT-----------------------------------------------AATTTGAGGAAACAAGCAAAGATATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taaggtaatgtgcatg---------ttaatttagctattctgt-gggtatt-----------ccaaaatattgtgataaacatgataaatatatccaattttcattcatcaaGTACAACTTTTTAAAAATGAGGT-AAAAGA------------------------------------------GCATTTACTACTT-GCACTT--------------------------TGGTGGCATAAAGCATGAGAACGCTCATTATAAATTACATAGCATGATGTTTTTCAAAAAAGGCATTTGGGGGCCCAACTGAAGTGACAACCCTTGAATTTATAATGCTACCAAACCACCTGGTTACATAATCATTTTTATGTGAACACAAAGAAAAGGAAAACTTTATGTTGATCTCTGAATAAAATTATTTTCAGGAATGTATGTAGCAGTGATAT------AAAAAGAA--------------------------------------ATGAAAGTTCTGC--CAAG---AGAGTAGCTGAAGTTATAGAGGATA----GAAAAAATAAAGGTATTATCAAGGAATTTGAAGTTCTCCTATGATT--------AAAAAAAT--GCATTTAAATATCTGAATGAA i calJac3.chr13 I 14 C 0 s saiBol1.JH378121 19409789 801 - 31320352 aagagaaagaAAAGTATGTAGCTGAGCATGCCGATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATATAAAACAAGCCAGA---------AGATTTACCCTTGGGAAGTACTTCACATGGAGACCAGAGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTTCTGATGATT-----------------------------------------------TATTTGAGGTAACAAGCAAAGATATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taaggtaatgtgtatgataattagtttgatttagctattctgtggggtatt-----------tcaaaatattatgataaacatgataaatatatccagtttttacttgtcaagtaaaaCTTTTAAAAAGTGAGAT-AAAAGACAACAGAACTGGTATTAAAGTGATCCTAGCACTTTTGTGAGGACATTTACTACCTAGCACTTTTGTGAGGACAAATACACTACTAGGCTGGTGTTATAAAGTATGAGAAGGCTCATAATAAATTATATAGCATGATGTTTTTCAAAAAAGGCATTTGAGGGCCCAATTGAAGTGGCAACCCTTGAATTTATAATGCTACCAAACCGCCTGGTTACATAATCATTTTTATGCCAACACAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCAGGAACG--TGTAGCAGTGATATTAAAAAAAAAAAAA--------------------------------------ATGAACATTCTGC--CAAG---AGAGTAACTGAAGTTTTAGAGGATA----GGAAAAATAAAGAGTTTATCAAGGAATTTGAAGTTCTCCTGCaattaaaaaaaaaaaaaaaa--gtatttaaatatCTGAATGAA i saiBol1.JH378121 I 16 C 0 s cebCap1.NW_016107689v1 1598514 746 + 2203405 aagagagagaAAAGTATGTAGCTTAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGCTGGAAATATAAAACAAGCCACA---------AGATTTACCCTTGGGAAGTACTTCACATGGAGACCAGAGTAGTAGCAAAATCAGATGTGTACAGTTGCAGTTACTTCTGTAGATTTGTTGAGGAGA----AATTAATTCTTTTCTGATGATT-----------------------------------------------TGTTTGAGGTAACAAGCAAAGAT-TTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taaggtaatgtgtaagttaactagttcgatttagctattctgtggggtatt-----------tcaaaatattatgataaacgtgataaatatatccaatttttatttttcaagtaaaaCTTTTAAAAAGTGAGAT-AAAAGA------------------------------------------GCATTTACTGCCTAGCAGTTTTGTGAGGACAATTACACTACTAGGCTGGTGTTATAAAGCATGAGAAAGCTCATTGTAAATTATATAGCATGATGTTTTTCAAAAAAGGCATTTGAAGGCCCAATTGAAGTGGCAACCCTTGAATTTATAATACTACCAAACCACCTGGTTACATAATCATTTTTATGCCAACACAAAGAAAAGGAAAACTTTATATTGATCTATGAATAAAATTATTTTCAGGAATG--TGTAGCAGTGATAT------AAAAAGAA--------------------------------------ATGAAAGTTCTGC--CAAG---AGAGTAACTGAAGTTTTAGAGGATA----GGAAAAATAAAGAGATTATCAAGGAATTTGAAGTTCTCCTGAGATT------AAAAAAAAAT--GTATTTAAATATCTGAATGAA i cebCap1.NW_016107689v1 I 16 C 0 s aotNan1.NW_018502140v1 3555304 741 - 14941987 AAGAGAAAGAAAAGTAGGTAGCTGAGCATGCCTATTCATGTAAATTGGGTAAT--TGGTTGGTGGAAATAT-AAACAAGCCACA---------AGATTTACCCGTGGGAAGTACTTCACATGGAGACCAGAGTAGTAGCAAAATCAGATGTGTACAGGTGTAATTGCTTTTGTAGATTTGTTGAGGAGA----AATTAATTCTTTTCTGATGATT------------------------------------------------ATTTGAGGTAACAAGCAAAGACATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taaggtaatgtgtatgttaattagctcgatttagctattctgcggggtatt-----------tcaaaatattatgataaacatgataaatatatccaatttttgtttgtcaagtaaaaCTTTTAAAAAGTAAGAT-AAAAGA------------------------------------------GCATTTACTACCTAGTACTTTTGTGAGGACAAATACACTACTAGGCTGGTGTTATAAAGCATGAGAAAGCTCATTATAAATTATATAGCATGATGTTTTTCAAAAAAGGCATTTGAGAGCCCAATTGAAGTGGCAACCCTTGAATTTATAATGCTACCAAACCACCTGGTTACATAATCATTTTTATGCCAACACAAAGAAAAGGAAAACTTTATATTGATCTCTGAATAAAATTATTTTCAGGAATG--TGTAGCAGTGATAT------AAAAAGAA--------------------------------------ATGAAAGTTCTGC--CAAG---AGAGTAGCTGAAGTTTTAGAGGATA----GGAAAAATAAAGAGATTATCAAGGAATTTGAAGTTCTCCTGCAATT--------AAAAAAAT--GTATTTAAATATCTGAATG-- i aotNan1.NW_018502140v1 I 14 C 0 s otoGar3.GL873546 11207860 1022 - 20685099 ---AAGAAGAGAAAGTAGTGGCCGAGCACAGGCATTCTCACAAATTGAGTAATGCTGGTCTCCGGAAAGGCAAA--AGGGCAAAATGGGTGGGAGATTTACCCCAGGGAAGGCTTTCACCTGGAGAC-AGAGCAGTGGCAGAATCAGGTGTGTGTAACTGCGGTGACTTTTATAGGTTTGTCGAGCAGAAATTGACGAATTCCTTTCTGATGATTTCTTTCTTTCTTTCTTTTCTTTAATCCTGTGACAAATTATGATGATTTCTTTGCGATAAGAAGCCAAGATAGCTTTCTAAGACGGAAGATTTCAGGTTTGAGTGGTGAATAGTGTCAAAGAGCTGCTGTGGCTCCTTTGAAAGGGCAGGCAGACCAGAGAGGCATGAGCAGATTGAAAGAGGAGTTTGATGTCtattctcaaaacctgctgagggaggagattttaagtgttctcactacacacacaaaaggtgtgtgaagtaatgcataggaccatt--ctctgtttcgctactctgcgatatatgatatacacagatcaaaacattacgttgcacatggtaagtaaac------tttatttgtcacttaaaaaTGTTTTAAAGTGAGGGAAAAAGA------------------------------------------GCATTTACCACGGAGAACTTTTGCAAAAATTAATACAGTACCTGGCTGTCCTTATGAAACATGAGGTAGCTCATTATAAATGATATACTGTTAAAATT----AAAAAGGTA-TTGAGGGGTGAATTGAAATTGTAATACTTGAATTTATGAAGGCATCAGACTGCCTGGTAACCTGATTACTTTTCTAATAAGAGAAAGAGATGGAAAACTTTATATTCATCTATGCACTAAGT---TTTCAGGAATG--TGTATCAGAGATAA------AAAAAAAATAGTAAATGTTTGTGGCCACAAGGAAAATGACTGGGCCATGAGAAATTTACAGCAAGAGAAGAAGAACAAAAAATTTAAAAGATGGAGTAAAATAAGAGA-----CCTCCAGGGATTTGAAGTTATTGTGTCATT--------TTAAAAAATGGTATTTAAATACATGCATTAA i otoGar3.GL873546 C 0 I 201 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I a score=1379892.000000 s hg38.chr18_GL383571v1_alt 31037 134 + 198278 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATACATTT---GTGTTTTTAAGTCCCACCACTGAAAATTCTAATGAGTGTA s panTro5.chr18 64987187 134 + 78221452 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GTGTTTTTAAGTCCCACCACTGAAAATTCTAATGAGTGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64109595 134 + 77229886 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GTGTTTTTAAGTCCCACCACTGAAAATTCTAATGAGTGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5328705 134 + 17472758 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GTGTTTTTAAGTCCCACCACTGAAGATTCTAATGAGTGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139367580 134 - 152096393 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATACTT---GTGTTTTTAAGTCCCACCATTGAAAATTCTAATGAGTGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57319708 134 + 70235451 AGTTGTATAAGTTTAAAGCACTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GAGTTTTTAAGTCCCACCATTGAAAATTCTAATGAGTGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63011095 134 - 75711847 AGTTGTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GAGTTTTTAAGTCCCACCATTGAAAATTCTAATGAGTGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13563770 134 - 18804593 AGTTGTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GAGTTTTTAAGTCCCACCATTGAAAATTCTAATGAGTGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13180561 134 + 18905526 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GGGTTTTTAAGTCCCACCATTGAAAATTCTAATGAGTGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60010261 134 - 72318688 AGTTTTATAAGTTTAAAGCATTGTGTTCAGACACTGTGACATATTTGATTTATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GGGTTTTTAAGTTCCACCATTGAAAATTCTAATAAGTGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 344317 134 - 1517660 AGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGA-----ATATAGATTCTGGTATCTCACATATATTT---GGGTTTTTAAGTCCCACCATTGAAAATTCTAATGAGTGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3444422 134 + 6513552 AATTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACatatttgatatatgatgatatttaa-----atatagattctggtatctcacatatATTT---GGGTTTCTAAGTCCCACCATTGAAAATTCTAATAAGTGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105219034 132 + 117903854 AGTTGTAGAAGTTTAAAGGATTGTGTTCAGAGACTGTGACATAGTTGATATATGATGATATTTGA-----ATAT--ATTCTGGTATCTCAAATAAATTT---CTTTTTTTAAGTCCCACCTTTGAAAATTCTAGTGAGTGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19410590 132 - 31320352 AGTTTTAGAAGTTTAAAGCATTGTGTTCAGAGACTGTGACATATTTTATATATGATGATATTTGA-----ATAT--ATTCTGGTATCTTAAATAAATTT---CCGTTTTTAAGTCCCACCTTTGAAAATTCTAGTGAGTGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599260 132 + 2203405 AGTTTTAGAAGTTTAAAGCATTATGTTCAGAGACTGTGACGTATTTGATATATGATGATATTTGA-----ATAT--ATTCTGGTATCTCAAATAAATTT---CTGTTTTTAAGTCCCACCTTTGAAAATTCTAGTGAGGGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556045 118 - 14941987 --------------AAAGCATCGTGTTCAGAAACTGTGACATATTTGATATGTGATGATATTTGA-----ATAT--ATTCTGGTATCTCAAATAAATTT---CTGTTTTTAAGTCCCACCTTTGAAAATTCTAGTGAGTGTA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11209083 129 - 20685099 AGCTTTGGAAGATTAAAGC-------------AATGTGATATACTTGACATACAATGATATTTGAAATGTAGATACATTCTGTTATCTGACATACAATTCTAGGGTTTTCAAATGCTGCCCTTGAAAATTCTAATGGatgta i otoGar3.GL873546 I 201 I 26 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I a score=2532604.000000 s hg38.chr18_GL383571v1_alt 31171 277 + 198278 GAA-----TATTTTTT-TGAGTCAGAATTAGATTAATACGTTTCTGTTTACTTTTGTTGAGCTGCCAAAGCTTCTGCCACCTTAAGAAAATCAATTACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGT-AAAAATATATTAAATTGCTATAAGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCT s panTro5.chr18 64987321 277 + 78221452 GAA-----TATTTTTT-TGAGTGAGAATTAGATTAATACGTTTCTGTTTACTTTTGTTGAGCTGCCAAAACTTCTGCCACTTTAAGAAAATCAATTACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGT-AAAAATATATTAAATTGCAACAAGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64109729 277 + 77229886 GAA-----TATTTTTT-TGAGTGAGAATTAGATTAATACATTTCTGTTTACTTTTGTTGAGCTGCCAAAGCTTCTGCCACTTTAAGAAAATCAATTACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGT-AAAAATATATTAAATTGCAACAAGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5328839 277 + 17472758 GAA-----TATTTTTT-TGAGTCAGAATTAGATTAGTATGTTTCTGTTTACTTTTGTTGAGCTGCCAAAGCTTCTGCCACTTTAAGAAAATCAATTACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTGGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139367714 277 - 152096393 GAA-----TATTTTTT-TGAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTGCCAAAGCTTCTGCCACTTTAAGAGAATCAATTATAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAGAACATTTAAAACTATCAACACCATTGCTTTTTTAACAAGTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57319842 260 + 70235451 GAA----TTTTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTACTAAAGCTTCTGCCACTTTAAGAAAATCAATCACAGCCAATTTATGTCTGGATTTCAGAAAAGCTATTTGTAAGAATCTAAATTTAGGAAAACAAAAT------------------AATATTATAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAAAGCATTTAAAACTATCAATACCATTGCTTCTTTAACAAGTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63011229 260 - 75711847 GAA----TTTTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTACTAAAGCTTCTGCCACTTTAAGAAAATAAATCACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGTAAGAATCTAAATTTAGGAAAACAAAAT------------------AATATTATAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAAAGCATTTAAAACTATCAATACCATTGCTTCTTTAACAAGTTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13563904 260 - 18804593 GAA----TTTTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTACTAAAGCTTCTGCCACTTTAAGAAAATAAATCACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGTAAGAATCTAAATTTAGGAAAACAAAAT------------------AATATTATAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAAAGCATTTAAAACTATCAATACCATTGCTTCTTTAACAAGTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13180695 261 + 18905526 GAA---TTTTTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTACCAAAGCTTCTGCCACTTTAAGAAAATCAATCACAGCCAATTTATGTCTGGATTTCAAGAAAGCTATTTGTAAGAATCTAAATTTAGGAAAACAAAAT------------------AATATTATAAGCCAATATTGGT-AAAAACATATTAAATTGCTACAAGCACAATAATACAAAAGCATTTAAAACTATCAATACCATTGCTTCTTTAACAAGTTCT i cerAty1.NW_012001075v1 C 0 I 122 s chlSab2.chr18 60010395 264 - 72318688 GAATTTTTTTTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTCTTTACTTTTGTTGAGCTACTAAAGTTTCTGCCACTTTAAGAAAATCAATCACAGTCAATTTGTGTCTGGATTTCAGGAAAGCTATTTGTAAGAATCTAAATTTAGGAAAACAAAAT------------------AATAATATAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAAAGCATTTAAAACTATCAGTACCATTGCTTCTTTAACAAGTTCT i chlSab2.chr18 C 0 I 72 s manLeu1.NW_012106698v1 344451 264 - 1517660 GAATTTTTTTTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTACCAAAGCTTCTGCCACTTTAAGAAAATCAATCAGAGCCAATTTATGTCTGGATTTCAGAAAAGCTATTTCTAAGAATCTAAATTTAGGAAAACAAAAT------------------AATATTATAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACAAAAGCATTTAAAACTATCAATACCATTGCTTCTTTAACAAGTTCT i manLeu1.NW_012106698v1 C 0 I 122 s colAng1.NW_012115433v1 3444556 259 + 6513552 GAA----TATTTTTTT-TTAGTCAGAATTAGATTAATACCTTTCTGTTTACTTTTGTTGAGCTACCAAAGCTTCTGCCACTTTAAGAAAATCAATCACAGCCAATTTATGTCTGGATTTCAGGAAAGCTA-TTGTAAGTATCTAAATTTAGGAAAACAAAAT------------------CATATTATAAGCCAATATTGGT-AAAAATATATTAAATTGCTACAAGCACAATAATACGAAAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCT i colAng1.NW_012115433v1 C 0 I 132 s calJac3.chr13 105219166 277 + 117903854 GAA-----TATTTTTT-CAAGTCAGAATTAGATTAATACATTTCTGTTTACTTTTGTTTAGCTGCCAAAGCTTCTGCCACTTTAAGAAAATCAATTACAGCCAATTTATGTCTGACTTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCATATCACCCTGCTGTTCAAAATTGTAAGCCAATATTGGT-TAAACTATATTAAATTGTTACATGCACAATAATACAAGAACATTTAAAACTATTAATACCATTGCTTTTTTAACAAGTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19410722 265 - 31320352 GAA-----TATTTTTT--GAGTCAGAATTAGATTAATGCATTTCTGATTACTTCTGTTTAGCTGCCAAAGCTTCTGCCACTTTAAGAAAATCAATTACAGCCAATTTATATCTGACTTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCATATCACCCTGCTGTTCAAAATTGTAAGCCAATATTGGT-AAAAATATATTAAATTGTTGC----------ATACAAGAACATTTAAAACTATCAATACCATTGC-TTTTTAACAAGTTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599392 278 + 2203405 GAA-----TATTTTTT-TGAGTAAGGATTAGATTAATACATTTCTGTTTACTTTTGTTTAGCTGCCAAAGCTTCTGCCACTTTAAGAAAATCAATTACAGCCAATTTATGTCTGACTTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCATATCACCCTGCTGTTCAAAACTGTAAGCCAATATTGGTAAAAAATATATTAAATTGTTACATGCACAATAATACAAGAACATTTAAAACTATTAATACCTTTGCTTTTTTAACAAGTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556163 278 - 14941987 GAA-----TATTTTTTTTGAGTCAGAATTAGATTAATACATTTCTGTTTACTTTTGTTTAGTTGCCAAAGCTTCTGCCACTTTAAGAAAATCAATTACAGTCAATTTATGTCTGACTTTCAGGAAAGCTATTTGCAAAAATCTAAATTTAGGAAAACAAAATCATATCACCCTGCTGTTCAAAACTGTAAGCCAATATTGGT-AAAAATATATTAAATTGTTACATGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=488517.000000 s hg38.chr18_GL383571v1_alt 31448 64 + 198278 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACCAAATTTGTTTAGATTTGGATTAA s panTro5.chr18 64987598 64 + 78221452 AGCAAATTTTGATTGACAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACCAAATTTGTTTAGATTTGGATTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110006 64 + 77229886 AGCAAATTTTGATTGACAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACCAAATTTGTTTAGATTTGGATTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329116 64 + 17472758 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACCAAATTTGTTTAGATTTGGATTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139367991 64 - 152096393 AGCAAATTTTGATTGATAATTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACAAAATTTGTTTAGATTTGGATTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320102 136 + 70235451 AGCAAATTTTGATTGATAAGTAATTTTATATTGATAAGCAAATTTTGAT------------------------------------------TGA------------------TAAGTAATTTTATATTGATAAGCAAATTTTGATTGATAAGTAATTTTATATTGAATGGACCAAATTTGTTTAGATTTGGATTAA i rheMac8.chr18 C 0 I 31 s macFas5.chr18 63011489 136 - 75711847 AGCAAATTTTGATTGATAAGTAATTTTATAT-----------------TGATAAGCAAATTTTGATTGATAAGTAATTTTATATTGATAAGCAA-------------------------------------------ATTTTGATTGATAAGTAATTTTATATTGAATGGACCAAATTTGTTTAGATTTGGATTAA i macFas5.chr18 C 0 I 11 s macNem1.NW_012016688v1 13564164 136 - 18804593 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGATAAGCAAATTTTGATTGATAAGTAATTTTATATTGATAAGCAAATTTTGATTGATAAGTAATTTTATATTGAATGGACCAAATTTGTTTAGATTTGGATTAA i macNem1.NW_012016688v1 C 0 I 31 s cerAty1.NW_012001075v1 13181078 64 + 18905526 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACCAAATTTGTTTAGATTTGGATTAA i cerAty1.NW_012001075v1 I 122 C 0 s chlSab2.chr18 60010731 64 - 72318688 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGACCAAATTTGTTTAGATTTGGATTAA i chlSab2.chr18 I 72 I 31 s manLeu1.NW_012106698v1 344837 64 - 1517660 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGAGCAAATTTGTTTAGATTTGGATTAA i manLeu1.NW_012106698v1 I 122 C 0 s colAng1.NW_012115433v1 3444947 64 + 6513552 AGCAAATTTTGATTGATAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGGATCAAATTTGTTTAGATTTGGATTAA i colAng1.NW_012115433v1 I 132 I 31 s calJac3.chr13 105219443 61 + 117903854 GGGACAATT---TTGATAAGGAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGAATCAGATTTATTTAGATTTGGATTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19410987 62 - 31320352 AACACATTTG--TTGTTAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGAATCAGATTTGTTTAGATTTGGATTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599670 62 + 2203405 AGCACATTTT--TTGGTAAGTAATTTTATAT------------------------------------------------------------TGA------------------------------------------------------------------------ATGAATCAGATTTGTTTAGATTTGGATTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556441 62 - 14941987 AGCACATATT--TTGATAAGTAATTTTATAG------------------------------------------------------------TGA------------------------------------------------------------------------ATGAATCAGATTTGTTTAGATTTGGATTAA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=-1741.000000 s hg38.chr18_GL383571v1_alt 31512 8 + 198278 TATACT--AT s panTro5.chr18 64987662 8 + 78221452 TATACT--AT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110070 8 + 77229886 TATACT--AT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329180 8 + 17472758 TATACT--AT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368055 8 - 152096393 TATACT--AT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63011636 8 - 75711847 TAAACAAC-- i macFas5.chr18 I 11 I 12 s cerAty1.NW_012001075v1 13181142 3 + 18905526 ---ACA---- i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 344901 3 - 1517660 ---ACA---- i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105219504 7 + 117903854 TATA-T--AT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411049 8 - 31320352 TATAGT--AT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599732 8 + 2203405 TATAGT--AC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556503 8 - 14941987 TATAGT--AT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I e colAng1.NW_012115433v1 3445011 31 + 6513552 I e chlSab2.chr18 60010795 31 - 72318688 I e macNem1.NW_012016688v1 13564300 31 - 18804593 I e rheMac8.chr18 57320238 31 + 70235451 I a score=682986.000000 s hg38.chr18_GL383571v1_alt 31520 74 + 198278 AGTTGGGATAGACAGATGGAT---AAAAAATACGCCTGACTTATTTTATATGCATTAGCTATTCCAAGAACAAGCAT s panTro5.chr18 64987670 74 + 78221452 AGTTGGGATAGACAGATGGAT---AAAAAATACGCCTGACTTATTTTATATGCATTAGCTATTCCAAGAACAAGCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110078 74 + 77229886 AGTTGGGATAGACAGATGGAT---AAAAAATACGCCTGACTTATTTTATATGCATTAGCTATTCCAAGAACAAGCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329188 73 + 17472758 AGTTGGGATAGACAGATGGAT---AAAAAATATGCCTGAGTTATTTTATATGCATTAGCTATT-CAAGAACAAGCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368063 74 - 152096393 AGTTGGGATAGACAGATGGAT---AAAAAATACGCCTGACTTATTTTATATGCATTAACTATTCCAAGAACAAGCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320269 75 + 70235451 AATTGGGATAGACAGATGGAT--AAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i rheMac8.chr18 I 31 C 0 s macFas5.chr18 63011656 75 - 75711847 AATTGGGATAGACAGATGGAT--AAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i macFas5.chr18 I 12 C 0 s macNem1.NW_012016688v1 13564331 75 - 18804593 AATTGGGATAGACAGATGGAT--AAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i macNem1.NW_012016688v1 I 31 C 0 s cerAty1.NW_012001075v1 13181145 77 + 18905526 AATTGGGATAGACAGATAGATAAAAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60010826 75 - 72318688 AATTGGGATAGACAGATGGAT--AAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i chlSab2.chr18 I 31 C 0 s manLeu1.NW_012106698v1 344904 77 - 1517660 AATTGGGATAGACAGATGGATAAAAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445042 75 + 6513552 AATTGGGATAGACAGATGGAT--AAAAAAATACTCCTGACTTATTTTAGATGCATTAACTATTCCAAGAACAAGCAT i colAng1.NW_012115433v1 I 31 C 0 s calJac3.chr13 105219511 74 + 117903854 GGGTGGGATAGACAGATGGAT---AAAAAATACTCCTGACATATTTGATCTGCATTAAATATTCCCAGAACAAGCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411057 74 - 31320352 GGGTAGGATAGACAGATGGAT---AAAAAATACTCCTGACATATTTCATCTGCGTTAAATATTCCAAGAACAAGCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599740 74 + 2203405 GGGTAGGATAGACAGATGGAT---AAAAAATACTCCTGACATATTTTATCTGCATTAAATATTCCAAGAACAAGCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556511 74 - 14941987 GGGTAGGATAGACAGATGGAT---AAAAAATACTCCAGACATATTTTATCTGCATTAAATATTCCAAGAACAAGCAT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1228663 2134 - 1406956 M e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=537037.000000 s hg38.chr18_GL383571v1_alt 31594 43 + 198278 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG s panTro5.chr18 64987744 43 + 78221452 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110152 43 + 77229886 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329261 43 + 17472758 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368137 43 - 152096393 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320344 43 + 70235451 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63011731 43 - 75711847 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13564406 43 - 18804593 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181222 43 + 18905526 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60010901 43 - 72318688 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 344981 43 - 1517660 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445117 43 + 6513552 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105219585 43 + 117903854 TCTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACAAGACATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411131 43 - 31320352 TTTTGTCTCTTCCTTCCAGGCTATGTCACAGGCACCAGGCATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599814 43 + 2203405 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556585 43 - 14941987 TTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCATACATG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1230874 43 - 1406956 TTTTGTCTCTTCTTTTCAGGCTATGTCGTAGGCACCAGGCATG i proCoq1.NW_012148742v1 M 2134 I 279 e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=2660182.000000 s hg38.chr18_GL383571v1_alt 31637 280 + 198278 AATTTTTAAAATCTAGGTCGGTGGTTAGCAATTGAAGAAACAAAGTATCAGAatattgtaaatatctgaaatgtatatttgaattttctatcctctact-----gacttctatattctaCCTGTCTTCATGTAATATAGAAGATATCAATACCTGTAGGTGGCAGGTAAGACATTGAGTATTTTAAGAAAAGA---TCTTTAAATGATCATTTTGATAATTTGATGGGCACCTCTGGTTAAGCGTAAC----TCTCCAATTCCCAATAGCAGAAACCATTCTAA----------ACC----------------------------------------AAAAG s panTro5.chr18 64987787 285 + 78221452 AATTTTTAAAATCTAGGTCGGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCCATCCTCTACTCTACTGACTTCTATATTCTACCTGTCTTCATGTAATATAGAAGATATCAATACCCATAGGTGGCAGGTAAGACATTGAGTATTTTAAGAAAAGA---TCTTTAAATGATGATTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAAC----TCTCCAATTCCCAATAGCAGAAACCATTCTAA----------ACC----------------------------------------AAAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110195 280 + 77229886 AATTTTTAAAATCTAGGTCGGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCCATCCTCTACT-----GACTTCTATATTCTACCTGTCTTCATGTAATATAGAAGATATCAATACCCATAGGTGGCAGGTAAGACATTGAGTATTTTAAGAAAAGA---TCTTTAAATGATGATTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAAC----TCTCCAATTCCCAATAGCAGAAACCATTCTAA----------ACC----------------------------------------AAAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329304 285 + 17472758 AATTTTTAAAATCTAGGTCGGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCCATCCTCTACTCTACTGACTTCTATATTCTACCTGTCTTCGTGTAATATAGAAGATATCAATACCCATAGGTGGCAGGTAAGACACTGAGTATTTTAAGAAAAGA---TCTTTAAATGATGATTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAAC----TCTCCAATTCCCAATAGCAGAAACCATTCTAA----------ACC----------------------------------------AAAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368180 288 - 152096393 AATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAGTATCTGAAACGTGTATTTGAATTTTCCATCCTCTACTCTACTGACTTCTATATTCTACTTGTTTTCATGTAATATAGAAGATATCAATACCCGTAGGTGGCAGGTAAGACATTGAGTATTTTAAGAAAACATCTTCTTTAAATGATGATTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAAC----TCTCAAATTCCCAATAGCAGAAACCATTCTAA----------ACC----------------------------------------AAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320387 287 + 70235451 AATTTTTAAAATCAAGGTCAGTGGTTAGCAATTGAAGAAATGAAGTATTAGAATATTGCAGATATCTGAAACGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATACAGAGGATATCAATACCCATAGGCAGCAAGTAAGACATTGAGTATTTCAAGAAAACA---TCTTTAAATGATGAGTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAACTCTTTCTCCAATTCCCAATAGTAGAAACCATTCATA----------ACC----------------------------------------AAA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63011774 287 - 75711847 AATTTTTAAAATCAAGGTCAGTGGTTAGCAATTGAAGAAACGAAGTATTAGAATATTGCAGATATCTGAAACGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATATAGACGATATCAATACCCATAGGCAGCAAGTAAGACATTGAGTATTTCAAGAAAACA---TCTTTAAATGATGAGTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAACTCTTTCTCCAATTCCCAATAGTAGAAACCATTCATA----------ACC----------------------------------------AAA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13564449 287 - 18804593 AATTTTTAAAATCAAGGTCAGTGGTTAGCAATTGAAGAAACGAAGTATTAGAATATTGCAGATATCTGAAACGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATATAGACGATATCAATACCCATAGGCAGCAAGTAAGACATTGAGTATTTCAAGAAAACA---TCTTTAAATGATGAGTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAACTCTTTCTCCAATTCCCAATAGTAGAAACCATTCATA----------ACC----------------------------------------AAA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181265 289 + 18905526 AATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGCAAATATCTAAAACGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATATAGACGATATCAATACCCATAGGCAGCAGGTAAGACATTGAGTATTTCAAGAAAACA---TCTTTAAATCATGATTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAACTCTTTCTCCAATTCCCAATAGCAGAAACCATTCTTA----------ACC----------------------------------------AAAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60010944 287 - 72318688 AATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAATGAAGTATCAGAATATTGCAAATATCTGAAATGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATATAGACGATATCAATACCCATAGGCAGCAGGTAAGACATTGAGTATTTCAAGAAAACA---TCTTTAAATGATGAGTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAACTCTTTCTCCAATTCCCAATAGTAGAAACCATTCATA----------ACC----------------------------------------AAA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345024 289 - 1517660 AATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAATAAAGTATCAGAATATTGCAAATATCTAAAACGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATATAGACGATATCAATACCCATAGGCAGCAGGTAAGACATTGAGTATTTCAAGAAAACA---TCTTTAAATCATGATTTTGATAATTTGATGGGCACCTCTGGTTAAGAGTAACTCTTTCTCCAATTCCCAATAGCAGAAACCATTCTTA----------ACC----------------------------------------AAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445160 285 + 6513552 TATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGCAAATATCTGAAACGTATATTTGAATTTTTAATCCTCTACTCTACTGACTTCTATCTTCTACCTGTCTTCATGTAATATAGACGATATCAATACCCATAGGCAGCAGGTAAGACATTGAGTATTTCAAGAAAACG---TCTTTAAATGATGATTTTGATAATTTGATGGGCACCTCTGTTTAAGAGTAAC----TCTCCAATTCCCAATAGCAGAAACCATTCTTA----------ACC----------------------------------------AAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105219628 291 + 117903854 GATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAGTGTATATTTGAATTTTCCATCCTCTACTCTACTGACTTCTATTTTCTACCTGTATTCCTGTAATATGTAAGATATCAG-ACCCATAGATGGCAGGTAAGACACTGAGTATTTTAAGAAAGGATCTTCTTTAAATGATGATTTTGATAATTTGATGTGCACCTCTGGTTAAGAATAATTCTTTCTCCAGTTCCCAATAGCAGAAACCACTATAA----------ACC----------------------------------------AAAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411174 341 - 31320352 AATTTTTAAAATCTAGTTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCCATCCTCTACTCTACTGACTTCTATTTTCTACCTGTATTCATGTAATATGTAAGATATCAG-ACTCATAGATGGTAGGTAAGACACTGAGTATTTTTTTAAAAAATCTTCTTTAAATGATGATTTTGATAATTTGATGTGCACCTCTGGTTAAGAATAATTCTTTCTCCAGTCCCCAATAGCAGAAACCACTATAATTTGATGTGCACCTCTGGTTAAGAATAATTCTTTCTCCAGTCCCCAATAGCAGAAAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1599857 286 + 2203405 AATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCCATC-----CTCTACTGACTTCTATTTTCTACCTGTATTCATGTAATATGTAAGATATCAG-ACCCATAGATGGCAGGTAAGACACTGAGTATTTTAAGAAAACATCTTCTTTAGATTATGATTTTGCTAATTTGATGTGCACCTTTGGTTAAGAATAATTTTTTCTCCAGTTCCCAATAGCAGAAACCACTATAA----------AAC----------------------------------------AAAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556628 291 - 14941987 AATTTTTAAAATCTAGGTCAGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTTCATCCTCTACTCAATTGACTTCTATTTTCTACCTGTATTCATGTAACATGTAAGATATCAG-ACCCATAGATGGCAGGTAAGACACTGAGTATTTTAAGAAAACATCTTCTTTAAATGATGATTATGATAATTTCATGTGCACCTCTGGTTAAGAATAATTCTTTCTCCAGTTCCCAATAGTAGAAACCACTATAA----------ACC----------------------------------------AAAAG i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1230917 279 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=535932.000000 s hg38.chr18_GL383571v1_alt 31917 49 + 198278 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAA s panTro5.chr18 64988072 49 + 78221452 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110475 49 + 77229886 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329589 49 + 17472758 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368468 43 - 152096393 AGGTCCTTCATTCTA------AGTGGTGATAGTCACACTACCAAAGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320674 49 + 70235451 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012061 49 - 75711847 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13564736 49 - 18804593 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181554 49 + 18905526 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011231 49 - 72318688 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345313 49 - 1517660 AGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445445 49 + 6513552 AGGTCCTTCACTCTACCAGCTAGTGGTGATAGTCACACTCCCAAGAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105219919 49 + 117903854 AGGTGTTTCACTCTAACAGCTAGTGGTGATAGTCATACTATCAAGAAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411515 49 - 31320352 ATGTCTTTCATTCTAACAGCTAGTGGTGACAGTCACACTACCAAGAAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600143 49 + 2203405 AGGTCTTTCACTCGAACAGCTAGATGTGATAGTCATACTACCAAGAAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556919 49 - 14941987 AGGTCTTTCACTCTAACAGGTAGTGGTGATAGTCATACTACCAAGAAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1231196 49 - 1406956 AGGTCCTTCACTCTAACAACTGCTGATGATAGTCACACTACCaaaaaaa i proCoq1.NW_012148742v1 I 279 I 273 e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=194118.000000 s hg38.chr18_GL383571v1_alt 31966 18 + 198278 CTGTCCTATGACTTTAAA s panTro5.chr18 64988121 18 + 78221452 CTGTCCTATGACTTTAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110524 18 + 77229886 CTGTCCTATGACTTTAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329638 18 + 17472758 CTGTCCTATGACTTTAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368511 18 - 152096393 CTGTCCCATGACTTTAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320723 18 + 70235451 CTGTCCCATGACTTTAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012110 18 - 75711847 CTGTCCCATGACTTTAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13564785 18 - 18804593 CTGTCCCATGACTTTAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181603 18 + 18905526 CTGTCCCATGACTTTAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011280 18 - 72318688 CTGTCCCATGACTTTAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345362 18 - 1517660 CTGTCCCATGACTTTAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445494 18 + 6513552 CTGTCCCATGACTTTAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105219968 18 + 117903854 CTGTCCCATGACTTTAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411564 18 - 31320352 CTGTCCCATGACTTTAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600192 18 + 2203405 CCGTCCCATGACTTTAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556968 18 - 14941987 CTGTCCCATGACTTTAAA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1231245 273 - 1406956 I e dasNov3.JH575754 449151 3941 - 2150887 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=2122223.000000 s hg38.chr18_GL383571v1_alt 31984 217 + 198278 ACCACCACACGTGGTATAAACTATCCTGGAGTCTGTATCCAAGCAAAATACTTAAACCATGGAGGAAGTAACGTATTTCTCTTTC--CATTTAAGCCATTTGAAATTCCAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TTCATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTG--- s panTro5.chr18 64988139 217 + 78221452 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTATCCAAGCAAAATACTTAAACAAAGGAGGAAGTAACATATTTCTCTTTC--CATTTAAGCCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTT--TGAG----TTTATAAACTCTAGGATTGTTG--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110542 217 + 77229886 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTATCCAAGCAAAATACTTAAACAAAGGAGGAAGTAACATATTTCTCTTTC--CATTTAAGCCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTG--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329656 217 + 17472758 ACCACCACACGTGGCATAAACTATCCTGGAGTCTGTATCCAAGCAAAATACTTAAACAAAGGAGGAAGTAGCGTATTTCTCTTTC--CATTTAAGCCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTG--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368529 213 - 152096393 ACCACCACATGTGGCATAAACTGTCCTGGAGTCTGTATCCAAGCACAATACTTAAA----GGAGGAAGTAACATATTTCTCTTTC--CATTTAAGCCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACAAATTATT-----TACATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTT--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320741 219 + 70235451 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTGTCCAAGCAAAATGCTAAAACAAAGGAGGAAGTAACATGTTTCTCTTTCTACATTTAATTCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAAGATTAGTTTACACTTTAGTGAATGTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTT--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012128 219 - 75711847 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTGTCCAAGCAAAATGCTAAAACAAAGGAGGAAGTAACATGTTTCTCTTTCTACATTTAATTCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAAGATTAGTTTACACTTTAGTGAATGTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTT--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13564803 219 - 18804593 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTGTCCAAGCAAAATGCTAAAACAAAGGAGGAAGTAACATGTTTCTCTTTCTACATTTAATTCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAAGATTAGTTTACACTTTAGTGAATGTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTT--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181621 219 + 18905526 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTGTCCAAGCAAAATGCTAAAACAAAGGAGGAAGTAACATGTTTCTCTTTCTACATTTAGGTCATTTGAAATTCTAATTTAACAG----AAGTATAAATAGAAAAACCAATTATT-----TGCATCAGAAGATTAGTTTATACTTTAGTGAATGTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTT--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011298 219 - 72318688 ACCACCACATGTGGCATAAACTATCCTGGAGTCTATGTCCAAGCAAAATGCCAAAACAAAGGAGGAGGTAACATGTTTCTCTTTCTACATTTAGGTCATTGGAAATTCTAATTTAACAA----AAGTAAAAATAGAAAAACCAATTATT-----TACATCAGAAGATTAGTTTATACTTTAGTGAATGTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGATTGTTT--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345380 219 - 1517660 ACCACCACATGTGGCATAAACTATCCTGGAGTCTGTATCCAAGCAAAATGCTAAAACAAAGGAGGAAGTAACATGTTTCTCTTTCTACATTTAGGTCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TGCATCAGAAGATTAGTTTATACTTTAGTGAATGTATTAAACTATTTT--TGAC----TTTATAAACTCTAGGACTGTTT--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445512 219 + 6513552 ACCACCACATGTGGCATAAACTATCCTAGAGTCTGTATCTGAGCAAAATGCTAAAACAAAGGAGGAAGTAACATGTTTCTCTTTCTACATTTAAGTCATTTGAAATTCTAATTTAACAA----AAGTATAAATAGAAAAACCAATTATT-----TACATCAAAAGATTAGTTTATACTTTAGTGAATGTGTTAAACTATTTT--TGAC----TTTGTAAACTCTAGGATTGTTT--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105219986 229 + 117903854 ACTGCCACATGGGGCATAAACTATACTGGAGGCTGCATCAAAGCAAAATGCTGAAACTAAGGAGGAAGTAACATGTTTCTCTTTC--CATTTAAGCCATTTTAAATTCCAATTTAACAAAAATAAATGTACATTGAAAAAGCAATGATTTATTTTATATTGAAGTATTAGTTTATGCTTTAGTGAATTTATTAAAGTATTTT--TGAC-TATTTTATAAACCCTAGGATTGTTT--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411582 229 - 31320352 ACTGCCACATGTGACATAAACAATACTGGAGTCTGCATCAAAGCAAAATGCTGAAACAAAGGAAGAAGTAACATGTTTCTCTTTC--CATTTAAGCCATTTTAAATTCCAATTTAACAAAAATAAGTATACATTGAAAAAGCAATTATTTATTGTACATCAAAGTATTAGTTTATACTTTAGTGAATTTATTAAAGTATTTT--CGAC-TATTTTATAAACCCCAGGATTGTTT--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600210 223 + 2203405 ACTGCCACATGTGGCATAAACTATACTGGAGTCTGCATCAAAGCAAAATGCTGAAACAAAAGAGGAAGTAACGTGTTTCTCTTTC--CATTTAAGCCATTTTTAATTCTAATTTAACAAAAATAAATATACATTGAAAAAGCAATTATTTATTTTACATCAA------AGTTTATATTTTAGTGAATTTGTTAAAGTATTTT--TGAC-TATTTTATAAACCCTAGGATTGTTT--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3556986 229 - 14941987 ACTGCCACATGTGGCATAAACTATACTGGAGTCTGCATCAAAGCAAAATGCTGAAACAAAGGAGGAAGTAACATGTTTCTCCTTC--CATTTAAGCCATTTTAAATCCTAATTTAACAAAAATAAATATACATTGAAAAAGCAATTATTTATTTTACATCAAAGTATTAGTTTATACTTTAGTGAATTTATTAAAGTATTTT--TGAC-TATTTTATAAACCCTAGGATTGTTT--- i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 453092 228 - 2150887 ACTACCACAAG-GAAATAATCTATTCTGAAGTCTGTACCCAAGCAAAACATTAAAACAAAGGAGGGAATAACAAGTTTCTCTTCT--CATTTGAACTAGTTGAAATTCCAATTTAACTA----AAACTAAAATTGAAAAAGCAATTATTTGT--CATATCAAAGCATCCATTTATCCTTTGGGGAATTAACTTAAATATTTTAATGAAATATTTCATAACCACTAATAGTATTTTTT i dasNov3.JH575754 I 3941 C 0 e proCoq1.NW_012148742v1 1231245 273 - 1406956 I e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=708752.000000 s hg38.chr18_GL383571v1_alt 32201 60 + 198278 AAGCCAAGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGAT--CAGCTGAGTCT s panTro5.chr18 64988356 60 + 78221452 AGGCCAAGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGAT--CAGCTGAGTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110759 60 + 77229886 AGGCCAAGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGAT--CAGCTGAGTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329873 60 + 17472758 AGGCCAAGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGAT--CAGCTGAGTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368742 60 - 152096393 AAGCCAGGTGA-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGAT--CAGCTGAGTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57320960 60 + 70235451 AAGCCAGGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCGGAT--CAGCTGAGACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012347 60 - 75711847 AAGCCAGGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCGGAT--CAGCTGAGACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565022 60 - 18804593 AAGCCAGGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCGGAT--CAGCTGAGACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181840 60 + 18905526 AAGCCAGGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGAT--CAGCTGAGGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011517 59 - 72318688 AAGCCAGATGC-ACCTTTATCAAGGGACTGATCAAGAAAAGATTGC-GAT--CAGCTGAGACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345599 60 - 1517660 AAGCAAGGTGC-ACCTTTATCAAGGGACTGATCAAAAAAAGATTGCGGAT--CAGCTGAGACT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445731 60 + 6513552 AAGCCAGGTGC-ACCTTTATCAAGGGACTGATCAAAATAAGATGGCAGAT--CAGCTGAGACT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105220215 60 + 117903854 AAGCCAAGTGT-ACCTTTATCAAGAGACTGATCAAAATAAGACTGCAGAT--CAGCTGAGTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411811 60 - 31320352 AAGCCAAGTGC-ACCTTTATCAAGAGACTGATCAAAATAAGACTGCAGAT--CAGCTGAGTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600433 60 + 2203405 AAGCCAAGTGC-ACCTTTATCAAGAGACTGATCAAAATGAGACTGCAGAT--CAGCTGAGTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3557215 60 - 14941987 AAGCCAAGTGC-ACCTTTATCAAGAGACTGATCAAAATAAGACTGCAGAT--CAGCTGAATCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1231518 62 - 1406956 AAGCCAAATGC-ACCCTTACCAAGGGACTGATCAAAATAAGATTGCAGACCACAATTGAGTTT i proCoq1.NW_012148742v1 I 273 C 0 s dasNov3.JH575754 453320 60 - 2150887 ---AAAAATGCAATCTTAATTAAGGGACTGATCAAAATAAAATAGTAAATCACAACTGAGTCT i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112275960 4928 - 122678785 I e otoGar3.GL873546 11209212 26 - 20685099 I a score=202554.000000 s hg38.chr18_GL383571v1_alt 32261 15 + 198278 CATTATAATATAAA---------A s panTro5.chr18 64988416 15 + 78221452 CATTATAATATAAA---------A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110819 15 + 77229886 CATTATAATATAAA---------A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329933 15 + 17472758 CATTATAATATAAA---------A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368802 15 - 152096393 CATTATAATATAAA---------T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321020 15 + 70235451 CATTATAATATAAA---------A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012407 15 - 75711847 CATTATAATATAAA---------A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565082 15 - 18804593 CATTATAATATAAA---------A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181900 15 + 18905526 CATTATAATATAAA---------A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011576 15 - 72318688 CATTATAACATAAA---------A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345659 15 - 1517660 CATTATAATATAAA---------A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445791 15 + 6513552 CATTATAATATAAA---------A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105220275 15 + 117903854 CATTATAATATAAA---------A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411871 15 - 31320352 CATTATAATATAAA---------A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600493 15 + 2203405 CATTATAATATAAA---------A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3557275 15 - 14941987 CATTATAATATAAA---------A i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1231580 15 - 1406956 TATTATAATATAAA---------A i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11209238 24 - 20685099 cattgtactatatatatatattta i otoGar3.GL873546 I 26 C 0 s dasNov3.JH575754 453380 15 - 2150887 CATCATAATATAAA---------A i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112275960 4928 - 122678785 I a score=496089.000000 s hg38.chr18_GL383571v1_alt 32276 37 + 198278 -------GATATTCTC----------------------CAAATTTT------TATTACTGAGTTTTAGTAAA s panTro5.chr18 64988431 37 + 78221452 -------GATATTCTC----------------------CAAATTTT------TATTACTGAGTTTTAGTAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110834 37 + 77229886 -------GATATTCTC----------------------CAAATTTT------TATTACTGAGTTTTAGTAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329948 37 + 17472758 -------GATATTCTC----------------------CAAATTTT------TATTACTGAGTTTTAGTAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368817 37 - 152096393 -------GATATTCTC----------------------CAAATTTT------TATTACTGAGTTTTAGTAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321035 43 + 70235451 -------GATACTCTC----------------------CAAATTTTAAAATACATTACTGAGTTTTATTAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012422 43 - 75711847 -------GATACTCTC----------------------CAAATTTTAAAATACATTACTGAGTTTTATTAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565097 43 - 18804593 -------GATACTCTC----------------------CAAATTTTAAAATACATTACTGAGTTTTATTAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181915 43 + 18905526 -------GATACTCTC----------------------CAAATTTTAAAATACATTACTGAATTTTATTAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011591 43 - 72318688 -------GATACTCTC----------------------CAAATTTTAAAACACATTACTGAATTTTATTAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345674 43 - 1517660 -------GATACTCTC----------------------CAAATTTTAAAATACATTACTGAGTTTTATTAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445806 43 + 6513552 -------GATACTCTC----------------------CAAATTTTAAAATACATTACTGAGTTTTATTAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105220290 43 + 117903854 -------GATTTTCTC----------------------CAAATTTTAAAATACATTACTGAGTTTTATTAAA i calJac3.chr13 C 0 I 1109 s saiBol1.JH378121 19411886 43 - 31320352 -------GATTTTCTC----------------------CAAATTTTAAAATATATTACTGAGTTTTACTAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600508 43 + 2203405 -------GATTTTCTC----------------------CAAATTTTAAAATATATTACTGAGTTTTATTAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3557290 43 - 14941987 -------GATTTCCTC----------------------CAAATTTTAAAATATATTACTGAGTTTTATTAAA i aotNan1.NW_018502140v1 C 0 I 1100 s proCoq1.NW_012148742v1 1231595 43 - 1406956 -------GATATCCTT----------------------CAAATTTTAAAATATATTACTGAGTTTCATTAAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11209262 43 - 20685099 -------aatatCTTA----------------------CAAATTTTAAAATATATTACTTAGTTTAATTAAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 10397892 43 + 122678785 -------GGCATACTT----------------------CAAATTTTAAAATATATTACTGAGTTTTATTAAA i canFam3.chr1 n 4928 C 0 s dasNov3.JH575754 453395 70 - 2150887 GAGAGAAAATATCCTCATAATCACAATTAAACATGCATCATAATTTAATACAAATTACAGA--TCCACGAAA i dasNov3.JH575754 C 0 C 0 a score=16511.000000 s hg38.chr18_GL383571v1_alt 32313 1 + 198278 G s panTro5.chr18 64988468 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110871 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329985 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368854 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321078 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012465 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565140 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181958 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011634 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345717 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445849 1 + 6513552 G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105221442 1 + 117903854 G i calJac3.chr13 I 1109 C 0 s saiBol1.JH378121 19411929 1 - 31320352 G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1600551 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 I 1060 s aotNan1.NW_018502140v1 3558433 1 - 14941987 G i aotNan1.NW_018502140v1 I 1100 C 0 s proCoq1.NW_012148742v1 1231638 1 - 1406956 G i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11209305 1 - 20685099 G i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 10397935 1 + 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 453465 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 a score=99505.000000 s hg38.chr18_GL383571v1_alt 32314 7 + 198278 GACAAAA---- s panTro5.chr18 64988469 7 + 78221452 GACAAAA---- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110872 7 + 77229886 GACAAAA---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329986 7 + 17472758 GATAAAA---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368855 7 - 152096393 GACAAAA---- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321079 7 + 70235451 GACAAAA---- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012466 7 - 75711847 GACAAAA---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565141 7 - 18804593 GACAAAA---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181959 7 + 18905526 GACAAAA---- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011635 7 - 72318688 GACAAAA---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345718 7 - 1517660 GACAAAA---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445850 7 + 6513552 GACAAAA---- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105221443 7 + 117903854 GACAAAA---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19411930 7 - 31320352 AACAAAA---- i saiBol1.JH378121 C 0 I 919 s cebCap1.NW_016107689v1 1601612 7 + 2203405 GACAAAG---- i cebCap1.NW_016107689v1 I 1060 C 0 s aotNan1.NW_018502140v1 3558434 7 - 14941987 GACAAAA---- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1231639 7 - 1406956 GAAAAAA---- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11209306 7 - 20685099 GAGAAAA---- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 10397936 7 + 122678785 GACAAAA---- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 453466 11 - 2150887 GACAAAATAAA i dasNov3.JH575754 C 0 C 0 a score=287240.000000 s hg38.chr18_GL383571v1_alt 32321 22 + 198278 TAATTTGC-AAACTATAGCAAAC s panTro5.chr18 64988476 22 + 78221452 TAATTTGC-AAACTATAGCAAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110879 22 + 77229886 TAATTTGC-AAACTATAGCAAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5329993 22 + 17472758 TAATTTGC-AAACTATAGCAAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368862 22 - 152096393 TAATTTGC-AAACTATAGCAAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321086 22 + 70235451 TAATTTGC-AAACTATAGCAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012473 22 - 75711847 TAATTTGC-AAACTATAGCAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565148 22 - 18804593 TAATTTGC-AAACTATAGCAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181966 22 + 18905526 TAATTTGC-AAACTATAGCAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011642 22 - 72318688 TAATTTGC-AAACTATAGCAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345725 22 - 1517660 TAATTTGC-AAACTACAGCAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445857 23 + 6513552 TAATTTGCAAAACTATAGCAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105221450 22 + 117903854 TAATTTTC-AAACTCTATCAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19412856 22 - 31320352 TAATTTTC-AAACTATATCAAAT i saiBol1.JH378121 I 919 C 0 s cebCap1.NW_016107689v1 1601619 22 + 2203405 TAATTTTC-AAACTATATCAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3558441 22 - 14941987 TAATTTTC-AAACTATATCATGT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1231646 22 - 1406956 TTAACTGC-AAACCATACCAAAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11209313 22 - 20685099 TAAATTGC-AAACTCTACCAAAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 10397943 22 + 122678785 TAAATCGC-AAACCATATCAAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 453477 22 - 2150887 TAAATTAC-AAACTATATCAAAT i dasNov3.JH575754 C 0 I 3136 a score=4579568.000000 s hg38.chr18_GL383571v1_alt 32343 330 + 198278 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGATAATGGTTTCTAAGCCCCTATATCTAAGCTGCTCTTATATCCATGAAGCCCTATAGTCGATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCGTAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTTCCTGTAATAAAATA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAT s panTro5.chr18 64988498 330 + 78221452 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGATAATGGTTTCTAAGCCCCTGTATCTAAGCTGCTCTTATATCCATGAAGCCCTATAGTCGATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCGTAATTGATAACATTGAAATGGTGACCACTG-TGTTCCCCCAAAGCTCTTTCTTATAATAAAATA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64110901 330 + 77229886 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGATAATGGTTTCTAAGCCCCTGTATCTAAGCTGCTCTTATATCCATGAAGCCCTATAGTCGATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCGTAATTGATAACATTGAAATGGTGGCCACTG-TGTTCCCCCAAAGCTCTTTCTTATAATAAAATA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330015 330 + 17472758 ATATTTGAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGATAATGGTTTCTAAGCCCCTGTATCTAAGCTGCTCTTATATCCATGAAGCCCTATAGTCGATGTCACAATTCAACTTTTAACATTCATTGATGGCTATAAAAGCGTAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTTCCTGTAATAAAATA------TATCAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139368884 330 - 152096393 ATATTTAAAGATATTTTCCATAGAATAAAAAGAGACACAATCTCTGTAACATTTCTTTAACCTCTAACTGATAGGTAATCACAGTGGAGATAATGGTTTCTAAGCCCCTGTATTTAAGCTGCTCATATATCCATGAAGCCCTATAGTCAATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTTCTCCAAAGCTCTTTCTTGTAATAAAATA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321108 330 + 70235451 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACTATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGCCCCCATATCTAAGCTGCTCATCTATCCATGAAGCCCTATAGTCAATGTCACAATTCAACTTTTAATATTAATTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTCCCTGTAATAAAACA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAAGTTAACACTGCCTAGA--------------------------------------------------AAAAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63012495 330 - 75711847 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACTATTTCTGTAACATTTCTCTAACCTCTAATTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGCCCCCATATCTAAGCTGCTCATCTATCCATGAAGCCCTATAGTCAATGTCACAATTCAACTTTTAATATTAATTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTCCCTGTAATAAAACA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAAGTTAACACTGCCTAGA--------------------------------------------------AAAAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565170 330 - 18804593 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACTATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGCCCCCATATCTAAGCTGCTCATCTATCCATGAAGCCCTATAGTCAATGTCACAATTCAACTTTTAATATTAATTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTCCCTGTAATAAAACA------TATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAAGTTAACACTGCCTAGA--------------------------------------------------AAAAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13181988 330 + 18905526 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGATACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGCCCCCATATCTAAGTTGCTTATATATCCATGAAGCCCTATAGTCAATGTCACAATTCAACTTTAAACATTCATTGATGGTCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTTCCTGTAATAAAACA------TATAAAAGGAAATTATCGTAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60011664 330 - 72318688 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGCCCCCGTATCTAAGCTGCTCATATATCCAGGAAGCCCTATAGTCAATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAAGCTCTTTCCTGTAATAAAACA------TATAAAAGGAAATTATCGTAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 345747 330 - 1517660 ATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTAAACCTCTAATTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGCCCCCATATCTAAGCTGCTCATATATCCATGGAGCCCTATAGGCAATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGACCACTG-TGTTCCTCCAAATCTCTTTCCTGTAATAAAACA------TATAAAAGGAAATTATCGTAGTTTATTAGCAATCATTTTTCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3445880 330 + 6513552 ATGTTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTTTAACATTTCTTTAACCTCTAACTGATAGGTAATCACAATGGAGTCAAAGGGTTCTAAGTCCCCGTATCTAAGCTGCTCATATATCCATGAAGCCCTATAGTCAATGTCACAATTCAACTTTTAACATTCCTTGATGGCCATAAAAGCATAATTGATAACATTGAAATGGTGGCCACTG-TGTTCCTTCAAAGCTCTTTCCTGTAATAAAACA------TATAAAAGGAAATTATCGTAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGA--------------------------------------------------AAAAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105221472 324 + 117903854 ATATTTATAGGCATTTTCCATAGAATAAAAAGAGACACAATTTCTCTAACATTTCTTTAACCTCTAATTGATAGGTAATCATAGTGGAGACAATGGTTTCTAAGCCCCTGTATCTAAGCTGCTCATATATCCATGAAGCCCTATAGTTGATGTCACAATTCAACTTTTAACATTCATT----GCCATAAATGAATAATTGATAACATTGAAATGGTGACCATTG-TGTTCCTCCAAAGCTCTTTCCTGTAATAAAGCA------TG--AAAGGAAATTATCGTAGTTTATTAGCAATCATTTTCCACTTTAAACGTTTAACACTGCCTAGA--------------------------------------------------GGAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19412878 324 - 31320352 ATATTTATAGGCATTTTCCATAGAATAAAAAGAGACACAATTTCTCTAACGTTTCTTTAACCTCTAATTGATAGGTAATCACAATGTAGACAATGGTTTCTAAGCCCTTGTATCTAAACTGCTCATATATCCATGAAGCCCTATAGTTGATGTCAGAATTCAACTTTTAACATTCATT----GCCATAAATGAATAATTGATAACATTGAAATGGTGACCATTG-TGTTCCTCCAAAGCTCTTCCCTGTAATAAAGCA------TA--AAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAGTTTAACATTGCCTAGA--------------------------------------------------GGAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1601641 324 + 2203405 ATATTTATAGGCATTTTCCATAGAATAAAAAGAGACATAATTTCTCTAACGTTTCTTTAACCTCTAATTGATAGGTAAGCACAATGGAGACAATGGTTTCTAAGTCCCTGTATCTAAGCTGGTCATATATCCATGAAGCCCTATAGTTGATGTCACAATTCAACTTTTAACATTCATT----GCCATAAATGAATAATTGATGACACTGAAATGGAGACAACTG-TGTTCCTCCAAAGCTGTTTCCTGTAATAAAGCA------TA--AAAGGAAATTATCGTAGTTTATTAGCAATCATTTTCCACTTTAAAAGTTTAACACTGCCTAGA--------------------------------------------------GGAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3558463 324 - 14941987 ATATTTATAGGCATTTTCCATAGAATAAAAAGAGACACAATTTCTCTAACACTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGACAATGGTTTCTAAGCCCCTGTATCTAAGCTGCTCATATATCCATGAAGCCCTATAGTTGATGTCACAATTCAACTTTTAACATTCATT----GCCATAAATGAATAATTGATAACATTGAAATGGTGACCATTG-TGTTCCTCCAAAGCTCTTTCCTGTAATAAAGCA------TA--AAAGGAAATTGTCGTAGTTTATTAGCAATCATTTTCCACTTTAAATGTTTAACACTGCCTAGA--------------------------------------------------GGAAAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1231668 337 - 1406956 ATTTTTAAAGGCATTTTCCATAGAAGGAAAAGAAACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGATAATCACGATGGAGCTGATGGTTTCTAAGCCCCTATGTCTAAGCTTCTCACATGTCCACGAAGCCCTACAGTGAATGTCACAATTCAACCTGTAACATTCATTGATGGCCATAAACGTATAATTGATACCACTGAAATGGTGACCATTTCTGTTTCTCCAAAGCTCTTTCCTAGAATAAAACAGGAAAGGATAGCAGGATATTATTATAGTTTATTAGCAATCATTTTGCACTTTAAAAGTTTAACAATGTCTAGA--------------------------------------------------GGAAAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11209335 330 - 20685099 ATTTTAAAAGTCTTTTTCCACAGGAGAAAAGGAGACACCGTTTCTGTAACATTTCTTTAACCTCTGATAGGTAAGTGGTCGTGATGGAGCCCATTGTTTCTGAGCCCC-AGATCTAAGCTTCTCCCATGTCCATGAAGCCCTACAGTAAATGTCACCATTCTACTTTTAACATTCATCGATGGTCATAAATGCATAATAGACGCCATGGAAATGGTGACCATTTCTGCTCCTCCAAAGCCCTTTCCTGTAATAAAATA------TATAGAAGGATATTATTATGGTTTATTAGCAACCGCTTTACACCTTAAAAGTTTAACAATGTCTGGA--------------------------------------------------GGAAAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 10397965 327 + 122678785 ATATTTAAAGGCATTTTCCATAGAAGAAAAAGAGAAACAATCTCTTTTACATTTCTTTAACCTTTATTTTATAGGTAATCATGTTGCAGTCAGTGGTTTCTGAGCCTTTATATCTGAGCTGCTCATATTTCCATGAAGCCCTACAGTGAATGTCACAATTCAATTTTTAACATGCATTGATGGTCATGAATGTATAATTGATACCATTGAAATGGTGACCCTTC-TGCTCCTTCAAAGCTCTTTCTTGTTATAAAACA------TGTAGAAGGA---TATTATAGTTTATTAGCGATCATTTTCTACTTTAAAAATTTAACACTATCTAGA--------------------------------------------------GGAAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 456635 368 - 2150887 ATTTTAAAACACATTACCTATAGATGAAAAAGAAACACAAATTCTTCTACATTTCTTTAACCTGTAAATGGTAGTTAATCATAATGCAGTTGATTG-TTCTAATCTCCCAACTCTAAACTGCTCATGTTTCCATGAAGCCCTACAGTGAATATCATAATCCAAC-------ATTCATGGACGGTCATAAATGCATAAT-AATTCCAATGAAACAGTGACCATTC-TGTTCCTTCAAGGCTCTTTCATGTTACAGAACA------TAT---AGGAGATTGTTATAGTTTGTTAGGAACCATTTTCCATTCTCAAAGTTGAACACTATCTAGAGcaggaggtcttaacattttttgttacacagacccctttgctagtcaggtgaaaat i dasNov3.JH575754 I 3136 I 154 a score=1248375.000000 s hg38.chr18_GL383571v1_alt 32673 84 + 198278 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAT--AAA- s panTro5.chr18 64988828 84 + 78221452 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATTATAATTCCC-TTTT-----CTATACAT--AAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111231 84 + 77229886 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATTATAATTCCC-TTTT-----CTATACAT--AAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330345 84 + 17472758 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAT--AAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369214 86 - 152096393 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTATTTCATGATAATTCCC-TTTT-----CTATACATAAAAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321438 84 + 70235451 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAACGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAt--aaa- i rheMac8.chr18 C 0 I 96 s macFas5.chr18 63012825 84 - 75711847 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAt--aaa- i macFas5.chr18 C 0 I 46 s macNem1.NW_012016688v1 13565500 84 - 18804593 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAt--aaa- i macNem1.NW_012016688v1 C 0 I 96 s cerAty1.NW_012001075v1 13182318 84 + 18905526 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAt--aaa- i cerAty1.NW_012001075v1 C 0 I 96 s chlSab2.chr18 60011994 84 - 72318688 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAt--aaa- i chlSab2.chr18 C 0 I 96 s manLeu1.NW_012106698v1 346077 84 - 1517660 TTCACATTAAACTAGCCCCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TGTT-----CTATACAt--aaa- i manLeu1.NW_012106698v1 C 0 I 96 s colAng1.NW_012115433v1 3446210 84 + 6513552 TTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAt--aaa- i colAng1.NW_012115433v1 C 0 I 96 s calJac3.chr13 105221796 84 + 117903854 TTCATATTAAACTAGCACCTGTGAAATTTTTCCATAAGGATAACTAAATATCCTTTTATAATAATTCCC-TTTT-----CTATACAT--AAA- i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19413202 84 - 31320352 TTCATATTAAACTAGCACCTGTGAAATTTTTCCATAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAG--AAA- i saiBol1.JH378121 C 0 I 1 s cebCap1.NW_016107689v1 1601965 84 + 2203405 TTCATATTAAACTAGCACCTGTGAAATTTTTCCATAAGGATAACTAAATTTTCTTTCATGATAATTCCC-TTTT-----CTATACAG--AAA- i cebCap1.NW_016107689v1 C 0 I 1 s aotNan1.NW_018502140v1 3558787 84 - 14941987 TTCATATTAAACTAGCACCGGTGAAATTTTTCCATAAGGATAACTAAATATTCTTTCATGATAATTCCC-TTTT-----CTATACAT--AAA- i aotNan1.NW_018502140v1 C 0 I 1 s proCoq1.NW_012148742v1 1232005 85 - 1406956 TTCACGTTAAACTAGCACCTGTGAAATCCTTCCACAAGGATAACTAAATTTTCTTTTATTATAATTCCCTTTTT-----CTATGCAT--AAA- i proCoq1.NW_012148742v1 C 0 I 1 s otoGar3.GL873546 11209665 85 - 20685099 TTCATGTTAAACTAGCACCTGTGAAATCCTTCCACAAGGATAACTAAATTTTCTTTTATTGTAATTCCCTTTTT-----ATATGCAT--AAC- i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 10398292 89 + 122678785 TTCATGTGAAACTAGTAGCAGTGAAATCCTTCCACAAGGATAACTAAACTTTCTTTCATTATAATTGCC-TTTTATTTCCTACGCTT--AAA- i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 457157 83 - 2150887 TTCATGTTAAACTGGCACCAATG-AATTCTTCCTCAAGGATAACTAAATTGT-TTTCATTACAATTTCT-TTAT-----CCACACAT--AAAA i dasNov3.JH575754 I 154 C 0 a score=50723.000000 s hg38.chr18_GL383571v1_alt 32757 8 + 198278 ATAATGAT s panTro5.chr18 64988912 8 + 78221452 ATAATGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111315 8 + 77229886 ATAATGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330429 8 + 17472758 ATAATGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369300 8 - 152096393 ATAATGAT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63012955 8 - 75711847 atcatgga i macFas5.chr18 I 46 I 42 s calJac3.chr13 105221881 8 + 117903854 ATAATGGT i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19413287 8 - 31320352 ATGATGAT i saiBol1.JH378121 I 1 C 0 s cebCap1.NW_016107689v1 1602050 8 + 2203405 ATAATGAT i cebCap1.NW_016107689v1 I 1 C 0 s aotNan1.NW_018502140v1 3558872 8 - 14941987 ATAATGAT i aotNan1.NW_018502140v1 I 1 C 0 s proCoq1.NW_012148742v1 1232091 8 - 1406956 ATAATGAT i proCoq1.NW_012148742v1 I 1 C 0 s otoGar3.GL873546 11209751 8 - 20685099 ATAACGAT i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 10398382 8 + 122678785 ATCATGAT i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 457240 8 - 2150887 ATAATTAT i dasNov3.JH575754 C 0 C 0 e colAng1.NW_012115433v1 3446294 96 + 6513552 I e manLeu1.NW_012106698v1 346161 96 - 1517660 I e chlSab2.chr18 60012078 96 - 72318688 I e cerAty1.NW_012001075v1 13182402 96 + 18905526 I e macNem1.NW_012016688v1 13565584 96 - 18804593 I e rheMac8.chr18 57321522 96 + 70235451 I a score=1779944.000000 s hg38.chr18_GL383571v1_alt 32765 127 + 198278 CAGCAAACCATATACCAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT s panTro5.chr18 64988920 127 + 78221452 CAGCAAACCATATGCCAGGAGAAAACTTTAACATGCTTTTAAAGAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111323 127 + 77229886 CAGCAAACCATATGCCAGGAGAAAACTTTAACATGCTTTTAAAGAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330437 127 + 17472758 CAGCAAACCATATACCAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGATATTTTGACT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369308 126 - 152096393 CAGCAAACCATATGCCAGGAG-AAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATATAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321618 127 + 70235451 CAGTAAACCATATACTAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATGTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i rheMac8.chr18 I 96 C 0 s macFas5.chr18 63013005 127 - 75711847 CAGTAAACCATATACTAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATGTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i macFas5.chr18 I 42 C 0 s macNem1.NW_012016688v1 13565680 127 - 18804593 CAGTAAACCATATACTAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATGTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i macNem1.NW_012016688v1 I 96 C 0 s cerAty1.NW_012001075v1 13182498 127 + 18905526 CAGTAAACCATATACTAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATGTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i cerAty1.NW_012001075v1 I 96 C 0 s chlSab2.chr18 60012174 127 - 72318688 CAGTAAACCATATACTAGCAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTGTTTAAACTAGCCAATGTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i chlSab2.chr18 I 96 C 0 s manLeu1.NW_012106698v1 346257 127 - 1517660 CAGTAAACCATATACTAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATGTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i manLeu1.NW_012106698v1 I 96 C 0 s colAng1.NW_012115433v1 3446390 127 + 6513552 CAGTAAACCATATACCAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAGTTTAACAGAAAGTAATGAAACTATTTTCT--TTGTCCACTGACATTTTGACT i colAng1.NW_012115433v1 I 96 C 0 s calJac3.chr13 105221889 127 + 117903854 CAGCAAACCATATACCAGGAAAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCT--ATGTCCACTGACATTTTGACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413295 127 - 31320352 CATCAAACCATACACCAGGAGAAAACTTTAACATGCTTTTAACCAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCT--TTGTTCATTGACATTTTGACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602058 127 + 2203405 CAGCAAACCATACACCAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCCATTTAACAGAAAGTAATGAAACCATTTTCT--TTGTCCACTGACATTTTGACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3558880 127 - 14941987 CAGCAAATCATATACCAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAATATTTAAACTAGCCAATTTAATAGAAAGTAATGAAACCATTTTCT--TTGTCCATTAACATTTTGACT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1232099 127 - 1406956 CAGCAAACTATATGCCAGGAAAAAACTTTAGCATGCTTTTAAACAGCATCTGCTACTTAAGTATCTAAACTACCAAATTTTATAGGAAGTAATGAAAGCATTTTTT--TGGTCCCCTGACATTCTGACT i proCoq1.NW_012148742v1 C 0 I 169 s otoGar3.GL873546 11209759 128 - 20685099 TAGCTAGCTACATG-CGGGACAAACCTTTAGCGTGCTTTTAAACAGCATCTGCTATTTAAGTGTTTGAACTACCAGATTTTATAGAAAGTAATAAAACCATTTTTTCCCCCTCCACTGACATTTGGACT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 10398390 125 + 122678785 CAGCAAAC--TATACCAGGAGAAAACTTTAGCATACATTAAAATAGCATCTGCCATTTAAGTATTTAAACTATCAAATTTGATAGGAAGTAATTAAACAATTTTCT--TTTCCCAGTGACATTTTGGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 457248 91 - 2150887 GAGCAAACTATAT--CAGGAGAAAGCTTTAGTATGCTTTTAAATAGAATCTAGTCTTTAAGTAT----------AAATTTGATAAAACATA--------------T------------AAATTCTGATT i dasNov3.JH575754 C 0 C 0 a score=112312.000000 s hg38.chr18_GL383571v1_alt 32892 21 + 198278 -CTACATAAAAGTAACACTGGT s panTro5.chr18 64989047 21 + 78221452 -CTACATAAAAGTAACACTGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111450 21 + 77229886 -CTACATAAAAGTAACACTGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330564 21 + 17472758 -CTACATAAAAGTAACACTGGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369434 21 - 152096393 -CTACATAAAAGTAACACTGGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321745 15 + 70235451 -CTACATAAA------AGTGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013132 15 - 75711847 -CTACATAAA------AGTGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565807 15 - 18804593 -CTACATAAA------AGTGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182625 15 + 18905526 -CTACATAAA------AGTGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012301 15 - 72318688 -CTACATAAA------AGTGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346384 15 - 1517660 -CTACATAAA------AGTGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446517 21 + 6513552 -CTACATAAAAGTAACAGTGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222016 21 + 117903854 -GTACATAAAAGTAATACTGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413422 21 - 31320352 -GTACATAATAGTAACACTGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602185 21 + 2203405 -GTACATAAAAGTAACACTGGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3559007 21 - 14941987 -GTACATAAAAGTAACACTGAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11209887 18 - 20685099 ----CTAGAAAGTAAAACTTGT i otoGar3.GL873546 C 0 I 101 s canFam3.chr1 10398515 15 + 122678785 -CTCTGTAAA------AGTTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 457339 22 - 2150887 CTTATATGAAAGCAAGAAATGT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1232226 169 - 1406956 I a score=456792.000000 s hg38.chr18_GL383571v1_alt 32913 51 + 198278 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT---TTTTTTTTTTTACAAAACTAA s panTro5.chr18 64989068 51 + 78221452 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT---TATTTTTTTTTACAAAACCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111471 51 + 77229886 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT---TATTTTTTTTTACAAAACCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330585 54 + 17472758 AGACTCTTACTTGTGACCTAC---------------ttcatttatttatttttttttttaCAAAACCAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369455 47 - 152096393 AGAGTCTTACTTGTGACCTAC---------------TTCACTTAT-------TTTTTTTACAAAACCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321760 47 + 70235451 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT-------GTTTTTTACAAAACCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013147 47 - 75711847 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT-------GTTTTTTACAAAACCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565822 47 - 18804593 AGACTCTTACTTGTGAACTAC---------------TTCATTTAT-------GTTTTTTACAAAACCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182640 47 + 18905526 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT-------GTTTTTCACAAAACCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012316 45 - 72318688 --ACTCTTACTTGTGACCTAC---------------TTCATTTAT-------GTTTTTTACAAAACCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346399 47 - 1517660 AGACTCTTACTTGTGACCTAC---------------TTCATTTAT-------GTTTTTTACAAAACCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446538 47 + 6513552 AGACTCTTACTTGTGACCTAC---------------TTTATTTAT-------GTTTTTTACAAAACTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222037 46 + 117903854 GGACTCTTACTTTTGACCTAC---------------TTCATTTAT--------TTTTTTACAAAATCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413443 46 - 31320352 GGACTCTTACTTTTGATCTAC---------------TTCATTTGT--------TTTTTTACAAAATCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602206 46 + 2203405 GGACTCTTACTTTTGACCTAC---------------TTCATTTAT--------TTTTTTACAAAATCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3559028 46 - 14941987 GGACTCTTACTTTTGACCTAC---------------TTCATTTAT--------TCTTTTACAAAATCAA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 10398530 44 + 122678785 ACATTCTTCCTTGTGAG-GAC---------------TTCATTTTG---------TTCCCACAAAAACAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 457361 66 - 2150887 GCACTGTTACCTGTGACCAGCTTAGTTTTTCTGTTGTTCATTTGT---TTGTTTTTGTTTTAATACAAA i dasNov3.JH575754 C 0 I 67 e proCoq1.NW_012148742v1 1232226 169 - 1406956 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=10424.000000 s hg38.chr18_GL383571v1_alt 32964 1 + 198278 T s panTro5.chr18 64989119 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111522 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330639 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369502 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321807 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013194 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565869 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182687 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012361 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346446 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446585 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222083 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413489 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602252 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3559074 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 10398574 1 + 122678785 C i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1232226 169 - 1406956 I e dasNov3.JH575754 457427 67 - 2150887 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=791976.000000 s hg38.chr18_GL383571v1_alt 32965 70 + 198278 CTTTAAAAGTCTATCGTGCAAGGCCACAGGCAAGATTTTATGAGGTAAGTAAGAAACCCACATGGATAAT- s panTro5.chr18 64989120 70 + 78221452 CTTTAAAAGTCTATCGTGCAAGGCCACAGGCAAGATTTTATGCGGTAAGTAAGAAACCCACATGGATAAT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111523 70 + 77229886 CTTTAAAAGTCTATCGTGCAAGGCCACAGGCAAGATTTTATGCGGTAAGTAAGAAACCCACATGGATAAT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330640 70 + 17472758 CTTTAAAAGTCTATCGTGCAAGGCCACAGGCAAGATTTTATGCGGTAAGTAAGAAACCCACATGGATAAT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369503 70 - 152096393 CTTTAAAAGTCTATCGTGCAAGGCCACAGTCAAGATTTTATGGGGTAAGTAAGAAACCCACATGGATAAT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321808 70 + 70235451 CTATAAAAGTCTATCATGCAAAGCCGCAGGCAAGATTTTATGGGGTAAGTAAGAAACCCACATGGATAAT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013195 70 - 75711847 CTATAAAAGTCTATCATGCAAAGCCGCAGGCAAGATTTTATGGGGTAAGTAAGAAACCCACATGGATAAT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565870 70 - 18804593 CTATAAAAGTCTATCATGCAAAGCCGCAGGCAAGATTTTATGGGGTAAGTAAGAAACCCACATGGATAAT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182688 70 + 18905526 CTATAAAAGTCTATCATGCAAAGCCGCAGGCAAGATTTTATAGGGTAAGTAAGAAACCCACATGGATAAT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012362 70 - 72318688 CTATAAAAGTCTATCATGCAAAGCCGCAGGCAAGATTTTATGGGGTAAGTAAGAAACCCACATGGATAAT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346447 70 - 1517660 CTATAAAAGTCTATCATGCAAAGCCGCAGGCAAGATTTTATGGGGTAAGTAAGAAACCCACATGGATAAT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446586 70 + 6513552 CTATAAAAGTCTGTCGTGCAAAGCTGCAGGCAAGATTTTATGCGATAAGTAAGAAACCCACATGGATAAT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222084 70 + 117903854 CTTTAAAAGTCTATAGTGCAAGGCCTCAGGCAAGATTTTATGTGGTGAGTAAGAAACTCACATAGATAAT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413490 66 - 31320352 CTTTAAAAGTCTGTAGTGCAAGGTCATAGGCAAGATTTTATGTG----GTAAGAAACTCACATGGGTAAT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602253 70 + 2203405 CTTTAAAAGTCTATAGTACAAGGCCACAGGCAAGATTTTATGTGGTGAGTAAGAAATCCACATGGATAAT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3559075 70 - 14941987 CTTTAAAAGTCCATAGTGCAAGGCCACAGGCAAGATTTTATGTGGTGAGTAAGAAACCCACATAGATAAT- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1232395 70 - 1406956 CTTTACAAGTCTATAGTGCAAGGCCAGTGGCAAGATTTTATATGGTAAGTAAGGAACCCTCATGGACAAT- i proCoq1.NW_012148742v1 I 169 I 19 s canFam3.chr1 10398575 69 + 122678785 TTTAAAAAGTCTA--ACACAAGGCCAGAGGCAAAGTTTTATTTGGTAACTTAGGAGTCCACCTAGATAAGG i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 457427 67 - 2150887 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=115815.000000 s hg38.chr18_GL383571v1_alt 33035 12 + 198278 ATTATTTAACAA------- s panTro5.chr18 64989190 12 + 78221452 ATTATTTAACAA------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111593 12 + 77229886 ATTATTTAACAA------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330710 12 + 17472758 ATTATTTAACAA------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369573 12 - 152096393 ATTATTTAACAA------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321878 12 + 70235451 ATTATTTAACAA------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013265 12 - 75711847 ATTATTTAACAA------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565940 12 - 18804593 ATTATTTAACAA------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182758 12 + 18905526 ATTATTTAACAA------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012432 12 - 72318688 ATTATTTAACAA------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346517 12 - 1517660 ATTATTTAACAA------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446656 12 + 6513552 ATTATTTAACAA------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222154 12 + 117903854 ATTATTTAATAG------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413556 12 - 31320352 ATTATTTAACAG------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602323 12 + 2203405 ATTATTTAACAG------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3559145 12 - 14941987 ATTATTTAATAG------- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 10398644 19 + 122678785 GTTATAAAAAGAATAAGAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1232465 19 - 1406956 I e dasNov3.JH575754 457427 67 - 2150887 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=1850952.000000 s hg38.chr18_GL383571v1_alt 33047 164 + 198278 AAATCCATTTTAGGA-AAATAATTGGCTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGGCTTGTACCTACTGTAAATACAACCTCTGATATGTGATGCCGAGTTTCCACAGCCTAATCCCTCAGAATC s panTro5.chr18 64989202 164 + 78221452 AAATCCATTTTAGGA-AAATAATTGGCTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGGCCTGTACCTACTGTAAATACAACCTCTGATATGTGATACCGAGTTTCCACAGCCTAATCCCTCAGAATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111605 164 + 77229886 AAATCCATTTTAGGA-AAATAATTGGCTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGGCCTGTACCTACTGTAAATACAACCTCTGATATGTGATACCGAGTTTCCACAGCCTAATCCCTCAGAATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330722 164 + 17472758 AAATCCATTTTAGGA-CAATAATTGGCTTCTGTGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGGCCTGTGCCTACTGTAAATACAACCTCTGATATGTGATGCTGAGTTTCCACAGCCTAATCCCTCAGAATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369585 164 - 152096393 AAATCCGTTTTAGGA-AAATAATTGGCTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGTCTAAGCAGGCCTGTACCTACTGTAAATACAAACTCTGATATGTGATGCCGAGTTTCCACAGCCTAATCCCTCAGAATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57321890 164 + 70235451 AAATCCATTTTAGGA-AAATAGTTGACTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTGTACGTACTGTATATACAACCTCTGATATGTGATGCCAGGTTTCCACAGCCTAAGCACTCAGAATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013277 164 - 75711847 AAATCCATTTTAGGA-AAATAGTTGACTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTGTACGTACTGTATATACAACCTCTGATATGTGATGCCGGGTTTCCACAGCCTAAGCACTCAGAATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13565952 164 - 18804593 AAATCCATTTTAGGA-AAATAGTTGACTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTGTACGTACTGTATATACAACCTCTGATATGTGATGCCGGGTTTCCACAGCCTAAGCACTCAGAATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182770 164 + 18905526 AAATCCATTTTAGGA-AAATAGTTGACTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTCTACATACTGTATATACAACCTCTGATATGTGATGCCGGGTTTCCACAGCCTAAGCACTCAGAATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012444 163 - 72318688 AAATCCATTTTAGGA-AAATAG-TGACTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTCTACATACTATATATATAACCTCTGATATGTGATGCCAGGTTTCCACAGCCTAAGCACTCAGAATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346529 164 - 1517660 AAATCCATTTTAGGA-AAATAGTTGACTTCTATGAAGAATCT-GTGTCAATCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTCTACGTACTGTATATACAACCTCTGATATGTGATGCCAGGTTTCCACAGCCTAAGCGCTCAGAATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446668 164 + 6513552 AAATCCATTTTAGGA-AAATAGTTGACTTCTACGAAGAATCT-GTGTCAGTCAAACAGGCTACAGTACACAGCCA-TTTGCTCTGA----------------------------AGGCTAAGCAGACCTCTACGTACTGTATATACAACCTCTAATATGTGATGCCGGGTTTCCACAGCGTAAGCGCTCAGAATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222166 165 + 117903854 AAATCCATTTTAGGA-AAATAATTGACTTCTATGAAGAATTT-GTGTCAATCAAACAGGCTACAGTACACAGCCATTTTGCTCTGA----------------------------AGGCTAAGCAGAACTCTATGTACTGTAAATACAATCTCTGATATGTGACGCAGGCTTTCCACAGCCTAAGTCCTCAGAATC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413568 165 - 31320352 AAATCCATTTTAGGA-AAATAATTGACTTCTATGAAGAATTT-GTGTCAATCAAACAGGCTACAATACACAGCCATTTTGCTCTTA----------------------------AGGCTAAGCAGGACTCTATGTACTGTAAATACTATCTCTGATATGTGATGCAGGCTTTCCACAGCCTAAGTCCTCAGAATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602335 165 + 2203405 AAATCCATTTTAGGA-AAATAATTGACTTCTATGAAGAATTT-GTGTCAATCAAACAGGCTACAGTACACAGCCATTTTGCTCTTA----------------------------AGGCTAAGCAAAACTCTATGTACTGTAAATACTATCTCTGATATGTGATGCAGGCTTTCCACAGCCTAAGTCCTCAGAATC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3559157 165 - 14941987 AAATCCATTTTAGGA-AAATAATTGACTTCTATGAAGAATTT-GTATCAATCAAACAGGCTACAGTACACAGCCATTTTGCTCTGA----------------------------AGGCTAAGCAGAACTCTATGTACTGTAAATACAATCTCTGATATGTGATGCAGGCTTTCCACAGCCTAAGtcctcagaatc i aotNan1.NW_018502140v1 C 0 I 2014 s proCoq1.NW_012148742v1 1232484 163 - 1406956 AAATACATTTTAAGG-AAATAATTGACTTCTGTGAAGAGCCT-GTGTCAATTAAACAAGCTACAGGACATAGCCA-TTTGCTCTGA----------------------------TGGATAAACAGA-TTCCATTTACTACAAACACAGACTATGATACGTGATGCAGAGTTTCTACCATCTAAGCCATCCGAGTC i proCoq1.NW_012148742v1 I 19 C 0 s canFam3.chr1 10398663 188 + 122678785 AAATCCATTTTAGGGCAAATAATGGACTT---TGAAGAATCTCATATCGATC-CGCAGGCTTCAGGACACAGCCA-GGTGCTCTGATGAGTTAAAAGATCTGGTAGGTAATTAGAAGTTAAG-GGATTTCCATTTACTAAAAATATAGTCTTTGATATG-GATGGAAGATTTCTATATCCTAAGTCCCTAGAATC i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 457427 67 - 2150887 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=478394.000000 s hg38.chr18_GL383571v1_alt 33211 48 + 198278 AGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA s panTro5.chr18 64989366 48 + 78221452 AGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111769 48 + 77229886 AGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330886 48 + 17472758 AGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369749 48 - 152096393 AGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322054 48 + 70235451 AGATCACAACCATAGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013441 48 - 75711847 AGATCACAACCATAGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566116 48 - 18804593 AGATCACAACCATAGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182934 48 + 18905526 AGATCACAACCATAGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012607 48 - 72318688 AGATCAGAACCATAGAGCTCTCTCACTGTGAGCTCTAATATA---CTAACG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346693 48 - 1517660 AGATCAGAACCATAGAGCTCTCTCGCTGTGAGCTCTAATATA---CTAACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446832 48 + 6513552 AGATCAGAACCATAGAGCTCTCTTGCTGTGAGCTCTAATATA---CTAACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222331 48 + 117903854 GGTTAAGAACCACGGAGCTCTCTCCCTGTGAGTTCTGATATA---CTAACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413733 48 - 31320352 GGTTGAGAACCACAGAGCTCTCTCCCTGTGAGCTCTGATACA---CTAACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602500 48 + 2203405 GGTTAAGAACCATGGAGCTCTCTTCCTGTGAGCTCTGATATA---TTAACA i cebCap1.NW_016107689v1 C 0 C 0 s proCoq1.NW_012148742v1 1232647 48 - 1406956 AGATCAGGTCCATGGAGCACTCTCTCTGTGAGCCCTAACATA---CTAACA i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 10398851 51 + 122678785 AGATCTGGTCTACGGAGCACTCGATCTATGAGTGttaatatatttttaaaa i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 457427 67 - 2150887 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=188459.000000 s hg38.chr18_GL383571v1_alt 33259 17 + 198278 ATTTTTA--GAAAAACAAA s panTro5.chr18 64989414 17 + 78221452 ATTTTTA--GAAAAACAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111817 17 + 77229886 ATTTTTA--GAAAAACAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330934 17 + 17472758 ATTTTTA--GAAAAACAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369797 17 - 152096393 ATTTTTA--GAAAAACACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322102 17 + 70235451 ATTTTTA--GAAAAACAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013489 17 - 75711847 ATTTTTA--GAAAAACAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566164 17 - 18804593 ATTTTTA--GAAAAACAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182982 17 + 18905526 ATTTTTA--GAAAAACAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012655 17 - 72318688 ATTTTTA--GAAAAACAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346741 17 - 1517660 AGTTTTA--GAAAAACAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446880 17 + 6513552 ATTTTTA--GAAAAACAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222379 17 + 117903854 ATTTTTA--GAAGAACAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413781 17 - 31320352 AATTTTA--GAAGAACAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602548 17 + 2203405 ATTTTTA--GAAGAACAAA i cebCap1.NW_016107689v1 C 0 C 0 s proCoq1.NW_012148742v1 1232695 17 - 1406956 CGGTTTA--GAAAAGCAAA i proCoq1.NW_012148742v1 C 0 I 306 s canFam3.chr1 10398902 15 + 122678785 a--ttta--GAAAAACAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 457494 19 - 2150887 ACTTTTAATGAAAAACAAG i dasNov3.JH575754 I 67 C 0 e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=61145.000000 s hg38.chr18_GL383571v1_alt 33276 5 + 198278 TTTCT s panTro5.chr18 64989431 5 + 78221452 TTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111834 5 + 77229886 TTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330951 5 + 17472758 TTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369814 5 - 152096393 TTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322119 5 + 70235451 TTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013506 5 - 75711847 TTTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566181 5 - 18804593 TTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13182999 5 + 18905526 TTTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012672 5 - 72318688 TTTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346758 5 - 1517660 TTTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446897 5 + 6513552 TTTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222396 5 + 117903854 TTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413798 5 - 31320352 TTTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602565 5 + 2203405 TTCCT i cebCap1.NW_016107689v1 C 0 C 0 s proCoq1.NW_012148742v1 1233018 5 - 1406956 TTTCT i proCoq1.NW_012148742v1 I 306 C 0 s canFam3.chr1 10398917 4 + 122678785 -CTCT i canFam3.chr1 C 0 n 0 s dasNov3.JH575754 457513 5 - 2150887 TCCCT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=474452.000000 s hg38.chr18_GL383571v1_alt 33281 44 + 198278 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT s panTro5.chr18 64989436 44 + 78221452 GCCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111839 44 + 77229886 GCCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5330956 44 + 17472758 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369819 44 - 152096393 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322124 44 + 70235451 ACCTCTTAGTCTCTAACAGTGTTCTAGGCAATAAAGAAAGATCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013511 44 - 75711847 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566186 44 - 18804593 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183004 44 + 18905526 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012677 44 - 72318688 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346763 44 - 1517660 ACCTCTTAGTCTCTAACATTGTTCTAGGTAATAAAGAAAGATCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446902 44 + 6513552 ACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222401 44 + 117903854 ACCTCTTAGTCTCCAAGATTGTTCTAGGCAATAAAGAAAGATCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413803 44 - 31320352 ACCTCTTAGTCTCTAAGATTGTTCTAGGCAATAAATAAAGATCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602570 44 + 2203405 ACCTCTTAGTCTCTAAGATTGTTCTAGGCAATAAATAAAGGTCT i cebCap1.NW_016107689v1 C 0 C 0 s proCoq1.NW_012148742v1 1233023 44 - 1406956 ACCTCTTAGCCTCTAAGATGGTTCTAGACAATGAAGGAGGATCT i proCoq1.NW_012148742v1 C 0 I 28 s dasNov3.JH575754 457518 43 - 2150887 TCTTCACAGTCCCTGAAATAGTTCTCGAC-GTGAAAAATAATCT i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=39498.000000 s hg38.chr18_GL383571v1_alt 33325 4 + 198278 TGGT s panTro5.chr18 64989480 4 + 78221452 TGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111883 4 + 77229886 TGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331000 4 + 17472758 TGGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369863 4 - 152096393 TGGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322168 4 + 70235451 TGGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013555 4 - 75711847 TGGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566230 4 - 18804593 TGGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183048 4 + 18905526 TGGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012721 4 - 72318688 TGGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346807 4 - 1517660 TGGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446946 4 + 6513552 TGGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222445 4 + 117903854 TGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413847 4 - 31320352 TGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602614 4 + 2203405 TGAT i cebCap1.NW_016107689v1 C 0 C 0 s dasNov3.JH575754 457561 4 - 2150887 TGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1233067 28 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=733046.000000 s hg38.chr18_GL383571v1_alt 33329 80 + 198278 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TATAGGTGACTAAGGCCT-GGGAC--ACATGGTAGGTTATTAATGTGGAATGATC s panTro5.chr18 64989484 80 + 78221452 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TATAGGTGACTAAGGCCT-GGGAC--ACATGGTAGGTTATTAATGTGGAATGATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111887 80 + 77229886 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TATAGGTGACTAAGGCCT-GGGAC--ACATGGTAGGTTATTAATGTGGAATGATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331004 80 + 17472758 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TATAGGTGACTAAGGCCT-GGGAC--ACATGGTAGGTTATTAATGTGGAATGATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369867 73 - 152096393 -----------------------------TTTTCTTTTTCAATGCTTGAGAC-AGGGG-----TATAGGT-------GTCT-GGGAC--ACATGGTAGGTTATTAATGTGGAATGATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322172 80 + 70235451 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TACAGGTGACTAAGGCCT-GGGAC--ACATAGTAGGTTATTAATGTGGAATGATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013559 80 - 75711847 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TACAGGTGACTAAGGCCT-GGGAC--ACATAGTAGGTTATTAATGTGGAATGATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566234 80 - 18804593 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TACAGGTGACTAAGGCCT-GGGAC--ACATAGTAGGTTATTAATGTGGAATGATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183052 80 + 18905526 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----CACAGGTGACTAAGGCCT-GGGAC--ACATAGTAGGTAATTAATGTGGAATGATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012725 80 - 72318688 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TACAGGTGACTAAGGCCT-GGGGC--ACATAGTAGGTTATTAATGTGGAATGATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346811 80 - 1517660 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TACAGGTGACTAAGGCCT-GGGAC--ACATAGTAGGTTATTAATGTGGAATGATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3446950 70 + 6513552 -----------------------------TTTTCTTTTTCAATGCTTGAGAT-AGGGG-----TATAGGTGACTAAGGCCT-GGGAC--AC----------ATTAATGTGAAATGATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222449 79 + 117903854 -----------------------------TTTTCTTTTTAAATGCTTGAGAT-GGGGG-----TTTAGGAGATTAAGGCCT-ACGGT---TATGATAGGTTATTAATGTGGAATGACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413851 80 - 31320352 -----------------------------TTTTCTTTTTAAATGCTTGAGAT-AGGGG-----TATAGGGGATTAAGGTCT-AAGAC--AAATGATACGTTATTAATGTGAAATGATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602618 80 + 2203405 -----------------------------TTTTCTTTTTAAATGCTTGAGAT-AGGGG-----TATAGGGGATTAAGTTCT-AAGAC--ACATGATAAGTTATTAATGTGGAATGATT i cebCap1.NW_016107689v1 C 0 C 0 s proCoq1.NW_012148742v1 1233095 82 - 1406956 -----------------------------TTTTCCTTTTAAATGCTTGAGATAAGGGG-----TGTAGGCGATTAAGTCATGGGGAC--ACGTGGTAGGTTATTCATGTTGAATGATC i proCoq1.NW_012148742v1 I 28 I 132 s dasNov3.JH575754 457565 116 - 2150887 TGATTTTTCTACTCATTCATTTTATACCCTTTTCCTTTCAAGTGCTTGGGAT-AGGGGAGAGAAATTAGAGAACAAGTAAA-AGTATCTGCTTGGTAGGCCCTTAATGCAGAAAAATA i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=296888.000000 s hg38.chr18_GL383571v1_alt 33409 32 + 198278 AGTCACTTATTTTAAAGATAATTACGTATTTT s panTro5.chr18 64989564 32 + 78221452 AGTCACTTATTTTAAAGATAATTACGTATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111967 32 + 77229886 AGTCACTTATTTTAAAGATAATTACGTATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331084 32 + 17472758 AGTCACTTATTTTAAAGATAATTATGTATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369940 32 - 152096393 AGTCACTTATTTTAAAGATAATTATGTATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322252 32 + 70235451 AGTTACTTATTTTAAAGATAATTATGTATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013639 32 - 75711847 AGTCACTTATTTTAAAGATAATTATGTATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566314 32 - 18804593 AGTCACTTATTTTAAAGATAATTATGTATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183132 32 + 18905526 AGTCACTTATTTTAAAGATAATTATGTATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012805 32 - 72318688 AGTCACTTATTTTAAAGATAATTATGTATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346891 32 - 1517660 AGTCACTTATTTTAAAGATAATTATGTATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447020 32 + 6513552 AGTCACTTATTTTAGAGATAATTATGTATTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222528 32 + 117903854 GGTCACTTACTTTAAAGataattatatatttt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413931 32 - 31320352 GGTCACTTACTTTAAAGataattatatatttt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602698 32 + 2203405 GTTCACTTACTTTAAAGATAATTACATATTTT i cebCap1.NW_016107689v1 C 0 C 0 s dasNov3.JH575754 457681 32 - 2150887 AGCATTTTATTTTAAAGATTTTGTTTGATTCT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=2536072.000000 s hg38.chr18_GL383571v1_alt 33441 307 + 198278 AAAAATCAggccgggcatggtggctcactcctgtaaccccagcactttgggaggccaaggctggtctatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-catctctactg---aaaaaaaaacaaaaattagctgggtgtggtggtgcatgcctgtaatcctagctacctaggaggctgaggcaggagaatcgcttccacctggaaagc--agaggttgcagtgagccgaga--ttgtgccatggcactccagcctgggcaacagag-caagactccatctcaaaaaaacaaacaa s panTro5.chr18 64989596 307 + 78221452 AAAAATCAggccgggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccggtctatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc-catctctactg---aaaaaaaagcaaaaattagctgggtgtggtggtgcatgcctgtaatcctagctacctaggaggctgaggcaggagaatcgcttgcacctggaaagc--agaggttgcagcgagccgaga--ttgtgccacggcactccagcctgggcaacagag-caagactccatctcaaaaaaacaaacaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64111999 307 + 77229886 AAAAATCAggccgggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccggtctatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc-catctctactg---aaaaaaaagcaaaaattagctgggtgtggtggtgcatgcctgtaatcctagctacctaggaggctgaggcaggagaatcgcttgcacctggaaagc--agaggttgcagcgagccgaga--ttgtgctacggcactccagcctgggcaacagag-caagactccatctcaaaaaaacaaacaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331116 310 + 17472758 AAAAATCAggccaggcatggtggctcactcctgtaaccccagcactttgggagaccaaggccggtctatcacctgtggtcaggagtttgagaccagcatggccaacatggtgaaaccc-catctctactgaaaaaaaaaaaacaaaaattagctgggtgtggtggtgcatgcctgtaatcctagctacctaggaggctgaggcaggagaaccgcttgcacctggaaagc--agaggttgcagtgagccgaga--ttgtgccacggcactccagcctgggcaacagag-caagactccatctcaaaaaaacaaacaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139369972 311 - 152096393 AAAAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggcctgttgatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaactc-catctctactaaaaaaaaaaaaacaaaaattagctgggtgtggtggtgcacgcctgtaatcctagctacctaggaggctgaggcaggagaatcgcttgcacctggaaggc--agaggttgcagtgagctgaga--tcgtgccactgcactgcagcctggacaacagagccaagactccgtctcaaaaaaacaaacaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322284 304 + 70235451 GAAAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccagtgggtcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-cacctctacta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgcaactggaaggc--agaagttgcagtgagctgaga--tcgtgccactgcactccagcctgggcaacagag-caagactccacctcaaaaacacaaatga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013671 304 - 75711847 GAAAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccagtgggtcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-cacctctacta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgcaactggaaggc--agaagttgcagtgagctgaga--tcgtgccactgcactccagcctgggcaacagag-caagactccacctcaaaaacacaaatga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566346 304 - 18804593 GAAAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccagtgggtcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-cacctgtacta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgcaactggaaggc--agaagttgcagtgagctgaga--tcgtgccactgcactccagcctgggcaacagag-caagactccacctcaaaaacacaaatga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183164 304 + 18905526 GAAAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccagtgggtcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-cacctctacta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcgtgaggctgaggcaagagaatcgcttgcaactggaaggc--agaagttgcagtgagctgaga--tcatgccactgcactccagcctgggcaacagag-caagactccaactcaaaaacacaaatga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60012837 304 - 72318688 GAAAATTAggccaggtatggtggctcactcctgtaaccccagcactttgggaggccaaggccagtcggtcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-cacctctatta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcatgaggctgaggcaggagaatcgcttgcaactggaaggc--agaagttgcagtgagctgaga--tcgtgccactgcactccagcctgggcaacagag-caagactccacctcaaaaacacaaatga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 346923 294 - 1517660 GAAAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccagt----------gggtcaggagtttgagaccagcctggccaacatggtgaaaacc-cacctctacta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcgtgaggctgaggcaggagaatcgcttgcaactggaaggc--agaagttgcagtgagctgaga--tcgtgccactgcactccagcctgggcaacagag-caagactccacctcaaaaacacaaatga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447052 304 + 6513552 GAGAATTAggccaggcatggtggctcactcctgtaaccccagcactttgggaggccaaggccggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaacc-catctctacta------aaaatacaaaaattagctgggtgtggtggtgcctgcctgtaattccagctactcaggaggctgaggcaggagaatcacttgcaactggaaggc--agaagttgcagtgagctgaga--tcgtgccactgcactccagcctgggcaacagag-caagactccacctcaaaaacacaaatga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222560 305 + 117903854 aaaaattaggccaggcgtgggggctcactcctgtaatcctagcacttcgggaggccaaggctggtggatcacctgaggtcaggagtttgagaccagcctggccaacatagtgaaaccc-cacgtctacta------aaaatataaaaattagctggacatggtggtgcacacctgtaatcccggctactcaggagactgaggcaggagaattgcttgaacccggaaggt---gaagtttcagtgagccgagagttggtgccactgcactccagcctgggcgacagag-caagactccgtctcaataaaacaaacaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19413963 309 - 31320352 aaaaattaggccaggcttgggggctcactcctataatcctagcacttcaggaggccaaggctggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaacccgcccccctacta------aaaatataaaaattagctggacatggtggtacacacctataatcccggctactcaggagactgaggcaggagaactgcttgaacccggaaggcgaagaaggttcagtgagccgagagttggtgccactacactccagcctgggcgacagag-caagactccatctcaataaaacaaacaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1602730 308 + 2203405 AAAAATTAggccaggcttgggggctcattcctgtaatcctagcactttgggaggccaaggctggcggatcaccggaggtcaggagtttgagaccagcctggccaacatggtgaaaccc-cacctctacaa------aaaatataaaaattagctgggcatggtggtgcacacctgtaatcccggctactccggagactgaggcaggagaattgcttgaacccagaaggcgaagaaggttcagtgagccgagagttggtgccactgcactccagcctgggtgacagag-caagactccgtctcaataaaacaaacaa i cebCap1.NW_016107689v1 C 0 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e dasNov3.JH575754 457713 0 - 2150887 C e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=688478.000000 s hg38.chr18_GL383571v1_alt 33748 75 + 198278 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCACTTTT---TTCTTCTTAC s panTro5.chr18 64989903 75 + 78221452 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTT---TTCTTCTTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64112306 75 + 77229886 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----CACTATAAATGTATCAGGTCCCCTTTT---TTCTTCTTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331426 75 + 17472758 aaaaaTTGATACTCATTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTT---TTCTTCTTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139370283 75 - 152096393 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTT---TTCTTCTTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322588 78 + 70235451 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATTAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63013975 78 - 75711847 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566650 78 - 18804593 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183468 78 + 18905526 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013141 78 - 72318688 aaaaaTTGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347217 78 - 1517660 aaaaaTTGATACTCATTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447356 78 + 6513552 aaaaaTGGATACTCGTTCATAAGTCCTTTCCTCCATGA----TACTATAAATGTATCAGGTCCCCTTTTTTCTTCTTCTTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222865 78 + 117903854 aaaaaTTAATATGCATTCCTAAGTCCTTTCCTCCATGA----AACTCTAAATGTATCAGGTCCCTTTCTTTCTTCTTATTAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19414272 78 - 31320352 aaaaaTTAATATGCATGCATAAGTCCTTTCCTCCATCA----CACTCTAAATATATCAGGTCCCTTTCTTTCTTCTTATTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603038 78 + 2203405 aaaaaTTAATACGCATTCCTAAGTCCTTTCCTCCATGA----AACTCTAAATAGTTCAGGTCCCTTTCTTTCTTTTTATTAC i cebCap1.NW_016107689v1 C 0 C 0 s dasNov3.JH575754 457713 81 - 2150887 AAAAATTGCAACTCATTCACAGATCCTTTCTTCAGTGATACTTACTGTAAATGGGCCAGGTCCCTTTTT-TCCATTCCTTAC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e aotNan1.NW_018502140v1 3559322 2014 - 14941987 I a score=89964.000000 s hg38.chr18_GL383571v1_alt 33823 8 + 198278 TTTAGGTG s panTro5.chr18 64989978 8 + 78221452 TTTAGGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64112381 8 + 77229886 TTTAGGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331501 8 + 17472758 TTTAGGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139370358 8 - 152096393 TTTAGGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322666 8 + 70235451 TTTAGGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014053 8 - 75711847 TTTAGGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566728 8 - 18804593 TTTAGGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183546 8 + 18905526 TTTAGGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013219 8 - 72318688 TTTAGGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347295 8 - 1517660 TTTAGGTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447434 8 + 6513552 TTTAGTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105222943 8 + 117903854 TTTAGGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19414350 8 - 31320352 TTTAGGTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603116 8 + 2203405 TTTAGGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3561336 8 - 14941987 TTTAGGTG i aotNan1.NW_018502140v1 I 2014 C 0 s dasNov3.JH575754 457794 8 - 2150887 CTCAACTG i dasNov3.JH575754 C 0 I 1 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=393000.000000 s hg38.chr18_GL383571v1_alt 33831 42 + 198278 ATCCtgtggcaggccaggtctcactaacagctgaacaggcag s panTro5.chr18 64989986 42 + 78221452 ATCCtgtggcaggccaggtctcactaacagctgaacaggcag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64112389 42 + 77229886 ATCCtgtggcaggccaggtctcactaacagctgaacaggcag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331509 42 + 17472758 ATCCtgtggcaggccaggtctcactaacagctgaacaggcag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139370366 42 - 152096393 ATCCtgtggcaggccaggtctcactaacagctgaacagggag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322674 42 + 70235451 ATCCtgtggcgggccaagtctcactaagagctgaacagacag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014061 42 - 75711847 ATCCtgtggcgggccaagtctcactaagagctgaacagacag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566736 42 - 18804593 ATCCtgtggcaggccaagtctcactaagagctgaacagacag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183554 42 + 18905526 ATCCtgtggcgggccaagtctcactaagagctgaacagacag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013227 42 - 72318688 ATCCtgtggcgggccaagtctcactaagagctgaacagacag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347303 42 - 1517660 ATCCtgtggtgggccaagtctcactaagagctgaacagacag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447442 42 + 6513552 ATCCtgtggcgggccacgtctcactaagagctgaacagacag i colAng1.NW_012115433v1 C 0 I 3 s calJac3.chr13 105222951 42 + 117903854 ATACtatggcaggccagggttcactaggagttgaacaggcag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19414358 42 - 31320352 ATTCtatggcaggccagggttcacgaagagctgaacaggcag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603124 42 + 2203405 ATTCtatggcaggccagggttcactcagacctgaacaggcag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3561344 42 - 14941987 ATTCtatagcaggtcagggttcactaagagctgaacaggcag i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e dasNov3.JH575754 457802 1 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=1145635.000000 s hg38.chr18_GL383571v1_alt 33873 129 + 198278 gcctccatggcaactgtttcagca----ctgagtagttaagttta-------------atagagccagtgtcctcatacgtaggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttggagcatg s panTro5.chr18 64990028 129 + 78221452 gcctccatgacaactgtttcagca----ctgagtagttaagttta-------------atagagccagtgtcctcatacgtaggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttggagcata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64112431 129 + 77229886 gcctccatgacaactgtttcagca----ctgagtagttaagttta-------------atagagccagtgtcctcatacgtaggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttggagcata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331551 129 + 17472758 gcctccatgacaactgtttcagca----ctgagtagttaagttta-------------atagagccagtgtcctcatacgtaggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttggagcatg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139370408 129 - 152096393 gcctccatgacaactgtttcagca----ctgagtagttaggttta-------------atagagccagtgtcctcatacataggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttgaagcatg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322716 142 + 70235451 gcctccgtgacaaccgtttcagca----ctgagtagttaaatttaatactaaaagctgatagagccagtgccctcatacataggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttgaagcatg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014103 142 - 75711847 gcctccgtgacaaccgtttcagca----ctgagtagttaaatttaatactaaaagctgatagagccagtgccctcatacataggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttgaagcatg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566778 142 - 18804593 gcctccgtgacaaccgtttcagca----ctgagtagttaaatttaatactaaaagctgatagagccagtgccctcatacataggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttgaagcatg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183596 142 + 18905526 gcctccatgacaactgttccagca----ctgagtagttaaatttaatactaaaagctgatagagccagtgccctcatacataggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgagccttgaagcatg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013269 142 - 72318688 gcctccgtgaaagccgtttcagca----ctgagtagttaaatttaatactaaaagctgatagagccagtgccctcatacataggctggaatgaaacaaaatcccaccaatagttttgcctagtcctttcttgggccttgaagcatg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347345 142 - 1517660 gcctccatgacaactgtttcagca----ctgagtagttaaatttaatactaaaagctgatagagccagtgccctcatacataggctggaatgcaacaaaatcccaccaatagttttgcctagtcctttcttgggccttgaagcatg i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105222993 146 + 117903854 gcttccatgacaactgtttcagcactgtctgagtagttaagttaaatattaaaaggtgatagagctagtgcactcatacataggctggaatgcaacaaaatcccaccaagagttttgcctagggctttcttgggccttgaagagtg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19414400 146 - 31320352 gattccatgacaactgtttcagcactgactgagtagttaagttaaatattaaaagctgacagagctagtgctttcatacataggctgaaatgcaacaaaatcccaccgagagttttgcctaggcctttcttgggccttgaagcctg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603166 146 + 2203405 gcttccatgacaattgtttcagcactgactgagtagttaagttaaatattaaaagctgatagagctagtgccctcatacataggctgaaatgcaacaaaatcccatcaagcgttttgcctaggcctttcttgagccttgaagcatg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3561386 146 - 14941987 gcttccatgacaactgtttcagcactgactgagtagttaagttaaatattaaaaggtgatagagctagtgccctcatacataggctggaatgcaacaaaatcccaccaagagttttgcctaggcctttcttgggtcttgaagcatg i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e dasNov3.JH575754 457802 1 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e colAng1.NW_012115433v1 3447484 3 + 6513552 I a score=4622368.000000 s hg38.chr18_GL383571v1_alt 34002 482 + 198278 acaagataacgaaggaattcttaacaggacccctttacaattaaatatgttttattgggggcctgaaggacctccccagactgccacaagcaagctttactggggactaaaggaactccccaaacctccatgatttagtaggagacaagataagggtaatctctgtggtacctggacccatttagattaagtaaatttactcaggctccagaggaaggtcttcaagactcagatcttagttatagattagaagttaatcacttatgtctttagatgaatgcacacttacatgtagacatatagcttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctatacccggttacagaaataaactctgttctttcccagttcatcttcatctcgttattgggccacaaaaat-atgcagcctgacccttggtttggtccgagaacaA s panTro5.chr18 64990157 481 + 78221452 acaagataaagaaggaattcttaacaggacccctttacaattaaatatgttttattgggggcctgaaggacctctccagactgccacaagcaagctttactggggactaaaggaactccccaaacctccatgatttagtaggagacaagataagggtaatctctgtggtacctggacccatttagattaagtaaatttactgaggctccagaggaaggtcttcaagactcagatcttagttatagattagaagttaatcacttatgtctttagatg-atgcacacttacatgtagacatatagcttagaagttatataagctctgcaaaactttgtaattttgagttgatctggtgatatttccccagccttcttcctgtacctcgttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacaaaaat-atgcagcctgacccttggtttggtctgagaacaA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64112560 481 + 77229886 acaagataacgaaggaattcttaacaggacccctttacaattaaatatgttttattgggggcctgaaggacctctccagactgccacaagcaagctttactggggactaaaggaactccccaaacctccatgatttagtaggagacaagataagggtaatctctgtggtacctggacccatttagattaagtaaatttactgaggctccagaggaaggtcttcaagactcagatcttagttatagattagaagttaatcacttatgtctttagatg-atgcacacttacatgtagacatatagcttagaagttatataagctctgcaaaactttgtaattttgagttgatctggtgatatttccccagccttcttcctgtacctcattacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacaaaaat-atgcagcctgacccttggtttggtccgagaacaA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5331680 482 + 17472758 acaagataacgaaggaattcttaacaggacccctccacaattaaatatgttttattgggggcctgaaggacatccccagactgccacaagcaagctttactggggactaaaggaactccccaaacctccatgatttagtaggagacaagataagggtaatctctgtggtacctggacccatttagattaggtaaatttactcaggctccagaggaaggtcttcaagacttagatcttagttatagattagaagttaatcacttatgtctttagatgaatgcacacttacatgtagatatatagcttagaagttatataagctctgcaaaactttgtaattttgagtcggtctggtgatatttccccagcctccttcctgtaccccgttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacaaaaat-atgcagcctgacccttggtttggtccgagaacaA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139370537 479 - 152096393 acaagataacaaaggaattcttaacaggatgcttttacaattaaacatgttttattgggggcctga---acctccccagactgccacaaacaagctttactggggactaaaggaactccccaaacctccatgatttagtaggagacaagataagggtaatctctctggtacctggacctatttagattaagtaaatttactcagtctccagaggaaggtcttcaagactcagatcttagttatagattagaagttaatcacttatgtctttaaatgaatgcacacttacttgtagacagatagcttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctgtacccggttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacaaaaat-atgcagcctgacccttggtttggtccgagaacaA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57322858 479 + 70235451 acaagataatgaaggcattcttaacaggacccctttacagttaaacatgttttaccgggggcctgaaggacctccccagactgccacaaataagctttactggggactgaaggaactcgtcaaa-ctccatgatttagtaggagacaagttaagggtaatctgtctggtacctggacccatttagattaagtaaatttgctgaggctccagaggaaggtcttcaggactcagatcttagttacagattagaagttaatcacttctgtctttagatgaatgcacacttacactcagacagatagtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctgtacccggttacagaa--aaactctcttctttcccagttcatctgcatcttgttattgggccacaaaaat-atgcagcctgacccttggtttggtccaagaacaA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014245 479 - 75711847 acaagataatgaaggcattcttaacaggacccctttacagttaaacatgttttaccgggggcctgaaggacctccccagactgccacaaataagctttactggggactaaaggaactcgtcaaa-ctccatgatttagtaggagagaagttaagggtaatctgtctggtacctggacccatttagattaagtaaatttgctgaggctccagaggaaggtcttcaggactcagatcttagttacagattagaagttaatcacttctgtctttagatgaatgcacacttacactcagacagatagtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctgtacccggttacagaa--aaactctcttctttcccagttcatctgcatcttgttattgggccacaaaaat-atgcagcctgacccttggtttggtccaagaacaA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13566920 479 - 18804593 acaagataatgaaggcattcttaacaggacccctttacagttaaacatgttttaccaggggcctgaaggacctccccagactgccacaaataagctttactggggactaaaggaactcgtcaaa-ctccatgatttagtagaagacaagttaagggtaatctgtctggtacctggacccatttagattaagtaaatttgctgaggctccagaggaaggtcttcaggactcagatcttagttacagattagaagttaatcacttctgtctttagatgaatgcacacttacactcagacagatagtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctgtacccggttacagaa--aaactctcttctttcccagttcatctgcatcttgttattgggccacaaaaat-atgcagcctgacccttggtttggtccaagaacaA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13183738 479 + 18905526 acaagataatgaaggcattcttaacaggacccctttacagttaaacatgttttactgggggcctgaaggacctccccagactgccacaaacaagctttactggggactaaaggaactcgtcaaa-ctccatgatttagtaggagacaagttaagggtaatctgtctggtacctggacccatttagatgaagtaaatttgctgaagctccagaggaaggtcttcaggactcagatcttagttacagatgagaagttaatcacttctgtctttagatgaatgcacacttacactcagacagatagtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcccgtacccggttacagaa--aaactctcttctttcccacttcatctgcatcttgttattgggccacaaaaat-atgcagcctgacccttggtttggtccaagaacaA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013411 481 - 72318688 acaagataatgaaggcattcttaacaggacccttttacagttaaacatgttttaccgggggcctgaaggacctccccagactgccacaaacaagctttactggggactaaaggaactccccaaa-ctccatgatttagtaggagacaagataagggtaatctgtctggtacctggacccatttagattaagtaaatttgctgaggctccagaggaaggtcttcaggactcagatcttagttacagattagaagttaatcacttctgtctttagatgaacgcacacttacactcagacagatagtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctgtatccagttacagaaataaactctcttctttcccagttcatctgcatcttgttattgggccacgaaaat-atgcagcctgacccttggtttggtccaagaacaA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347487 479 - 1517660 acaagataatgaaggcattcttaacaggacccctttacagttaaacatgttttactgggggcctgaaggacctccccagactgccgcaaacaagctttactggggactaaaggaactcgtcaaa-ctccatgatttagtaggagacaagttaagggtaatctgtctggtacctggacccatttagatgaagtaaatttgctgaggctccagaggaaggtcttcaggactcagatcttagttacagatgagaagttaatcacttctgtctttagatgaatgcacacttacactcagacagatagtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatatttccccagccttcttcctgtacccggttacagaa--aaactctcttctttcccagttcatctgcatcttgttattgggccgcaaaaat-atgcagcctgacccttggtttggtccaagaacaA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447487 481 + 6513552 acaagataatgaaggcattcttaacaggacccctttacagttaaacatgttttactgggggcccaaaggacctccccaggctgccacaaacaagctttactggggactaaaggaactccccaaa-ctccatgatttagtaggagccaagataagggtaatctgtctggtacctggacccatttagat-aagtaaatttactgaggctctagaggaaggtcttcaggactcagatcttagttacagattagaagttaatcacttatgtctttagatgaatgcacacttacatgcagacagacggtttagaagttatataagctctgcaaaactttgtaattttgagttggtctggtgatacttcccgagccttcttcctgtaccaggttacagaaataaactctcttctttcccagttcatctgcatcttgttattgggctacgaaaataatgcagcctgacccttggtttggtccgagaacaA i colAng1.NW_012115433v1 I 3 C 0 s calJac3.chr13 105223139 481 + 117903854 acaagataatgaaggaattctgaacagaacccatttacgattaaacaagttttactggggacctgaaggaccttcccaaacctcca-caacaagctttattggggactaaaggaactccccaaatctccatgatttagtaggagacaaagtaagggtaatcactctggtacccggaaccatttagattaagtaaatttactgaggctccagaggaaggtcttcaggactcagatcttagttatagattagaaggtaatcatttatatctgtagatgaatccacagttacacatagacagatagcctagaaagtgtataagctctgcaaagccatgtaattttgagttggtctggtgatattttcccagccttctccctgtacctgattacaaaaataaactctcttctttcccagttcatctgcatctcattattaggccatgaaaat-atgtagcctgacccttggtttggtcccagaacCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19414546 482 - 31320352 acaagataatgaaggaattctgaacagaacccatttacgattaaacaggttttactgaggacctgaaggacctccccaaacctccagaaacaagctttattgggaacaaaaggaactccccaagtctccatggtttggtaggagacaaggtaagggtaattactctggtacctggaaccacttagattaagtaaatttattgagtttccagaggaaggtcttcaggactcagatcttagttatagattagaaggcagtcacttttatctgtagatgaatccacagttatacatagatagatagcctagaaggtgtataagctctgcaaagctttgcaattttgagtcggtctggtgacattttcccagccttcttcctgtacctggttacagaaataaactctcttctttcagagtttatctgcatcttattattaggccatgagaat-acgcagcctgtcccttggtttggtcccagaacCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603312 478 + 2203405 acaatataatgaaggaattctgaacagaacccatttacgattaaacaagttttactggggacctgaaggacctccccaaacctgcacaaacaagctttattggggactaaaggaactccccaaacctccatgatttagtaggagacaaggtaagggtaattattctggtacctggaaccatttagactaagtaaatttattgaggctccagaggaaggtcttcaggactcagatcttagtcatagattagaaggtaatcacttatatctgtagatgaatccacagttatacatagacaggcagtctag---gtgtataagctctgcaaagctttgcaattttgagttgatctggtgatattttcccag-cttctccctgtacctggttacagaaataaactctcttctttcccagttcatctgcatctcattattaggccatgaaaat-atgcagcctgacccttggtttggtcccagaacCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3561532 482 - 14941987 acaaattaatgaaggaattctgaacaggacccatttacgattaaacaagttttactggggacctgaaggacctccccaaacctccacaaacaagctttattggggactaaaggaactccccaaatctccatgatttagtaggagacaaagtaagggtaatcactctggtacccgaaaccatttagattaagtaaatttattgaggctccagaggaaggtcttcaggactcagatcttagttatagattagaaggtaatcacttatatctgtacatgaatccacagttacacatagacagatagcctagaaggtgtataagctctgcaaagctttgtaattttgagttggtctggtgatatttttccagccttctccctgtacctggttaccgaaataaactctcttctttcccagttcatctgcatctcattattaggccatgaaaat-atgcagcctgacccttggttcggtcccagaacCA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e dasNov3.JH575754 457802 1 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=177602.000000 s hg38.chr18_GL383571v1_alt 34484 18 + 198278 TTCCACTATAAAATGTGG- s panTro5.chr18 64990638 18 + 78221452 TTCCACTATAAAATGTGG- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113041 18 + 77229886 TTCCACTATAAAATGTGG- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332162 18 + 17472758 TTCCACTATAAAATGTGG- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371016 18 - 152096393 TTCCACTATAAAATGTGG- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323337 18 + 70235451 TTCCACTATAAAATGTGG- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014724 18 - 75711847 TTCCACTATAAAATGTGG- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13567399 18 - 18804593 TTCCACTATAAAATGTGG- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184217 18 + 18905526 TTCCACTATAAAATGTGG- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013892 18 - 72318688 TTCCACTACAAAATGTGG- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347966 18 - 1517660 TTCCACTATAAAATGTGG- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447968 18 + 6513552 TTCCACTATAAAATGTGG- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105223620 18 + 117903854 TGCCACTATGAAGTGTGG- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415028 18 - 31320352 TGCCACTATCAAATGTGG- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603790 18 + 2203405 TGCCACTATCAAATGTGG- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3562014 18 - 14941987 AGCCACTATCAAATGTGG- i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 457803 18 - 2150887 TTGCATTGTGAAAT-TGGC i dasNov3.JH575754 I 1 C 0 e proCoq1.NW_012148742v1 1233177 132 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=2501941.000000 s hg38.chr18_GL383571v1_alt 34502 216 + 198278 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAATAGGATTCACAATTCAATCTCCTGTACCCCAT---AT---attaattggcttacatggctggaagtccatgtcagacagggaaggctttgcttcaggcctaatccagtt---tcattgttctctgactttgtcatctggcccctcttctgtgtgctagcttcatccagaagttagcctctttca s panTro5.chr18 64990656 216 + 78221452 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAATAGGATTCACAATTCAATCTCCTGTACCCCAT---AT---attaattggctcacatggctggaagtccatgtcagacagggaaggctttgcttcaggcctaatccagtt---tcattgttctctgactttgtcatctggcccctcttctgtgtgctagcttcatccagaagttagtctctttca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113059 216 + 77229886 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAATAGGATTCACAATTCAATCTCCTGTACCCCAT---AT---ATTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAATCCAGTT---TCATTGTTCTCTGACTTTGTCATCTGGCCCCTCTTCTGTGTGCTAGCTTCATCCAGAAGTTAGCCTCTTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332180 216 + 17472758 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACAGGATTCACAATTCAATCTCCTGTACCCCAT---AT---attaattggctcacatggctggaagtccatgtcagacagggaaggctttgcttcaggcctaatccagtt---tcattgttctctgactttgtcatctggcccctcttctgtgtgctagcttcatccagaagttagcctctttca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371034 216 - 152096393 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAATAGGATTCACAATTCAATCTCCTGTACACCAT---AT---ACTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTATTCCAGTT---TCATTGTTCTCTGACTTTGTCAtctggcccctcctctgtgtgctagcttcatccagaagttagcctctttca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323355 213 + 70235451 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAT---AT---ATTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAACCCAGTT---TCATTGTTCTCTAACTTTGTCATCTGGTC---CTTCTGTGTGCTGGCTTCATCCAGAAGTTAGCCTCTTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014742 216 - 75711847 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAT---AT---ATTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAACCCAGTT---TCATTGTTCTCTAACTTTGTCATCTGGTCCTTCTTCTGTGTGCTGGCTTCATCCAGAAGTTAGCCTCTTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13567417 216 - 18804593 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAT---AT---ATTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAACCCAGTT---TCATTGTTCTCTAACTTTGTCATCTGGTCCTTCTTCTGTGTGCTGGCTTCATCCAGAAGTTAGCCTCTTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184235 211 + 18905526 ATTTATTATTGAATTA-TATCCTGTCTCTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAT---AT---ATTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAA-----TGCTTCAGGCCTAACCCAGTT---TCATTGTTCTCTAACTTTGTCATCTGGTCCTCCCTCTGTGTGCTGGCTTCATCCAGAAGTTAGCCTCTTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60013910 216 - 72318688 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAT---AT---ATTACTTGGCTCACACGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAACCTAGGT---TCATTGTTCTCTAACTTTGTCATCTGGTCCTTCCTCTGTGTGCTGGCTTCATCCAGAATTTAGCCTCTCTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 347984 216 - 1517660 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAT---AT---ATTAATTGACTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAacccagtt---tcattgttctctaactttgtcatctggtccttcctctgtgtgctggcttcatctagaagttagcctctttca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3447986 208 + 6513552 ATTTATTATTGAATTA-TATCCTGTCTTTGAGGAGCAAGTAACTGGATTCACAATTCAATCTCTTGTACACCAC---AT---ATTAATTGGCTCACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAACCCAGTT---TCATTGTTCTCTAACTTTGTCATCCGGTCCTTCCTCTGTGTGCTGGCTTCATCCAGAAGTT--------TCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105223638 214 + 117903854 ATTTATTATTGAATTC-TGT-CTGTCTTTGAGGACCAAGTAACAGGATTCACAGTTTAATCTCCTGTATAGCAT---GT---ATTAATCGGTTCACATGGCTGGAAGTCCATGTCAAACAGGGAAGGTTCTGCTTCAGGCCTCACCCAGTT---TCATTGTTCTCTGACTTCTTCATCTGGCCCCTCCTCTGT-TGCTGGCTTCATCTGGAAGTTAGCCTCTTTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415046 214 - 31320352 GTTTATTATTGAATTC-TGT-CTGTCTTTGAGGACCAAGTAACAGGATTCACAATTCAGTCTCCTGTATACCAT---GT---ATTAATTGGTTCACATGGCTGGAAGTCCATGTCAAA-AGGGAAGGCTTTGCTTCAGGCCTAACCCAGTT---TCATTGTTCCCTGATTTCTTCATCTGGCCCCTTCTCTGTGTGCTGGCTTCATATGGAAGTTAGCCTCTTTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1603808 215 + 2203405 ATTTATTATTGAATTC-TGT-CTGTCTTTGAGGACCAAATAACAGGATTCACAATTCAATCTCCTGTATACCAT---GT---ATTAATTGGTTCAGATGGCTGGAAGTCCATGTCAAACAGGGAAGGCTTTGCTTCAGGCCTAACCCAGTT---TCATTGTTCTCTGACTTCTTCATCTGGCCCCTCCTCTGTGTACTGGCTTCATTTGGAAGTTAGCCTCTTTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3562032 215 - 14941987 ATTTATTATTGAATTC-TGT-CTGTCTTTGAGGACCAAGTAACAGGATTCACAATATAATCTCCTGTATACCAT---GT---attaattggttcacatggctggaagtccatgtcaaacagggaagactttgcttcaggcctaacccagtt---tcattattctctgacttcttcatctggcccctcctctgtgtgctggcttcatctggaagttagcctctttca i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1233309 219 - 1406956 ATTTGTTATTGAATTA-TATCCTCCCTTTTGGGAGCAAGTAGCAGGAAGCACAATTCAATCTCTTGCACACCATAAGAT---ACTAATTGGCTCATGTAGCTGGAAGTCCTTGTCAAAAAGGGAAGGCTTTCGCTCTGGCCTAACCCAGTT---TTATTGTTCTCTGATTTCCTCATCTGGCTCCTCCTCTGTGTGAAGCCTTCATCTTCAAGTTAGCCTCTTTCA i proCoq1.NW_012148742v1 I 132 I 134 s dasNov3.JH575754 457821 221 - 2150887 ATTTATTATTGAATTAGTATGCTGTGTTTGA--AGCAACTAATAGAAAACACAATTGCATCTTTCCTACAACAT---ATGACATTGATTGGTTCACATACCTTGAAGTTCATGCCAGATAAGGAAGGTTTGGTTCTTGGCTTAATCCAGTGCAACTATTTTTCTCTGAtttcctcatctgaaccctcttctgtgtattggattcatccacaaattggtctctttca i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=900346.000000 s hg38.chr18_GL383571v1_alt 34718 90 + 198278 caacagtaaaatgcatacagcaatttcaggctttccacacactaagtttcccagagatgagcagagtttctttttctgtggctcatacgc s panTro5.chr18 64990872 90 + 78221452 cagcagtaaaatgcatacagcaatttcaggctttccgtacactaagtttcccagagatgagcagagtttctttttctgtggctcatacac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113275 90 + 77229886 CAGCAGTAAAATGCATACAGCAATTTCAGGCTTTCCGTACACTAAGTTTCCCAGAGATGAGCAGAGTTTCTTTTTCTGTGGCTCATACAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332396 90 + 17472758 cagcagtaaaatgcatacagcaatttcaggctttccgcacactaagtttcccagagatgagcagagtttctttttctgtggctcatacgc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371250 90 - 152096393 cagcagtaaaatgcatacagcaatttcaggctttccacacactgagtttcccagagatgagcacagtttctttttctgtggctcatacgc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323568 90 + 70235451 TAGCAGTAAAATGCGTACGACAATTTCAGGTTTTCTGCACACTAAGCTTCCCAGAGATGAACAGAGTTTATTTTTCTGTGGCTCATACAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63014958 90 - 75711847 TAGCAGTAAAATGCGTACAACAATTTCAGGTTTTCTGCACACTAAGCTTCCCAGAGATGAACAGAGTTTATTTTTCTGTGGCTCATACAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13567633 90 - 18804593 TAGCAGTAAAATGCGTACAACAATTTCAGGTTTTCTGCACACTAAGCTTCCCAGAGATGAACAGAGTTTATTTTTCTGTGGCTCATACAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184446 90 + 18905526 TAGCAGTAAAATGCGTACAACAATTTCAGGTTTTCTGCACACTAAGTTTCCCAGAGATGAACAGAGTTTATTTTTCTGTGGCTCATACAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60014126 90 - 72318688 TAGCAGTAAAATGCATACAACAATTTCAGGCTTTCTGCACACTAAGCTTCCCAGAGATGAACAGAGTTTATTTTTCTGTGGCTCATACAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 348200 90 - 1517660 tagcagtaaaatgtgtacaacaatttcaggttttctgcacactaagcttcccagagatgaacagagtttatttttctgtggctcatacac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3448194 90 + 6513552 TAGCAGTAAAATGCGTACAACAATTTCAGGCTTTCTGCACACTAAACTTCCCAGAGATGAACAGAGTTTATTTTTCTGTGGCTCATACAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105223852 90 + 117903854 TAGCAGTAAAATGCATGCAGCAATTTCAGGCTTCCCACACATTAGTCTTCCCAGAGATTAGGAGCGTTTCTTTTTCTGTGGCTCATACTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415260 90 - 31320352 TAGCGGTAAAATGCATATAGGAATTTCAGGCTTCCCACACACTAGTCCTCCCAGAGATTAGGAGAATTTCTTTTTCTGTGGCTCATGCTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1604023 90 + 2203405 TAGCAGTAAAATGCACACAGCAATTTCAGGCTTCCCACACACTAGTCCTCCCAAAGATTAGAAGAGTTTCTTTTTCTGTGGCTCATACTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3562247 90 - 14941987 tagcagtaaaatgcatacagcagcttcaggtttcccacacactagtcttcccagagattaggagagtttctttttctgtggctcaaactc i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 458042 87 - 2150887 ttgtggtaaaatggataaagcaattccaggcttcctacacacta--ctgtccagagatgggatgcatttcttttcctgtgactcactcc- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1233528 134 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=409974.000000 s hg38.chr18_GL383571v1_alt 34808 35 + 198278 ------taag-----------------atatttcttcccagaagcttccagcaaaact s panTro5.chr18 64990962 35 + 78221452 ------taag-----------------atatttcttcccagaagcttccagcaaaact i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113365 35 + 77229886 ------TAAG-----------------ATATTTCTTCCCAGAAGCTTCCAGCAAAACT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332486 35 + 17472758 ------taag-----------------atatttgttcccagaagcttccagcaaaact i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371340 35 - 152096393 ------ttag-----------------atatttcttcccagaagcttccagcaaaact i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323658 52 + 70235451 ------TAAGCCACAGTGTAATTTTCTGGATTTCTTCCCAGAAGCTTCCAGCAAAACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63015048 35 - 75711847 ------TAAG-----------------ATATTTCTTCCCAGAAGCTTCCAGCAAAACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13567723 35 - 18804593 ------TAAG-----------------ATATTTCTTCCCAGAAGCTTCCAGCAAAACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184536 35 + 18905526 ------TAAG-----------------ATATTTCttcccagaagcttccagcaaaact i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60014216 35 - 72318688 ------TAAG-----------------ATATTTCTTCCCAGAAGCTTCCAGCAAAACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 348290 35 - 1517660 ------taag-----------------atatttcttcccagaagcttccagcaaaact i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3448284 35 + 6513552 ------TAAG-----------------ATATTTCttcccagaagcttccagcaaaact i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105223942 35 + 117903854 ------TAAG-----------------CTATTTCTTCCCAGAAGCTTCCTGCAAAACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415350 35 - 31320352 ------TAAA-----------------CTATTTCTTTCCAGAAGCTTCCAGCAAAACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1604113 35 + 2203405 ------TAAA-----------------CTATTTCTTCCCAGAAGCTTGCAACAAAACT i cebCap1.NW_016107689v1 C 0 I 10 s aotNan1.NW_018502140v1 3562337 35 - 14941987 ------taag-----------------ctatttcttcccagaagttttcagcaaaact i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1233662 35 - 1406956 ------taag-----------------atatttcttcctagaaccttccagcagaact i proCoq1.NW_012148742v1 I 134 C 0 s dasNov3.JH575754 458129 42 - 2150887 tatgattaaga----------------acattccttcccagaagcaaccagcaaattt i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=112862.000000 s hg38.chr18_GL383571v1_alt 34843 16 + 198278 cccctcgagtcatatg s panTro5.chr18 64990997 16 + 78221452 cccctcgagtcatatg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113400 16 + 77229886 CCCCTCGAGTCATATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332521 16 + 17472758 cccctcgagtcatatg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371375 16 - 152096393 cccctcaagtcacatg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323710 16 + 70235451 CCCCTTGAGTCATATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63015083 16 - 75711847 CCCCTTGAGTCATATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13567758 16 - 18804593 CCCCTTGAGTCATATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184571 16 + 18905526 ccccttgagtcatatg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60014251 16 - 72318688 CCCCTTGAGTCATATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 348325 16 - 1517660 ccccttgagtcatatg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3448319 16 + 6513552 ccccttgagtcatatg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105223977 12 + 117903854 --CATCATGTCATG-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415385 12 - 31320352 --CATCATGTCATG-- i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3562372 12 - 14941987 --catcatgtcatg-- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1233697 16 - 1406956 gccttagtgtcatatg i proCoq1.NW_012148742v1 C 0 C 0 s dasNov3.JH575754 458171 16 - 2150887 cctctggagtcacatg i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I e cebCap1.NW_016107689v1 1604148 10 + 2203405 I a score=2714797.000000 s hg38.chr18_GL383571v1_alt 34859 231 + 198278 tgtgtgaatagagtcataagccaacctctgaatcaatctttgtatcaaagtgatcaaagtggtggaattaactctggatcaatgat------gcctcatccttggaactagtaatgaagtca-gTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-C-AA-AAATAGGTATCATTGTTATGAAAAGTGAAAATATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT s panTro5.chr18 64991013 231 + 78221452 tgtgtgaatagagtcataagccaacctgtgaatcaatctttgtatcaaagtgatcaaaatggtggaattaactctggatcaatgat------gcctcatccttggaactagtaatgaagtca-gTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-C-AA-AAATAGGTATCATTGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113416 231 + 77229886 TGTGTGAATAGAGTCATAAGCCAACCTGTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGAT------GCCTCATCCTTGGAACTAGTAATGAAGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-C-AA-AAATAGGTATCATTGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332537 231 + 17472758 tgtgtgaatagagtcataagccaacctctgaatcaatctttgtatcaaagtgatcaaagtggtggaattaactctagatcaatgat------gccccatccttggaactagtaatgaagtca-gtttccGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-C-AA-AAATAGGTATCATTGTTATGAAAAGTGAAAACATCTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371391 238 - 152096393 tgtgtgaatagagtcataagccaacctctgaatcaatctttgtatcaaagtgatcaaagtggtggaattaactctggatcaatgatgcctcagcctcatccttggaactagtaatggagtca-gTTTCTGATCAGCTTCCTTAACAGAAGTTAAAC----------AAAAACCTAC-CAAA-AAATAGGTATCATTGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323726 232 + 70235451 TGTGTGAATAGAGTCATAAGCCAACCTCTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGAC------ACCTCATCCTTGGAACTAGTAATGATGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63015099 232 - 75711847 TGTGTGAATAGAGTCATAAGCCAACCTCTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGAC------ACCTCATCCTTGGAACTAGTAATGATGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13567774 232 - 18804593 TGTGTGAATAGAGTCATAAGCCAACCTCTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGAC------ACCTCATCCTTGGAACTAGTAATGATGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184587 232 + 18905526 tgtgtgaatagagtcataagccaacctctgaatcaatctttgtatcaaagtgatcaaagtggtggaattaactctggatcaatgat------gcctcatccttggaactagtaatgatgtca-gTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60014267 232 - 72318688 TGTGTGAATAGAGTCATAAGCCAACCTCTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGAT------GCCTCATCCTTGGAACTAGTAATGATGTCA-GTTTCTGATAAGCTTCCTTAACAGAAGTCAAAC----------AGAAACCTAC-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 348341 232 - 1517660 tgtgtgaatagagtcataagccaacctctgaatcaatcTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGAC------GCCTCATCCTTGGAACTAGTAATGATGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAA-AAGATTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3448335 232 + 6513552 tgtgtgaatagagtcataagccaacctctgaatcaatctttgtatcaaagtgatcaaagtggtagaattaactctggatcaatgat------gcctcatccttggaactagtaatgatgtca-gTTTCTGATCAGCTTCCTTAACAGAAGCCAAAC----------AAAAACCTAG-CAAA-AAATAGGTATCATGGTTATGAAAAGTGAAAACATTTTAGATTCTGGGTTTTCTTCTCACAA-AAGATTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105223989 233 + 117903854 TGTGTGAATAGGGTCATAAGTCAACCTCAGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTAGAATTAACTCTGGATCAATGAT------GCCTCATCCTTGGAACTGGTAGTGGAGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAACTAAATAGGTATCATTGCTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACCG-AAGATTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415397 233 - 31320352 TGTGTGAATAGGGTCATAAGTCAACCTCAGAATCAATCTTTGTATCAAAGTGATCGTAGTGGTACAATTAACTCTGGATCAATGAT------GCCTCATCCTTGGAACTGGTAGTGGAGTCA-GTTTCTGATCAGCTTCCTTAACAGAATTCAAAC----------AAAAACCTAC-CAAATAAATAGGTATCATTACTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCACAG-AAGATTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1604158 233 + 2203405 TGTGTGAATAGGGTCTTAAGTCAACCTCAGAATCAATCTTTGTATCAAAGTGATCAAAGTAGTAGAATTAACTCTGGATCAGTGAT------GCCTCATCCTTGGAACTGGTAGTGGAGTCA-GTTTCTGATCAGCTTCCTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAATAAATAGATATCATTGCTATGAAAAGTGAAAACATTTTAAATTCTGAGTTTTCTTCTTACAG-AAGATTAT i cebCap1.NW_016107689v1 I 10 C 0 s aotNan1.NW_018502140v1 3562384 233 - 14941987 tgtgtgaatagggtcataagtcaacctcagaatcaatctttgtatcaaagtgattaaagtggtagaattaactctggatcaatgat------gcctcatccttggaactggtagtggagtca-gTTTCTGATCAGCTTACTTAACAGAAGTCAAAC----------AAAAACCTAC-CAAATAAATAGGTATCATTGCTATGAAAAGTGAAAACATTTTAGATTCTGAGTTTTCTTCTCATAG-AAGATTAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1233713 224 - 1406956 tgtatgaatagggcaagaagccaattcctgaaccaatcTTTGTATCAAAGCAGTC---------GGATTAACTCTGTATCAAGGA-------ACCTCATCCTTGGAACTGGTAATGGAGTCAGGTTTCTGTCCAGCTTCCTAAACAAAAATCAAAC----------AAAAACCTACACAAA-AAATAGGTATCATTGAGATTGAAAGTGAAAACATTTTAGATTCTGGATCTTCTTCTTGCAG-AAGATTAT i proCoq1.NW_012148742v1 C 0 I 5983 s dasNov3.JH575754 458187 232 - 2150887 ggtgtgaatagcaagatgaactaattcctgaaccaatctctgaatcaaggtaat---------gggattaacactgattCAATGAC------ACATCTCCCTTGTAACTGGATGTAGATCCA-TTCCCTGACCAGCTTCCTGAACAATACACAAACAAATAGAAAAAAAAAAATGC-C-AC-AACTATTTATCTTTGAAACAGAGAAGAAAAGCATTTTACATCTTAGATTTTCTCCTTGCAACAAGCTTA- i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=6535726.000000 s hg38.chr18_GL383571v1_alt 35090 663 + 198278 TCAAAACTAAGTTTAAGAGATATATAGTTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTAATGATATTTA-TAGAATAGCTA-AGATTTAA-AAATAATTGTAATTATATTGATAT--AGTGAGTTAGAAAATT-ATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGGATTGTCGTCAAAGCTGAAGAACTACAATAAAACA-AACAGAATTTTATCACATAA----------------------CTTAGAAATAGTAAAACACACCCCAGAATATTAACTGAGATATTTCCTCATAACCAG-TATGTTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAACAATTTTGATTAATCTATTTATGTCATGGATTCTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAATTCTAGTATTACATCTTATTCTAAATAAATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGATATGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattctcttgaaattgaatgaattgaactgaatCAATTTGGTGATTTTTCTGAAGATTCTtgttttggttaattattgctgcataacatattaccacaaatcataatggcttaa--aacaa s panTro5.chr18 64991244 662 + 78221452 TTAAAACTGAATTTAAGAGATATATAATTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTAATGATATTTA-TAGAATAGCTA-AGATTTAA-AAATAATTGTAATTATATTGACAT--AGTGAGTTAGAAAATT-ATTAATAGCAATTACTCATCAAGGAAAGAGTCTGTTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTACAATAAAACA-AAC--AATTTTATCACATAA----------------------CTTAGAAATAGTAAAACACACCCCAGAATATTAAGTGAGATATTTCCTCATAACCAGATATGTTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAGCC-----AAGAGGTTGAAACAATTTTGATTAATCTATTTATGTCATGGATTCTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAATTCTAGTATTACATCTTATTCTAAATAAATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGATATGTATGCATGATAAAATTGTCTGACA----TTTTGAAAATTGGATTCTCCTGAAACTGAATGAATGGAATTGAATCAATTTGGTGATTTTTCTGAAGATTCTtgttttggttaattattgctgcataacatattaccacaaatcataatggcttaa--aacaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64113647 662 + 77229886 TTAAAACTGAGTTTAAGAGATATATAATTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTAATGATATTTA-TAGAATAGCTA-AGATTTAA-AAATAATTGTAATTATATTGACAT--AGTGAGTTAGAAAATT-ATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTACAATAAAACA-AAC--AATTTTATCACATAA----------------------CTTAGAAATAGTAAAACACACCCCAGAATATTAAGTGAGATATTTCCTCATAACCAGATATGTTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAACAATTTTGATAAATCTATTTATGTCATGGATTCTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAATTCTAGTATTACATCTTATTCTAAATAAATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGATATGTATGCATGATAAAATTGTCTGACA----TTTTGAAAATTGGATTCTCCTGAAACTGAATGAATTGAATTGAATCAATTTGGTGATTTTTCTGAAGATTCTtgttttggttaattattgctgcataacatattaccacaaatcataatggcttaa--aacaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5332768 663 + 17472758 TTAAAACTGAGTTTAAGAGATATATAGTTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTGATGATATTTA-TAGAATAGCTA-AGATTTAA-AAATAATTGTAATTATATTGACAT--AGTGAGTTAGAGAATT-ATTAATAGCAATTACTCATCAAGGAAAGTGTTTGTTATTTTG---AGGATTGTCGTCAAAGCTGAAGAACTACAATAAAACA-AACAGAATTTTATCACATAA----------------------CTTAGAAATAGTAAAACACACCCCAGAATATTAACTGAGATATTTCCTCATAACCAG-TATATTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAACAATTTTGATTAATCTATTTATGTCATGGATTCTTTACAAAA--AATTTCTTCTT---------GTT-----------------TGCCTCTTGCTTAAGCATTACAATTCTAGTATTACATCTTATTCTAAATAAATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGATATGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattctcttgaaattgaatgaattgaattgaatCAATTTGGTGATTTTTCTGAAGATTCTtgttttggttaattattgctgcataacatattaccacaaatcataatggcttaa--aacaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139371629 664 - 152096393 TTAAAAATGAGTTTAAGAGATATATAGTTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTAATGATATTTA-TAGAATAGCTA-AGATTTAA-AAATAATTGTAATTATATTGACAT--AGTGAGTTAGAAAATT-ATTAATAGCAATTACTCATCAAGGAAATAGTTTGTTATTTTG---AGGATGGTCATCAAAGCGGAAGAACTACAATAAAAGG-AACAGAATTTTATCACATAA----------------------CTTAGAAATAGTAAAACATATCCCAGAATGTTAACTGAGATATTTCCTCATAACCAGATATGTTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAACAATTTTGATTAATCTATTTATGTCATGGATTCTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTATAATTCTAGTATTACGTCTTATTCTAAATAAATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGGTATGTATGCATGATAAAATTGTCTGACA----TTTTGAAAACTGGATTCTCttgaaattgaatgaattgaattgaatCAATTTGGTGATTTTTCTGAAGATTCCtgctttggttaattattgctgcataacatattaccacaaatcataatggcttaa--aacaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57323958 682 + 70235451 TTTAAAATGAGTTTCAGGGATGTATAGTTTTAACAAGACACCAGAATGTGAGTGATATACTACAATATTAATGATATTTA-TAGAATAGCTA-GGAGTTTT-AAATAATTGTAATTATATTGACAT--AGTGAATTAGAAAAGT-ATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGAATTGTCATCAAAGCTGAAGAACTACAATAAAACG-AACAGAATTTTATCACATAA----------------------CTTAGAAATAGTGAAACATATCCCAGAATATTAACTGAGATATTTCCTCATAACAAGATATGTTTGGAGTATAGCATATAAGAACAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAATCTATTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGTATTACAACTCTAGtattacatcttattctaaataaattatttagaattaaataaattatttattatttaAAC--TGTTTTCAAAGGTATGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattcccttgaaattgaatgaattgaattgaaCCAATTTGGTGATTTTTCTGAAGATGCCtgttttggttaattattgctgcataacatgttaccacaaatcataatggcttaa--aacaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63015331 682 - 75711847 TTTAAAATGAGTTTCAGGGATGTATAGTTTTAACAAGACACCAGAATGTGAGTGATATACTACAATATTAATGATATTTA-TAGAATAGCTA-GGATTTTT-AAATAATTGTAATTATATTGACAT--AGTGAATTAGAAAAGT-ATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGAATTGTCATCAAAGCTGAAGAACTACAATAAAACG-AACAGAATTTTATCACATAA----------------------CTTAGAAATAGTGAAACATATCCCAGAATATTAACTGAGATATTTCCTCATAACAAGATATGTTTGGAGTATAGCATATAAGAACAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAATCTATTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGTATTACAACTCTAGtattacatcttattctaaataaattatttagaattaaataaattatttattatttaAAC--TGTTTTCAAAGGTATGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattcccttgaaattgaatgaattgaattgaaCCAATTTGGTGATTTTTCTGAAGATGCCtgttttggttaattattgctgcataacatgttaccacaaatcataatggcttaa--aacaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13568006 682 - 18804593 TTTAAAATGAGTTTCAGGGATGTATAGTTTTAACAAGACACCAGAATGTGAGTGATATACTACAATATTAATGATATTTA-TAGAATAGCTA-GGATTTTT-AAATAATTGTAATTATATTGACAT--AGTGAATTAGAAAAGT-ATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGAATTGTCATCAAAGCTGAAGAACTACAATAAAACG-AACAGAATTTTATCACATAA----------------------CTTAGAAATAGTGAAACATATCCCAGAATATTAACTGAGATATTTCCTCATAACAAGATATGTTTGGAGTATAGCATATAAGAACAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAATCTATTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGTATTACAACTCTAGTATTACATCTTATTCTAAATAAAGTATTTAGAATTAAATAAATTATTTATTATTTAAAC--TGTTTTCAAAGGTATGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattcccttgaaattgaatgaattgaattgaaCCAATTTGGTGATTTTTCTGAAGATGCCtgttttggttaattatttctgcataacatgttaccacaaatcataacggcttaa--aacaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13184819 682 + 18905526 TTTAAAATGAGTTTAAGGGATGTATAGTTTTAACAAGACACCAGAGTGTGAGTGATATACTACAATATTAATGATATTTA-TAGAATAGCTA-GGATTTTA-AAATGATTGTAATTATATTGACAT--AGTGAATTAGAAAAGT-ATTAAGAGAAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTACAATAAAAAGAAACAGAATTTTATCACATAA----------------------CTTAGAAATAGTAAAACATATCCCAGAATATTAACTGAGATATTTCCTCATAACCAGATATGTTTGGAGTATAGCATACAAGAACAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAATCTATTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAATTCTAGtattacatcttattctaaataaattatttagaattaaataaattatttattatttaAAC--TGTTTTCAAAGGTACGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattcccttg-aattgaatgaactgaattgaaCCAATTTGGTGATTTTTCTGAAGATGCCtgttttggttaagtattgctgcataacatgttaccacaaatcataatggcttaa--aacaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60014499 680 - 72318688 TTTAAAATGAGTTTAAGGGATGTATAGTTTTAACAAGACACCAGAGTGTGAGTGATATACTACAGTATTAATGATATTTA-TAGAATAGCTA-GGATTTTA-AAATGATTGTAATTATATTGACAT--GGTGAATTAGAAAAGT-ATTAATAGCAATTACTCATCAAGGAAAGAGT---TTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTACAATAAAAAGAAACAGAATTTTATCACATAA----------------------CTTAGAAATAGTAAAACATATCCCAAAATATTAACTGAGATATTTCCTCATAACCAGGTATGTTTGGAGTATAGCATGTAAGAACAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAACCTGTTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAACTCTAGtattacatcttattctaaataaattatttagaattaaataaattatttattatttaAAC--TGTTTTCAAAGGTACATATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattcccttgaaattcaatgaattgaattgaaCCAATTTTGTGATTTTTCTGAAGATTCCtgttttggttaattattgctgcataacgtgttaccacaaatcataatggcttaa--aacca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 348573 683 - 1517660 TTTAAAATGAGTTTAAGGGATGTATAGTTTTAACAAGACACCAGAGTGTGAGTGATATACTACAATATTAATGATATTTA-TAGAATAGCTA-GGATTTTA-AAATGATTGTAATTATATTGACAT--AGTGAATTAGAAAAGT-ATTAAGAGAAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTACAATAAAAAGAAACAGAATTTTATCACATAA----------------------CTTAGAAATAGTAAAACATATCCCAGAATATTAACTGAGATATTTCCTCATAACCAGATATGTTTGGAGTATAGCATACAAGATCAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAATCTATTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAATTCTAGtattacatcttattctaaataaattatttagaattaaataaattatttattatttaAAC--TGTTTTCAAAGGTACGTATGCATGATAAAATTGTCTGACA----TTTTGAAaattggattcccttgaaattgaatgaactgaattgaaCCAATTTGGTGATTTTTCTGAAGATTCCtgttttggttaagtattgctgcataacatgttaccacaaatcataatggcttaa--aacaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3448567 682 + 6513552 TTTAAAATGAGTTTAAGGTATGTATAGTTTTAACAAGACACCAGAGTGTGAGTGATACACTACAATATTAATGATATTTA-TAGAATAGCTA-GGATTTTA-AAATAATTGTAATTATATTGACAT--AGTGAATTAGAAAAGT-ATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTG---AGGATTATAATCAAAGCTGAAGAACTACAATAAAACG-AACAGAATTTTATCACGTAA----------------------CTTAGAAATAGTAAAACATATCCAAGAATATTAACTGAGATATTTCCTCATAACAAGGTATGTTTGGAGTATAGCATATAAGAACAGGTAATCAAAAATGTTCATTAAACAACAACC-----AAGAGGTTGAAATAATTTTGATTAATCTATTTATGTCATGGATTCTTTATAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAACTCTAGtattatgtcttattctaaataaattatttagaattaaataaattatttattgtttaAAC--TGTTTTCAAGGGTACATATGCAAGATAAAATTGTCTGACA----TTTTGAAaattggattcccttgaaattgaatgaattgaattgaaCCAATTTGGTGATTTTTCTGAAGATTCCtgttttggttaattattgctgcataacatgttaccacaaatcataatggcttaa--aacaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105224222 656 + 117903854 TTAAAAAACAGTTTAAGGGATGTATAGGTTTAACCAGACACCAGAGTGTGAGTGATATATTACAATGTTAATGATATTTA-TAAAATAGAGAAGGATGTAA-AAATAATTGTAATTATATTGGCAT------AGTCAGAAAATT-ATTAATAGCAATTACTCATCAAGGAAAGAGGTTGTTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTATAACAGAATG-AACAGCATTTTATGACGTAA----------------------CTTAAAAACAGTAAAACATATCCCACAATATTAACTGAGATATTTCCTCATAACCAGATTTGTTTGGAGCAAAGCATACGATAATGGATAATCAAAAATGTTCATTAAACAACAACC-----AAGAAGTTGAAAAACCGTTGAT-----TATTCATGTCATAGAGTTTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGTATCACAACTCTAGTATTGCTTCTTACCCTAAACACATT----------------ATTACATAT--TTTAAAC--TGTTTTCAAAGTTATGTATGCATGATGAAATTTTCTGACA----TTTTGAAAATGGGATTCCCTtgaaattgaatgaatgaaatgaaatgaaatgGGTGATATTTCTGAAGATTCGtattttggttaattattgctgcataacatgttaccacaaatcttaacggcttaa--aacaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19415630 663 - 31320352 TTAAAAAACAGTTTAAGGGATGTACAGATTTAACAAGACACCAGAGTGTGAATGATATATTACAATGTTAAGGATATTTA-TAAAATAGAGACGGGTTTAA-AAATAATTGTCATTATATTGGCAT--AGTGAGTTAGAAAATT-ATTAATAGCAATTACTTATCAAGGGAAGAGGTTGTTATTTTG---AGGATTGTCATCAAAGCTGAAGAACTACAATAGAACA-AATAGGATTTTATCACATAA----------------------CTTAGAAATAGTAAAACATATCCCACAATATTAACTGAGATATTTCCTCATAGCCAAATTTGTTTGGAGTATAGAATATAATAATAGATAATCAAAAATGTTCATTAAACAACAACG-----AAGAAGTTGAAAAACCTTTGATTAATCTATTTATGTCATAAAGTTTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAACTCTGGTATTACTTCTTAGTCTAAATACATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGGGATGTATGCATGGTGAAATTTTCTGACA----CTTTGAAAGCTGGATTCCCTTAAAATTGAATAAATTAAATGAAATGAAATGGGCGATATTTCTGAAGATTTGtgttttggttaattactgctgcataaca--ttaccacaaattttaatggcttaa--cacaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1604391 664 + 2203405 TTAAAAAACAGTTTAAGGGATGTATAGGTTTAACAAGACACCAGAGTGTGAGTGATATATTACAATGTTAAGTATATTTA-TAAAATAGAGAAGGATTTAA-AAATAATTGTAATTATATTGGCAT--AGT-CATTAGAAAATT-ATTAATAGCAATTACTCATCAAGGAAAGAGATTGTTATTTTG---AGGAGTGTCATCAAAGCTGAAGAACTACAATAGAACA-AACAGCATTTTATCACATAA----------------------CTTGGAATTAGTAAAACATATCTCACAATATTAACTGAGATATTTCCTCATAACCAAATTTGTTTGGCATATAGCATATAATAATAGGTAATCAAAAATGTTCATTCAACAACAACC-----AAGAAGTTGAAAAACCTTTGATTAATCTATGTATGTCATAGAGTTTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTCTTGCTTAAGCATTACAACTCTGGTATTACTTCTTAGTCTAAATACATT----------------ATTATATAT--TTTAAAC--TCTTTTCAAAGGTATGTATGCATGGTGAAATTTTCTGACA----TTTTGAAAAATGGATTCCCTtgaaattgaatgaattaaatgaaatgaaatgGGTGATATTTCTGAAGATTTGtattttggttaattactgctgcataacatgttaccacaaatcttaatggcttaa--aacaa i cebCap1.NW_016107689v1 C 0 I 6376 s aotNan1.NW_018502140v1 3562617 625 - 14941987 TTAAAAAACAGTTTAAGGGATGTATAGGTTTAACAAGACACCAGAGTGTGAGTGATATATTACAATGTTAATGATATTTA-TAAAATAGAGAAGAATTTAA-AAATAATTGTAATTATATTGGCAT--AGTGAGTTAGAAAATT-ATTAATAGCAATTGCTAATCAAGGAAAGAGGTTGTTATTTTG---AGGACTGTCATCAAAGCTGAAGAACTACAATAGAACG-AACAGCATTTTATCAAAAAA----------------------CTTAGAAACAGTAAAACATAACCCACAATATTAACTGAGATATTTCCTCATAACCAAATTTGTTTGGAGTATAGCATATAATAATAGATAATCAAAAATG---------------------------------------------AATCTATTTATGTCATAGAGTTTTTACAAAA--AATTTCTTCTG---------GTT-----------------TGCCTTTTGCTTAAGTATTACAACTCTAGTATTACTTCTTACTCTAAATACATT----------------ATTATATAT--TTTAAAC--TGTTTTCAAAGGTATGTATGCATGATGACATTTTCTGACA----TTTTGAAAATTGGATTCCCTtgaaattaaatgaattaaatgaaatgaaatgGGTGATATTTCTGAAGATTCAtgttttggttaactattgctgcataacatgttaccacaaatcttaatggcttaa--aacaa i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 458419 691 - 2150887 -TCAAAGCCAATTTAATAGATGCAGAGTTTTCATATATCACCAGAGTATGAGTGATGCATTAAACCCCTAATGATGTTAAGTAAAATAGCTA-GGATTTAACAAATTAATGTAATTATGTTAACATACAGTGAGTTCAAAAATTGATTTACATCAATTCTTCATCAAGGAAAGAATTTGTAATTTTGAGAAGGATCACCATCAAAGCTG----GCTTCAATAGAACG-GGCAGAATTCCATCATTTAATGTATAAACAGCAAAAAAAAACCTTAAAAAAAGCAAAACATATCCCAGATTATCAACTG------------ATAACTAAATATCCTTAGACTACAAAATATAACAGCAGACCATCAAAACTGCTCTCCAAAAACCAATCAAATAAAGATGATGAAACTATTTGTAT-AATCTATTTACATCATAGTCTTTTGCCAAAGTTAATTTCCTCCAGAATATTCCGTTACAGATCCATCTATAAATGTCTCCTGCTAATCCATAACAACAAATGTATTTCTTCCCACTCTAAATAAACT----------------GTTTCAATT--TACAAACTATGTTTTCAAAGGTATGTGT----GATAAAATTTTGTGAAAAAGCTTTTTAAAATCAGACTCATTT----------------------ACCAAGTTGGTGATTTTTCTGAAGATCTGtgctccagttaactattgctgcctaataaatcaccctaatttttaatagcttaaacagcaa i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=483099.000000 s hg38.chr18_GL383571v1_alt 35753 47 + 198278 cagccatttattttactcataaatttgcaatttgagtagagctttgt s panTro5.chr18 64991906 47 + 78221452 gagccatttattttactcataaatctgcaatttgagtagagctttgt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64114309 47 + 77229886 cagccatttagtttactcataaatctgcaatttgagtagagctttgt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5333431 47 + 17472758 cagccatttattttactcataaatctgcaattttagtagagctttgt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139372293 47 - 152096393 cagccatttattttgctcataaatctgcaatttgagtagagctttgt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57324640 47 + 70235451 cagccatttattttgctcataaatctgcaatttgaacagagctttgt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63016013 47 - 75711847 cagccatttattttgctcataaatctgcaatttgaacagagctttgt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13568688 47 - 18804593 cagccatttattttgctcataaatctgcaatttgaacagagctttgt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13185501 47 + 18905526 cagccatttattttgctcataaatctgcaatttgaacagagctttgt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60015179 47 - 72318688 cagccatttattttgctcataaatctgcagtttgaacacagctttgt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 349256 46 - 1517660 cag-catttattttgctcataaatctgcaatttgaacagagctttgt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3449249 47 + 6513552 cagccatttattttgctcataaatctgcaatttgaacagagctttgt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105224878 47 + 117903854 cagccctttattttgcttataaatctgcaatttgaagacagctttgt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19416293 47 - 31320352 cagccatttattttgcttataaatctgcaatttgaagagagctttgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1611431 46 + 2203405 cagccattta-tttgcttatacatctgcaatttgaaaagagctttgt i cebCap1.NW_016107689v1 I 6376 C 0 s aotNan1.NW_018502140v1 3563242 47 - 14941987 cagccatttattttgcttataaatctgcaatttgaagacagctttgt i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 459110 47 - 2150887 caaccatttattttgctcatgaaacaacaatgtggagcaggcatggt i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=4440347.000000 s hg38.chr18_GL383571v1_alt 35800 493 + 198278 tggaatgattcttccctgctcctcatagcattatcaaaggctgcc--ctaacaggggctagaagacccactttcaaaatagttcactcacatgactgaagagtatgtgggacttcagctgtgctagtgggattggcacccatg-gctgactgggcatcctcagagcaggagcgtggtgggtgggttccaaaagcaagcctcacaagaaagcaaagc-agaagtgcatgggagtgtatgatctagcttcagaagtcacagaacatcaattctagcatactgcatacaacaaggaaattacaaaaggccacctaggcttacagcaccaagacatgatgtaa-------ccagttccta-------agaagcatataagatgagagatattgcagcacccccatgtgcaaaatacaacccgAGTCAACCCCCAGCAATTACTTTCTTCTTCTTCCCTCTCTCTTCTCCCTTGCTCCTGCCATCTCTC-TTTTATCTTTACTGTGTGGATTTA-----TTT s panTro5.chr18 64991953 493 + 78221452 tgcaatgattcttccctgctcctcatagcattatcaaaggctgcc--ctaacaggggctagaagacccactttcaaaatagttcactcacatgactgaagagtatgtgggacttcagctgtgctagtgggattggcacccatg-gctgactgggcatcctcagagcaggagcgtggtgggtgggttccaaaagcaagcctcacaagaaagcaaagc-agaagtgcatgggagtgtatgatctagcttcagaagtcacagaacatcaattctagcatactccatacatcaaggaaattacaaaaggccacctaggcttacagcaccaagacatgatgtaa-------ccagttccta-------agaagcatataagatgagagatattgcagcacccccatgtgtaaactacaacccgAGTCAACCCCCAGCAATTACTTTCTTCTTCTTCCCTCTCTCTTCTCCCTTGCTCCTGCCATCTCTC-TTTTATCTTTACTGTGTGGATTTA-----TTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64114356 493 + 77229886 tgcaatgattcttccctgctcctcatagcattatcaaaggctgcc--ctaacaggggctagaagacccactttcaaaatagttcactcacatgactgaagagtatgtgggacttcagctgtgctagtgggattggcacccatg-gctgactgagcatcctcagagcaggagcgtggtgggtgggttccaaaagcaagcctcacaagaaagcaaagc-agaagtgcatgggagtgtatgatctagcttcagaagtcacagaacatcaattctagcatactccatacatcaaggaaattacaaaaggccacctaggcttacagcaccaagacatgatgtaa-------ccagttccta-------agaagcatataagatgagagatattgcagcacccccatgtgtaaactacaacccgAGTCAACCCCCAGCAATTACTTTCTTCTTCTTCCCTCTCTCTTCTCCCTTGCTCCTGCCATCTCTC-TTTTATCTTTACTGTGTGGATTTA-----TTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5333478 492 + 17472758 tggaatgattcttccctgctcctcatagcattatcaaaggctgcc--ctaacaggggctagaagacccactttcaaaatagttcactcacatgactgaagagtatgtgggacttcagctgtgctagtgggatttgcacccatg-gctgactgggcatcctcagagcaggagcgtggtgggtgggttccaaaagcaagcctcacaagaaagcaaagc-agaagtgcatgggagtgtatgatctagcttcagaagtcacagaacatcaattctagcatactccatacatcaaggaaattacaaaaggccacctaggcttacagcaccaagacatgatgtaa-------ccagttccta-------agaagcatataagatgagagatattgcagcacccccatgtgcaaaatacaacctgAGTCAACCCCCAGCAATTActttc-tcttcttccctctctcttctcccttgctcttgccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139372340 493 - 152096393 tggaatgattcttccctgctcctcatagcactatcaaaggctgcc--ctaacagggactagaagacccactttcaagatagttcactcacatgactgaagagtatgtgggacttcagctgtgctagtgggattggcacccatg-gctgactgggcattctcagagcaggagcgtggtgagtgggttccaaaagcaagcctcacaagaaaccaaagc-agaagtgcatgggagtgtatgatctagcttcagaagtcacagaacatcaattctagcatactctatacatcaagaaagttacaaagggcaacctaggcttacagcaccaagacatgatgtaa-------ccagttccta-------agaagcatataagatgagagatattgcagcacccgcatgtgcaaaataaaatctgAGTCAACCCCCAGCAATTACTTTCTTCTTCCTCCCTCTCTCTTCTCCCTTGCTCTCGCCATCGCTC-TTTTATCTTTACTGTGTGGATTTA-----TTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57324687 490 + 70235451 tgaaatggttcttccctgctcctcatagcattatcaaaggctgcc--ct---aggggctagaagactcactttcaagatagttcactcacatgactgaagagtatgtgggacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagaggaggagcatggtgggtgggttccaaaagcaagcctcacaagcaaacgaagc-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatactccatatatcaaggaaattacaaagggccacctaggtttatggCACCAAGACACGATTGAA-------CCAGTTCCTA-------AGAAGCTTATAAGATGAGAGAGATTGCAGCACCAGCATGTGCAAAATACGACCTGAGTCAACCCCCAGCAATTActttcttcttcttccctctctcttctctcttgctctcaccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63016060 490 - 75711847 tgaaatggttcttccctgctcctcatagcattatcaaaggctgcc--ct---aggggctagaagactcactttcaagatagttcactcacatgactgaagagtatgtgggacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagaggaggagcatggtgggtgggttccaaaagcaagcctcacaagcaaacgaagc-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatactccatatatcaaggaaattacaaagggccacctaggtttatggCACCAAGACACGATTGAA-------CCAGTTCCTA-------AGAAGCTTATAAGATGAGAGAGATTGCAGCACCAGCATGTGCAAAATACAACCTGAGTCAACCCCCAGCAATTActttcttcttcttccctctctcttctctcttgctctcaccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13568735 490 - 18804593 tgaaatggttcttccctgctcctcatagcattatcaaaggctgcc--ct---aggggctagaagactcactttcaagatagttcactcacatgactgaagagtatgtgggacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagaggaggagcatggtgggtgggttccaaaagcaagcctcacaagcaaacgaagc-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatactccatatatcaaggaaattacaaagggccacctaggtttatggCACCAAGACACGATTGAA-------CCAGTTCCTA-------AGAAGCTTATAAGATGAGAGAGATTGCAGCACCAGCATGTGCAAAATACAACCTGAGTCAACCCCCAGCAATTActttcttcttcttccctctctcttctctcttgctctcaccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13185548 491 + 18905526 tgaaacggttcttccctgctcctcatagcattatcagaggctgcc--ct---aggggctagaagactcactttcaagatagttcactcagatgactgaagagtacgtgggacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagaggaggaacatggtgggtgggttccaaaagcaagcctcacaagcaaacaaagc-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatacaccatacgtcaagaaaattacaaaggaccacctaggtttatggCACCAAGACACGATTGAA-------CCAGTTCCTA-------AGAAGCTTATAAGATGAGAGAGATTGCAGCACCAGCATGTGCAAAATACAACCTGAGTCAACCCCCAGCAATTActttcttcttcttccctctctcttctctcttgctctcaccatctctctttttatctTTACTGTGTGGATTTA-----TTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60015226 487 - 72318688 tggaatggttcttccctgctcctcatagcattatcaaaggctgcc--ct---aggggctagaagacccactttcaagatagttcactcacatgactgaagagtacgtgagacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagaggaggagcgtggtgggtgggtttcaaaagcaagcctcacaagcaaacaaaac-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatactccatacatcaagaaaattacaaagggccacctaggttTCTGGCACCAAGACATGATGTAA-------CCAGTTCCTA-------AGAAGCTTATAAGATGAGAGAGATTGCAGCACCAGCATGTGCAAAATACAACCTGAGTCAACCCCCAGCAATTAct---ttcttcttccctctctcttctctcttgctctcgccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 349302 481 - 1517660 tggaatggttcttccctgctcctcatagcattatcaaaggctgcc--ct---aggggctagaagacccactttcaagatagttcactcacataactgaaaagtatgtgggacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagagaaggagcatggtgggtgggttccaaaagcaagcctcacaagcaaacgaagc-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatactccatacgtcaagaaaattacaaagggccacctaggtttatggCACCAAGACACGATTGAA-------CCAGTTCCTA-------AGAAGCTTATA---------AGATTGCAGCACCAGCATGTGCAAAATACAACCTGAGTCAACCCCCAGCAATTActttcttcttcttccctctctcttctctcttgctctcgccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3449296 490 + 6513552 tggaatggttcttccctgctcctcatagcattatcaaagcctgcc--ct---aggggctagaagacccactttcaagatagttcactcacatgactgaagagtacatgagacttcagctgtgccagtgggattggcacccatg-gctgactgggcatcctcagaggaggagcatggtgggtgggttccaaaagcaagcctcacaagcaaacaaagc-agaagtgcatgggagtgtatgatctagctttagaagtcacagaacatcaattctagcatactccatacatcaaggaaattacaaagggccacctaggtttatggCACCAAGACATGATGTAA-------CCAGTTCCTA-------AGAAGCTTACAAGATGACAGAGACTGCAGCACCAGCATGTGCAAAATACAACCTGAGTCAACCCCCAGCAATTActttcttcttcttccctctctcttctctcttgctcttgccatctctc-tTTTATCTTTACTGTGTGGATTTA-----TTT i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19416340 492 - 31320352 tggaatgattcttctctgctcctcatagtattattaaagactgcc--ctaacaggggctagaatatccactttca----agctcactcacatgactgaagagtatgtgggacttgaactgtgcccatgggattggcacccatg-gctgactgggcatcctcagagcaggagcatggtgtgtgggttccaaaaacaagcctcacaagaaagcaaagc-agaagtgcatgggaatgtatggtctagcttcagaagtcacagaacatcaattctagcctactccatacatcaaggaaatcacaaagggccacctaggtttaCGATGCCAAGACGTGATGTAA-------CCAGCTCATA-------AGACACATATACAGTGAGAGGTCTTGCAGCACCCACATGTGAAAAATACAATCTGACTCAATCCCCAGCAATTACTTTCTTCTTCCTCCCTCTATTTTCTTCCTTGCTCTTGCCATCTC---TTTTATCTTTACTGTATAGATTTGTTTAATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1611477 487 + 2203405 tggaatgattcttctctgctcctcataatattcttaaaggctgcc--ctaacaggggctagaatatccagtttca----agttcactcacatgactgaagagtacgtgggacttgagctgtgtccatgggattggcgtccatg-gctgactgggcatcttcagagcaggagcatgttgtgtgggttccaaaagcaagcctcacaagaaagcaaagc-agaagtgcatgggagtatatcgtctagcttcagaagtcacagaacatcaattccagcctactccatacatcaaggatatcacaaagggccacctaggtttacgacgccaagacatgatgtaa-------ccagctcata-------agaagcatatgcagtgagaggtcttgcagcacccacatgtgcaaaatacaatctgACTCAATCCCCAGCAATTACTttcttcttcttccctctatcttcttccttgctcttGCCATCTC---TTTTATCTTTACTGTATAGATTTG-----TTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3563289 487 - 14941987 tggaatgattcctctctgctcctcatagcattatgaaaggctgcc--ctaacaggggctagaatatccactttca----agttcactcacatgactgaagagtatatgggacttgagctgtgccaatgggattggctcccatg-gctgactgggcatcctcagagaaggagcatggtgtgtgggttccaaaagcaagcctcacaagaaagcaaagc-agaagtgcatgggagtgtatggtctagcttcagaagtcacagaacatcagttctagcctactccatacatcaaagaaatcacaaagggccacctaggtttaCAACGCCAAGACATGATGTAA-------CCAGCTCATA-------AGAAGCATATACAGTGAGAGGTCTTGCAGCACCCACATGTTCAAAATATAATCTGACTCAATCCCCAGCAATTACTttcttcttcctctctctgtcttcttccttgctcttGCCATCTC---TTTTATCTTTACTGTATAGATTTG-----TTT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 459157 472 - 2150887 tgggatggctcatatctgctccacatagcttcagctgggatggctcact---tggggctggaagatctgctttcaagacggctcacttacatgactaaaaagtttatggaacttcagctggagctgaagag-----gcccatgagctgcctgggcttcctcagag------catcgtgggtgggttccgaaagcaagcctcataggagagcaatgtaagatgtgcatggccttttatggcctagtctagaaagtgacataacttgaattctgtcatactctattcatcaggacaat-gcaaaaggc-atcaaggttgaacacaccaatacttgatataaggagtgtcaagtccatattgcatgaagcacatatgagatgggagatattgttgcaatcatatttgcaaaatacaatctgACCTGATCCTC--CAATTAATACCCTTTTTTCCCCC---------------------ACATCTCTC-TTTCACCTTTATTATACAGATTTT-----TTT i dasNov3.JH575754 C 0 I 3991 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e calJac3.chr13 105224925 0 + 117903854 C e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=7336581.000000 s hg38.chr18_GL383571v1_alt 36293 888 + 198278 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgtaataatccccacatgacatgggagggaatgggtaggaggtaattgaatcatgggggtga-attttttctgt-gctgttcttatgatagtgaataaatcttacaagacctgatggttttataaagaggagtttccccgcacatgctctcttgactgctgccatgtgagatgtgactttgctcctcctttgccttctgtcatgattatgaggcct---ccccagtcatgtggaactgtaagtcaattaaacctctttcctttataaatcacacagtcttgggtatgtctttattagcagcatgatcatggactaatacaCCTACTATCTATTTATAGAAATGAAGTTGGAGAGCTACTGGTTGGGGAGATATGAAAGAAAGAATGTAATAAACAATCAATCCCACAATCCTGGTTATTAGCCACTCACTTCTCCTAATCCATACACTTACCCCAAACTTCTTGGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTTATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATAtttggaagcagacaaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtggcttcatgcacctcaatatatgtaaaatggagataatgatgtatagagcttctgggtgtattaaagaat---tatatagaaaatacttag------------cacgtaagtgcccaataaatggtagctATTCATAATCATTCATTCAAGCATGCATAAGACATTTtatatgtat----acacacac----------------acacacacacatatatatatacat------atagaattatagaatt-a s panTro5.chr18 64992446 880 + 78221452 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgtaataatccccacatgacatgggagggaatgggtaggaggtaattgaatcatgggggtga-attttttctgt-gctgttcttatgatagtgaataaatcttacaagacctgatggttttataaagaggagtttccccgcacatgctctcttgcctgctgccatgtgagatgtgactttgctcctcctttgccttctgtcatgattatgaggcct---ccccagtcatgtggaactgtgagtcaatgaaacctctttcctttataaatcacacagtcttgggtatgtctttattagcagcatgatcatggactaatacaCCTACTATCTATTTATAGAAATGAAGTTGGAGAGCTACTGGTTGGGGAGATATGAAAGAAAGAATGTAATAAGCAATCAATCCCACAATCCTGGTTATTAGCCACTCACTTCTCCTAATCTATACACTTACCCCAAACTTCTTGGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTGATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATAtttggaagcagacaaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtggcttcatgcacctcgatatatgtaaaatggagataatgatgtatagagcttctgggtgtattaaagaat---tatatagaaaa----tag------------cacataagtgcccaataaatggtagctattcataatcattcattcgagcatgcataagacattttatatgtat--------acac----------------acacacacacatatatatatacat------acaGAATTATAGAATT-A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64114849 882 + 77229886 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgtaataatccccacatgacatgggagggaatgggtaggaggtaattgaatcatgggggtga-attttttctgt-gctgttcttatgatagtgaataaatcttacaagacctgatggttttataaagaggagtttccccgcacatgctctcttgcctgctgccatgtgagatgtgactttgctcctcctttgccttctgtcatgattatgaggcct---ccccagtcatgtggaactgtgagtcaatgaaacctctttcctttataaatcacacagtcttgggtatgtctttattagcagcatgatcatggactaatacaCCTACTATCTATTTATAGAAATGAAGTTGGAGAGCTACTGGTTGGGGAGATATGAAAGAAAGAATGTAATAAGCAATCAATCCCACAATCCTGGTTATTAGCCACTCACTTCTCCTAATCTATACACTTACCCCAAACTTCTTGGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTGATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATAtttggaagcagacaaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtggcttcatgcacctcgatatatgtaaaatggagataatgatgtatagagcttctgggtgtattaaagaat---tatatagaaaatacttag------------cacataagtgcccaataaatggtagctATTCATAATCATTCATTCAAGCATGCATAAGACATTTTATATGTAT----------ac----------------acacacacacacatatatatacat------acaGAATTATAGAATT-A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5333970 880 + 17472758 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgtaataatccccacatgacatgggagggaatgggtaggaggtaattgaatcatgggggtga-attttttctgt-gctgttcttatgatagtgaataaatcttacaagacctgatggttttataaagaggagtttccccgcacatgctctcttgcctgctgccatgtgagatgtgactttgctcctcctttgccttctgtcatgattatgaggcct---ccccagtcatgtggaactgtgagtcaattaaacctctttcctttataaatcacaccgtcttgggtatgtctttattagcagcatgatcatggactaatacaCCTACTATCTATTTATAGAAATGAAGTCGGAGAGCTATTGGTTGGGGAGATATGAAAGAAAGAATGTAATAAGCAATCAATCCTACAATCCTGGTTATTAGCCACTCACTTCTCCTAATCCATACACTTACCCCAAACTTCTTGGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTTATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATAtttggaagcagacaaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtggcttcatgcacctcgatatacgtaaaatggagataatgatgtatagagcttctgggtgtattaaagaat---tatatagaaaatacttag------------cacataagtgcccaataaatggtagctAGTcataatcattcattcaagcatgcataagacattttatatgtat----------------------------acacacacacatatatatatacat------acaGAATTATAGAATT-A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139372833 882 - 152096393 AACCAATTTatatggttcagccctgtgtccccac----------gcttgaattgtaataatccccacatgacatgggagggaacgggtaggaggtaattgaatcacgggggtga-attttttctgt-gctgttcttatgatagtgaataaatcttacaagacctgatggttttataaagaggagtttccccgcacatgctctcttgcctgctgccatgtgagatgtgactttgctcctcctttgccttctgtcatgattatgaggcct---ccccagtcacgtggaactgtgagtcaattaaacctctttcctttataaatcacacagtctcgggtatgtctttattagcagcatgatcacggactaatacaCCTACTATCTATTTATAGAAATGAAGTTGGAGACCTATTTGTTGGAGAGATACGAAAGAAAGAACATAATAAGCAATCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCGCAAACTTTTTAGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTTATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATAtttggaagcaggcaaatgggttttaatcttggctctgctatttattaacaatatgtttttagtcagtggcttcatgcacctagatacatgtaaaatagagataatgatatatagagcttctgggtgtattcaagaat---tatatagaaaatactcag------------cacataagtgcccaataaatggtagctATTCATAATCATTCATTCAAGCATGCAGAAGACATTTTatatgtatatacacacacac----------------acacacacacatatatatacacat------aCAGAATTATAGAATT-A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57325177 872 + 70235451 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgcaataatccccacatgacatgggagggactgggtaggaggtaattgaatcatgggggtga-tttttttctgt-gctgttcttatgatagtgaataagtcttacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcct---ccccaggcatgtggaaccgtgagtcaattaaacctctttcctttataaattacacagttccaggtatgtctttattagcagcatgatcatggactaatataCCTACTATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATAAAAAAGAAAGAATGTAATGAGCAGTCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCTCAAACTTCTTGGTATCTTTCATGTTCCTATGGTCACGGTTTAGGTTATCTGTTATTTATTTGCATCCATATACATTCATTTAGATACTATACAAAGAAATATGGCAAAATctttggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtagcttcatgcaccttgatatatgtaaaatagagataataatgtgcagagctcctgtgtgtattaaagaattattatatagaaaatactcag------------cacataagtgccc-ataaatggtaacAATTCATAATCATTCATTCAAGCATACATAAGATATTTTATATG--------------------------------------TATATATACACACTCAC------ACAGAAATATAGAGTT-A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63016550 872 - 75711847 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgcaataatccccacatgacatgggagggactgggtaggaggtaattgaatcatgggggtga-tttttttctgt-gctgttcttatgatagtgaataagtcttacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcct---ccccaggcatgtggaaccgtgagtcaattaaacctctttcctttataaattacacagttccaggtatgtctttattagcagcatgatcatggactaatataCCTACTATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATAAAAAAGAAAGAATGTAATGAGCAGTCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCTCAAACTTCTTGGTATCTTTCATGTTCCTATGGTCACGGTTTAGGTTATCTGTTATTTATTTGCATCCATATACATTCATTTAGATACTATACAAAGAAATATGGCAAAATctttggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtagcttcatgcaccttgatatatgtaaaatagagataataatgtgcagagctcctgtgtgtattaaagaattattatatagaaaatactcag------------cacataagtgccc-ataaatggtaacAATTCATAATCATTCATTCAAGCATACGTAAGATATTTTATATG--------------------------------------TATATATACACACTCAC------ACAGAAATATAGAGTT-A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13569225 872 - 18804593 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgcaataatccccacatgacatgggagggactgggtaggaggtaattgaatcatgggggtga-tttttttctgt-gctgttcttatgatagtgaataagtcttacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcct---ccccaggcatgtggaaccgtgagtcaattaaacctctttcctttataaattacacagttccaggtatgtctttattagcagcatgatcatggactaatataCCTACTATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATAAAAAAGAAAGAATGTAATGAGCAGTCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCTCAAACTTCTTGGTATCTTTCATGTTCCTATGGTCACGGTTTAGGTTATCTGTTATTTATTTGCATCCATATACATTCATTTAGATACTATACAAAGAAATATGGCAAAATctttggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtagcttcatgcaccttgatatatgtaaaatagagataataatgtgcagagctcctgtgtgtattaaagaattattatatagaaaatactcag------------cacataagtgccc-ataaatggtaacAATTCATAATCATTCATTCAAGCATACGTAAGATATTTTATATG--------------------------------------TATATATACACACTCAC------ACAGAAATATAGAGTT-A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13186039 880 + 18905526 AACCAATTTatatggtttggctctgtgtccccacccaaatctcaccttgaattgcaataatccccacatgacatgggagggactgggtaggaggtaattgaatcatgggggtga-tttttttctgt-gctgttcttatgatagtgaataagtcttacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcctcccccccaggcatgtggaaccgtgagtcaattaaacctctttcctttataaattatacagtttgaggtatgtctttattagcagcatgatcatggactaatataCCTACTATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATAAAAAAGAAAGAATGTAATAAGCAGTCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCTCAAACTTCTTGGTATCTTTCATGTTCCTATGGTCACGGTTTAGGTTATCTGTTATTTATTTGCATCCATATACATTCATTTAGATACTATACAAAGAAATATGGCAAAATctctggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtagcttcatgcaccttgatatatgtaaaatagagataataatgtgcagagctcctgtgtgtattaaagaattattatatagaaaatactcag------------cacataagtgcccaataaatggtaacAATTCATAATCATTCATTCAAGCATACGTAAGatattttatatgtat----------------------------------atatatatacacacatgc------acagaaatatagagtt-a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60015713 895 - 72318688 AACCAATTTatatggtttggctctgtgtccccaaccaaatctcaccttgaattgcaataatccccacatgacatgggagggaccgcgtaggaggtaattgaatcatgggggtgattttttttctgt-gctgttcttatgatagtgaataagtcttacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcct---ccccaggcatgtggaaccatgagtcaattaaacctctttcctttctaaattacacagtttcaggtatgtctttattagcagcatgatcatggactaatacaCCTACCATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATAAAAAAGAAAGAATGTAATGAGCAGTCACTCCCACAATCCTGGTTATTAGTCACTCACTTTTCCTAATCCATACACTTACTTCAAACTTCTTGGTATCTTTCATGTTCCTATGGTCACGGTTTAGGTTATCTGTTATTTCTTTGCATCCATCTACATTCATTTAGATACTATACAAAGAAATATGGCAAAATctctggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtggcttcatgcaccttgatatatgtaaaatagagataataatgtgcagagctcctgtgtgtattaaagaattactatgtagaaaatactcag------------cacataagtgcccaataaatggtaacAattcataatcattcattcaagcatatgtaagacattttatatgtat--acacacacac----------------acacacatatatatacacacacac------acaaacatacaGAACTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 349783 879 - 1517660 AACCAATGTatatggtttggctctgtgtccccacccaaatctcatcttgaattgcaataatccccacatgacatgggagagaccgggtaggaggtaattgaatcatgggggcaa-tttttttctgt-gctattcttatgatagtggataagtattacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcct---ccccaggcatgtggaaccatgagtcaattaaacctctttcctttataaattatacagtttcaggtatgtctttattagcagcatgatcatggactaatataCCTACTATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATAAAAAAGAAAGAATGTAATAAGCAGTCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCTCAAACTTCTTGGTATCTTTCATGTTCCTATGGTCACGGTTTAGGTTATCTGTTATTTATTTGCATCCATATACATTCATTTAGATACTATACAAAGAAATATGGCAAAATctctggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttaggcagtagcttcatgcaccttgatatatgtaaaatagagataataatgtgcagagctcctgtgtgtattaaagaattattatatagaaaatactcag------------cacataagtgcccaataaatggtaacAATTCATAATCATTCATTCAAGCATACGTAAGatattttatatgtat--------------------------------atatatatacacataCACGC------ACAGAAATATAGAGTT-A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3449786 899 + 6513552 AACCAATTTatatggtttggctctgtgtccccacccaaatctcacgttgaattgcaataatccccatatgacataggagggaccaggtaggaggtaattgaatcatgggggtga-tttttttctgt-gctgttcttatgatagtgaataagtcttacaagacctgatggttttataaagaggagtttccccacacatgctgtcttgcctgctgccatgtaagatgtgacttttctcctcctttgccttctgtcatgattatgaagcct---ccccaggcatgtggagccatgagtcaattaaacctctttcctttataaattacacagtttcaggtatgtctttattagcagcatgaccatggactaatacaCTTACCATCTATTTATAGAAATGAAGTTGGAGACCTATTGGTTGGGGAGATACAAAAGAAAGAATGTAATGAGCAGTCACTCCCACAATCCTGGTTATTAGCCACTCACTTTTCCTAATGCATACACTTACCCCAAACTTCTTGGTACCTTTCATGTTCCTATGGTCACAGTTTAGGTTATCTGTTATTTCTTTGCATCCATATACATTCATTTAGATGCTATACAAAGAAATATGGCAAAATctttggaagcagataaatgggttttaatcttggctctgctatttattaacaatgtgtttttagtcagtggcttcatgcaccttgatatatgtaaaacagagataataatgtgcagagctcctgtgtgtattaaagaattattatatagaaaatactcag------------cacataagtgcccaataaatggtaacAATTCATAATCATTCATTCAAGCATGCGTAAGACATTTTATATGTAT--acacacacac----------------acacatatatgtatacacacacacacacatacaGAACTATAGAGTT-A i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19416832 922 - 31320352 AACCTATCAatatggtttgg-tctgtgtccccacccaaatctcatcttgaattgtaataatcctcatatgtcatgggagggacaatgtggaaggtaactgaatgatgggggtgagattttttctgt-gctgttcttatgatagtgaataagtcttataagatctgatggttttataaagagaagtttctgggcatatgctctcttacctgctgccatgcaagatatgattttgctcctactttgccttccatcatgattgtgaggcct---ccccagtcatatggaactgtgagtccattgaacctatttcctttataaattatgcagtatcaagtatggcttcattagcagcacaggcccagactaatgcaCCTACCACCTACATATAGAAATGAAGTTGGAGACCTCTTGGTTGGGGAGATACAAAAGAAAGAATGTAATGAGCAATCACTCCCACAATCTTGGTTATTAACCACTCACTTTTCCTAATCCATACACTTCCCCCAAACTTCTTGCTATCTTTCATGTTCCTGTGGTCATGGTTTAGGTTATCTATTATTTCTTTGCATTCATATATATTCATTTAGATAATGTAC-AAGAAATGCTGCAAAATAtttggcagtggacaaatgggttttaatcttggctctgccattcattaacaatgtgcttttagtcagtggcttcatgcacattgatatatgtaaaatcaagataatgatgtgtagagatcctgtgggtattaaataattattatgtagaaaatactcagcatattacctgacacataagtgcccaataaatggtagctATTCATAATCGTTCATTCAAGCAGGCATAAGACATTTTATATGTATacacacacacacacacacatacaaacacacacatacatatacatatatacat------acaGAATCATACAGTT-A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1611964 915 + 2203405 AACCTATCAatatggtttggctctgtgttcccacccaaatctcatcttgaattgcaataatcctcatatgtcatgggagggacaatgtagaaggtaactgaatcatgggggtgagattttttctgt-gctgttcttatgatagtgaataagtcttataagatctggtggttttataaagagaagtttctccacacatggtctcttacctgctgccatgcaagatgtgattttgctcctactttgccttccatcatgattgtgaggcct---ccccagtcatatggaactgtgagtcaattgaacctctttcctttataaattatgcagtatcaggcatggcttcattagcagcccaggcccagactaatgcaCCTATCATCTATACATAGAAATGAAGTTGGAGACCTCTTGGTTGGGGAGATACAAAAGAAAGAATGTAATGAGCAATCACTCCCACAATCTTGGCTTTTAGCCACTCACTTTTCCTAATCCATACACTTACCCCAAACTTCTTGCTATCTTTCATGTTCCTATGGTCATGCTTTAGGTTATCTATTATTTCTTTGCATTCATATATACTCATTTAGATAATATAC-AAGAAATACTGCAAAATAtttggcagcggacaaatgggttttaatcttgactctgctattcattaacaatatgtttttagtcagtggcttcatgcacattgatatatgtaaaatcaagataatgatgtgtagagctcctgtgggtattaaataattactatgtagaaaatactcagcatattacctgacacataagtgcccaataaatggtagctATTCATAATCATTCATTCAAGCATGCATAAGACATTTtatatgtatatgcacacacatacatatat--------atacttatatacacatatatacat------acagaatcataGAGTT-A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3563776 902 - 14941987 AACCTATCAatatggttggggtctgtgtccccacccaaatctcatcttgaattgtaataatcctcatatgtcatgggagggacaatgtagaaggtaactgaatcatgggggtgagtttttttctgtggctggtcttatgatagtgaa-aagtcttataagatctgatggttttataaagagaagtttctccacacatgctctcttacctgctgccatgcaagatgtgattttgctcctactttaccttccatcatgattgcaaggcct---ccccagtcataaggaactgtgagtcaattgaacctctttcctttataaattatgtagtatcaggtatggcttcattagcagcacaggcccagactaatgcaCCTACCATCTATACATAGAAATGAAGTTGGAGACCTCTTGGTTGGGGAGATACAAAAGAAAGAATGTAATGAGCAATCACTCCCACAATCTTGGTTATTAGCCACTCACTTTTCCTAATCCATACACTTACCCCAAACTTCTTGCTATCTTTCATGTTCCTGTGGTCATGGTTTAGGTTATCTATTATTTCTTTGCATTCATATACATTCATTTAGATAATATACAAAGAAATACTGCAAAATAtttggaagtggacaaatgggttttaatcttggctctgctattcattaacaatgtgtttttagtcaatggcttcgtgcaccttgatatatataaaatagagataatgatgtgtagagttcctgtgggtattaaataattattatgtagaaaatactcagcatattacctgacacataagtgcccaataaatggtagctATTCATAGTCATTCATTCAAGCAGGCATAAGACATTTtatatgtatacacac----------------------atacatatatatacatatatacat------acagaatcatagagtt-a i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e calJac3.chr13 105224925 0 + 117903854 C e dasNov3.JH575754 459629 3991 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11209905 101 - 20685099 I a score=2118188.000000 s hg38.chr18_GL383571v1_alt 37181 233 + 198278 taaatGAGCTATTGAGTTTGCATTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATCTTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTATGCTCTGCATGAAGTATTTGcctttcaggaaccagaactttgaaatatacagagtccagatttgata----------tgtaaattcctgaattggttcattaagggtaaggagaagcagagccatttttgcctccacac s panTro5.chr18 64993326 233 + 78221452 TAAATGAGCTATTGAGTTTGCATTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATCTTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTATGCTCTGCATGAACTATTTGCCTTTCACGAACCAGAACTTTGAAATATACAGAGTCCAGATTTGATA----------CGTAAATTCCTGAATTGGTTCATTAAGGGTAAGGAGAAGCAGAGCCATTTTTGCCTCCACAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64115731 233 + 77229886 TAAATGAGCTATTGAGTTTGCATTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATCTTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTATGCTCTGCATGAACTATTAGCCTTTCACGAACCAGAACTTTGAAATATACAGAGTCCAGATTTGATA----------CGTAAATTCCTGAATTGGTTCATTAAGGGTAAGGAGAAGCAGAGCCATTTTTGCCTCCACAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5334850 233 + 17472758 TAAATGAGCTATTGAGTTTGCATTTATGAACCT-GTAGTTAATTAGGGGAGACGATCCTGTAA--CAAATCTTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTATGCTCTGCATGAAGTATTTGcctttcaggaaccagaactttgaaatatacagagtccagatttgata----------tgtaaattcctgaattggttcgttaggggtaaggagaagtagagccatttttgcctccacac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139373715 233 - 152096393 TAAATGAGCTATTGAGTTTGCCTTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATCTTTTCAGACTTTTTG-GGGAGATTTAAAAAAGGGATATGCTCTGCATgaagtatttgcctttcaggaaccagaactttgaaatacaaagagtccagatttgata----------tgtaaattcctgaattggctcattaggggtaaggagaagcagggccatttttgcctccacac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57326049 233 + 70235451 TAAATGAGCTATTGAGTTTGCCTTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAGGGAGTATGCTCTGCATGAAGTATTTGcctttcaggaaccagaactctgaaacacactgagtccagatttgatg----------tgtaaattcctgaactggctcatcaggagtaaggagaagcagagccattcttgcctccacac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63017422 233 - 75711847 TAAATGAGCTATTGAGTTTGCCTTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAGGGAGTATGCTCTGCATGAAGTATTTGcctttcaggaaccagaactctgaaacacactgagtccagatttgatg----------tgtaaattcctgaactggctcatcaggagtaaggagaagcagagccattcttgcctccacac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13570097 233 - 18804593 TAAATGAGCTATTGAGTTTGCCTTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAGGGAGTATGCTCTGCATGAAGTATTTGcctttcaggaaccagaactctgaaacacactgagtccagatttgatg----------tgtaaattcctgaactggctcatcaggagtaaggagaagcagagccattcttgcctccacac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13186919 233 + 18905526 taaatGAGCTATTGAGTTTGCCTTTATGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTATGCTCTGCATGAAGTATTTGcctttcaggaaccagaactctgaaacacacagagtccagatttgatg----------tgtaaattcctgaactggctcattaggagtaaggagaagcagagccattcttgcctccacac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60016608 233 - 72318688 TAAATGAGCTATTGAGTTTGCCTTTATGAACCT-GCAGTTAGTTAGGGGAGATGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTTTGCTCTGCATGAAGTATTTGcctttcaggaacgagaactctgaaacacacagagttcagatttgatg----------tgtaaattcctgaactggctcattaggagtaaggagaagcagagccattcttgcctccatac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 350662 233 - 1517660 TAAATGAGCTATTGAGTTTGCCTTTTTGAACCT-GCAGTTAATTAGGGGAGATGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAGGGGGTTTGCTCTGCATGAAGTATTTGcctttcaggaaccagaactctgaaacacacagagtccagatttgatg----------tgtaaattcctgaactggctcattaggagtaaggagaagcagagccattcttgcctccacac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3450685 233 + 6513552 TAAATGAGCTATTGAGTTTGCCTTTATGAATCT-GCAGTTAATTAGGGGAGATGACCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAAAGGGGTATGCTCTGCATGAAGTTTTTGcctttcaggaatcagaactctgaaacacacagagtccagacttgatg----------tgtaaattcctgaactggctcattaggagtaaggagaagcagagccattcttgcctccacac i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19417754 232 - 31320352 TAAATGAGATATTGAGTTTGCCTTTATGAACCT-ACAGTTAATTAGGGGAGAAGGTCCTATAA--CAAATATTTTCAGACTATTTG-GAGAGATTAAAAAATACTTCATGCTCTGTATGAAGTATTTGcccatcaggaactaaaactttgaaatatgcagagtccagatttgatg----------tgtaaattcctgaattggatcattaggagtga-gagaagcagagccattcctgcctccacgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1612879 232 + 2203405 TAAATGAGGTATTGAGTTAGCCTTTATGAATCT-GCAGTTAATTAGGGGAGAAGGTCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAATACTTCATGCTCTGTATgaagtatttgtctatcaggaactaaaactttgaaacacgcagagtccagatttgatg----------tgtaaattcctgaattggatcattagaagtaa-gagaagcagagccattcctgcctccatgt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3564678 232 - 14941987 taaatgagatatTGAGTTTGCCTTTATGAACCT-GCAGTTAATTAGGGGCGAAGATCCTATAA--CAAATATTTTCAGACTATTTG-GGGAGATTAAAAAATACTTCATGCTATCTATGAAGTATTTGcccatcaggaactaaaactttgaaatatgcagagtccagatttgatg----------tgtaaattcctgaattggatcattaggattga-gagaagcagagccattcctgcctccacgt i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11210006 246 - 20685099 TAAATAATATATTGACGCTGCATTCATTAACCTGGCAATTAATGA-GGAAAATAAGCCTATAAGCCAAAACTTTTCAGACCATTTATGGGTGGTAAAGAGACGAGGTCTGATCTGTGTGAagtgttcgccctttgggaatcaggactttgaagtcggtccagttctgatttgaaagtgtgtgactcgtaaattcctgaacggggtcattgtgaagtaagggaattaggacccttcctgcttccacac i otoGar3.GL873546 I 101 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e calJac3.chr13 105224925 0 + 117903854 C e dasNov3.JH575754 459629 3991 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I a score=6440414.000000 s hg38.chr18_GL383571v1_alt 37414 638 + 198278 tttggtcttggacccatgtattcttcttttcagaagcgcaccct-aaaacaattttaatttgaatttaacgtttctatgtgtgaagatgctgcggcattcttaggaggtattgcctctgagccgacacttcagctgtcactttacaaggctgttccagtgcacttctgattaatgcagggtgcactatgaccagtggattccttagccatgggcccactgtgcccttcctttgccatgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagttacactgtaggccctcagagagtgagacagactcagaccctgcaggaaggtaagtcaaacctcttcccagaacatgtacccatt-ctatcagcatgaaccacca--gaggcctggggagaaggagtccagcgagactaatctgccatctttctttaacatgtgatgtcactttcc-ttaacatagtatgccatactggaagtgcaaagctgctctttgttgatggcaggcttgacatttggtagcgacaccagctggaccaacctagagaggtgagagcccatgctgtcgggcctatgcataacctccacctaagaccctgtattagtc----cattttaatgct-gctgataaag s panTro5.chr18 64993559 638 + 78221452 TTTGGTCTTGGACCTATGTATTCTTCTTTTCAGAAGCACACCCT-AAAACAATTTTAATTTGAATTTAACGTTTCTATGTGTGAAGATGCTGTGGcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaaggctgttccagtgcacttctgattaatgcagggtgcactatgaccagtggattccttagccatgggcccactgtgcccttcctttgccatgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagttacactgtaggccctcagagagtgagacagactcagaccctgcaggaaggtaagtcaagcctcttcccagaacatgtacccatt-ctgtcagcatgaaccacca--gaggcctggggaggaggggtccagtgagactaatctgccatctttctttaacatgtgatgttactttcc-ttaacatagtatgccatactggaagtgcaaagctgctctttgttgctggcaggcttgacatttggtagcaacaccagctggacccacctagagaagtgagagcccatgctgtcgggcctatgcataacctccacctaggaccctgtattagtc----cattttaatgct-gctgataaag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64115964 638 + 77229886 TTTGGTCTTGGACCTATGTATTCTTCTTTTCAGAAGCACACCCT-AAAACAATTTTAATTTGAATTTAACGTTTCTATGTGTGAAGATGCTGTGGcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaaggctgttccagtgcacttctgattaatgcagggtgcactatgaccagtggattccttagccatgggcccactgtgcccttcctttgccatgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagttacactgtaggccctcagagagtgagacagactcagaccctgcaggaaggtaagtcaagcctcttcccagaacatgtacccatt-ctatcagcatgaaccacca--gaggcctggggaggaggggtccagtgagactaatctgccatctttctttaacatgtgatgttactttcc-ttaacatagtatgccatactggaagtgcaaagctgctctttgttgctggcaggcttgacatttggtagcaacaccagctggacccacctagagaagtgagagcccatgctgtcgggcctatgcataacctccacctaggaccctgtattagtc----cattttaatgct-gctgataaag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5335083 638 + 17472758 tttggtcttggacctatgtattctacttttcagaagcacaccct-aaaacaattttaatttgaatttaacgtttctatgtgtgaagatgctgcggcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaaggctgttccagtgcacttctgattaatgcagggtgcactatgaccagtggattccttagccatgggcccactgtgcccttcctttgccatgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagttacactgtagaccctcagagagtgagacagactcagaccctgcaggaaggtaagtcaagcctcttcccagaacatgtacccatt-ctattagcatgaaccacca--gaggcctggggagaaggggtccagtgagactaatctgccatctttctttaacatgtgatgttactttcc-ttaacatagtatgccatactggaagtgcaaagctgctctttgttgctggcaggcttgacatttggtagcgacacgagctggaccaacctagagaggtgagagcccatgctgtcgggcctatgcataacctccacctaggaccctgtattagtc----cattttaatgct-gctgataaag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139373948 637 - 152096393 tttggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaattttaatttgaatttaaggtttctatgtgtgaagatgcaacggcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaagcctgttccagtgcacttctgataaatgc-gggtgcactatgaccagtggattccttagccatgggcccactctgcccctcctttgccatgtgacacctgttggtctgtgtggcatgatgtagaatatcatgcatgtgaatcagttacactataggccctcagagagtgagacagactcagaccctgtgggaaggtaagtcaagtctcttcccagaataggtacccatt-ctatcagcatgaaccaccg--gaggccaggggagaagggatccagtgagaccaatctgccatctttctttaatatgtgatgttactttcc-ttaacatagtatgccatactggaagtgcaaagctgctctttgttgctggcaggcttgacatttggtagcgacaccagctggaccaaccttgagaggtgagagcccatgctgttgggcctaagcataacctccacctaggaccttgtattagcc----cgttttcatgct-gctgataaag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57326282 632 + 70235451 ttgggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaattttaatttgaattttgggtttctatgtatgaagatgctgcggcattcttatgaggtattgcctctgagctgacatttcagctgtcactttacaagactgttccagtccacttctgattaatgcagggtacactatgaccagtgga---tttagccatgggcacactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacactgtaggccctcagagagtgagacagactgagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcatcatgaaccactg--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacacgtgatgttactttcc-ttaatatagtatgccttactggaagtgcaaagctgctctttgttgctggcaggtttgacatttggcagcaacactggctggaccagccttgagaggtgagggcccatgctgtggagcctatgtataacctccacctaggaccctgtattagtc----cactttcacgct-attgat--ag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63017655 632 - 75711847 ttgggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaattttaatttgaattttgggtttctatgtatgaagatgctgcggcattcttatgaggtattgcctctgagctgacatttcagctgtcactttacaagactgttccagtccacttctgattaatgcagggtacactatgaccagtgga---tttagccatgggcacactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacactgtaggccctcagagagtgagacagactgagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcatcatgaaccactg--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacacgtgatgttactttcc-ttaatatagtatgccttactggaagtgcaaagctgctctttgttgctggcaggtttgacatttggcagcaacactggctggaccagccttgagaggtgagggcccatgctgtggagcctatgtataacctccacctaggaccctgtattagtc----cactttcacgct-attgat--ag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13570330 632 - 18804593 ttgggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaattttaatttgaattttgggtttctatgtatgaagatgctgcggcattcttatgaggtattgcctctgagctgacatttcagctgtcactttacaagactgttccagtccacttctgattaatgcagggtacactatgaccagtgga---tttagccatgggcacactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacactgtaggccctcagagagtgagacagactgagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcatcatgaaccactg--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacacgtgatgttactttcc-ttaatatagtatgccttactggaagtgcaaagctgctctttgttgctggcaggtttgacatttggcagcaacactggctgaaccagccttgagaggtgagggcccatgctgtggagcctatgtataacctccacctaggaccctgtattagtc----cactttcacgct-attgat--ag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13187152 632 + 18905526 tttggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaattttaatttgaattttaggtttctatgtatgaagatgctgcggcattcttatgaggtattgcctctgagctgacatttcagctgtcactttacaagactgttccagtccacttctgattaatgcagggtacactatgaccagtgga---tttagccatgggcacactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacactgtaggccctcagagagtgagacagactgagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcatcatgaaccactg--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacatgtgatgttactttcc-ttaacatagtatgccttactggaagtgcaaagctgctctttgttgctggcaggtttgacatttggcagcaacactggctggaccagccttgagaggtgagagcccacgctgtggagcctatgtagaacctccacctaggaccctgtattagtc----cactttcacgct-attgat--ag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60016841 635 - 72318688 tttggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaatttaaatttgaattttaggtttctatgtatgaagatgctgcggcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaaggctgttccagtgcacttctgattaacgcagggtgcactacgaccagtggattctttaaccatgggcccactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacgctgtaggccctcagagaatgagacagactcagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcagcatgaaccactg--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacatgtgatgttactttcc-ttaacatagtatgccttactggaagtgcaaaactgctctttgttgctggcaggtttaacatttggcagcaacaccggctggaccaaccttgagaggtgagagcccatgctgtggagcctatgtataacctccacctaggaccctgtattagtc----cactttcacgct-attgat--ag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 350895 631 - 1517660 tttggtcttggatctatgtattctacttttcagaagcacaccat-aaaacaattttaatttgaattttaggtttctatgtatgaagatgctgcggcattcttatgaggtattgcctctgagctgacatttcagctgtcactttacaagactgttccagtccacttctgattaatgcagggtacactatga-cagtgga---tttagccatgggcacactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacactgtaggccttcagagagtgagacagactgagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcatcatgaaccactg--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacatgtgatgttactttcc-ttaacatagtatgccttactggaagtgcaaagctgctctttgttgctggcaggtttgacatttggcagcaacaccggctggaccagccttgagaggtgagagcccatgctgtggagcctatgtataacctccacctaggaccctgtattaatc----cactttcacgct-attgat--ag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3450918 635 + 6513552 tttggtcttggacctatgtattctacttttcagaagcacaccat-aaaacaatttgaatttgaattttaggtttctatgtatgaagatgctgtggcattcttatgaggtattgcccctgagctgacacttcagctgtcactttacaaggctattccagtgcacttctgattaatgcagggtgcactatgaccagtggattctttagccatgggcccactgtgcccctcctttg-catgtgacacctgttggtctgtgtggtatgatgtagaatatcatgcatgtgaatcagtgacactgtaggccctcagagagtgagacagactcagaccctgcaggaaggtaagtcaagcctcttcccagaatatgtacccatt-ctatcagcatgaaccactt--gaggccaggggagaaggggtccagtgagaccaatctgccatctttctttaacatgtgatgttactttcg-ttaacatagtatgccttactggaagtgcaaagctgctctttgttgctggcaggcttgacatttggcagcaacaccggctggaccaaccttgacagatgagagcccatgctgtggagcctatgtataacctccacctagcaccctatatgagtc----cactttcacgct-attgag--ag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105224925 632 + 117903854 tttggtctcggacccatgtattctatgTTTCAGAAGTACACCATAAAAACAACTTTAATTTAA------GGTTTCTATATATGAAAATGCTTCAGcattcttatgaggtattgcctctgagctgacacttcagctgtcacttcacaaggctgttccagtacccttctagttaatgtagggtgcactatgaccagtggattccttagccatggacccactatgcccctcctttgccaggtgacatctgttggtctgtgtgacatgatgtagaaaatcgtgcatgtaaatcagtta--ctgtaggccctaagagaatgagacagactcagaccttgcaggaaggcaagttaagcttcttcccagagtatgtacccatt-ctatcagcatgaaccactg--gaggccagggaagaagaggtccagtgagaccaatctgccatctttccttaacatgtgatgttactttcctttaacatattatgccatactggaagtgcaaagctgctctttgttgctggcagatttgacatttggcagtgacaccagctggaccaaccttgtgagatgagagcccatgctgttgggcctatgcacaacctccacctaggaccctgtattagtc----tcttttcacact-gccaataagg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19417986 630 - 31320352 tttggtcttggatcaatgcattctatgtttcagaagtacaccataaaaacaactttaatttaa------ggtttctatgtgtgaagatgcttcagcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaaggctgttccagtacccttctagttaatgtagggtgcactacgaccagtggattccttaggcataggcccactatgcccctcctttgccaggtgacatctgttggtctgtgtggcatgatgtag-atatcatgcatgtgaatcagtta--ctgtaggccctcagagaatgagacagactcagaccctgcaggaaggcaagttaagcttcttcccagaatatgtacccatt-ctatcagcatgaaccactg--aaggccagggaagaagaggtccagtgagaccaatctgccaactttccttaaaatgtgatgttattttcc-ttaacatattatgccatactggaagtgcaaagctgctctttgttgctggcaggtttgacatttggcactgacaccagctggaccaaccttgcaagatgagagcccatgctgttggacctatgcataacctccacctaggaccctgtattagtc----tcgtttcacact-gtcaataaag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1613111 631 + 2203405 tttggtgttggatctatgtagtctacgtttcagaagtacaccataaaaacaactttaatttaa------ggtttctatgtgtgaagatgcttcagcattcttatgaggtattgcctctgagctgacacttcagctgtcactttacaaggctgttccagtacccttctagttaatgtagggtgcactatgaccagtggattccttagccatgggcccactatgcccttcctttgccaggtgacatctgttggtctgtgtggcatgatgtagaatatcatgcatgtgaatcagtta--ctgtaggccctcagagaatgagacagactcagaccctgcaagaaggaaaattaagcttcttcccagaatatgtacccatt-ctatcagcatgaaccactg--gaggccagggaagaagagggccagtgagaccaatctgtcatctttccttaaaatgtgatgttattttcc-ttaacatattatgccatactgaaagtgcaaagctgctctttgttgctggcaggtttgacatttggacccgataccagctggaccaaccttgcaagatgagagcccatgctgttgggcctatgcataacctccacctaggaccctgtattagcc----tcttttcacact-gccaataaag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3564910 631 - 14941987 tttggtcttgaatctatgtattctacatttcagaagtacaccataaaaacaactttaatataa------ggttgctatgtatgaagatgcttcagcattcttatgaagtatcgcctctgagctgacacttcagctgtcactttacaaggctgttccagtacccttctagttaatgcagggtgcactatgaccagtggattccttagccatgggcccacaatgccccccctttgccaggtgacatctgttggtctctgtggcatgatgtagaatatcacacatgtgaatcagtta--ctgtaggccctcagagaatgagacagactcagaccgctcaggaaggcaagttaagtttcttcccagaatatgtacccatt-ctatcagcatgaaccactg--gaggccagggaagaagaggtccagtgagaccaatctgccatctttccttagaatgtgatgttactttcc-ttaacattttatgccatactggaagtgcaaagctgctctttgttgctggcaggtttaacatttggcagcgacaccagctggaccaaccttgtgagatgagagcccatgctgttgggcctatgcataacctccacctaggaccctgtattagtc----tcttttcacact-gccgataaag i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11210252 594 - 20685099 ttcggcctcagac----gcatttcacatatcagaaatgcaactt---tatagtggtggttttgatgtgaagtttgtattt-----gatcctgcagcgtccttctaagctgcagtttctgagctgatacgtcagctctccctttaacagcgtgttctgaggcacttgctcttggtgcactgtgtgttgtaaccagccggttccatggcc-tgggcccagtgtgcacctctgt---------atatctgc-------tgtgggggcatgtggagacctatggatgtgagtcagctacgctgtgagccctcagatgttgccacagactgaggccctgcaggatggtagggtaagtccattcctacagtatgtgtctgttcctactggaatggatccctaccccttccagggtagaaggggtccagtaagatc----------ccttc------------tgttattttcc-ttgacatactaagccatactagaaatgcaaagttgctctttgtttctggcaagcttgacgtgtggaaatgagactagctcgacccaactc-agagctgagagcccttgtagt-gggccttggcataacctccactcatgaccccatagaggccacctcgtttgtgtgctcactgagaaag i otoGar3.GL873546 C 0 I 511 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I a score=10294502.000000 s hg38.chr18_GL383571v1_alt 38052 1095 + 198278 acatacctgagaccgggcaatttacaaaagaaagaggcttaattggatttacagttccacatggctggagaggcctcacaatcatggcagaagacaaggaggaataagtcacatcttatgtggatggtggcaggcaa----aaac----aaacaaacaaacaa------------------------agcttgtgcagggaaattccaccttataaatccatca-gatctcatgagacttattcactatcacaagaatagtgacgtcaatgcctgcccccat--aattcaatcacctcccattgggtccctcccacaacatgtgggaattcaagatgagatttgggtggggtcacagccaaaccatatcagaccccatatgtgctacttcattcctgtgctcattgagaaagcaatggaatggccaataacagaggctgggtgacatgttctggctgagtcattttggtctatgtggttgtgttatgactcctccgtgccaactgttttttggtggttaccatgaaatattaatatccttatgctttgtgcttactctcgtatgtctaaacatgtgcctctcctctagaccttctaagctaatatggctctactctagacctccttagccctccaggcttctaatcagctggacaggcttttagcaggtggcgatttgatatacattctaacctcaggccatttttcattgtatgccaagtggaatactacttgaagctctgcccacaggcgggacttttttctaatcactgtctttcaaggtcacccctgaggcggactggggtgcacctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggacccccattgcaattataggtttgaacccagggaggggcactaattcctcagtagtagatgatacagagtctgggctacctggttttgaacgttgtttatgcttgcaagtcctgcttatgcccattttcatcttaaaaagaattgttgcaaggccctgcaactgtatgactgagtgggtctgagaaaatccagtttatgattggcagctctgattatatggtcacttg s panTro5.chr18 64994197 1095 + 78221452 acatacctgagactgggcaatttacaaaagaaagaggcttaattggatttacagttccacatggctggagaggcctcacaatcatggcagaaggcaaggaggaataagccacatcttatgtggatggtggcaggcaa----aaac----aaacaaacaaacaa------------------------agctcatgcagggaaattccaccttataaatccatca-gatctcatgagacttattcactatcacaagaatagtgacgtcaatgcctgcccccat--aattcaatcacctcccattgggtccctcccacaacatgtgggaattcaagatgagatttgggtggggtcacagccaaaccatattagaccccatatgtgctacttcattcctgtgctcattgagaaagcaatggaatggccaataacagaggctggctgacatgttctggctgagtcattttggtctatgtggttgtgttatgactcctccgtgccaactgttttttggtggttaccatgaaatattaatatccttatgctttgtgcttactctcgtatgtctaaacatgtgcctctactctagaccttctaagctaatatggctctactctagacctccttagccctccaggcttctaatcagctggctaggcttttagcaggtggcgatttgatatacattctaccctcaggccatttttcattgtatgccaagtggaatactacttgaagctctgcccacaggcgggacttttttctaatcactgtctttcaaggtcacccctgaggcggactggggtgcacctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggacccccattgcaattataggtttgaacccagggaggggcactagttcctcagtagtagatgatacagggtctgggctacctggttttgaatgttgtttatgcttgcaagtcctgcttatgcccattttcatcttaaaaagaattgttgcaaggccctgcaactgtatgactgagtgggtctgagaaaatccagtttatgattggcagctctgattatatggtcacttg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64116602 1095 + 77229886 acatacctgagactgggcaatttacaaaagaaagaggcttaattggatttacagttccacatggctggagaggcctcacaatcatggcagaaggcaaggaggaataagtcacatcttatgtggatggtggcaggcaa----aaac----aaacaaacaaacaa------------------------agctcatgcagggaaattccaccttataaatccatca-gatctcatgagacttattcactatcacaagaatagtgacgtcaatgcctgcccccat--aattcaatcacctcccattgggtccctcccacaacatgtgggaattcaagatgagatttgggtggggtcacagccaaaccatattagaccccatatgtgctacttcattcctgtgctcattgagaaagcaatggaatggccaataacagaggctggctgacatgttctggctgagtcattttggtctatgtggttgtgttatgactcctccgtgccaactgttttttggtggttaccatgaaatattaatatccttatgctttgtgcttactctcgtatgtctaaacatgtgcctctactctagaccttctaagctaatatggctctactctagacctccttagccctccaggcttctaatcagctggccaggcttttagcaggtggtgatttgatatacattctaccctcaggccatttttcattgtatgccaagtggaatactacttgaagctctgcccacaggcgggacttttttctaatcactgtctttcaaggtcacccctgaggcggactggggtgcacctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggacccccattgcaattataggtttgaacccagggaggggcactagttcctcagtagtagatgatacagggtctgggctacctggttttgaatgttgtttatgcttgcaagtcctgcttatgcccattttcatcttaaaaagaattgttgcaaggccctgcaactgtatgactgagtgggtctgagaaaatccagtttatgattggcagctctgattatatggtcacttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5335721 1099 + 17472758 acatacctgagactgggcaatttacaaaagaaagaggcttaattggatttacagtcccacatggctggagaggcctcacaatcatggcagaaggcaaggaggaataagtcacatcttatgtggatggtggcaggcaa----aaacaaataaacaaacaaacaa------------------------agctcgtgcagggaaattccaccttataaatccatca-gatctcattagacttattcactatcacaagaatagtgacgtcaatgcctgcccccat--aattcaatcacctcccattgggtccctcccacaacatgtgggaattcaagatgggatttgggtggggtcacagccaaaccgtatcagaccccatatgtgctacttcattcctgtgctcattgagaaagcaatggaatggccaataacagaggctggctgacgtgttctggctgagtcattttggtctatgtcgttgtgttatgactcctctgtgccaactgttttttggtggttaccatgaaatattaatatccttatgctttgtgcttactctcgtatgtctaaacatgtgcctctactctagaccttctaagctaatatggctctactctagacctccttagccctccaggcgtctaatcagctggccaggcttttagcaggtggcgatttgatatacattctaacctcaggccatttttcattgtatgccaagtggaatactacttgaagctctgcccacaggcgtgacttttttctaatcactgtctttcaaggtcacccctgaggcagactggggtgcacctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggacccccattgcaattataggtttgaacccaaggaggggcactagttcctcaacagtagatgatacagggtctgggctacctggttttgaaccttgtttaagcttgcaagttctgcttatgcccattttcatcttaaaaagaattgttgcaaggccctgcaactgtatgactgagtgggtctgagaaaatccagtttatgattggcagctctgattatatggtcacttg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139374585 1090 - 152096393 acatacctgagactgggcaatttacaaaagaaagaggcttaattggatttacagttctacatggctggagaggcctcatgatcatggcagaaggcaaggaggaataaatcacatcttacgtggatggtggcaggcaa------------aaacaaacaaaaaa------------------------agctcgtgcagggaaattccaccttataaagccatca-gatctcacgagacttattcactatcatgagaacagtgcagtaaatgcccgcccccat--aattcgaacgcctcccatcaggtccctcccac-acatgtgggaattcaagatgagatttgggtggggtcacagccaaaccatatgagaccccatatgtgctacttcattcctgtactcattgagaaagcaatggagtggccaatggcagaggctggctgacaggatctggctgagtcattttggtctatgtggttgtgttatgcctcctgtgtaccagctgttttttggtgtttatcatgaaatattaatatctttatgctttgtgcttactgtcatatgtttaaacatgtgcctctactctagaccttctaagctaatatggctctactctagacctccttagccctccaggcttctaatcagctggccaggcttttagcaggtggtgatttgatatacattctaacctcaggccatttttcattgtatgccaagtggaataatacttgaagctctgcccacaggcaggacttttttataatcaccgtcttgaaaggtcacccctgaggcagactggggtacacctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaaactccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttcccaggcaggggcactagttcctcagtagtagatgagatagggtctgggctacctggttttgaaacttgtttatgcttgcaagtcctgcttatgcccattttcatcttaagaagaattgttgcaagaccctgcaactgtatgagtgagtgggtctgagaaaatccagtttatgattggcagctgtgattatatggtcacttg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57326914 1097 + 70235451 acataccagagcctgggcaatttacaaaagaaagaggcttaattggacttacagttccacatggccggggagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttacgtgaatggcggcaggcaaaaacaaac----aaacaaacaaaaag------------------------agcttgtgcagggaaactccaccttataaagccatca-gatctcatgagacttattcactatcacgagaacagtgaactcaatattcacccccat--aattcaatcactgcccactgggtccctcccacaac-tgtgggaattcaagatgagatttgggtggggacacagccaaaccatatcagaccccatatgtgctatttcattcctgtgctcattgagaaagcaatgaaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgtggttatgttatgcctcctttgtaccagttgttttttggtggttatcatgaaatattaatatctttatgctttgtgtttactctcatatgtctaaacatatgcctctactctagacagcctaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgacacacatgcaaacctcaggccatgtttcattgtacaccaggtggaatactgcttgaagctctgcccacaggcaggacttttttcttatcactgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctaaactgcacctgcattctatgatgagccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcaggcaggggcacaagctccttagtagtagatgatatagggtctggtctacctggttgtgaaccttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccttgcaactgtatgactgagtggatctgagaaattccagtttgtgattggcagctctgattatatggtcacttg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63018287 1097 - 75711847 acataccagagcctgggcaatttacaaaagaaagaggcttaattggacttacagttccacatggccggggagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttacgtgaatggcggcaggcaaaaacaaac----aaacaaacaaaaag------------------------agcttgtgcagggaaactccaccttataaagccatca-gatctcatgagacttattcactatcacgagaacagtgaactcaatattcacccccat--aattcaatcactgcccactgggtccctcccacaac-tgtgggaattcaagatgagatttgggtggggacacagccaaaccatatcagaccccatatgtgctatttcattcctgtgctcattgagaaagcaatgaaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgtggttatgttatgcctcctttgtaccagttgttttttggtggttatcatgaaatattaatatctttatgctttgtgtttactctcatatgtctaaacatatgcctctactctagacagcctaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgacacacatgcaaacctcaggccatgtttcattgtacaccaggtggaatactgcttgaagctctgcccacaggcaggacttttttcttatcactgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctaaactgcacctgcattctatgatgagccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcaggcaggggcacaagctccttagtagtagatgatatagggtctggtctacctggttgtgaaccttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccttgcaactgtatgactgagtggatctgagaaattccagtttgtgattggcagctctgattatatggtcacttg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13570962 1097 - 18804593 acataccagagcctgggcaatttacaaaagaaagaggcttaattggacttacagttccacatggccggggagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttaagtgaatggcggcaggcaaaaacaaac----aaacaaacaaaaag------------------------agcttgtgcagggaaactccaccttataaagccatca-gatctcatgagacttattcactatcacgagaacagtgaactcaatattcacccccat--aattcaatcactgcccactgggtccctcccacaac-tgtgggaattcaagatgagatttgggtggggacacagccaaaccatatcagaccccatatgtgctatttcattcctgtgctcattgagaaagcaatgaaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgtggttatgttatgcctcctttgtaccagttgttttttggtggttatcatgaaatattaatatctttatgctttgtgtttactctcatatgtctaaacatatgcctctactctagacagcctaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgacacacatgcaaacctcaggccatgtttcattgtacaccaggtggaatactgcttgaagctctgcccacaggcaggacttttttcttatcactgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctaaactgcacctgcattctatgatgagccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcaggcaggggcacaagctccttagtagtagatgatatagggtctggtctacctggttgtgaaccttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccttgcaactgtatgactgagtggatctgagaaattccagtttgtgattggcagctctgattatatggtcacttg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13187784 1096 + 18905526 acataccggagactgggcaatttaccaaagaaagaggcttaattggacttacagttccacatggcc-gggagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttacgtgaatggcggcaggcaaaaacaaac----aaacaaacaaaaag------------------------agcttgtgcagggaaactccaccttataaagccatca-gatctcatgagacttattcactatcacgagaacagtgaagtcaatattcacccccat--aattcaatcactgcccactgggtccctcccacaac-tgtgggaattcaagatgagatttgggtggggacacagccaaaccatatcagaccccatatgtgctatttcattcctgtgctcattgagaaagcaatgaaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgtggttatgttatgcctcctttgtaccagttgttttttggtggttatcatgaaatattaatatctttatgctttgtgtttactctcgtatgtctaaacatatgcctctactctagacagcctaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgacacacattctaacctcaggccatgtttcattgtacaccaggtggaatactgcttgaagctctgcccacaggcaggacttttttcttaccactgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcagggaggggcacaagctccttagtagtagatgatatagggtctggtctacctggttgtgaactttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccctgcaactgtacgactgagtggatctgagaaattccagtttgtgattggcagctctgattatacggtcacttg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60017476 1095 - 72318688 acataccggagactgggcaatttacaaaagaaagaggcttaattggacttacagttccacatggccggggagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttacgtggatggcggcaggcaa----aaac----aaacaaacaaaaag------------------------agcttgtgcagggaaactccaccttataaagccatca-gatctcatgagacttattcactatcatgagaacagtgacgtcaatgctcgcccccataaaattcaatcactgcccactgggtccctcccacaac-tgtgggaattcaagatgagatttgggtggggacacagccaaactatatcagaccccatatgtgttatttcattcctgtgctcattgagaaagcaatggaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgtggttgtgttatgcctcctttgtaccggttgttttttggtggctatcatgaaatattaatatctttatgctttgtgtttactctcgtatgtctaaatatatgcctctactctagacagcaaaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgatacacattctaacctcaggccatgtttcattgtacaccaggtggaatactgcttgaaactctgcccacaggcaggacttttttcttatcactgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctaaactgcacctgcattctatgatgatccgtctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcagggaggggcacaagttccttagtagtagatggtatagggtctggtctacctggttgtgaaccttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccctgcaactgtatgactgagtggatctgagaaattccagtttgtgattggcagctctgattatatggtcacttg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 351526 1095 - 1517660 acataccggagactgggcaatttaccaaagacagaggcttaattggacttacagttccacatggccggcgagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttacgtggatggcggcaggcaa----aaac----aaacaaacaaaaag------------------------agcttgtgcagggaaactccaccttataaagccatca-gatctcatgagacttactcactatcacgagaacagtgaagtcagtgctcgccgccataaaattcaatcactgcccactgggtccgtcccacaac-tgtgggaattcaagatgagatttgggtggggacacagccaaactatatcagaccccctatgtgctatttcattcctgtgctcattgagaaaacaatggaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgaggttgtgttatgcctcctttgtaccagttgttttttggtggttatcatgaactattaatatctttatgctttgtgtttactctcgtatgtctaaacatatgcctctactctagacagcctaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgacacacattctaacctcaggccatgtttcattgtacaccaggtggaatactgcttgaagctctgcccacaggcaggacttttttcttatcactgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctaaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcagggaggggcacaagctccttagtagtagatgatatagggtctggtctacctggttgtgaaccttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccctgcaactgtacgactgagtggatctgagaaattccagtttgtgattggcagctctgattatatggtcacttg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3451553 1089 + 6513552 acataccagagactgggcaatttacaaaagaaagaggctaaattggacttacagttccacgtggccggggagacctcacaatcatggcagaaggcaaggaggagtaagtcacatcttacgtggagggtggcaggcaa------------aaacaaacaaaaag------------------------agcttgcacagggaaactctaccttataaagccatca-gatctcatgagacttattgactatcacgagaacagtgaagtcaatgctcgcccccat--aattcaatcactgcccactgggtccctcctacaac-tgtgggaattcaagatgagatttgggtggggacacagccaagccatatcagaccccatatgtgctatttcattcctgtgctcattgagaaagcaatggaatggccaatgacagagactggctgacatgatctggctgagtcattttgttctatgtggttgtgttatgcctcctttgtaccagttgttttttggtggttatcatgaaatattaatatctttatgctttgtgtttactctcgtatgtctaaacatatgcctctactctagacagcctaagctaatat-gctctactctagacctccttagccctccaggcttctaatcagctggtcaggcttttagcaggttttgatttgatacacattctaacctcaggccatgtttcattgtacagcaagtggaatactgcttgaagctctgcccacaggcaggacttttttctaatcgctgtctctcaaggtcacccctgaggcaggctggggttcatctgtcatccatttctgaactgcacctgcattctatgatgatccatctgtgaacaaagctccatgtttccctcctttggctgctgccataagggatccccattgcaattataggtttgttttcagggaggggcactagttcctcagtagtagatgatatagggtctggtctacctggttgtgaactttgtttatgctttcaagtcctgcttatgcccattttcattttaaaaagaattgttgcaaggccctgcaactgtatgaccgagtggatctgagaaattccagtttatgattggcagctctgattatatggtcacctg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105225557 1066 + 117903854 acatgcccaagattgggaaatttacaaaagaaagaggcttaattgaactt--------acat-gcta-ggaggcctcacaatgatggcagaaggcaaagaggagtaagtcacatcttacatggatggtggcaggcaa----aaaa----aaaagg--------------------------------agcttgtacagggaaacttcaccttataaatccattgttatctcatgagacttattcactattatgagaacagtgcagtaaatgcccactcctat--aagccaatcacctccgaccaggtccctcccacaacacatgggaattccagatgagatttgggtggggacatagccaaaccacatcagattccatatgtgatacttcattcctgttcttactgagaaagcaatggagtggtcaatgacagaggctggctgacatgatcttgctcagtcattttggtctatgtggttgtgtcatgcctcctctgtaccagctgttatttggtcgttatcatgaaatattaatatctctatgctttgtacttactctcatatgtctgaacatatgtttctactctagacctcgtaagttaatatgcctctagtctaaacctcctaagccctccaggcttctaatcagct------gc-attcacaggtg---atttgatataaattcttaccttgggccattttctgttctacacaaagtggaatactacttgaaggtctgttcacaggcaggattttttctcatcaactatctttcaaggtcacccctgaggcagactgagatacacctatcatccatttccaaactgcacctgcattctgtgatgaactttctgtgaacaaagctccatgtttccctccttt-gttgctgccgtaagggattcccattgcaatgataggtttgtttccaggaaggggcactagttcctcagcagtggctaatgtagggtctgggctacctggttgtgaaccttgtttatgcctccaagtcctgcttatgctca-tttcatcttaaaaggaaatgttgcaagaccctgcaactgtgtgactgagtagctctgagaaaatccagtttatgattggcaactttaattatatgatcacttg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19418616 1112 - 31320352 acatatccaagactgggaaatttacaaaagaaagaggcttaattgaacttacagttccacat-gctatggaggcctcgtaatcatggcagaaggcaaagaggagtaagtcacatcttacatggatggtggcaggcaa----aaaa----aaaaaaaaaaaaaaaaggagcttgtacagggaaacttcagcttgtacagggaaacttcaacttataaagccatag-tatctcatgagacttattcactatcatgagaacagtgcagtaaatgcccatgcctat--aagtcaatcacctcccaccaggtccctcccacaacacgtgggaattccagatgaaatttgggtgaggacacagccaaaccacatcagatcccatacgtgctacttcattcctgttcttattgagaaagtaatggagtggtcaatgacagaggctagctgacaagatcttgctcggtcattttgatctacgtggt--tgtcgtgcctccactgtaccagcttttatttggtggttatcatgaaatattaatatctctatgctttgtacttactctcatatgtctgaacatatgcttctactctagacctcataagctaatatgcctctagtctaaacttcctaagccctccaggcttctaatcagctggccaagc-tttagcaggtggcaatttgatatacattcttacctcaggccattttctgttct-cacaaagtggaatactacttgaagctctgtccacagacaggattttttcttatcaactatctttcaaggtcactcctgaggcagactggggtacacctatcatccatttct-aactgcacctgcattctgtgatgatctatctgtgaacaaagctccatgtttctctccttt-gctgctgctgtaagggatccccattgcaattacaggtttgtttccaggaaggggcactagttcctcagcagtagctcatatagggtctgggctagctgattgtgaaacttgtttatgcttccaagtcctgcttatgctcattttcatcttaaaaagaaatcttgcaaggccttgcaactgtatgactgagtgggtctgagaaaatccagtttataattggcagctttaattatatgatcacttg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1613742 1085 + 2203405 acatatccaagactgggaaatttacaaaggaaagaggcttaattgaacttacagttccacat-gctagggaggcctcacaatcatggaagaaggcaaagaggagtaagtcacatcttacatggatggcggcaggcaa----aaaa----caaaagg-------------------------------agcttgtacagggaaacttcaccttataaagccatcg-tatctcatgagacttattcactatcatgagaacagtgcagtaaatgcccacccctat--aagtcaatcacctcccaccaggtccctcccacaacacatgggaattccagatgagatttgggtggggacacagccaaaccacaccagatcccatacatgctacttcattcctgttcttattgagaaagcaatggagtggtcaatgacagaggctggctgacatgatcttgctcgatcattttggtctacgtggttgtgtcatgcctcccctgtatcagcttttatttggtggttatcatgaaatattaatatctctatgctttgtacttactctcatatgtctgaacatatgcttctactctagacctcgtaagttaatatgcctctagtctaaacctcctaagcccttcaggcttctaatcagctggccaaac-tttagcaggtggcaatttgatatacattcttacctcaggccattttctgttctacccaaagtggaatactacttgaagctccgttgacaggcaggattttttctcatcaactatctttcaaggtcacccctgaggcggactggggtacacctatcatccattcctaaactgcacctgcattctgtgatgatctatctgtgaacaaagctccatgtttccctccttt-gctactacgataagggatccccattgcaattacaggtttgtttccaggaaggggcactagttcctcagcagtagctgatgtagggtctgggctacccggttgtgaaccttgtttatgcttccaagtcctgcttatgctcattttcatcttaaaaagaaatcttgcaaggccctgcaactgtgtgactgagtgggtctgagaaaatccagtttatgattggcagctttaattatatgttcacttg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3565541 1087 - 14941987 acacacccaagactgggaaatttacaaaagaaagaggcttaattgaacttacagttccacat-gctagggaggcctcacaatcatggcagaaggcaaagaggagtaagtcacatcttacatagatggtggcaggcaa----aaaa----aaaaaaagg-----------------------------agcttgtacagggaaacttcaccttataaagccatcg-tatctcaggagacttattcactatcatgagaacagtgcagtaaatgcccacccctat--aagtcaatcacctcccaccaggtccctcccacaacacatgggaattccagatgagatttgggtggggacacagccaaaccacatcagatcccatacgtgctacttcattcctgttcttattgagaaagcaatggagtggtcaatgacagaggctggctgacatgatcttgctcggtcattttggtctatatggttgtgtcatgcctcttctgtaccagctgttatttggtggttatcatgaaatattaatatctctatgctttgtacttactctcatatgtctgaacatatgcttctactctagacctcgtaagctaatatgcctctaatctaaacctcctaagccctccaagcttctaataagttggccaagc-tttagcaggtggtgatttgatatacattcttatctcaggccattttatgttctacacaaagtggaatactacttgaagctctgtccacaggcaggattttttctcatcaactatcttttgaggtcacccctgaggcagactggggtacacctatcatccatttctaaactgcacctgcattctgtgatgatctatctgtgaacaaagctccacatttccctccttt-gctgctgccataagggatccccattgcaattataggtttgtttccaggaaggggcactagctcctcagcagtagctgatgtagggtcggggctacctggttgtgaaccttatttatgcttccaagtcctgcttatgctcattttcatcttaaaaagaaatgttgcaaggccctgcaactgtatgactgagtgggtctgagaaaattcagtttatgattggcagctttaattataaggtcacttg i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I e canFam3.chr1 10398921 0 + 122678785 I e otoGar3.GL873546 11210846 511 - 20685099 I a score=1442539.000000 s hg38.chr18_GL383571v1_alt 39147 138 + 198278 atgtcctgtagtcatatatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtgtgtaa-tttttgactgcagat---atgttctaggtcaaaaaaccctcctggttgatactgtgattattct- s panTro5.chr18 64995292 138 + 78221452 atgtcctgtagtcatatatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtgtgtaa-tttttgactgcagat---atgttctaggtcaaaaaaccctcctggttgatactgtgattattct- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64117697 138 + 77229886 atgtcctgtagtcatatatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtgtgtaa-tttttgactgcagat---atgttctaggtcaaaaaaccctcctggttgatactgtgattattct- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5336820 137 + 17472758 atgtcctgtagtcttatatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtatgtaa--ttttgactgcagat---atgttctaggtcaaaaaaccctcctggttgatactgtgattattct- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139375675 141 - 152096393 atgtcttgtagtcaaatatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtgtataa-tttttgactgcagatatcatgttctaggttaaaaaaccctcctggttgatactgtgattattcg- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57328011 141 + 70235451 atgtcctgtagtcaaagatctctgtctttcccagggttcaatagcatgctaggaactatt------ttgcaaaaggtgtataa-ctttttactgcagatatcatgttctaggtcaaaaaaccctcctggttgatactgtgattatctg- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63019384 141 - 75711847 atgtcctgtagtcaaagatctctgtctttcccagggttcaatagcatgctaggaactatt------ttgcaaaaggtgtataa-ctttttactgcagatatcatgttctaggtcaaaaaaccctcctggttgatactgtgattatctg- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13572059 141 - 18804593 atgtcctgtagtcaaagatctctgtctttcccagggttcaatagcatgctaggaactatt------ttgcaaaaggtgtataa-ctttttactgcagatatcatgttctaggtcaaaaaaccctcctggttgatactgtgattatctg- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13188880 141 + 18905526 atgtcctgtagtcaaagatctctgtctttcccggggttcagtagcatgccaggaactatt------ttgcaaaaggtgtataa-ctttttactgcagatatcatgttctaggtcaaaaaaccctcctggttgatactgtgattatctg- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60018571 141 - 72318688 atgtcctgtagtcaaagatctctgtctttcccagggttcaatagcatgccaggaactatt------tcgcaaaaggtgtataa-ctttttactgcagatatcatgttctaggtcaaaaaaccctcctggttgatactgtgattatctg- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 352621 141 - 1517660 atgtcctgtagtcaaagatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtgtataa-ctttttactgccgatatcatgttctaggtcaaaaaaccctcctggttgatactgtgattatctg- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3452642 141 + 6513552 atgtcccgtagtcaaagatctctgtctttcccagggttcaatagcatgccaggaactatt------ttgcaaaaggtgtataa-ttttttactgcagatatcacgttctaggtcaaaaaaccctcctggttgatactgtgattattta- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105226623 142 + 117903854 atgtcctgtagtcaaagatctctgtcttttccagggttcaatagcatgccaggagctatt------ttgcaaaaggtgtataacttttttactgcagatatcatgttctaggtcaaaaaaccctcgtggttaatactgtgattatttg- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19419728 141 - 31320352 atgtcctagagtcaaagatctctgtcttttccagggttcaacagtatgccaggagctatt------ttgcaaaaggtgtataa-ttttttactgcagatatcatgttctaggtcaaaaaaccctcctggttaatagtgtgattatttg- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1614827 141 + 2203405 atgtcctatagtcaaagacctctgtctttcccagggttcaatagcatgccaggagctatt------ttgcaaaaggtgtataa-ttttttactgcagatatcatgttctaggtcaaaaaaacctcctggttaatactgtgattatttg- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3566628 135 - 14941987 atgtcctatagtcaaagatctctgtctttcccagggttcaata----gccaggagcta-t------ttgcaaaaggtgtataa-ttttttactgcagatatcatgttctaggtc-aaaaaccctcctggttaatactgtgattatttg- i aotNan1.NW_018502140v1 C 0 I 320 s canFam3.chr1 112280888 144 - 122678785 ATGCCACATGGCCAAAAATCTTTGATTCTTCCCAggcccagcaacatggcaagaactatttttttctttcaaaaggtactcaa-ctct--attgtggatgtcacgttctaaatc--aaaactctcatgatccatgctgtgatttattcc i canFam3.chr1 I 4928 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I e otoGar3.GL873546 11210846 511 - 20685099 I a score=3452367.000000 s hg38.chr18_GL383571v1_alt 39285 329 + 198278 attagatttttctataaactacatatgttatctcttctcatcactgatagc-tttaatagcatagagt-cat-ctatacagccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctgaaagccgaaagcttttaatgtcacctagtgtacaggttggga--cac---tct---taaaggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtgggaagttgaagatgcaataatttatcctttactCTCCTTGGTCAAAACAGTCAGATTATC--TGTTTCACC--------------------------------------ACGTATTCA s panTro5.chr18 64995430 331 + 78221452 attagatttttctataaactacatatgttatctcttctcatcactggtagt-tttaatagcgtagagt-cat-ctatacagccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctgaaagccaaaagcttttaatgtcacctagtgtacaggttggga--cac---tct---taaaggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtgggaagttgaagatgcaataatttatccttcactCTCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64117835 331 + 77229886 attagatttttctataaactacatatgttatctcttctcatcactggtagt-tttaatagcgtagagt-cat-ctatacagccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctgaaagccaaaagcttttaatgtcacctagtgtacaggttggga--cac---tct---taaaggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtgggaagttgaagatgcaataatttatccttcactctCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5336957 330 + 17472758 attagatttttctataaactacatatgttatctcttctcatcactggtagc-tttaatagcatagagt-cat-ctatacag-cccagcagctgtccagacctgccacagagtacatctgcatctgggctcca-------ctgaaagccgaaagcttttaatgtcacctagtgtacaggttggga--cac---tct---taaaggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtgggaagttgaagatgcaataatttatcctttactctCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139375816 331 - 152096393 attagatttttctataaactacctatgttatctcttctcatcactgatagc-tttaatagcatagggt-cat-ctatacagccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctgaaagctgaaagcttttaatgtcacctagtgtacaggttggga--cac---tct---taaaggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcactgtgggaagttgaagatgcaataatttatcctttactctCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57328152 338 + 70235451 attagatttttctataaattacatatattatctcttctcatcactgatagt-tttaatagcatggagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctccactggaagctggaagctcaaagcttttaatgtcacctagtatacaagttgggg--cac---tct---taagggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtaggaagttgaagatgcaataatttatcctttactCTCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63019525 338 - 75711847 attagatttttctataaattacatatattatctcttctcatcactgatagt-tttaatagcatggagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctccactggaagctggaagctgaaagcttttaatgtcacctagtatacaagttgggg--cac---tct---taagggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtaggaagttgaagatgcaataatttatcctttactCTCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13572200 331 - 18804593 attagatttttctataaattacatatattatctcttctcatcactgatagt-tttaatagcatggagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctggaagctgaaagcttttaatgtcacctagtacacaagttgggg--cac---tct---taagggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtaggaagttgaagatgcaataatttatcctttactCTCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189021 331 + 18905526 attagatttttctataaattacatatattatctcttctcatcactgatagt-tttaatagcatggagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctggaagctgaaagcttttaatgtcacctagtatacaagttgggg--cac---tct---taagggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--ctgtgctttca-tctttcattgtaggaagttgaagatgcaataatttatcctttactCTCCTTAGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60018712 333 - 72318688 attagatttttctataaattacatatattatctcttctcatcactgatagt-tttaatagcatggagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctggaagctgaaagcttttaatgtcacctagtatacaagttgggg--cac---tct---taagggtgaaacatgcttactccaaaactcaaagaagtctatcaagcagtgtgtgctttca-tctttcattgtaggaagttgaagatgcaataatttatcctttactCTCCTTGGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 352762 331 - 1517660 attagatttttctataaattacatatattatctcttctcatcactgatagt-tttaatagcatggagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctggaagctgaaagcttttaatgtcacctagtatacaagttgggg--cac---tct---taagggtgaaacatgcttactccaaaactcaaagaagtctatcaagca--ctgtgctttca-tctttcattgtaggaagttgaagatgcaataatttatcctttactctCCTTAGTCAAAACAGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3452783 331 + 6513552 attagatttttctataaactacatatattatctcttctcatcactgatagt-tttaatagcatagagt-cat-ctacatggccccagcagctgtccagacctgccacagagtacatctgggtctgggctcca-------ctgaaagctgaaagcttttaatgtcacctagtatacaagttgggg--cac---tct---taagggtgaaacacgcttactccaaaactcaaagaagtctatcaagca--gtgtgctttca-tctttcattgtaggaagttgaagatgccataatttatcctttactctCCTTGGTCAAAACCGTCAGATTATCTATGTTTCACC--------------------------------------ACGTATTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105226765 330 + 117903854 attagatttttctataaactacatatgttatctcttctcggcactgataac-tttaatagcacagagt-cag-ctacatggccccagcagctgtccagacctgacacagagta--tctgggtctgggctcca-------ctgaaagctgaaagcttttaatgtcacctagtatacaggttggggcacac---cct---taagggtgaaacattcttact-caaaactcaaagaaatctatcaagca--gtgtgctttca-tcctttattgtggaaagttgaagatgcaataatttatcttttactctgTTTGGTCAAAACAGTCAGATTATGTATGTTTCACA--------------------------------------ATGTATTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19419869 333 - 31320352 attaaatttttctataaactacatatgttatctcttctcatcactaataac-tttaatagcacagagt-cag-ctatatggccccagcagctgtccaaacctgacacagagtacctctgggtctgggctcaa-------ctgaaagctgaaagcttttaatgtcacctagtatacaggttggggcacac---tct---taaggatgaaacatgtttactccaaaactcaaagaaatctatccagca--gtgtgctttca-tgctttattgtgggaagttgaagatgcaataatttaccttttacGTGCTTTGGTCAAAATAGTCAGATTATGTATGTTTCACC--------------------------------------ATGTTTTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1614968 333 + 2203405 attagatttttctataaactacatatgttatctcttctcatcactgataac-tttaatagcacagagt-cag-ctacatggccccagcagctgtccagaactgacacagagcacatctgggtctgggctcca-------ctgaaagctgaaagattttaatgtcacctagcatacaggttggggcacac---tct---taagggtgaaacatgcttactccaaaactcaaagaaatctatccagca--gcgtgctttca-ccctttattgtgggaagttgaagacacaataatttatcttttactctCTTTGGTCAAAACAGTCAGATTATGTATGTTTCACC--------------------------------------ATGTATTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3567083 331 - 14941987 attagatttttctataaactacatacgttatctcttctcatcattgataacttttaatagcacagagt-cag-ctatatggccccagcagctgtccagagctg--acagagtatatctgggtctgggctcca-------ctgaaagctgaaagcttttaatgtcacctagtatacaggttggggcacac---tct---taagggtgaaacatgcttactccaaaactc-aagaaatctatcaagca--gtgtgctttca-tcctttatggtgggaagctgaagacacaataatttatcttgtactctCTTTGGTCAAAACAGTCAGATTATGTATGTTTTACC--------------------------------------ATGTATTCA i aotNan1.NW_018502140v1 I 320 C 0 s canFam3.chr1 112281032 367 - 122678785 attgggtctt-------actatgtgtggcatctttccccatgattgatagt-gtcagtaacatggggtatataccatctggtccaagctacagtgtagccctgccgtggagtatatccgggtct-tgttccg-------ctgaaagccggcagcctttcacatcacccatcatgtaggtcagg---cacacatctaaataaatgtgaaacatgaagtctccagaactcaaagaagcctatcatata--gtatgcttccctttttttattgtggaaagttcaagacacagtgtcctgtc-tttgctcatcttggCTCAAATGATCAGGTCA-ATAAGTTTCACCATCAAATATTTTTTTTTTAAtttttttaaaatttatttatttattca i canFam3.chr1 C 0 I 156 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I e otoGar3.GL873546 11210846 511 - 20685099 I a score=2032163.000000 s hg38.chr18_GL383571v1_alt 39614 196 + 198278 TGTTATTAAGAGATATCTTGGATTGTTAATGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAGTAAAT-ATGTATTTAAACAAAAATATATAAAGTTAAACTAACCTATAGGAGTTTCTTTAT-AAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC s panTro5.chr18 64995761 196 + 78221452 TGTTATTAAGAGATATCTTGGATTCTTAATCCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAGTAAAT-ATGTATTTAAACAAAAATATATAAAGTTAAACTAACCTATAGGAGTTTCTTTAT-AAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64118166 196 + 77229886 TGTTATTAAGAGATATCTTGGATTCTTAATGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAGTAAAT-ATGTATTTAAACAAAAATATATAAAGTTAAACTAACCTATAGGAGTTTCTTTAT-AAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5337287 196 + 17472758 TGTTATTAAGAGATATCTTGGATTCTTAATGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAGTAAAT-ATGTATTTAAACAAAAATATATAAAGTTAAACTAACCTGTAGGAGTTTCTTTAT-AAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTGGAGTAACCATAACC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139376147 196 - 152096393 TGTTATTAAGAGATATCTTGGATTCTTAATGCTTTTATGGACTACTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAGTAAAT-ATGTATTTAAACAAAAATATATAAAGTTAAACTAACGTATAGAAGTTTCTTTAT-AAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57328490 196 + 70235451 TATTATTAAGAGATATCTTGGATTCTTAACGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTATTtaaacaaaaatatacaaagctaaactaacctaCAGAAGTTTCTTTAT-AAAATTACAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63019863 196 - 75711847 TATTATTAAGAGATATCTTGGATTCTTAACGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTATTtaaacaaaaatatacaaagctaaactaacctaCAGAAGTTTCTTTAT-AAAATTACAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13572531 196 - 18804593 TGTTATTAAGAGATATCTTGGATTCTTAATGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTATTtaaacaaaaatatacaaagctaaactaacctaCAGAAGTTTCTTTAT-AAAATTACAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189352 196 + 18905526 TGTTATTAAGAGATATCTTGGATTCTTAACGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTATTtaaacaaaaatatacaaagctaaactaacctaCAGAAGTTTCTTTAT-AAAATTACAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019045 196 - 72318688 TGTTATTAAGAGATATCTTGGATTCTTAACGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTGTTTAAACAAAAACATACAAAGCTAAACTAACCTACAGAAGTTTCTTTAT-AAAATTACAAGTACACATGTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353093 196 - 1517660 TGTTATTAAGAGATATCTTGGATTCTTAACGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTATTtaaacaaaaatatacaaagctaaactaacctaCAGAAGTTTCTTTAT-AAAATTACAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453114 196 + 6513552 TGTTATTAAGAGATATCTTGGATTCTTAATGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ATGTATTtaaacaaaaatatacaaagctaaactaacctaCAGAAGTTTCTTTAT-AAAATTACAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227095 180 + 117903854 TTTTATTAACAGAAATCTTGGATTCTTAATGCTATTATATACTTCTTGACTAATTGCCTTCTGAAATT-AACATGGtaaaatagtaaat-----------------atatataaaattaaaGCCACCTATAGGAGTTTCTTGAT-AAAATTATGAGTACCCATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19420202 196 - 31320352 TTTTATTAACAGAAATCTTGGATCCTTAATGCTATTATAGACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-GTGTATTTAAACAAAAATATAGAAAATTAAACCCACCTATAGGAGTTTCTTGAT-AAAATTATACATACACATTTCTACCTTTAGTCAAATTATTGAGTAATCATAACC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1615301 197 + 2203405 TTTTATTAACAGAAATCTTGGATCCTTAATGCTATTATAAACTTCTTGACTAATTGCCTTCTGAAATT-AACATAGTAAAATAATAAAT-ACGTATTTAAACAAAAATATAGAAAATTAAACCCACCTATAGGAGTTTCTTGATAAAAATTGTAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGCAACCATAACC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3567414 195 - 14941987 TTTTATTAACAGAAATCTTGGATTC-TAATGCTATTATAGACTTCTTGACTAATTGCCTTCTGAAATT-AACACAGTAAAATAATAAAT-ATGTATTTGAACAAAAATATAGAAAATTAAACCCACCTATAGGAGTTTCTTGAT-AAAATTATAAGTATACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACC i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112281555 182 - 122678785 TTTAATTAACAGAACTCTTGGAACCATAATGCATTTATAGATTTCTTGACATGTTCCTTTCTGaaattaaaaatagtaaaataataaaaaatatatttaaaCCAA-ATATATACATTTAAA--AAGCTCTAATAGTTTTT-----CAAATTCTAAATA-----TTCTGTCTTTAGTCAGACTGTTAAGT----TTAACC i canFam3.chr1 I 156 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I e otoGar3.GL873546 11210846 511 - 20685099 I a score=1885556.000000 s hg38.chr18_GL383571v1_alt 39810 191 + 198278 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAGTGTGTATTATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAATTTTGA---AGTTGATC-AG----CTTT--------------------------------GAGGGATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT s panTro5.chr18 64995957 182 + 78221452 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAA------TGTG---TATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAACTTTGA---AGTTGATC-AG----CTTT--------------------------------GAGGGATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64118362 182 + 77229886 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAA------TGTG---TATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAACTTTGA---AGTTGATC-AG----CTTT--------------------------------GAGGGATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5337483 188 + 17472758 ACGTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAACTTTGA---AGTTGATC-AG----CTTT--------------------------------AAGGGATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139376343 188 - 152096393 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAACTTTGA---AGCTGATC-AG----CTTT--------------------------------GAGGGATATT-ACATATTTGCATTTTGAAATTAAACAAT-------GAGAAGTATAATCTGCAATCAACAAGAGGCTGCATTACAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57328686 185 + 70235451 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---CATTGGTTCTTCTCATTGAC---CTAACAGGACAGCAAAGAGAACTTCGA---AGTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020059 185 - 75711847 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGAC---CTAACAGGACAGCAAAGAGAACTTCGA---AGTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13572727 185 - 18804593 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTAAC---CTAACAGGACAGCAAAGAGAACTTCGA---AGTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189548 185 + 18905526 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGAC---CTAACAGGACAGCAAAGAGAACTTCGA---AGTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019241 185 - 72318688 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGAC---CTAACAGAACAGCAAAGAAAACTTTGA---AGTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATACAATCTGCAATCAACAAGAGGCTGCATTACAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353289 185 - 1517660 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGAC---CTAACAGGACAGCAAAGAGAACTTCGA---AGTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453310 185 + 6513552 ACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTG---TATTGGTTCTTCTCATTGAC---CTAACAGGACAGCAAAGAGAACTTTGA---ATTTGATC-AG----CTTT--------------------------------GAGGCATATT-AAATATTTGCATTTTGAAATTAAACAAT-------GAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227275 189 + 117903854 ACTTTCACTTTCTTAAAGTCAGTGGATAACTAGTAAACTTAATGTG---TATTCGTTCTTCTCACTGACATGGTAACAGGAAAGCAAAGAGAATTTTGA---AGTTGATC-AG----CTTT--------------------------------GTGAGACACTAAAATACTTACATTTCAAAAGTAAACAAT-------GAGAAATATAATCTGCAGTCAACAAGAGGCTGTATTAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19420398 186 - 31320352 ACTTTCACTTTCTTGAAGTCAGTGGATAACTAATAAACTTAATGTG---TATTCA---TTCTCACTGACATGATAGCAGGAAAGCAAAGAGAATTTTGA---AGTTAATC-AG----CTTT--------------------------------GTGAGATATTAAAATATTTACATTTCAAAATTAAACAAT-------GAGAACTATAATCTGCAGTCAACAAGAGGCTGCATTACAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1615498 189 + 2203405 ACTTTCACTTTCTTGAAGTCAGTGGATAACTAATAAACTTAATGCG---TACTTGTTCTTCTCACTGACACGATAGCAGGAAAGCAAAGAGAATTTTGA---AGTTGATC-AG----CTTT--------------------------------GTGAGATATTAAAATATTTACATTTCAAAATTAAACAAT-------GAGAAATATAATCTGCAGTCAACAAGAGCCTGCATTAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3567609 186 - 14941987 ACTTTCACTTTCTTGAAGTCAGTGGATAA----TAAACTTAATGTG---CATTCGTTCTTCTCACTGACATGGTAACAGGAAAGCAAAGAGAATTTTGA---AGTTGATCAAA----CTTT--------------------------------GTGAGATATTAAAATATTTACATTTCAAAATTAAACAAT-------GAGAAATATAATCTGCAGTCAACAAGAGGCTGTATTAAAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11211357 176 - 20685099 actttcACTTTTTAAAATACAGTATAAACATTTCTGAGTGGGTATC---TTTTACATGTTCTCATTTACATGATAA------AATAAAGAAAAGTTTGA---AGTTGATA-AAAATTCTTTATCTAAGAAAC------------------CCAAAGGAATTTA-AAATATCTGTATTGGGAAATTAAACAAT-------GAGAAAAATAATCTGC------------------------ i otoGar3.GL873546 I 511 C 0 s canFam3.chr1 112281737 229 - 122678785 ACTTTAACTTTCTTGAGGTCAATAGGTAACTGATAAACTTAATGTG---TATTCATTCTT-TCATCTACATGATTAAAGAAAATCAGAGAGAATTTAGAGATGATTAAAA-AG----TTTTATGCAAGAAACTTAGTATAAACTGCAAAACCTAAGGGATATT-AAAACTTTGTATTGTGAAATTAGGCAATTAAAAACGAGATACATAATCTATCATTTATAAGGTTCTGCATTAAAC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1233937 5983 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I a score=1618689.000000 s hg38.chr18_GL383571v1_alt 40001 132 + 198278 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGAAAAAACTTGATTGCTTAAAA---TGAACTTGATTGATGAACAAGAT--GAAATATTTAAATAATCTGG s panTro5.chr18 64996139 132 + 78221452 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATAAAACTTGATTGCTTAAAA---TGAACTTGATTGATGAACAAGAT--GAAATATTTAGATAATCTGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64118544 132 + 77229886 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATAAAACTTGATTGCTTAAAA---TGAACTTGATTGATGAACAAGAT--GAAATATTTAGATAATCTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5337671 132 + 17472758 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATAAAACTTGATTGCTTAAAA---TGAACTTAATTGATGAACAAGAT--GAAATATTTAAATAATCTGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139376531 132 - 152096393 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTGTCTTCTAGGGATTAAGATAAAACTTGATTGCTTAAAA---TGAACTTGACTGATGAACAAGAT--GAAATATTTGGATAATCTGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57328871 132 + 70235451 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020244 132 - 75711847 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13572912 132 - 18804593 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189733 132 + 18905526 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019426 132 - 72318688 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353474 132 - 1517660 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453495 132 + 6513552 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAAGATACAACTTGATTGCTTAAAA---TGAACTTGATTGATGAATAAGAT--GAAATATTTGGATAATCTGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227464 130 + 117903854 TGCTGATAACACATGGTGG-AAAATAAAGTTAAAAAT--TGTTTCAAAT-TGTATCTTCTAGAGATTAAGATAAAACTTGACTGTTGAAAA---TGAACTTGATTGATGAATAAGAC--AAAACATATGGAAAATCTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19420584 132 - 31320352 TGCTGATGACAAATGGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCCAGGGATTAAGATAAAACTTGATTGTTGAAAA---TGAACTTGATTGATGAACAAGAC--AAAATATATGAGAAATCTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1615687 130 + 2203405 TGCTGATGATAAATGGTGG-AAAATAAAGTTGGAAAC--AGTTTCAAAT-TGTATGTTCCAGGGATTAAGATAAAATTTGGTTGTTGAAAA---TGAACTTGATTGATGAACAAGAC--AAAATATATGGAAAATCTGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3567795 131 - 14941987 TGCTGATGATAAATAGTGG-AAAATAAAGTTGGAAATACTGTTTCAAAT-TGTATCTTCTAGGGATTAGGATAAAACTTGATTGTTGAAAA---TGAATTTGATTGATGAACAAGAC---AAATATATGGAAAATTCGG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1239920 131 - 1406956 TGCTGATGATAAATGGTGC-AAAATAAAGTGGGAGATACCGTTTCACAT-AATATATTCTGTGGATTAAGATA-AACTTGATTGTTTAAAA---TGAACTCAATTGATGAATATGAC--AAAATATTTGGATAATCTGG i proCoq1.NW_012148742v1 I 5983 I 84 s otoGar3.GL873546 11211533 129 - 20685099 ------TGATAAATGATACAAAAATAAAGTGGTAGATACTGTTTTGAATCCATACATTCTGTGCATTAAGAGA-AAGTTGATTGCTTAACA---TGAACTAGATTAATGAAGGTGACATAAAATATTAGGATAATCTGG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112281966 127 - 122678785 TGATGATGATAAATGGTGC-AAAATAAACAGAGAGGTATTGCTTCACCT-TGTATCCTCTGGTGAGCATGA------TTGCTTGATGGAGATTCTGAAAGTGATTGCTAA--GACAC--AAAATATTTGGATAATGTGG i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 459629 3991 - 2150887 I a score=596069.000000 s hg38.chr18_GL383571v1_alt 40133 52 + 198278 TATAAATATAATC-ATGTGTGAAATTTATTGGTGGTTAATGTAAA-TACTAA-AA s panTro5.chr18 64996271 52 + 78221452 TATAAATATAATC-ATGTGTGAAATGTATTGGTGGTGAATGTAAA-TACTAA-AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64118676 52 + 77229886 TATAAATATAATC-ATGTGTGAAATTTATTGGTGGTGAATGTAAA-TACTAA-AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5337803 52 + 17472758 TATAAATATAATC-ATGTGCGAAATTTATTGGTGGTTAATGTAAA-TACTAA-AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139376663 52 - 152096393 TATAAATATAATC-ATGTGTGGAATTTATTGGTGGTTAATGTAAA-TACTAA-AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329003 52 + 70235451 TATAAATATAATC-ATGTGTGAAATTTATTGGTGGTTAATGTAAA-TACTAA-AA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020376 52 - 75711847 TATAAATATAATC-ATGTGTGAAATTTATTGGTGGTTAATGTAAA-TACTAA-AA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573044 52 - 18804593 TATAAATATAATC-ATGTGTGAAATTTATTGGTGGTTAATGTAAA-TACTAA-AA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189865 52 + 18905526 TATAAATATAATC-ATGTGTGAAATTTATTAGTGGTTAATGTAAA-TACTAA-AA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019558 52 - 72318688 TATAAATATAATC-ATGTGTGAAATTTATTGGTGGTTAATGTAAA-TACTAA-AA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353606 52 - 1517660 TATAAATATAATC-ATGTGTGAAATTTATTAGTGGTTAATGTAAA-TACTAA-AA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453627 52 + 6513552 TATAAATGTAATC-ATGTGTGAAATTTATTGGTAGTTAATGTAAA-TACTAA-AA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227594 52 + 117903854 TGTAAATATAATC-ATGTGTGAAATTCATTGGTGGTTAATGTAAA-TGCCAA-AA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19420716 52 - 31320352 TGTAAATATAGTC-ATGTGTGAAATTCATTGGTGGTTAATGTAAA-TACCAA-AA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1615817 52 + 2203405 TGTAAATATAATC-ATGTGTGAAATTCATTGGTGGTTAATGTAAA-TGCCAA-AA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3567926 51 - 14941987 TAT-AATATAATT-ATGTGTGAAATTCATTGGTGGTTAATGTAAA-TGCCAA-AA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11211662 53 - 20685099 AGAAAATTTAATC-ATATGTGAAATCCATTGATAGTTAATGTGAATTTCTAA-CA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112282093 50 - 122678785 ----AATACATTTAATATATTAAATTCATTGATGGTTAATGCAAA-TACTAATAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240051 84 - 1406956 I e dasNov3.JH575754 459629 3991 - 2150887 I a score=84589.000000 s hg38.chr18_GL383571v1_alt 40185 8 + 198278 TTTCTAGT s panTro5.chr18 64996323 8 + 78221452 TTTCTAGT i panTro5.chr18 C 0 I 3 s panPan2.chr18 64118728 8 + 77229886 TTTCTAGT i panPan2.chr18 C 0 I 3 s gorGor5.CYUI01014964v1 5337855 8 + 17472758 TTTCTAGT i gorGor5.CYUI01014964v1 C 0 I 3 s nomLeu3.chr4 139376715 8 - 152096393 TTTCTAGT i nomLeu3.chr4 C 0 I 6 s rheMac8.chr18 57329055 8 + 70235451 TTTCTAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020428 8 - 75711847 TTTCTAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573096 8 - 18804593 TTTCTAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189917 8 + 18905526 TTTCTAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019610 8 - 72318688 TTTCTAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353658 8 - 1517660 TTTCTAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453679 8 + 6513552 TTTCTAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227646 8 + 117903854 TCTTTAGC i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19420768 8 - 31320352 TCTTTAGC i saiBol1.JH378121 C 0 I 5 s cebCap1.NW_016107689v1 1615869 8 + 2203405 TCTTTAGC i cebCap1.NW_016107689v1 C 0 I 5 s aotNan1.NW_018502140v1 3567977 8 - 14941987 TCTTTAGC i aotNan1.NW_018502140v1 C 0 I 349 s otoGar3.GL873546 11211715 7 - 20685099 TTTTTAG- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112282143 8 - 122678785 TTTTTATT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 463620 8 - 2150887 TTTCTAAA i dasNov3.JH575754 I 3991 C 0 e proCoq1.NW_012148742v1 1240051 84 - 1406956 I a score=344314.000000 s hg38.chr18_GL383571v1_alt 40193 40 + 198278 AAAAAAAG---------------------------------------AAAAAGAATAGAGTCAAGACGTTTGCAAGTCC s panTro5.chr18 64996334 40 + 78221452 AAAAAAAG---------------------------------------AAAAAGAATAGAGTCAAGACGTTTGCAAGTCC i panTro5.chr18 I 3 C 0 s panPan2.chr18 64118739 40 + 77229886 AAAAAAAG---------------------------------------AAAAAGAATAGAGTCAAGACGTTTGCAAGTCC i panPan2.chr18 I 3 C 0 s gorGor5.CYUI01014964v1 5337866 40 + 17472758 AAAAAAAG---------------------------------------AAAAAGAATAGAGTCAAGATGTTTGCAAGTCC i gorGor5.CYUI01014964v1 I 3 C 0 s nomLeu3.chr4 139376729 40 - 152096393 aaaaaaag---------------------------------------aaaaataaTAGAGTCAAGACTTTTGCAAGTCC i nomLeu3.chr4 I 6 C 0 s rheMac8.chr18 57329063 37 + 70235451 ---AAAAA---------------------------------------AAAAAGAATAGAGTCAAGACTTTTGCAAGTCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020436 37 - 75711847 ---AAAAA---------------------------------------AAAAAGAATAGAGTCAAGACTTTTGCAAGTCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573104 37 - 18804593 ---AAAAA---------------------------------------AAAAAGAATAGAGTCAAGACTTTTGCAAGTCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189925 38 + 18905526 --AAAAAA---------------------------------------AAAAAGAATAGAGTCAAGACTTTTGCAAGTCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019618 38 - 72318688 --AAAAAA---------------------------------------AAAAAGAATAGAGTCAAGACTTTTGCGAGCCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353666 38 - 1517660 --AAAAAA---------------------------------------AAAAAGAATAGAGTCAAGACTTTTGCAAGTCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453687 38 + 6513552 --AAAAAA---------------------------------------AAAAAGAATAGATTCCAGACTTTTGCAAGTCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227659 79 + 117903854 aaaaaaaagaaagaaaaaagaaaagagaagaaaaaaaagaaagaaagaaaaaGGGTAGAGTCAAAACTTTTGCAAGTCT i calJac3.chr13 I 5 C 0 s saiBol1.JH378121 19420781 40 - 31320352 AAAAAAAA---------------------------------------AAAATGAATAGAGTCAAAACTTTTGCAAGGCT i saiBol1.JH378121 I 5 C 0 s cebCap1.NW_016107689v1 1615882 55 + 2203405 aaaaaaaa------------------------aggaaagaaaggaaacaaaagaatagaGCCAAAACTTTTGCAAGTCT i cebCap1.NW_016107689v1 I 5 C 0 s aotNan1.NW_018502140v1 3568334 35 - 14941987 aaaaaaaa---------------------------------------aaaa-----aGAGTCAAAACTTTTGCAAGTGT i aotNan1.NW_018502140v1 I 349 C 0 s otoGar3.GL873546 11211722 35 - 20685099 -----AAA---------------------------------------GAAATAAAAACAATCAAGACTTTGGTAAGTCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112282151 36 - 122678785 ----AAGA---------------------------------------AAAACACGAAAAAGCAAGACTTTAGTAAGTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 463628 43 - 2150887 -AATAAAA-----------------------------------CTTTACACTGAAAATGATCAAGATTCCAAGAAGTCC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1240051 84 - 1406956 I a score=704277.000000 s hg38.chr18_GL383571v1_alt 40233 52 + 198278 AGTCTACTGAGTTTATGC--CACAACTAAGCAGAAATGGAATTCTGAAATCAGA s panTro5.chr18 64996374 52 + 78221452 AGTCTACTGAGTTTATGC--CACAACTAAGCAGAAATGGAATTCTGAAATCAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64118779 52 + 77229886 AGTCTACTGAGTTTATGC--CACAACTAAGCAGAAATGGAATTCTGAAATCAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5337906 52 + 17472758 AGTCTACTGAGTTCATGC--CACAACTAAGCAGAAATGGAATTCTGAAATCAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139376769 52 - 152096393 AGTCTACTGAGTTTATGC--CACAACTAAGCAGAAATGGAATTCTGAAATCAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329100 52 + 70235451 AGTCTACTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTTAAATCAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020473 52 - 75711847 AGTCTACTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTTAAATCAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573141 52 - 18804593 AGTCTACTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTTAAATCAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13189963 52 + 18905526 AGTCTGCTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTTAAATCAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019656 52 - 72318688 AGTCTACTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTGAAATCAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353704 52 - 1517660 AGTCTGCTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTTAAATCAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453725 52 + 6513552 AGTCTACTGAGTTTATGC--CACAATTAAGCAGAAATGGAATTCTGAAATCAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227738 49 + 117903854 AGT---CTGAGTTTATGC--CTCAATTGAGCATAAATGGCATTCTGAAATCAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19420821 52 - 31320352 AGTCTACTGAGTTTACGC--CACAATTAAGCATAAATGGCATTCTGAAACCAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1615937 52 + 2203405 AGTCTACTGAGTTTATGC--CACAATTAAGCATAAATGGCATTCTGAAACCAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3568369 52 - 14941987 AGTCTACTGAGTTTATGC--CACAATCAAGCATAAATGGCATTCTGCAATCAGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1240135 54 - 1406956 AGTTTACTGAGTTTATGCCACACAATTAAGCAAAAATGGCTTCCTGAAATCAGA i proCoq1.NW_012148742v1 I 84 C 0 s otoGar3.GL873546 11211757 54 - 20685099 CATTTACTGAGTTTATGCCACACAATTAAACGAAAATGGCTTCCTGTAATCAGA i otoGar3.GL873546 C 0 I 140 s canFam3.chr1 112282187 37 - 122678785 AGTCTACTGGGCTTATGC--CATAATTAAGCAGAAATGG--------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 463671 51 - 2150887 AGTGTACTGAGCTCATGG--CACAATTAAGCAGAAATGAC-TCCTGAGGTCAGA i dasNov3.JH575754 C 0 C 0 a score=3109669.000000 s hg38.chr18_GL383571v1_alt 40285 218 + 198278 GTT----GTTATCTAACACTGGGAAAGATATGAGAATAATTTCATGTGACAGAATAATTTGTTCTATATTGCAG----TTAAAGAAAATGATAAAAGCCGTTTAATTCATTTGACAAA-GAGATTTTGAAAGGTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTGTAATTGTCCACTGTATTTGCATACCAACGAGAG--AAAACAGTAATAA s panTro5.chr18 64996426 218 + 78221452 GTT----GTTATCTAACACTGGGAAAGATATGAGAATAATTTCATGTGACAGAATAATTTGTTCTATATTGCAG----TTAACGAAAATGATAAAAGCCATTTAATTCATTTGACAAA-GAGATTTTGAAAGGTTTTCAAATTTATTCAACTGCTTCCTGAAGTCCCATAGCTACTTCCTGTAATTGTCCACTGTATTTGCATACCAACGCGAG--AAAACAGTAATAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64118831 218 + 77229886 GTT----GTTATCTAACACTGGGAAAGATATGAGAATAATTTCATGTGACAGAATAATTTGTTCTATATTGCAG----TTAACGAAAATGATAAAAGCCATTTAATTCATTTGACAAA-GAGATTTTGAAAGGTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTGTAATTGTCCACTGTATTTGCATACCAACGCGAG--AAAACAGTAATAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5337958 218 + 17472758 GTT----GTTATCTAACACTGGGAAAGATATGAGAATCATTTCATGTGACAGAATAATTTGTTCTATATTGCAG----TTAACGAAAATGATTAAAGCTGTTTAATTCATTTGACAAA-GAGATTTTGAAAGGTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTGTAATTGTCCACTGTATTTGCATACCAACATGAG--AAAACAGTAATAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139376821 218 - 152096393 GTT----GTTATCTAACACTGGGAAAGATATGACAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGTATTTGCATACCAACATGAG--AAAACAGTAATAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329152 218 + 70235451 GTT----GTTATCTAACACTGGGAAAGATACGAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAACAGTAATAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020525 218 - 75711847 GTT----GTTATCTAACACTGGGAAAGATACGAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAACAGTAATAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573193 218 - 18804593 GTT----GTTATCTAACACTGGGAAAGATACGAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCAGTGGATTTGCATACCAACATGAG--AAAACAGTAATAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190015 218 + 18905526 GTT----GTTATCTAACACTGGGAAAGATACGAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAACAGTAATAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019708 218 - 72318688 GTT----GTTATCTAACACTGGGAAAGATACAAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AACACAGTAATAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353756 218 - 1517660 GTT----GTTATCTAACACTGGGAAAGATACGAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCGTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAACAGTAATAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453777 218 + 6513552 GTT----GTTATCTAACACTGGGAAAGATACGAGAATCATTTCATGTGACAGAATAATTTGTTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCATTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCAACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAACAGTAGTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105227787 218 + 117903854 GTT----GTTACCTAGCACTGGGAAAGATATAAGAATTATTTCATGTGACAGAATAATTTATTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCTTTTGATTCATTTGACAAA-GAGATTTTGAAAGCTTTTCAAATTTATGCAACTACTTTCTGAAGTCCCATAGCTACTTCCTATAATGGTCCACTGGATTTGCATACCAATATAAG--AAAATAGTATTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19420873 218 - 31320352 GTT----GTTACCTAACACTGGGAAAGATATGAGAATTATTTCATGTGACAGAATAATTTATTCCATATTGCAG----TTAAGGAAAATGATTAAAGCTTTTTTATTCATTTGACAAA-GAGATTTTGAAAGTTTTTCAAATTTATTCAACTACTTACTGAAGTCCCATAGCTACTTCCTATAAGTGTCCACTGGATTTGCATACCAACATGAG--AAAATAGTAATAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1615989 222 + 2203405 GTTGTTAGTTACCTAACACTGGGAAAGACATGAGAATTATTTCAAGTTACAGAATAATTTATTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCTTTTGATTCATTTGGCAAA-GAGATTTTGAAAGTTTTTCAAATTTATTCAACTACTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAATAGCAATAA i cebCap1.NW_016107689v1 C 0 I 275 s aotNan1.NW_018502140v1 3568421 219 - 14941987 GTT----ATTACCTAACACTGCAAAAGATATGAGAATTATTTCATGTGGCAGAATAATTTATTCCATATTGCAG----TTAAGGAAAATGATTAAAGCCTTTTGATTCATTTGACAAATGAGATTTTGAAAGCTTTTCAAATTTATTCAACTACTTTCTGAAGTCCCATAGCTACTTCCTATAATTGTCCACTGGATTTGCATACCAACATGAG--AAAATAGTAATAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1240189 218 - 1406956 GTT----GTTTTCTGACCTTGGGAAAAATATGAGAGTCATTTTGTATGACAGAATAATTTGTTCCATATTGCAG----TTAAGAAAAACGATGAAAGCCCGTTCATTCAGTTGACAGA-AAGATTTTGAAGGCTTTTCAAATTTATTCAACTGCTTTCTAAAGTCCCATAGCTCCTTCCTATAATTGTCCACTAAATTTGCATACCAACATGAG--AAAATCGTAATGA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11211951 214 - 20685099 GTT----GTTTTCTGACCTTGGGAAACATA--AGAGTCATTCCCTATGACAGAATAATTTGTTCCATATTGCTG----TTAAGAGAAACGATTAATGCCCTTTCATTCAGTTGACAAA-AAGATTTTGAAAGCTTTTCAAATTTACACAACTGCTTT-TGAAGTCCCAGAGGTATTTCCTATAACTGTCCCCTGGATTTGCACACCAGCCTGAG---AAACAGTTATGC i otoGar3.GL873546 I 140 C 0 s canFam3.chr1 112282224 194 - 122678785 ----------------------------TATGAGAGTCATTTCAATTGACAGAATGATTTGTTCTGTATTGCAG----TTAAGAAAAATGATTAAAGCTCTTTGATTCAGTTGGCAAA-GAGATTTTGAAAGCTTTTCAAATTTATTCTACTGCTTTGTAAAACTCCATAGCTACTTCCTGTAATTGCCCACTAGATTTGCATACCAATATGAG--AAAACAGTGAAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 463722 213 - 2150887 GGG----GCTTTCCAACATAGGGCAAAATAAAAGAGCCATTTCATTTGACAGAGTGATTTATTCCATAATATAGGTTTTTAAAAAAAATCATTAAAGGTCTTTGATTCA---GATGAA-GAGATTGGGAAAGCTTTCTAAGAATATTCAACTGCTTT--------CCATAGCTACTTTCTATAATTGCCCCCTAGCCTTGCATACTAGCATGAAAAAAAACAGTAAGAA i dasNov3.JH575754 C 0 C 0 a score=1115587.000000 s hg38.chr18_GL383571v1_alt 40503 83 + 198278 CTTTCAAGTTAAATAATTCAAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC s panTro5.chr18 64996644 83 + 78221452 CTTTCAAGTTAAATAATCCAAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119049 83 + 77229886 CTTTCAAGTTAAATAATCCAAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338176 83 + 17472758 CTTTCAAGTTAAATAATTCAAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377039 83 - 152096393 CTTTCAAGTTGAATAATTCAAGCTTTCTTGGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329370 83 + 70235451 CTTTCAAGTTAAATCATTCCAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020743 83 - 75711847 CTTTCAAGTTAAATCATTCCAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573411 83 - 18804593 CTTTCAAGTTAAATCATTCCAGCTTTCTTAGTTCTAATTCTGCTAAATTTCGTATTGAACTTCAAAATTTTTATTGTTCACTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190233 83 + 18905526 CTTTCAAGTTAAATCATTCCAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60019926 83 - 72318688 CTTTCAAGTTAAATCATTCCAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 353974 83 - 1517660 CTTTCAAGTTAAATCATTCCAGCTTTCTTAATTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3453995 83 + 6513552 CTTTCAAGTTAAATCATTCCAGCGTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228005 83 + 117903854 CTTTTAAGTTAAATCATTTAAGCTTTGTTAGTTCTAATTCTGCTAAATTTCCTACTGAACTTCTAAATTTTTATTGTTCACTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421091 83 - 31320352 CTTTTAAGCTAAATAATTAAATCTTTGTTAGTTCTAATTCTGCTAAATTTCCTACTGAACATCTAAATTTTTATTGTTCTTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616486 83 + 2203405 cTTTTAAGCTAAATCATTTAAGCTTTGTTAGTTCTAATTCTGCCAAATTTCCTACTGAATTTCTAAATTTTTATTGTTCTTTC i cebCap1.NW_016107689v1 I 275 C 0 s aotNan1.NW_018502140v1 3568640 83 - 14941987 CTTTTAAGTTAAATCATTTAAGCTTTGTTAGTTCTAATTCTGCTAAATTTCCTACTGAACTTCTAAATTTTTATTGTTCACTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1240407 83 - 1406956 CTTTCAAGTTAAATAATTTGAACTTCATCAGTTCTAATCCCACTGAATTTCCTATTGAACTTTAAAATTGTTATTGATCACTC i proCoq1.NW_012148742v1 C 0 I 393 s otoGar3.GL873546 11212165 77 - 20685099 CTCTC-----AAATACATCAAACTTCAT-GGTTCTAATCCCACTGAACTCCCTACTGAATTTCAAAATTGTTATTGATCTCTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112282418 83 - 122678785 CTTTCAAGTTAAATCAACCCAACATCTTTAGTTCTAACCGTGATATATTTCCTACTGAACTTCAACATTGCTATTGATCACTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 463935 81 - 2150887 --TTAAACTTTAATCATCTGGGCTTCTTTAGTTCTAACCCTGCTGAATTTCCTACTTAAGTTCAAAATTGTTTTGCATCCCTC i dasNov3.JH575754 C 0 C 0 a score=241835.000000 s hg38.chr18_GL383571v1_alt 40586 25 + 198278 AGAATCAGTTAC----------AACGTCTTTGCTG s panTro5.chr18 64996727 25 + 78221452 AGAATCAGTTAC----------AACGTCTTTACTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119132 25 + 77229886 AGAATCAGTTAC----------AACGTCTTTGCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338259 25 + 17472758 AGAATCAGTTAC----------AATGtctttgctg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377122 25 - 152096393 AAAATCAGTTAC----------AATGTCTTTGCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329453 25 + 70235451 AAAATCAGTTAC----------AATGTCTTTGCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020826 25 - 75711847 AAAATCAGTTAC----------AATGTCTTTGCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573494 25 - 18804593 AAAATCAGTTAC----------AATGTCTTTGCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190316 25 + 18905526 AAAATCAGTTAC----------AATGTCTTTGCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020009 25 - 72318688 AAAATCAGTTAC----------AATGTCTTTGCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354057 25 - 1517660 AAAATCAGTTAC----------AATGTCTTTGCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454078 25 + 6513552 AAAATCAGTTAC----------AATGTCCTGGCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228088 25 + 117903854 AAAATTAGTTAC----------GATGTATTTGTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421174 25 - 31320352 AAAATCAGTTAC----------AATGTACTTGTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616569 24 + 2203405 AAAATCAGTTAC----------AATATA-TTGTGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3568723 25 - 14941987 AAAATCAGTTAC----------AATGTATTTGTGG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11212242 25 - 20685099 AGTATTAATAAC----------AACACTGTTACTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112282501 25 - 122678785 AATATCAATAAC----------CATGTTGTTGCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 464016 33 - 2150887 --AATACGTTCCTAAGAGATAAAGGGTTTTTGCTG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I a score=61175.000000 s hg38.chr18_GL383571v1_alt 40611 9 + 198278 CTTTTTCC---------------C s panTro5.chr18 64996752 9 + 78221452 CTtttttt---------------c i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119157 9 + 77229886 CTTTTTTT---------------C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338284 9 + 17472758 cttttttc---------------c i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377147 9 - 152096393 CTTTTTTC---------------C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329478 9 + 70235451 CTTTTCTC---------------C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63020851 9 - 75711847 CTTTTCTC---------------C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573519 9 - 18804593 CTTTTCTC---------------A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190341 9 + 18905526 CTTTTCTC---------------C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020034 9 - 72318688 CTTTTCTC---------------C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354082 9 - 1517660 CTTTTCTC---------------C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454103 9 + 6513552 CTTTTCTC---------------C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228113 24 + 117903854 Cttttttttcttttttctttattc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421199 8 - 31320352 CTTTTTTT---------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616593 9 + 2203405 CTTTTTTT---------------C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3568748 8 - 14941987 CTTTTTTC---------------- i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 464049 9 - 2150887 CCTTTCCC---------------C i dasNov3.JH575754 C 0 I 896 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C a score=1409805.000000 s hg38.chr18_GL383571v1_alt 40620 168 + 198278 Attttcttttttt---tct------tttttttttttt--------------taagaca-gg--tctcactc--ttg-ccggggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--ataccatgcccagctaatt s panTro5.chr18 64996761 162 + 78221452 attttcttt---------t------cttttttttttt--------------taagaca-gg--tctcactc--ttg-ccggggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--ataccatgcccagctaatt i panTro5.chr18 C 0 I 10 s panPan2.chr18 64119166 161 + 77229886 ATtttctt----------t------tctttttttttt--------------taagaca-gg--tctcactc--ttg-ccggggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--ataccatgcccagctaatt i panPan2.chr18 C 0 I 5 s gorGor5.CYUI01014964v1 5338293 166 + 17472758 attttctttttct-----t------tttttttttttt--------------taagaca-gg--tctcactc--ttg-ccggggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagcagctgggagtg--ataccatgcccagctaatt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377156 164 - 152096393 ATTTTCTTTCTTtttttct------tcttttcttttt--------------taagacaggg--tctcactccgttgcccggggctggagtgcagttgcatgaacatg---cactgcagccgtgacttcctgagcctcaagcaattctcccatcttagcatcccaagtaaccggga----------atgcccagctaatt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329487 169 + 70235451 ATTTTCttcttc------t------ttttttcttttt--------------taagacaggg--tgtcaccttgttacccagggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i rheMac8.chr18 C 0 I 5 s macFas5.chr18 63020860 169 - 75711847 ATTTTCttcttc------t------ttttttcttttt--------------taagacaggg--tgtcaccttgttacccagggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i macFas5.chr18 C 0 I 5 s macNem1.NW_012016688v1 13573528 169 - 18804593 ATTTCCTCCTCC------t------ttttttcttttt--------------taagacaggg--tgtcaccttgttacccagggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i macNem1.NW_012016688v1 C 0 I 5 s cerAty1.NW_012001075v1 13190350 169 + 18905526 ATTTTCttcttc------t------ttttttcttttt--------------taagacaggg--tgtcaccttgttacccaaggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i cerAty1.NW_012001075v1 C 0 I 5 s chlSab2.chr18 60020043 169 - 72318688 ATTTTCttcttc------t------ttttttcttttt--------------taagacaggg--tctcatcttgttacccagggctggagtgcagtggcatgaacgtggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i chlSab2.chr18 C 0 I 5 s manLeu1.NW_012106698v1 354091 169 - 1517660 ATTTTCttcttc------t------ttttttcttttt--------------taagacaggg--tgtcaccttgttacccaaggctggagtgcagtggcatgaacatggatcactgcagccttgacttcctgagcctcaagcgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i manLeu1.NW_012106698v1 C 0 I 5 s colAng1.NW_012115433v1 3454112 168 + 6513552 ATTCTCTTCCt-------t------ttttttcttttt--------------taagacaggg--tctcaccttgttacccagggctggagtgcagtggcatgaacatggatcactgcagccctgacttcctgagcctcaagtgattctcccatcttagcatcccaagtagctgggagtg--acaccatgaccagctaatt i colAng1.NW_012115433v1 C 0 I 5 s calJac3.chr13 105228137 177 + 117903854 tttttctttctttct---t----tctttttttttttt--------------tgaggcagggtctctcactctgtttcccagggctggagtgcaatggcatg-gcatggatcactgcagccttgacctcctgcacttcaaacaattctcccatcttagcatcccaattaacagggagtaatataccatgctcagctaatt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421207 175 - 31320352 Cttttctttctttct---t------tttttttttttt--------------tgagacagggtctctcactctgttgcccagggcttgagtgcagtggtatg-acatggatcactgcagtcttgacctcctgggcctcaagcaattctcccatcttagcatcccaattagcagggagtaatataccatgcccagctaatt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616602 191 + 2203405 TTTCTCGTTCTTTCT---t----tcttttttttttttttnnnnnnnnnncctgagacagggtctctcactctgttgcccagggctggagtgcagtggcatg-gcatggatcactgcagcattgacctcctgggcctcaagcaattctcccatcttagcatcccaattagcagggagtaatataccatgcccagctaatt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3568756 180 - 14941987 TTTTTCTATCttttt---tcttttttttttttttttt--------------tgagacagggtttctcactctattgcccagggctggagtgcagtggcatg-gcatggatcactgcagccttgacctcctgggcctcaagcaattctcccatcttagcatcccaattagcagggagtaatataccatgc-cagctaatt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C a score=44275.000000 s hg38.chr18_GL383571v1_alt 40788 8 + 198278 aaaacaaa s panTro5.chr18 64996933 8 + 78221452 aaaacaaa i panTro5.chr18 I 10 C 0 s panPan2.chr18 64119332 8 + 77229886 aaaacaaa i panPan2.chr18 I 5 C 0 s gorGor5.CYUI01014964v1 5338459 3 + 17472758 -----aaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377320 3 - 152096393 -----aaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329661 8 + 70235451 aaaacaaa i rheMac8.chr18 I 5 C 0 s macFas5.chr18 63021034 8 - 75711847 aaaacaaa i macFas5.chr18 I 5 C 0 s macNem1.NW_012016688v1 13573702 8 - 18804593 aaaacaaa i macNem1.NW_012016688v1 I 5 C 0 s cerAty1.NW_012001075v1 13190524 8 + 18905526 aaaacaaa i cerAty1.NW_012001075v1 I 5 C 0 s chlSab2.chr18 60020217 8 - 72318688 aaaacaaa i chlSab2.chr18 I 5 C 0 s manLeu1.NW_012106698v1 354265 8 - 1517660 aaaacaaa i manLeu1.NW_012106698v1 I 5 C 0 s colAng1.NW_012115433v1 3454285 8 + 6513552 aaaacaaa i colAng1.NW_012115433v1 I 5 C 0 s calJac3.chr13 105228314 4 + 117903854 aaaa---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421382 8 - 31320352 aaaagaaa i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3568936 8 - 14941987 aaaagaaa i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e cebCap1.NW_016107689v1 1616793 0 + 2203405 C a score=36384.000000 s hg38.chr18_GL383571v1_alt 40796 6 + 198278 acaaaa s panTro5.chr18 64996941 6 + 78221452 acaaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119340 6 + 77229886 acaaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338462 6 + 17472758 acaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377323 6 - 152096393 acaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329669 6 + 70235451 acaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021042 6 - 75711847 acaaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573710 6 - 18804593 acaaga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190532 6 + 18905526 acaaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020225 6 - 72318688 acaaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354273 6 - 1517660 acaaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454293 6 + 6513552 acaaaa i colAng1.NW_012115433v1 C 0 C 0 s aotNan1.NW_018502140v1 3568944 6 - 14941987 aaaaaa i aotNan1.NW_018502140v1 C 0 I 31 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228318 0 + 117903854 C e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e cebCap1.NW_016107689v1 1616793 0 + 2203405 C e saiBol1.JH378121 19421390 0 - 31320352 C a score=76064.000000 s hg38.chr18_GL383571v1_alt 40802 15 + 198278 caaaa--aaattttgta s panTro5.chr18 64996947 15 + 78221452 caaaa--AAATTTTGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119346 15 + 77229886 caaaa--aaattttgta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338468 15 + 17472758 caaaa--aaattttgta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377329 15 - 152096393 caaat--aaattttgta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329675 17 + 70235451 caaaaacaaaatttgta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021048 17 - 75711847 caaaaacaaaatttgta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573716 17 - 18804593 caaaaacaaaatttgta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190538 17 + 18905526 caaaaacaaaatttgta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020231 17 - 72318688 caaaaacaaaatttgta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354279 17 - 1517660 caaaaacaaaatttgta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454299 17 + 6513552 ccaaaacaaaaTTTGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228318 14 + 117903854 -gaaa--aaaatttgta i calJac3.chr13 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e aotNan1.NW_018502140v1 3568950 31 - 14941987 I e cebCap1.NW_016107689v1 1616793 0 + 2203405 C e saiBol1.JH378121 19421390 0 - 31320352 C a score=1505591.000000 s hg38.chr18_GL383571v1_alt 40817 287 + 198278 ggccgggcacggtggctcacgcctgtaattccagcactttgggaggccaaggcgggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaa-------ctctactaaaaatac-aaaaaattagccaggtgtggttgcgcggacctgaagtcccagctactcaggaggccgaggcaggagaatggcgtaagccctggaggcgaagcttgcagtgagccaagattgcgcccctgcactccagcctgggcgacagagcgagactcttgtctcaaa---------------aaaaaaaaa s panTro5.chr18 64996962 289 + 78221452 ggccgggtacggtggctcacgcctgtaattccagcactttgggaggccaaggcgggtggatctcgaggtcagcagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatac-aaaaaattagccaggtgtggttgcgcggacctgaagtcccagctactcaggaggccgaggcaggagaatggcgtaagccctggaggcgaagcttgcagtgagccaagattgcgcccctgcactccagcctgggcgacagagcgagactcttgtctc--------------------aaaaaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119361 291 + 77229886 ggccgggcacggtggctcacgcctgtaattccagcactttgggaggccaaggcgggtggatctcgaggtcagcagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatac-aaaaaattagccaggtgtggttgcgcggacctgaagtcccagctactcaggaggccgaggcaggagaatggcgtaagccctggaggcgaagcttgcagtgagccaagattgcgcccctgcactccagcctgggcgacagagcgagactcttgtcta------------------caaaaaaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338483 309 + 17472758 ggccgggcacggtggctcactcctgtaattccagcactttgggaggccaaggcgggtggatcacgaggtcaggagatcaagaccatcatggctaacacggtgaaaccccgtctccactaaaaatacaaaaaaattagccaggtgcggttgcgcggacctgaagtcccagctactcaggaggccgaggcaggagaatggcgtaagccctggaggcgaagcttgcagtgagccaagattgcgcccctgcactccagcctgggcgacagagcgagactc-tgtctcaaaaaaaataaataaaataaaataaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377344 282 - 152096393 ggccgggcgcggtggctcttgcctgtaattccagcactttgggaggccaaggcgggtggatcacgaggtcaggggatcaagaccattctggctaacacggtgaaaccccgtctctactaaaaatac-aaaaaattagccaggtgtggttgcacgtacctgtagtcgcagctactcgggaggctgaggcaggagaatggcgtaagcccgggaggcaaagcttgcagtgagccaagattgcgcccctgcactccagcctgggcaacagagtgagactc-cgtcta--------------------------a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329692 292 + 70235451 gtccgggcacggtggctcatgcctgtaatcccagcagtttgggaggccaagaggggtggatcacgaggtcaggagatcgagaccatcctggctaacccgatgaaacctcgtctgtactaaaaatat-aaaaaattagccaggagtggttgcacatacctgtagtcccagctactcaggaggctgagttaggagaatagcataaacccgggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-agcgacagagtgagactc-tgtcttgaa---------------aacaaaaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021065 292 - 75711847 gtccgggcacggtggctcacgcctgtaatcccagcagtttgggaggccaagaggggtggatcacgaggtcaggagatcgagaccatcctggctaacccgatgaaacctcgtctgtactaaaaatat-aaaaaattagccaggagtggttgcacatacctgtagtcccagctactcaggaggctgagttaggagaatagcataaacccgggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-agcgacagagtgagactc-tgtgtcgaa---------------aacaaaaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13573733 292 - 18804593 gtccgggcacggtggctcacgcctgtaatcccagcagtttgggaggccaagaggggtggatcacgaggtcaggagatcgagaccatcctggctaacccgatgaaacctcgtctgtactaaaaatat-aaaaaattagccaggagtggttgcacatacctgtagtcccagctactcaggaggctgagttaggagaatagcataaacccaggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-agcgacagagtgagactc-tgtctcgaa---------------aacaaaaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190555 292 + 18905526 gtccgggcatggtggctcacgcctgtaatcccagcagtttgggaggccaagaggggtggatcacgaggtcaggagatcgagaccatcctggctaacccggtgaaacttcgtctgtactaaaaatat-aaaaaattagccaggagtggttgcacatacctgtagtcccagctactcaggaggctgaggaaggagaatggcataaacccgggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-agtgacagagtgagactc-tgtctcgaa---------------aacaaaaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020248 292 - 72318688 gtccgggcacggtggctcacgcctgtaatcccagcagtttgggaggccaagaggggtggatcacgaggtcaggagatcgagaccatcctggctaacccgatgaaacctcgtctgtactaaaaatat-aaaaaattagccaggagtagttgcacatacctgtagtcccagctactcaggaggctgaggaaggagaatggcataaacccgggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-agcgacagagtgagactc-tgtctcgaa---------------aacaaaaca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354296 292 - 1517660 gtccgggcatggtggctcacgcctgtaatcccagcagtttgggaggccaagaggggtggatcacgaggtcaggagatcgagaccatcctggctaacccgatgaaactttgtctgtactaaaaatat-aaaaaattagccaggagtggttgcacatacctgtagtcccagctactcaggaggctgaggaaggagaatggcataaacccgggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-agtgacagagtgagactc-tgtctcgaa---------------aacaaaaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454316 292 + 6513552 ggctgggcacggtggttcatgcctgtaatcccagcagtttgggaggccaagaggagtggatcacgaggtcaggagatcgagaccatcctggctaacccgatgaaacctcgtctctactaaaaatat-acaaaattagccaggagtggttgcacatacctgtagtcccagctactcaggaggctgaggaaggagaatggcataaacctgggaggtggagcttgcagtgagccaagattgcaccactgcaccccagcct-ggcgacagagtgagactc-tgtctcgaa---------------aacaaaaca i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228332 0 + 117903854 C e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e aotNan1.NW_018502140v1 3568950 31 - 14941987 I e cebCap1.NW_016107689v1 1616793 0 + 2203405 C e saiBol1.JH378121 19421390 0 - 31320352 C a score=27717.000000 s hg38.chr18_GL383571v1_alt 41104 8 + 198278 aaaaaaaa s panTro5.chr18 64997251 8 + 78221452 atatatat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119652 8 + 77229886 aaaaaaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338792 8 + 17472758 aataaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377626 8 - 152096393 aaaaaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329984 8 + 70235451 aacaaaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021357 8 - 75711847 aacaaaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574025 8 - 18804593 aacaaaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190847 8 + 18905526 aacaaaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020540 8 - 72318688 aacaaaca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354588 8 - 1517660 aacaaaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454608 8 + 6513552 aacaaaca i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1616793 8 + 2203405 aaaagaaa i cebCap1.NW_016107689v1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228332 0 + 117903854 C e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e aotNan1.NW_018502140v1 3568950 31 - 14941987 I e saiBol1.JH378121 19421390 0 - 31320352 C a score=50637.000000 s hg38.chr18_GL383571v1_alt 41112 11 + 198278 aaaaaaatgca s panTro5.chr18 64997259 11 + 78221452 atatatgtgca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119660 11 + 77229886 aaatatgtgca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338800 11 + 17472758 aaaaaagtgta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377634 11 - 152096393 aaaaatttgta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57329992 11 + 70235451 aataaaatgta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021365 11 - 75711847 aataaaatgta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574033 11 - 18804593 aataaaatgta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190855 11 + 18905526 aataaaatgta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020548 11 - 72318688 aataaaatgta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354596 11 - 1517660 aataaaatgta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454616 11 + 6513552 aataaaatgta i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19421390 11 - 31320352 aaataattgta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616801 11 + 2203405 aaaaaattgta i cebCap1.NW_016107689v1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228332 0 + 117903854 C e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e aotNan1.NW_018502140v1 3568950 31 - 14941987 I a score=203213.000000 s hg38.chr18_GL383571v1_alt 41123 25 + 198278 gggttgggggtctcgccatttggtc s panTro5.chr18 64997270 25 + 78221452 gggatgggggtctcgccatttggtc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119671 25 + 77229886 gggatgggggtctcgccatttggtc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338811 25 + 17472758 gggatgggggtctcgccatttggtc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377645 25 - 152096393 ggaatgggggtcttgctatttggcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330003 25 + 70235451 gggatggggatctcaccatttggtc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021376 25 - 75711847 gggatggggatctcaccatttggtc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574044 25 - 18804593 gggatggggatctcaccatttggtc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190866 25 + 18905526 gggatggggatctcaccatttggtc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020559 25 - 72318688 ggaatggggatctcaccatttggtc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354607 25 - 1517660 gggatggggatctcaccatttggtc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454627 25 + 6513552 gggatggggatctcaccatttggtc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228332 25 + 117903854 gagatgggggtcttaccatttagtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421401 25 - 31320352 gagatgggggtctcaccaatttgtt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616812 25 + 2203405 gagatgggggtctcatcattttgct i cebCap1.NW_016107689v1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C e aotNan1.NW_018502140v1 3568950 31 - 14941987 I a score=911264.000000 s hg38.chr18_GL383571v1_alt 41148 97 + 198278 caggctggtctcaagctcctgggctcaagctatcttcccatcctggtctcccaaagttttgggataacaggtgtgagccactggaccttgccTTTGC s panTro5.chr18 64997295 97 + 78221452 caggctggtctcaggctcctgggctcaagctatcttcccatcctggtctcccaaagttttgggataacaggtgtgagccactggaccttgccTTTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119696 97 + 77229886 caggctggtctcaggctcctgggctcaagctatcttcccatcctggtctcccaaagttttgggataacaggtgtgagccactggaccttgccTTTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338836 97 + 17472758 caggctggtctcaagctcctgggctcaagctatcttcccatcctggtctcccaaagttttgggataacaggtgtgagccactggaccttgcctttgc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377670 96 - 152096393 caggctgggctcaagctcctgagctcaagcaatcttcccatctt-atctcccaaagttttgggataacaggtgtgagccactggaccttgccTTTGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330028 97 + 70235451 caggctgttctccagcttctgggcttaagcaatcttcccatcttggtctcccaaagttttgggatgacaggtgtgagccactagaccttgccTTTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021401 97 - 75711847 caggctgttctccagcttctgggcttaagcaatcttcccatcttggtctcccaaagttttgggatgacaggtgtgagccactagaccttgccTTTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574069 97 - 18804593 caggctgttctccagcttctgggcttaagcaatcttcccatcttggtctcccaaagttttgggatgacaggtgtgagccactagaccttgccTTTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190891 97 + 18905526 caggctgttctccagcttctgggctcaagcaatcttcccatcttggtctcccaaagttttgggatgacaggtgtgagccactagaccttgccTTTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020584 97 - 72318688 caggctgttctccagcttctgggctcaagcaatcttcccatcttgatctcccaaagttttgggatgacaggtgtgagccactagaccttgccTTTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354632 97 - 1517660 caggctgttctccagcttctgggctcaagcaatcttcccatcttggtctcccaaagttttgggatgacaggtgtgagccactagaccttgccTTTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454652 97 + 6513552 caggctgttctccagcttctgggctcaagcaatcttcccatcttggtctcccaaagttttgggatgataggtgtgagccacTAGACCTTGCCTTTGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228357 91 + 117903854 caggtggatctcaagctcctgggctcaagtaatcttcctgc------ccactcaagtgttgggataacaggtgtgagctacggcacctggcctttgc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421426 97 - 31320352 caggctggtctcaagctattgggctcaagcaatcttcccgccttggtctcccaaagtgttgggctaacaggtgtgagctactgcacctgaccTTCGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616837 97 + 2203405 caggctagtcttaagctcctgggctcaagcaatcttcccaccttggtctcccaaagtgttggggtaacaggtgtgagttactgcacctggccTTTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3568981 97 - 14941987 caggctggtctcaaattcctgggctcaagcaatcttcctgccttggtctcccaaagtgttgggataacaggtgtgagccactgcacctggccTTTGC i aotNan1.NW_018502140v1 I 31 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112282526 0 - 122678785 C e otoGar3.GL873546 11212267 0 - 20685099 C a score=434404.000000 s hg38.chr18_GL383571v1_alt 41245 43 + 198278 CTTTTTTCTTCAAATGAAAGTACTATTGTATTTTAGCAGA---CTA s panTro5.chr18 64997392 43 + 78221452 CTTTTTTCTTCAAATGAAAGTACTATTGTATTTTAGCAGA---CTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119793 43 + 77229886 CTTTTTTCTTCAAATGAAAGTACTATTGTATTTTAGCAGA---CTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338933 43 + 17472758 cttttttcttCAAATGAAAGTACTATTGTATTTTAGCAGA---CTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377766 43 - 152096393 CTTTTTTCTTAAAATAAAAGTACTACTGTGTTTTAGCAGA---CTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330125 43 + 70235451 CTTTTTTCTTAAAATAAAGGTACTATTTTATTTTAGCAGA---CTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021498 43 - 75711847 CTTTTTTCTTAAAATAAAGGTACTATTTTATTTTAGCAGA---CTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574166 43 - 18804593 CTTTTTTCTTAAAATAAAAGTACTATTTTATTTTAGCAGA---CTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13190988 43 + 18905526 CTTTTTTCTTAAAATAAAAGTACTATTGTATTTTAGCAGA---CTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020681 43 - 72318688 CTTTTTTCTTAAAATAAAAGTACTATTGTATTTTAGCAGA---CTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354729 43 - 1517660 CTTTTTTCTTAAAATAAAAGTACTATTGTATTTTAGCAGA---CTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454749 43 + 6513552 CTTTTTTGTTAAAATAAAAGTACTATTGTATTTTAGCAGA---CTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228448 40 + 117903854 ctttttGCTTAAAATTAAAATACTATTGTATTTTAATAGA------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19421523 40 - 31320352 CTTTTTGCTTAAAATAAAAATACTATTGTATCTTAATAGG------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1616934 43 + 2203405 CTTTTTGCTTAAAATAAAAATACTATTGTATTTTAATAGACTA--- i cebCap1.NW_016107689v1 C 0 I 470 s aotNan1.NW_018502140v1 3569078 40 - 14941987 CTTTTTGCTTAAAATAAAAATACTATTGTATTTTAATAGA------ i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11212267 43 - 20685099 CCTTTTTCTTAAAATAAAATTACTATTGCTTTTCAATAGG---CTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112282526 43 - 122678785 CCCATTTCTTAAGATAAAATTAGTCTTGTGTTTCAACAGA---CTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I a score=271841.000000 s hg38.chr18_GL383571v1_alt 41288 29 + 198278 CTAGTGtcttcttcctcctc------ctcttcttc s panTro5.chr18 64997435 29 + 78221452 CTAGTGCcttcttcctcctt------ctcttcttc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119836 29 + 77229886 CTAGTGCcttcttcctcctt------ctcttcttc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5338976 29 + 17472758 CTAGTGtcttcttcctcctc------ctcttcttc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377809 29 - 152096393 CTAGTGtcttcttcctcctc------ctcttcttc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330168 29 + 70235451 CTAGTGtcttcttcctcctc------cccttcttc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021541 29 - 75711847 CTAGTGtcttcttcctcctc------cccttcttc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574209 29 - 18804593 CTAGTGtcttcttcctcctc------cccttcttc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191031 29 + 18905526 CTAGTGtcttcttcctcctc------cccttcttc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020724 29 - 72318688 CTAGTGtcttcttcctcctc------cccttcttc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354772 29 - 1517660 CTAGTGtcttcttcctcctc------cccttcttc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454792 29 + 6513552 CTAGCACcttcttcctcctc------ctcttcttc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228488 29 + 117903854 CTAGTATTGTCTTCCACCTC------CTCTTTTTC i calJac3.chr13 C 0 I 445 s saiBol1.JH378121 19421563 29 - 31320352 CCAGTATCCTCTTCCGCCTC------CTCTTTTTC i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3569118 29 - 14941987 CTAGTATCTTCTTCCACCTC------CTCTTTTTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11212310 32 - 20685099 ---GCCCCTTTTTCCTTGTCTTGTGACTCATCTGC i otoGar3.GL873546 C 0 I 4 s canFam3.chr1 112282569 23 - 122678785 ------GTttcttcctcttt------ctcttcttc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e dasNov3.JH575754 464058 896 - 2150887 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I a score=9555.000000 s hg38.chr18_GL383571v1_alt 41317 1 + 198278 a s panTro5.chr18 64997464 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119865 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339005 1 + 17472758 a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377838 1 - 152096393 a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330197 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021570 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574238 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191060 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020753 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354801 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454821 1 + 6513552 a i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19421592 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3569147 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 I 460 s canFam3.chr1 112282592 1 - 122678785 a i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11212342 4 - 20685099 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I a score=-5391.000000 s hg38.chr18_GL383571v1_alt 41318 3 + 198278 acc- s panTro5.chr18 64997465 3 + 78221452 acc- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119866 2 + 77229886 ac-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339006 3 + 17472758 acc- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377839 3 - 152096393 acc- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330198 3 + 70235451 gtt- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021571 3 - 75711847 gtt- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574239 3 - 18804593 gtt- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191061 3 + 18905526 gtt- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020754 3 - 72318688 gtt- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354802 3 - 1517660 gtt- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454822 3 + 6513552 gct- i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19421593 2 - 31320352 -TC- i saiBol1.JH378121 C 0 I 437 s otoGar3.GL873546 11212346 2 - 20685099 -CC- i otoGar3.GL873546 I 4 I 3 s canFam3.chr1 112282593 3 - 122678785 -tcc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I a score=1798840.000000 s hg38.chr18_GL383571v1_alt 41321 325 + 198278 -----ttcttctctttcttctAAAGTGTCCCTAGATGTAC---ATAAGACT---AATGA-AAATCCTTATTCTGTGATACACTGTCATTACAAATCTATGCA------------AGATCtcctttcctttctt-------------ccttcttccctctctctctctgtctcattctctccttttctctttttctttcttttgttccttctttctt-----tTTTAAAATTAATGTGATGAACATCTGTAGCCCACGACCTCATCCAGCACTAGCATATTAACATAAGCTTATCTCTTGATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAACTTTTGAAGAG----CAAAGAGAAGAAA-GGTAAATA s panTro5.chr18 64997468 326 + 78221452 -----ttcttctctttcttctAAAGTATACCTAGATGTACATAATAAGACT---AATGA-AAATCCTTATTCTGTGATACACTGTCATTACAAATCTATACA------------CGATCtcctttcctttctt-------------ccttcttcc--ctctctctctgtctcattctctccttttctctttttctttcttttgttccttctttctt-----tTTTAAAATTAATGTGATGAACATCTGTAGCCCACGACCTCATCCAGCACTAGCATATTAACATAAGCTTATCTCTTCATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAACTTTTGAAGAG----CAAAGAGAAGAGA-GGTAAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64119868 322 + 77229886 -------cttctctttcttctAAAGTATCCCTAGATGTACATAATAAGACT---AATGA-AAATCCTTATTCTGTGATACACTGTCATTACAAATCTATACA------------CGAtctcctttcctttctt-------------ccttcttcc--ctctctctctgtctcattctctccttt--tctttttctttcttttgttccttctttctt-----tTTTAAAATTAATGTGATGAACATCTGTAGCCCACGACCTCATCCAGCACTAGCATATTAACATAAGCTTATCTCTTGATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAACTTTTGAAGAG----CAAAGAGAAGAGA-GGTAAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339009 322 + 17472758 -----ttct--tctttcttctAAAGTATCCCTAGGTGTAC---ATAAGACT---AATGA-AAATCTTTATTCTGTGATACACTGTCATTACAAATCTATGCA------------CGAtctcctttcctttctt-------------ccttcttcc--ctctctctctgtctcattctctccttt-ctctttttctttcttttgttccttctttctttc---tttTAAAATTAATGTGATGAACATCTGTAGCCCACTACCTCATCCAGCACTAGCATATTAACATAAGCTTATCTCTTGATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAACTTTTGAAGAG----CAAAGAGAAGAGA-GGTAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139377842 327 - 152096393 -----ttcttctctttcttctAAAGTATCCTGAGACGTACAGAATAAGACT---AATTA-AAATCCTTATTCTGTGATACACTGTCATTGCAAATCTATGCA------------TGACCTCctttcctttctt-------------ccttcttcc--ctctctctctgtctcattctgtctctt-ttctttttct---ttttgttccttctttctttctttttttAAAATTAATGTGATGAACATCTGTAGCCCACTACCTCATCCAGCACTAGCATATTAACATAAGCTTATCTCTTGATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAAATTTTGaagag----taaagagaagaga-ggtaaata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57330201 325 + 70235451 -----ttct--tatttcttctAAAATATCCCTAGATGTACAGAATAAGATT---AATGT-AAATCTTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACCTCCTttcctttctt-------------ccttcttccctctctctctctgtctcattctctttctc-ttttctcttttctttttgttctttctttctt-----TTTTAAAATTAATGTGATGAACATCTGTAGCCCACTACCTTATCCAGCACTAGCATATTCACATAAGCTTATCTC-TGATGTCTTCATTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGGAG----TAAAGAGAAGAGA-AGTAA--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021574 325 - 75711847 -----ttct--tatttcttctAAAATATCCCTAGATGTACAGAATAAGATT---AATGT-AAATCTTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACctcctttcctttctt-------------ccttcttccctctctctctctgtctcattctctttctc-ttttctcttttctttttgttctttctttctt-----ttttAAAATTAATGTGATGAACATCTGTAGCCCACTACCTTATCCAGCACTAGCATATTCACATAAGCTTATCTC-TGATGTCTTCATTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGGAG----TAAAGAGAAGAGA-AGTAA--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574242 325 - 18804593 -----ttct--tatttcttctAAAATATCCCTAGATGTACAGAATAATATT---AATGT-AAATCTTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACctcctttcctttctt-------------ccttcttccctctctctctctgtctcattctctttctc-ttttctcttttctttttgttctttctttctt-----ttttAAAATTAATGTGATGAACATCTGTAGCCCACTACCTTATCCAGCACTAGCATATTCACATAAGCTTATCTC-TGATGTCTTCATTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGGAG----TAAAGAGAAGAGA-AGTAA--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191064 318 + 18905526 -----ttct--tatttcttctAAAATATCCCTAGATGTACAGAATAAGATT---AATGT-AAATCTTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACCTCctttcctttctt-------------ccttcttccctctctctctctgtctcattctc--------tttctcttttctttttgttctttctttctt-----tttTAAAATTAATGTGATGAACATCTGTAGCCCACTACCTTATCCAGCACTAGCATATTCACATAAGCTTATCTC-TGATGTCTTCCTTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGGAG----TAAAGAGAAGAGA-GGTAA--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60020757 318 - 72318688 -----ttct--tatttcttctAAAATATCCCTAGATGTACAGAATAAGATT---AATGT-AAATCTTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACCtcctttcctttctt-------------ccttcttccctctctctctctgtctcattctc--------tttttcttttctttttgttctttctttctt-----ttttAAAATTAATGTGATGAACATCTGTAGCCCACTACCTTATCCAGCACTAGCATATTCACATAAGTTTATCTC-TGATGTCTTCCTTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGGAG----TAAAGAGAAGAGA-GGTAA--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 354805 325 - 1517660 -----ttct--tatttcttctAAAATATCCCTAGATGTACAGAATAAGATT---AATGT-AAATCTTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACctcctttcctttctt-------------ccctcttccctctctctctctgtctcattctctttctc-ttttctcttttctttttgttctttctttctt-----ttttAAAATTAATGTGATGAACATCTGTAGTCCACTACCTTATCCAGCACTAGCATATTCACATAAGCTTATCTC-TGATGTCTTCCTTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGgag----taaagagaagaga-ggtaa--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3454825 317 + 6513552 -----ttcc--tatttcttctAAAATATCCCTAGATGTACAGAATAAGATT---GATGT-AAATCCTTATTCTGTGATACACTGTCATTGCAAATCTATGCATGAC--------CGACCCCctttcctttctt-------------ccttcttcc--ctctctctctgtctctttctc-------ttttcttttttctttttgttctttctttctT-----TTTTAAAATTAATGTGATGAACATCTGTAGCCCACTACATCATCCAGCACTAGCCTATTCACATAAGCTTATCTC-TGATGTCTTCCCTTTTCCAAATCTCCTTACACCTTCAACTTTTGAGGAG----TAAAGAGAAGAGA-GGTAA--- i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11212351 267 - 20685099 -----CCAT--TCCTTCTTCTAAA-TGTCCT------TGCAGAGTAAGTCT---GATGACCAGTCCTTGTTTCCTGACACACTGTTGCTGTGAGTCCTCATA------------CGA-CTCCTTCCCTCTTTT-------------CTCCCTCCC--CCTTCTCT------------------------------------------TTCTTTCAT-----CCCTGTAAGTGATTTGGGGAACATCTGGAAACCACTGTCTTATCCAACACTAG-ACATGAACAGAAATGTGTCCC-TGACCTCATCTCTTTTCTCATTCTCCTTA---CTTCAATTTTTGAGGGC----TAGAGAGGAGAAG-AGTAA--- i otoGar3.GL873546 I 3 I 3 s canFam3.chr1 112282596 357 - 122678785 ttttctcct--tccttcttATAAATTA-CCTTGGA--TACATATTATTATTGACAATAA-CAATTCTTGTTTTATGACAAACTGTCATTATTAGTCCTCACATGGCccttccttccttcttctttccttccttacatacagacatccttccttccttccttccttccttctttccttTTCTTTC-TATCTCCTCCTCCTTTCACTCCTTCTCTCTTTTTGTTTCTTAAATTAATATG-TGAATATCTGAAG--CATGGGCTTGCCCAGTACTAGAACATT-ACATAAA--TATGTC-TGGTTTCCTCTTCTCTCTCATTAT-TTTACTCCTTTACTATTTGAGGATTAACTAAAGAGAAGAGGTGGCAAACA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240490 393 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=51576.000000 s hg38.chr18_GL383571v1_alt 41646 24 + 198278 TAAAACACTAAATTTGAAAAAATA s panTro5.chr18 64997794 24 + 78221452 TAAAACACTAAATTTGAAAAAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120190 24 + 77229886 TAAAACACTAAATTTGAAAAAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339331 24 + 17472758 TAAAACACTAGATTTGAAAAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139378169 24 - 152096393 tgaaacactaaaTTTGAAAAAATA i nomLeu3.chr4 C 0 C 0 s proCoq1.NW_012148742v1 1240883 24 - 1406956 TAAAACACTAAATTTGAAAAAATA i proCoq1.NW_012148742v1 I 393 I 198 s otoGar3.GL873546 11212621 23 - 20685099 CAAAACACTGAATTTGAAAAAAA- i otoGar3.GL873546 I 3 C 0 s canFam3.chr1 112282953 24 - 122678785 TAAAATACTAAATTTGAAAAAGTA i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3455142 0 + 6513552 C e manLeu1.NW_012106698v1 355130 0 - 1517660 C e chlSab2.chr18 60021075 0 - 72318688 C e cerAty1.NW_012001075v1 13191382 0 + 18905526 C e macNem1.NW_012016688v1 13574567 0 - 18804593 C e macFas5.chr18 63021899 0 - 75711847 C e rheMac8.chr18 57330526 0 + 70235451 C a score=821589.000000 s hg38.chr18_GL383571v1_alt 41670 147 + 198278 ATATCAGA--AGAGTAGGTTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAGTGAGATAGAATCAAAACAGATAGAAAGGGATGG--CGGGGAAATATAAGAAGGTA---GATAAAGAAGTG-----CTTCTTCATATTCATAT s panTro5.chr18 64997818 150 + 78221452 ATATCAGA--AGAGTACATTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGG--CAGGGAAATATAAGAAGGCAGATGATAAAGAAGTG-----CTTCTTCATATTCATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120214 150 + 77229886 ATATCAGA--AGAGTACATTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGG--CAGGGAAATATAAGAAGGCAGATGATAAAGAAGTG-----CTTCCTCATATTCATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339355 147 + 17472758 ATATCAGA--AGAGTACATTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGG--CGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATATTCATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139378193 145 - 152096393 ATATCAGA--AGAGTACATTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGAAAGGGATGGACAG----GGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCACATTTATAT i nomLeu3.chr4 C 0 I 1447 s rheMac8.chr18 57330526 136 + 70235451 ---------------ACATTTAGGAGGCGAAAGATGAGAGCAAGGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATGTTCATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63021899 136 - 75711847 ---------------ACATTTAGGAGGCGAAAGATGAGAGCAAGGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATGTTCATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574567 136 - 18804593 ---------------ACATTTAGGAGGCGAAAGATGAGAGCAAGGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATGTTCATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191382 136 + 18905526 ---------------ACATTTAAGAGGTGAAAGATGAGAGCAAGGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATGTTCATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60021075 136 - 72318688 ---------------ACATTTAGGAGGCGAAAGATGAGAGCAAAGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATGTTCATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 355130 136 - 1517660 ---------------acatttaagaggtgaaagaTGAGAGCAAGGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATCAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATAAAGAAGTG-----CTTCTTCATGTTCATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3455142 136 + 6513552 ---------------ACATTTAGGAGGTGAAAGATGAGAGCAAGGTGGGGTAGATGAAGAGAAGAAATGAGATAGAATTAAAACAGATAGAAAGGGATGGACAGGGGAAATATAAGAAGGCA---GATACAGAAGTG-----CTTCTTCACATTCATAT i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11212644 142 - 20685099 -ACACCCA--AGAGAACATTAAGGTGGTAAAAGATGAGACTGAGATGA---ACAGAATAGGAAGAAA--GGATAGCAACAAAAGAGAAAGGAAGGGATGG-TTAGAGAAGTATATGCAGGCG---GAGAAGCAGGGC-----CTCTTTCCTGCACACAC i otoGar3.GL873546 C 0 I 13 s canFam3.chr1 112282977 143 - 122678785 ---TCAGAAGAGAGAATATTAAGGGGGTGAAAGATGAGGGTGAGCTGG-ACAAATGAAGAG-------GAGGTCCAGTCAAAACAA--AGAACGGAATGGACAGAGGAGACATGAGAAGGCA---GAGAAGGGTGCATCTCTTTTCTTCACACCCATTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240907 198 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=191067.000000 s hg38.chr18_GL383571v1_alt 41817 42 + 198278 TTCTCTAGCAGCA-------ATAATTTATTAGA----ATGAAGCTAAGAAGG-A s panTro5.chr18 64997968 42 + 78221452 TTCTCTAGCAGCA-------ATAATTTATTAGA----ATGAAGCTAAGAAGG-A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120364 42 + 77229886 TTCTCTAGCAGCA-------ATAATTTATTAGA----ATGAAGCTAAGAAGG-A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339502 42 + 17472758 TTCTCTAGCAGCA-------ATAATTTATTAGA----ATGAAGCTAAGAAGG-A i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57330662 43 + 70235451 TTCTCTTGCAGCA-------ATAATTTATTAGA----ATGAGGCCGAGAAGGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022035 43 - 75711847 TTCTCTTGCAGCA-------ATAATTTATTAGA----ATGAGGCCGAGAAGGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574703 43 - 18804593 TTCTCTTGCAGCA-------ATAATTTATTAGA----ATGAGGCCGAGAAGGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191518 43 + 18905526 TTCTCTTGCAGCA-------ATAATTTATTAGA----ATGAGGCCGAGAAGGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60021211 43 - 72318688 TTCTCTTGCAGTA-------ATAATTTATTAGA----ATGAGGCCGAGAAGGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 355266 43 - 1517660 TTCTCTTGCAGCA-------ATAATTTATTAGA----ATGAGGCCGAGAAGGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3455278 43 + 6513552 TTCTCTTGCAGCA-------ATAATGTATTAGA----ATGAGGCCGAGAAGGAA i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11212799 53 - 20685099 TTCCCTCTCAGCAGGAACGCACCATGTATCAGAGAGTGCGAGGCTCAGAGGCA- i otoGar3.GL873546 I 13 I 1 s canFam3.chr1 112283120 40 - 122678785 --CTCTCTGGGCA-------AGTACTGGTCAGAGA--GTGAGCCTGAGAAG--- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1240907 198 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e nomLeu3.chr4 139378338 1447 - 152096393 I a score=1590896.000000 s hg38.chr18_GL383571v1_alt 41859 242 + 198278 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCCAGCTGAAAAAGTACTGCTCTTATCACTTCCAAATTTTTAGACCTCATGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATGTGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATTTACTAGGTTAAAC-AGA-AAC-----TGATGATGCCTTTTA s panTro5.chr18 64998010 242 + 78221452 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCCAGCTGAAAAAGTACTGCTCTTATCACTTCCAAATTTTCAGACCTCATGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATGTGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATTTACTAGGTTTAAC-AGA-AAC-----TGATGATGTCTTTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120406 242 + 77229886 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCCAGCTGAAAAAGTACTGCTCTTATCACTTCCAAATTTTCAGACCTCATGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATGTGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATTTACTAGGTTTAAC-AGA-AAC-----TGATGATGCCTTTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339544 242 + 17472758 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTATAAGATCTCTTCCAGCTGAAAAAGTACTGCTCTTATCACTTCCAAATTTTTAGACCTCATGGGAGGGATTACTTTGAC-TGTGCGATTAGCTAATGTGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATTTACTAGGTTTAAC-AGA-AAC-----TGATGATGCCTTTTA i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57330705 242 + 70235451 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCTAGCTGAAAAAATACTACTCTTACCACTTCCAAGTTTTTACACCTCATGGGAGGGATTATTTTGAC-TGTGTGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAATTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATATACTAGGTGTAAC-AGA-AAC-----TGATGATGTCTTTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022078 242 - 75711847 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCTAGCTGAAAAAATACTACTCTTACCACTTCCAAGTTTTTACACCTCATGGGAGGGATTATTTTGAC-TGTGTGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAATTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATATACTAGGTGTAAC-AGA-AAC-----TGATGATGTCTTTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574746 242 - 18804593 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCTAGCTGAAAAAATACTACTCTTACCACTTCCAAGTTTTTACACCTCATGGGAGGGATTATTTTGAC-TGTGTGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAATTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATATACTAGGTGTAAC-AGA-AAC-----TGATGATGTCTTTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191561 242 + 18905526 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCTAGCTGAAAAAATACTACTCTTACCACTTCCAAGTTTTTACACCTCATGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAATTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATATACTAGGTGTAAC-AGA-AAC-----TGATGATGTCTTTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60021254 242 - 72318688 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCTAGCTGAAAAAATACTACTCTTACCACTTCCAAGTTTTTACACCTCATGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATATACTAGGCTTAAC-AGA-AAC-----TGATGATGTCTTTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 355309 242 - 1517660 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCTAGCTGAAAAAATACTACTCTTACCACTTCCAAGTTTTTACACCTCATGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAATTTAAAGCAAACTTTCCCTGAA----GGCCAGTTTGATATATACTAGGTGTAAC-AGA-AAC-----TGATGATGTCTTTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3455321 241 + 6513552 TGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGAGTGGTCATTTGTAAGATCTCTTCTAGCTG-AAAAATACTACTCTTATCACTTCCAAATTTTTACACCTCTTGGGAGGGATTATTTTGAC-TGTGCGATTAGCTAATATGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAA----AGCCAGTTTGATATATACTAGGTTTAAC-AGA-AAC-----TGATGATGTCTTTTA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1241105 242 - 1406956 TGATATCTGATGAGCCACTTAACCCTCTGGGCCTGGGGACTGGTCATTTTTAAGATCTCTTCCAGCTGAGATAATATCGCTCTTATCTTTTCTAAATGGTTGCATCTCACAGGAGGGATTATTTTGCC-TGTGTGACTAGCAAATTTGAAAAT-ACTAATGAAAGGGAAGAGTTTAAAGCAAACTTTTCCTGAG----TGTGAGTTTGATATTTACTAGGTTCCTC-ACAGAAC-----TGATGAAGTCTCTTA i proCoq1.NW_012148742v1 I 198 C 0 s otoGar3.GL873546 11212853 241 - 20685099 TGATATCTGATGAGCTGCTTAGCCCTCCGGGCCTGGGGATTGGTCATTTTTAAGATAGCTTCCAGCTGAGATAATATCAATCTTATCTTTTCTAAATGGTTGCATCTCACACT-GGGGTGATTTTGCCTTGTGTGACTAGCTAATATGAAAAT-ATTAACAAAAGGGAAGCGTTTAAAGCAAACTTTTCTTGGT----TATGA-TTTGATATTTGCTACATTCACT-GTAGAAC-----TGATGAAGTCtttta i otoGar3.GL873546 I 1 I 588 s canFam3.chr1 112283160 242 - 122678785 TGAGAGCCAACAAGTGATTTAATTTTCTGGTCT--GGGATGGCTCCTTTTAAAGATCTCTTCCAGCTGAGATAATATTACTC--ATTACTTTTAAATTTCTACACCTTGTGGGAGGGATTATTTGGTCTTATGTAACTAGCTAATATGAAAAT-ATTAGTGAAAGAGAGGAGTTT-----AAACCTTCCCTGAATGTCAGTCAGTCTGGCATTTGCTTGGCTCACCTAGA-AATGATGATGATGATGTCTTTA- i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e nomLeu3.chr4 139378338 1447 - 152096393 I a score=1027680.000000 s hg38.chr18_GL383571v1_alt 42101 185 + 198278 AGGGAATTCTTAACTTGAACTTTCTTTGGGACAAAATTTACTCA-TGAAGTAACATTTTGTAGTTCTCAGCTAGGGTGAAAGATAATTTAAACTTAAAATAAATT--TATCTGTATTCATCAATATTGAATGAAGT---AGAGAGAAAAGTATGCCTCTTTTCCTCAATTATTCCTTATCGACAATTAATA s panTro5.chr18 64998252 180 + 78221452 AGGGAATTCTTAACTTGAACTTTCTTTGGGACAAAATTTACTCA-TGAAGTAACATTTTATAGTTCTCAGCTAGGGTGAGAGATAATTTAAACGTAAAATAAATT--TATCTGTATTCATCAATATTGAATG--------GAGAGAAAAGTATGCCTCTTTTCCTCAATTATTCCTTATCGACAATTAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120648 180 + 77229886 AGGGAATTCTTAACTTGAACTTTCTTTGGGACAAAATTTACTCA-TGAAGTAACATTTTATAGTTCTCAGCTAGGGTGAGAGATAATTTAAACTTAAAATAAATT--TATCTGTATTCATCAATATTGAATG--------GAGAGAAAAGTATGCCTCTTTTCCTCAATTATTCCTTATCGACAATTAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339786 184 + 17472758 AGGGAATTCTTAACTTGAACTTTCTTTGGGACAAAATTTACTCA-TGAAGTAACATTTTGTAGTTCTCAGCTAGGGTGAGAGATAATTTAAACTTAAAATAAATT--TATCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAAAGTATGCCTC-TTTACTCAATTATTCCTTATCGACAATTAATA i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57330947 185 + 70235451 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TAAAGTAACGTCCTGTAGTACTCAGCTAGGGTTAGAGATCATTTAAACTTAAAATAAATG--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTGCTTATCAGCAATTACTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022320 185 - 75711847 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TAAAGTAACGTCCTGTAGTACTCAGCTAGGGTTAGAGATCATTTAAACTTAAAATAAATG--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTGCTTATCAGCAATTACTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13574988 185 - 18804593 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TAAAGTAACGTCCTGTAGTACTCAGCTAGGGTTAGAGATCATTTAAACTTAAAATAAATG--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTGCTTATCAGCAATTACTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13191803 185 + 18905526 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TAAAGTAACGTCCTGTAGTACTCAGCTAGGGTTAGAGATCATTTAAACTTAAAATAAATG--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTGCTTATCAGCAATTACTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60021496 185 - 72318688 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TGAAGTAACGTCCTGTAGTACTCCGCTAGGGTTAGAGATCATTTAAACTTAAAATAAATG--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTGCTTATCAGCAACTACTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 355551 185 - 1517660 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TAAAGTAACGTCCTGTAGTACTCAGCTAGGGTTAGAGATCATTTAAACTTAAAATAAATG--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTGCTTATCAGCAATTACTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3455562 185 + 6513552 AGGGTATTCTTAACTTGAACTTTCTTTGGGACAAAATCTACTCA-TGAAGTAACATCTTGTAGTACTCAGCTAGCGTTAGAGATCATTTAAACTTAAAATAAATT--TCTCTGTATTCATCAATATTGAATGAAGT---GGAGAGAAATGTATGCATATTTTCCTCAATTATTCCTTATCAGCAATTACTA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1241347 185 - 1406956 AGGCAGCTCTTAACTTGAACTGTCATTGGGACAAATTTCACTCATTGAGGTAACGCCTTGTAGTACTCAGCTAGGCTTAGAGATAATTTAAATTTAACATAAAAT--TCTCTTTATTTATCAATATTGAATGAAAG---GGAGAAAAATGTATGCCT-TTTTTCTCAATTATTCCTTATTAACAATCACTA i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112283402 186 - 122678785 AGGCTTTTCCTAACTTGAATTTTCTTTAGAATAGAATTTACTCT-CAAAGTAATGGCCTGTAGTACTCAGCCAAGTTTAGAGA-GATTTAAATTTAAAACCAATGTTTTTCTTTATTCATGAATATTGAATGAAACCAGGAGAAAAAATGTGTACCTCATTTTCT---GCATTTCTCATTGATGATTATTG i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e nomLeu3.chr4 139378338 1447 - 152096393 I a score=52663.000000 s hg38.chr18_GL383571v1_alt 42286 8 + 198278 ATGCATGT s panTro5.chr18 64998432 8 + 78221452 ATGCATGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120828 8 + 77229886 ATGCATGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339970 8 + 17472758 ATGCATGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139379785 7 - 152096393 ATGCATG- i nomLeu3.chr4 I 1447 C 0 s rheMac8.chr18 57331132 8 + 70235451 ATGTATGT i rheMac8.chr18 C 0 I 103 s macFas5.chr18 63022505 8 - 75711847 ATGTATGT i macFas5.chr18 C 0 I 51 s macNem1.NW_012016688v1 13575173 8 - 18804593 ATGTATGT i macNem1.NW_012016688v1 C 0 I 103 s cerAty1.NW_012001075v1 13191988 8 + 18905526 ATGTATGT i cerAty1.NW_012001075v1 C 0 I 103 s chlSab2.chr18 60021681 8 - 72318688 ATGTATGT i chlSab2.chr18 C 0 I 106 s manLeu1.NW_012106698v1 355736 8 - 1517660 ATGTATGT i manLeu1.NW_012106698v1 C 0 I 103 s colAng1.NW_012115433v1 3455747 8 + 6513552 ATGTATGT i colAng1.NW_012115433v1 C 0 I 107 s proCoq1.NW_012148742v1 1241532 8 - 1406956 ATGTATGC i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112283588 8 - 122678785 GTGTATGT i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=8736.000000 s hg38.chr18_GL383571v1_alt 42294 4 + 198278 TGAA s panTro5.chr18 64998440 4 + 78221452 TGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120836 4 + 77229886 TGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339978 4 + 17472758 TGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139379792 4 - 152096393 TGAA i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63022564 4 - 75711847 tgag i macFas5.chr18 I 51 I 48 s proCoq1.NW_012148742v1 1241540 4 - 1406956 TGAA i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112283596 4 - 122678785 TGGA i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3455755 107 + 6513552 I e manLeu1.NW_012106698v1 355744 103 - 1517660 I e chlSab2.chr18 60021689 106 - 72318688 I e cerAty1.NW_012001075v1 13191996 103 + 18905526 I e macNem1.NW_012016688v1 13575181 103 - 18804593 I e rheMac8.chr18 57331140 103 + 70235451 I a score=625072.000000 s hg38.chr18_GL383571v1_alt 42298 89 + 198278 AATCTATTCCTTGG-TGCTGTCATGGA-----GTTG-AT-TGGCATTCTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT s panTro5.chr18 64998444 89 + 78221452 AATCTATTCCTTGG-TGCTGTCATGGA-----GTTG-AT-TGGCATTCTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120840 89 + 77229886 AATCTATTCCTTGG-TGCTGTCATGGA-----GTTG-AT-TGGCATTCTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5339982 89 + 17472758 AATCTATTCCTTGG-TGCTGTCATGGA-----GTTG-AC-TGGCATTCTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139379796 89 - 152096393 AATCTATTCCTTGG-TGCTGTCATGGA-----GTTG-AC-TGGCATTCTTTACTTAAGCTTGGGGCAAATGTTGTACTCTTATTTTAGAACATTCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331243 89 + 70235451 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i rheMac8.chr18 I 103 C 0 s macFas5.chr18 63022616 89 - 75711847 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i macFas5.chr18 I 48 C 0 s macNem1.NW_012016688v1 13575284 89 - 18804593 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i macNem1.NW_012016688v1 I 103 C 0 s cerAty1.NW_012001075v1 13192099 89 + 18905526 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i cerAty1.NW_012001075v1 I 103 C 0 s chlSab2.chr18 60021795 89 - 72318688 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i chlSab2.chr18 I 106 C 0 s manLeu1.NW_012106698v1 355847 89 - 1517660 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i manLeu1.NW_012106698v1 I 103 C 0 s colAng1.NW_012115433v1 3455862 89 + 6513552 AATCTATTCATTGG-TGCTGTCACTGA-----GTTG-AT-TGGCATTTTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTT i colAng1.NW_012115433v1 I 107 C 0 s proCoq1.NW_012148742v1 1241544 90 - 1406956 AACCTATTAATTGG-TGCTGTCACTGA-----ATGGCAT-TGGCATTGCTTATTTAATCTCGAGGCAAATTCTATACATTTATTTTAGAACACTCTT i proCoq1.NW_012148742v1 C 0 I 100 s canFam3.chr1 112283600 95 - 122678785 -AACAATTCATTGGCCTCTGTCTCTGAATGACATTG-GTATGGCATTCATTATTTAAACTTGAAGCAAATCCCATACCTTTGCTTGTAAACACTCTG i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=549576.000000 s hg38.chr18_GL383571v1_alt 42387 95 + 198278 -----GGCTTGCTCTTAGTCTTGTAATAAAC-AAAAGAacgtacttatttggtccattgtgtatttccc--tcccctaaaatgaagacagaaattcttatctg s panTro5.chr18 64998533 95 + 78221452 -----GGCTTGCTCTTAGTCTCGTAATAAAC-AAAGGAacgtacttatttggtccattgagtatttccc--tcccctaaaattaagacagaaattcttatctg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64120929 95 + 77229886 -----GGCTTGCTCTTAGTCTCGTAATAAAC-AAAGGAacgtacttatttggtccattgagtatttccc--tcccctaaaattaagacagaaattcttatctg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340071 94 + 17472758 -----GGCTTGCTCTTAGTCTTGT-ATAAAC-AAAAGAacgtacttatttggtccattgtgtatttccc--tcccctaaaattaagacagaaattcttatctg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139379885 96 - 152096393 -----GGCTTGCTCTTAGTCTTGTAATAAACAAAAAGAacatacttatttggtccattgtgtatttccc--tcccctaaaattaagacagaaattctcatctg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331332 95 + 70235451 -----GGCTTGCTCTTAGTCTTGtaatatac-aaaataatgtacttatttggtccattgtgtatttccc--tcctctaaaattgagacataaattcttatctg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022705 95 - 75711847 -----GGCTTGCTCTTAGTCTTGtaatatac-aaaataatgtacttatttggtccattgtgtatttccc--tcctctaaaattgagacataaattcttatctg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13575373 95 - 18804593 -----GGCTTGCTCTTAGTCTTGtaatatac-aaaataatgtacttatttggtccattgtgtatttccc--tcctctaaaattgagacataaattcttatctg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192188 95 + 18905526 -----GGCTTGCTGTTAGTCTTGtaatatac-aaaataatgtacttatttggtccattgtgtatttccc--tcctctaaaattgagacataaattcttacctg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60021884 95 - 72318688 -----GGCTTGCTCTTAGTCTTGtaatatac-aaaataatgtacttatttggtccattgtgtatttctc--tcctctaaaattgagacataaattcttatctg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 355936 95 - 1517660 -----GGCTTGCTGTTAGTCTTGtaatatac-aaaataatgtacttatttggtccattgtgtatttcct--tcctctaaaattgagacataaattcttacctg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3455951 95 + 6513552 -----GGCTTGCTCTTAGTCTTGtaatatac-aaaataacgtacttatttggtccattgtgtatttccc--tcctctaaaattgagacataaattcttatctg i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112283695 99 - 122678785 ACCTTGGttt--tcatcatctattaacacac-gacataatttacttacatggtctattgctaatttcccaatcttctagagtaaaggaagaaatt-ttgtctg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1241634 100 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=908901.000000 s hg38.chr18_GL383571v1_alt 42482 131 + 198278 attgctaatataccccaaacacttttcattttgtgtcacccatatcaggtgctgcccacatatttgtaaaatgagtgaatGAATTGCATTGAGCTATCACATATATTTCCACTTTAACAAAATCTAATATT s panTro5.chr18 64998628 131 + 78221452 attgctaatataccccaaacacttttcattttgtgtcacccatatcaggtgctgcccacatatttgtaaaatgagtgaatGAATTGCATTGAGCTATCACATATATTTCCACTTTAACAAAATCTAATATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64121024 131 + 77229886 attgctaatataccccaaacacttttcattttgtgtcacccatatcaggtgctgcccacatatttgtaaaatgagtgaatGAATTGCATTGAGCTATCACATATATTTCCACTTTAACAAAATCTAATATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340165 131 + 17472758 attgccaatataccccaaacacttttcattttgtgtcacccatatcaggtgctgcccacatatttgtaaaatgagtgaatGAATTGCATTGAGCTACCACGTGTATTTCCACTTTAACAAAATCTAATATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139379981 131 - 152096393 attgctaatatagcccaaacacttttcattttgtgtcacccttatcaggtgctgcctacatatttgtaaaatgaatgaatGAATTGCATTGAGCTATCGCATATATTTCCACTTTAACAAAATCTAATATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331427 131 + 70235451 attactaatataccccaaacacttttcattttgtctcacccatatcaggtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTATCACATATATTTCCACTTTAACAAAATCAAATACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022800 131 - 75711847 attactaatataccccaaacacttttcattttgtctcacccatatcaggtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTATCACATATATTTCCACTTTAACAAAATCAAATACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13575468 131 - 18804593 attactaatataccccaaacacttttcattttgtctcacccatatcaggtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTATCACATATATTTCCACTTTAACAAAATCAAATACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192283 131 + 18905526 attactaatataccccaaacacttttcattttgtctcacccatatcacgtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTATCACATATATTTCCACTTTAACAAAATCAAATACT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60021979 131 - 72318688 attactaatataccccaaacacttttcattttgtctcacccatatcaggtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTACCACATATATTTCCACTTTAACAAAATCAAATACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356031 131 - 1517660 attactaatataccccaaacacttttcattttgtctcacccatatcaggtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTGTCACATATATTTCCACTTTAACAAAATCAAATACT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456046 131 + 6513552 attactaatataccccaaacacttttcattttgtgtcacccatatcaggtgctgcctacatatttgtaaaatgagtgaatTAATTTCATTAAGCTATCACATATATTTCCACTTTCACAAAATCTAATACT i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1241734 131 - 1406956 attactaatatacttcaaaagcttttaactttgtctcacccatattaggtgtttcctgtgtatttttagaatgagtgaatGAATTGTATTGAGATATTATATATATTTTCACTTTAACAAAACCTAATATT i proCoq1.NW_012148742v1 I 100 I 562 s canFam3.chr1 112283794 127 - 122678785 attactaatatatcccaggtatttacaact---tctcccacgtagtaggtgttctcttcaaatttgtagaatgagtaaatGAATTCCATATAGAAACTATGTATATTTACACTTT-ATATAATCTAATATT i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=195912.000000 s hg38.chr18_GL383571v1_alt 42613 32 + 198278 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- s panTro5.chr18 64998759 32 + 78221452 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i panTro5.chr18 C 0 I 100 s panPan2.chr18 64121155 32 + 77229886 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340296 32 + 17472758 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139380112 32 - 152096393 GTAATAAAATAATTTCCTTACACTCCTGCAGG-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331558 32 + 70235451 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022931 32 - 75711847 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13575599 32 - 18804593 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192414 32 + 18905526 GTAATAAAATAATTTCCTTACGCTCCTTCAGG-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022110 32 - 72318688 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356162 32 - 1517660 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456177 32 + 6513552 GTAATAAAATAATTTCCTTACACTCCTTCAGG-- i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112283921 33 - 122678785 -TTAAAACATAATTTCTTTGGAACTTTTCCCATA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=361670.000000 s hg38.chr18_GL383571v1_alt 42645 68 + 198278 CAAGAAACATTGTTCTCAACTTTGCTTTAAATACTAAATTTTTACAATCTTGTATTACCTATCACTCA s panPan2.chr18 64121187 68 + 77229886 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTATTACCTATCACTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340328 68 + 17472758 CAAGAAACATTCTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTATTACCTATCACTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139380144 68 - 152096393 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTATTACCCATCACTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331590 68 + 70235451 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTGTTACCCATCACTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63022963 68 - 75711847 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTGTTACCCATCACTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13575631 68 - 18804593 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTGTTACCCATCACTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192446 68 + 18905526 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTGTTACCCATCACTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022142 68 - 72318688 CAAGAAACACTGTTCTCAACTTTGCTTTAAATAGTAAATTTTTACAATCTTGTATTACCCGTCACTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356194 68 - 1517660 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGTAAATTTTCACAATCTTGTGTTACCCATCACTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456209 68 + 6513552 CAAGAAACATTGTTCTCAACTTTGCTTTAAATAGCAAATTTTTACAATCTTGTATTACCCATCACTCA i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112283954 67 - 122678785 AAAGAAATAATGTCCTCAATTATGTTTTAAATAGTAGTTTTCCAACATTTCAT-TAATCGATTACTCA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e panTro5.chr18 64998791 100 + 78221452 I a score=738392.000000 s hg38.chr18_GL383571v1_alt 42713 167 + 198278 GAAAACAATTTGATATAA----AACTTATTTGGCAACATAATACTCAAATTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAACCAGATAAATTCATCATAGTGTTCTCTTTAGTTTTAGTGAAGGAACAAACAAAAGGCATATA----TATATATATA s panPan2.chr18 64121255 163 + 77229886 GAAAACAATTACATATAA----AACTTATGTGGCAACATAATACTCAACTTAGAAGAGTCATTAAATAGATCTTCTTGTCTTAACACTGAAAGGCTTAACCAGATAAATTCATCATAGTGTTCTTTTTAGTTTTAGTGAAGGAATAAACAAAAGACatata----tatata---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340396 161 + 17472758 GAAAACAATTTGATAT------AACTTATTTGGCAACATAATACTCAACTTAGAATAGTCGTTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAACCAGATAAATTCATCATAGTGTTCTTTTTAGTTTTAGTGAAGGAACAAACAAAAGGGatata----tatatt---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139380212 175 - 152096393 GAAAACAATTTGATATAAAACTAACTTTTTTGGCAACATAATACTCAACTTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGACTTAACCAGATAAATTCATCATAGTGCTCTTCTTAGTTTTAGTGAAGGAACAAACAAAAGGCatatatttttttatatata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331658 170 + 70235451 GAAAACAATTTAATATAAGACTAACTTATTTGGCAACCTAATACTCAACTTAGAATAGTCATTAAACAGATCTTATTGTCTTAACACTGAAAGGCTTAGCCAGATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCACATa----tatacatata i rheMac8.chr18 C 0 I 94 s macFas5.chr18 63023031 168 - 75711847 GAAAACAATTTAATATAAGACTAACTTATTTGGCAACCTAATACTCAACTTAGAATAGTCATTAAATAGATCTTATTGTCTT--CACTGAAAGGCTTAGCCAGATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCacata----tatacatata i macFas5.chr18 C 0 I 2 s macNem1.NW_012016688v1 13575699 170 - 18804593 GAAAACAATTTAATATAAGACTAACTTATTTGGCAACCTAATACTCAACTTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAGCCAGATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCacata----tatacatata i macNem1.NW_012016688v1 C 0 I 96 s cerAty1.NW_012001075v1 13192514 170 + 18905526 GAAAACAATTTAATATAAGACTAACTTATTTGGCAACCTAATACTCAACTTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAGCCAGATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCACATa----tatacatata i cerAty1.NW_012001075v1 C 0 I 98 s chlSab2.chr18 60022210 169 - 72318688 GAAAACAATCTGATATAAGACTAACTTATTTAGCAACCTAATACTCAACTTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAGCCA-ATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCACata----tatacatata i chlSab2.chr18 C 0 I 103 s manLeu1.NW_012106698v1 356262 170 - 1517660 GAAAACAATTTAATATAAGACTAACTTATTTGGCAACCTAATACTCAACTTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAGCCAGATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCACata----tatacatata i manLeu1.NW_012106698v1 C 0 I 98 s colAng1.NW_012115433v1 3456277 170 + 6513552 GAAAACAATTTGATATAAGACTAACTTATTTGGCAACGTAATACTCAACTTAGAATAGTCATTAAATAGATATTATTGTCTTAACACTGAAAGGCTTAGCCAGATAAATTCATCATAGTGCTCTTTTTAGTTTTAGTGAAGGAACCAAC-AAAGGCACata----tatacatata i colAng1.NW_012115433v1 C 0 I 103 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e panTro5.chr18 64998791 100 + 78221452 I a score=7004.000000 s hg38.chr18_GL383571v1_alt 42880 60 + 198278 TTTTTTATATATTATACATAT-TTTACATTAATATATAAT--------------------TTATTATATAC-TA--------------------ATTTTATA s panPan2.chr18 64121418 57 + 77229886 ----ttatatattat--atat-tttatattaatatataattt-----------------attattatatat-ta--------------------attttata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340557 55 + 17472758 --ttttatatattat--atat-tttatattaatatataattt-----------------attattatat-------------------------attttata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139380387 48 - 152096393 tgttttatatat-----atat-tttgtattaatatacaaat----------------------ttata--------------------------aatttata i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63023201 94 - 75711847 ---tatatacat-----atatatatgtatacataGAAAGTCTTACACAGCCAACAATAAATGACTATATATGTACTTCCCCACCAAAAAGAAACATTTTCTT i macFas5.chr18 I 2 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3456447 103 + 6513552 I e manLeu1.NW_012106698v1 356432 98 - 1517660 I e chlSab2.chr18 60022379 103 - 72318688 I e cerAty1.NW_012001075v1 13192684 98 + 18905526 I e macNem1.NW_012016688v1 13575869 96 - 18804593 I e rheMac8.chr18 57331828 94 + 70235451 I e panTro5.chr18 64998791 100 + 78221452 I a score=98367.000000 s hg38.chr18_GL383571v1_alt 42940 472 + 198278 AAatttaattatataaatatatatttttattaattatatataaata------------tatttattatacattatagttatatcatatttataattatattatatttatattatataatatataaatattacatttatatATGAATTAATTATATAAATATAT-AAAATAT-TTATATAAACATACACAAA--TATATAAAAATAT----ATACACATACACAAATATAT-ACAACATTTATATACACATACACAAATATATACAAACATTTATATACGCATACACAAATATATAAAAATAT---TTATATACGCATACACAA--------ATATATAAAAATATT-TACATACGCATACACAAATATATAAAAATATTTACATACGCATACACAA-ATATATACAAATATTTACATA-GCATACCCAAAAATATACAAATATTTACGTACGCATACACAA-ATACATAAAAATATT--TACGTACGCATATACAAATATATAAAAATAT---------- s panPan2.chr18 64121475 474 + 77229886 aaatttaattatataaatacata-tattattaatcatatataaatatataaatatttctatttattatatattgtatttatattatatttataa-----------ttatattatataatat-ttaatattatatttatatataaattaattatatagatatacaaaaatat-ttacatacacatatataaa--tatataaaaatatttacatacacatatataaatatataaaaatatttacatacacatatataaatatataaaaatatttacatacacatatat-aatatataaaaatat---ttacatacacatatataa--------atatat-aaaatatg-tatatacacatatgtaaatatataaaaatatgtatatacacatatataa-atatataaaaatatgtatatacacacatataaatatataaaaatatgtatatacacacatataa-atatataaaaatatg--tatatacacatat--aaatatataaaaatat---------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5340612 483 + 17472758 aaa-ttaattatatacatatat--ttttattagttatacataaatatataaatattcatatttattatatattgtatttatattatatttataattatattatatttatattacataatatatgaatattatatttatatatcaattaattatataaatatat-aaaatat-ttatatacgcatacatcaa--tatataaaaatatttatatacgcacatataaatacataaaaatatttatatacgcacacataaatacttaaaaatatttatatacgcacacataaatacataaaaatat---ttatacacgcatacataa--------atata--aaaatatt-tatatacgcatatataa--atataaaaatatgtatatatgcatacataa---atataaaaatatttatatacgcatatataaatatataaaaatgtttatatatgcatatataa-atacataaaaatatttatatatacgcatatataaatatatataaatat---------- i gorGor5.CYUI01014964v1 C 0 I 1818 s nomLeu3.chr4 139380435 404 - 152096393 aaattta-----ataaatatattatatatttaaaaatatat-aata------------tatttataataaa-------tatattatatatttaa---aaataaatatatatttaaaaatat----atattttatacatatactttctatgtatatagaaatat----atatattatatatacatatataaatgtatatagaaatat------------------atatat---------tatatatacatatataaatg------------tatatatgtatatat-aatatatagaaatatatattgtatatacatatataatacagattatatct-aatatattgtatat-----tgtatatttatata-------ttatatatttatatataatctatattatattatatac-----------------tataca-----ttatatatttatatataatctgtattatattata--tat---tatatattatattttatatatttattttatacttt i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3456447 103 + 6513552 I e manLeu1.NW_012106698v1 356432 98 - 1517660 I e chlSab2.chr18 60022379 103 - 72318688 I e cerAty1.NW_012001075v1 13192684 98 + 18905526 I e macNem1.NW_012016688v1 13575869 96 - 18804593 I e macFas5.chr18 63023295 0 - 75711847 C e rheMac8.chr18 57331828 94 + 70235451 I e panTro5.chr18 64998791 100 + 78221452 I a score=39485.000000 s hg38.chr18_GL383571v1_alt 43412 568 + 198278 TTACGTACGCATATAAAAATATATAACAATATTTATGTACGCATATACAAATATATAACAATATTTATGTACGCATATACAAATATATAACA-ATATTTATGTACGCATATACCA-ATATATAACAATATTAAATG-TACGCATATA---TAAATATATAACAATATT--TATGTACACatatatacatatataatatataaaaatatttatataattatatatacatatataaatctataaaaa--tatatatacatatataaatctataaa-----------tatatatacatatatGAATCTATAAAAATATTCATATATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATGAAAATATTCATGTATA--------CATATATAAATCTATGAAAATATTCATATATACATA-----TATACATATATA-------AAAATATTTATATATACA-TATATACATATATA-------AAAGTATTTATATAGACATATATAAAAATATTTATATATA---------CATATATAAAAATATTT s panPan2.chr18 64121949 556 + 77229886 gtatatacacatacataaatatataaacatatgtatatacacatacataaatatataaaaatatgtatatacacatacataaatatataaaa-atatgtatatacacatatataa-atatataaaaatagt-tata-tacacatcta---taaatatataaagatatttatatgtacttatatatacatatataa-acataaaaatat--------ttatatatacatatataaacataaaaatatttatatatacatatataaacataaaaa------taatttatatatacatatataaacatgt-aaaatatttatatatacatatataaacatgt-aaaatatttatatatacatatataaatatgt-aaaatatttatatatacatatataaatatgt-aaaatatttatatatacata-----------aaaaatatt-atatata--------catatat-aatatatgaaaatatttatatatacata-----tatacatatataatatatgaaaatatttatatataca-tatatacatatataatatatgaaaatatttatgtatacatatata--------catatata---------cacatgtaaaaatattt i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139380839 535 - 152096393 ttatatat---------aatatataa-tatatctatatat---------aatatatagt-atctttatata---------agatatattatatatctttatatat-tatatattatacgtataat-atattatatattatatatttattttatatatata-----atttctatgtatactttta-atatatattatatatttgtatat------tattatatat-tatatataaatatatattatattatatat-catatattattatatatgatatattatattatatataaatat-taaatatat-----tatttatatata-atatat-aatatat-aatatattattcattatatat---tatatattataatatatat-tat-tatatattattatac-atagtatttatatattt--------------tatattatt-atatatagtattcattatatat-tatatatgattatatata---gtacatattaattatatataaatatta----aatatattt-tatatatattaaaaatatacata-------GAAAGTCTTACACAGCCAACAATAAATGACTGTATATGTACTTCCTCACCAAAAAGAAAAATTCTT i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3456447 103 + 6513552 I e manLeu1.NW_012106698v1 356432 98 - 1517660 I e chlSab2.chr18 60022379 103 - 72318688 I e cerAty1.NW_012001075v1 13192684 98 + 18905526 I e macNem1.NW_012016688v1 13575869 96 - 18804593 I e macFas5.chr18 63023295 0 - 75711847 C e rheMac8.chr18 57331828 94 + 70235451 I e gorGor5.CYUI01014964v1 5341095 1818 + 17472758 I e panTro5.chr18 64998791 100 + 78221452 I a score=10003.000000 s hg38.chr18_GL383571v1_alt 43980 153 + 198278 ATATAGACATATATACATATATAAAAATATTTATATATACATATATAAAAATAT------TTATATAGACATATATACATATATAAAAATATTTATATAGACATATAAATATATAAAAATATTTATATAGAC--ATATAAATATGTGAAAATATTTATATA s panPan2.chr18 64122505 160 + 77229886 atatatacatatatacacatgtaaaaatatttatatatacatatatacacatgtaaattattatatatacatatatacatatgt-aaaatatttatatacatatatacatatgcaaaaatatttatatatacatatataaatatgtaaaaatatttatata i panPan2.chr18 C 0 I 409 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3456447 103 + 6513552 I e manLeu1.NW_012106698v1 356432 98 - 1517660 I e chlSab2.chr18 60022379 103 - 72318688 I e cerAty1.NW_012001075v1 13192684 98 + 18905526 I e macNem1.NW_012016688v1 13575869 96 - 18804593 I e macFas5.chr18 63023295 0 - 75711847 C e rheMac8.chr18 57331828 94 + 70235451 I e nomLeu3.chr4 139381374 0 - 152096393 C e gorGor5.CYUI01014964v1 5341095 1818 + 17472758 I e panTro5.chr18 64998791 100 + 78221452 I a score=0.000000 s hg38.chr18_GL383571v1_alt 44133 50092 + 198278 GACATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e colAng1.NW_012115433v1 3456447 103 + 6513552 I e manLeu1.NW_012106698v1 356432 98 - 1517660 I e chlSab2.chr18 60022379 103 - 72318688 I e cerAty1.NW_012001075v1 13192684 98 + 18905526 I e macNem1.NW_012016688v1 13575869 96 - 18804593 I e macFas5.chr18 63023295 0 - 75711847 C e rheMac8.chr18 57331828 94 + 70235451 I e nomLeu3.chr4 139381374 0 - 152096393 C e gorGor5.CYUI01014964v1 5341095 1818 + 17472758 I e panPan2.chr18 64122665 409 + 77229886 I e panTro5.chr18 64998791 100 + 78221452 I a score=105055.000000 s hg38.chr18_GL383571v1_alt 94225 22 + 198278 AAATTTATTCAATTAAGATTTC s panPan2.chr18 64123074 22 + 77229886 AAATTTATTCAATTCAGATTTC i panPan2.chr18 I 409 C 0 s gorGor5.CYUI01014964v1 5342913 22 + 17472758 AAATTTATTCAATTAAGATTTC i gorGor5.CYUI01014964v1 I 1818 C 0 s nomLeu3.chr4 139381374 22 - 152096393 AAATTTATTCCATTAAGATTCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331922 22 + 70235451 AAATTTATTCAATTAAGATTTC i rheMac8.chr18 I 94 C 0 s macFas5.chr18 63023295 22 - 75711847 AAATTTATTCAATTAAGATTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13575965 22 - 18804593 AAATTTATTCAATTAAGATTTC i macNem1.NW_012016688v1 I 96 C 0 s cerAty1.NW_012001075v1 13192782 22 + 18905526 AAATTTATTCAATTAAGATTTC i cerAty1.NW_012001075v1 I 98 C 0 s chlSab2.chr18 60022482 22 - 72318688 AAATTTATTCAATTAAGACTTC i chlSab2.chr18 I 103 C 0 s manLeu1.NW_012106698v1 356530 22 - 1517660 AAATTTATTCAATTAAGATTTC i manLeu1.NW_012106698v1 I 98 C 0 s colAng1.NW_012115433v1 3456550 22 + 6513552 AAATTTATTCAATTAAGATTTC i colAng1.NW_012115433v1 I 103 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284021 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e panTro5.chr18 64998791 100 + 78221452 I a score=192353.000000 s hg38.chr18_GL383571v1_alt 94247 39 + 198278 TTAATATCTGTACAAATAATGTATCAGGTGGCAAC--ACAT s panPan2.chr18 64123096 39 + 77229886 TTAATATCTGTACAATTAATGTATCTGGTGGCAAC--ACGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5342935 39 + 17472758 TTAATATCTGTACAAATAATGTATCAGGTGGCAAC--ACAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381396 41 - 152096393 TTAATATCTGTACAAATAATGTATCAGGTGGCAACatatat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331944 41 + 70235451 TTGATATCTGTACAAATAATGTATCAGGTGGCAACATATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023317 41 - 75711847 TTGATATCTGTACAAATAATGTATCAGGTGGCAACATATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13575987 41 - 18804593 TTGATATCTGTACAAATAATGTATCAGGTGGCAACATATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192804 41 + 18905526 TTGATATCTGTACAAATAATGTATCAGGTGGCAACATATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022504 41 - 72318688 TTGATATCTGTACAAATAATGTATCAGGTGGCAACATATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356552 41 - 1517660 TTGATATCTGTACAAATAATGTATCAGGTGGCAACATATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456572 41 + 6513552 TTAATATCTGTACAATTAATGTATCAGGTGGCAACATATAT i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112284021 40 - 122678785 TTAACACCCATTTGAGTAA-AAATCAGGCAGCAACTTGTAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1241865 562 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e panTro5.chr18 64998791 100 + 78221452 I a score=89560.000000 s hg38.chr18_GL383571v1_alt 94286 15 + 198278 AATTAAATATAAAAT s panPan2.chr18 64123135 15 + 77229886 AATTAAATATAAAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5342974 15 + 17472758 AATTAAATATAAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381437 15 - 152096393 aattaaatataaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57331985 15 + 70235451 AATTAAATATAAAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023358 15 - 75711847 AATTAAATATAAAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576028 15 - 18804593 AATTAAATATAAAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192845 15 + 18905526 AATTAAATATAAAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022545 15 - 72318688 AATTAAATATAAAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356593 15 - 1517660 AATTAAATCTAAAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456613 15 + 6513552 AATTAAATATAAAAA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1242427 15 - 1406956 AATTGAATATAAAAA i proCoq1.NW_012148742v1 I 562 C 0 s canFam3.chr1 112284061 13 - 122678785 AATTAAATACAGA-- i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e panTro5.chr18 64998791 100 + 78221452 I a score=207914.000000 s hg38.chr18_GL383571v1_alt 94301 29 + 198278 TACCTAT-TTTATCTAATTATTTATAAATT s panTro5.chr18 64998891 29 + 78221452 TACCTAT-TTTATCTAATTATTTATAAATT i panTro5.chr18 I 100 C 0 s panPan2.chr18 64123150 29 + 77229886 TACCTAT-TTTATCTAATTATTTATAAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5342989 29 + 17472758 TACCTAT-TTTATCTAATTATTTATAAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381452 29 - 152096393 tacctat-tttatataattatttataaatt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332000 29 + 70235451 TACCTAT-TTTATCTAATTATTTATAACTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023373 29 - 75711847 TACCTAT-TTTATCTAATTATTTATAACTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576043 29 - 18804593 TACCTAT-TTTATCTAATTATTTATAACTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192860 29 + 18905526 TACCTAT-TTTATCTAATTATTTATAACTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022560 29 - 72318688 TACCTAT-TTTATCTAATTATTTATAAATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356608 29 - 1517660 TACCTAT-TTTATCTAATTATTTATAACTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456628 29 + 6513552 TACCTAT-TTTATCTAATTATTTATAAATT i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1242442 29 - 1406956 TACATAT-TTTATCGAATTATTTATAAATT i proCoq1.NW_012148742v1 C 0 I 43 s canFam3.chr1 112284074 30 - 122678785 TGCCTGTAATTGTTTAATTATTCATAAGTT i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=258993.000000 s hg38.chr18_GL383571v1_alt 94330 42 + 198278 TAAGCTTTTTTACCTATTACATTCCAGATGCTATTTCATTTG s panTro5.chr18 64998920 42 + 78221452 TAAGCTTTTTTGCCTATTACATTCCATATGCTATTTCATTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123179 42 + 77229886 TAAGCTTTTTTGCCTATTACATTCCATATGCTATTTCATTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343018 42 + 17472758 TAAGCTTTTTTGCCTATTATATTCCATATGCTATTTCATTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381481 42 - 152096393 taaGCTTTTTTGCCTACTACATTCCATATGCTATTTCACTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332029 42 + 70235451 TAAGCTTCTTTGCCTACTACATTCCATATGCTATTTCACTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023402 42 - 75711847 TAAGCTTCTTTGCCTACTACATTCCATATGCTATTTCACTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576072 42 - 18804593 TAAGCTTCTTTGCCTACTACATTCCATATGCTATTTCACTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192889 42 + 18905526 TAAGCTTCTTTGCCTACTACATTCCATATGCTATTTCACTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022589 42 - 72318688 TAAGCTTCTTTGCCTATTACATTCCATATGCTATTTCACTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356637 42 - 1517660 TAAGCTTCTTTGCCTACTACATTCCATATGCTATTTCACTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456657 42 + 6513552 TAAGCTTCTTTGCCTACTACATTCCATATGCTATTTCACTTG i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112284104 42 - 122678785 CCAGTGCTTTTGACCACTACATTCCTTGTACTACTTTTATTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1242471 43 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=455997.000000 s hg38.chr18_GL383571v1_alt 94372 65 + 198278 TCTTACAATCTATGC-----TTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGAAATATTTGA s panTro5.chr18 64998962 65 + 78221452 TCTTACAATCTATGC-----TTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGAAATATTTGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123221 65 + 77229886 TCTTACAATCTATGC-----TTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGAAATATTTGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343060 65 + 17472758 TCTTACAATCTATGC-----TTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGAAATATTTGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381523 65 - 152096393 TCTTACAATCTATGC-----TTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATTAAATATTTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332071 70 + 70235451 TCTTACAATCTATGCTTGCATTGCATGTCAAATTTTTATAAATGAATTTGTTCTGTAATGGAATATTTGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023444 70 - 75711847 TCTTACAATCTATGCTTGCATTGCATGTCAAATTTTTATAAATGAATTTGTTCTGTAATGGAATATTTGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576114 70 - 18804593 TCTTACAATCTATGCTTGCATTGCATGTCAAATTTTTATAAATGAATTTGTTCTGTAATGGAATATTTGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13192931 70 + 18905526 TCTTACAATCTATGCTTGCATTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGGAATATTTGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022631 65 - 72318688 TCTTACAATCTATGC-----TCGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGGAATATTTGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356679 70 - 1517660 TCTTACAATCTATGCTTGCATTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGGAATATTTGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456699 65 + 6513552 TCTTACAATCTATGC-----TTGAATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGGAATATTTGA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1242514 65 - 1406956 TCTTACAAACCATGC-----TTGGACGTCAAATTTTTGTAACTGAATTTGCTCTTTAATGCAATATTTGA i proCoq1.NW_012148742v1 I 43 I 136 s canFam3.chr1 112284146 63 - 122678785 TCTTA-AAACTATAT-----ATAGATGTT-AACTTTTATAACTGAATTTGCTCTGCAATCCAATATCTAA i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=743528.000000 s hg38.chr18_GL383571v1_alt 94437 126 + 198278 AAAATAATTGCTTCCTACTGTGCATGATGAAATTCTTagagagagatagatgggagagttgatgaggaaagagaggggagaatggagaagagagagaAAAGGCAGGGGGACATATTTTA-GAGTAAT---- s panTro5.chr18 64999027 126 + 78221452 AAAATAATTGCTTCCTACTGTGCATGATGAAATTCTTagagagagatagatgggagagttgatgaggaaagagaggggagaatgaagaagagagagaAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123286 126 + 77229886 AAAATAATTGCTTCCTACTGTGCATGATGAAATTCTTagagagagatagatgggagagttgatgaggaaagagaggggagaatgaagaagagagagaAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343125 126 + 17472758 AAAATAATTGCTTCCTACTGTGCGTGATGAAATTCTTagagagagatagatgggagagttgatgaggaaagagaggggagaatgaagaagagagagaAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381588 126 - 152096393 AAAATAATTACTTCCTACTGTGCATGACGAAATTCTTagagagagatagatgggagaggtgatgaggaaagagaggggagaatgacgaagagagagaAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332141 126 + 70235451 ACAATAATTACTTCCTACTGTGCATAATTAAATTCTCAGAGAGAGACAGGTGGGAGAAGTGATGAGGAAAAAAAGGGGAGAATGAAGAAGAGAGAGGAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023514 126 - 75711847 ACAATAATTACTTCCTACTGTGCATAATTAAATTCTCAGAGAGAGACAGGTGGGAGAAGTGATGAGGAAAAAAAGGGGAGAATGAAGAAGAGAGAGGAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576184 126 - 18804593 ACAATAATTACTTCCTACTGTGCATAATTAAATTCTCAGAGAGAGACAGGTGGGAGAAGTGATGAGGAAAAAAAGGGGAGAATGAAGAAGAGAGAGGAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193001 126 + 18905526 ACAATAATTACTTCCTACTGTGCATAATTAAATTCTCAGAGAGAGACAGGTGGGAGAGGTGACGAGGAAAAAAAGGGGAGAATGAAGAAGAGAGAGGAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022696 126 - 72318688 ACAATAATTACTTCCTACTGTGCATAATTAAATTCTCagagagagacaggtgggagaggtgatgaggaaaaagaggggagaatgaagaagagagagGAAAGGTAGGGGGACATATTTTA-GAGTAAC---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356749 126 - 1517660 ACAATAATTACTTCCTACTGTGCATAATTAAATTCTCAGAGAGAGACAGGTGGGAGAGGTGATGAGGAAAAAAAGGGGAGAATGAAGAAGAGAGAGGAAAGGCAGGGGGACATATTTTA-GAGTAAT---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456764 126 + 6513552 ACAATAATTACTTCCTACTGTGCATAATGAAATTCTTagagagagacaggtgggagaggtgatgaggaaaaagagtggagaataaagaagagagagGAAAGGCAGGGGGACATATTTTA-GAGTAAC---- i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112284209 118 - 122678785 TCATGCATTACTTTCTAC--TGCACAACAGAATCCTTTGAGACAGATAGGAGG-------AATGGAGAGATAGAGGGGAGAAAGAAGAGAAAAGAGGAGTAGCAGG----CCTCTTTTGTAAGCAACACAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1242579 136 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=2786729.000000 s hg38.chr18_GL383571v1_alt 94563 419 + 198278 AGAGTCATATAAATGACATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaacccttgtccaaaacccttgggtccagatgtatttcaaaagtgcaaatatttcacacattaagaaattaatccagtgcatatactgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctgtaatcaagcaccttaatatacctgcaacaaaatTCGTGTGATGACTC-TTTTCAGTGGGGTCAATAGTCTATAATATATCGTAAGTACAAA--TAAGTGTATTGTGCATATGCTAATTAAAAGTACAGACTTCATTAAACTTCTGT----------------------------TATATAACAAAAATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTGTAATTAAATGGTTC s panTro5.chr18 64999153 418 + 78221452 AGAGTCATATAAATGACATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaacccttgtc-aaaacccttgggtccagatgtatttcaaaagtggaaatatttcacacattaagaaattaatccagtgcatatactgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctgtaatcaagcaccttaatatacctgcaacaaaatTCGTGTGATGACTC-TTTTCAGTGGGGTCAATAGTCTACAATATATCGTAAGTACAAA--TAAGTGTATTGTGCATATGCTAATTAAAAGTACAGGCTTAATTAAACTTCTGT----------------------------TACATAACAAATATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTATAATTAAATGGTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123412 418 + 77229886 AGAGTCATATAAATGACATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaacccttgtc-aaaacccttgggtccagatgtatttcaaaagtggaaatatttcacacattaagaaattaatccagtgcatatactgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctgtaatcaagcaccttaatatacctgcaacaaaatTCGTGTGATGACTC-TTTTCAGTGGGGTCAATAGTCTATAATATATCGTAAGTACAAA--TAAGTGTATTGTGCATATGCTAATTAAAAGTACAGGCTTAATTAAACTTCTGT----------------------------TATATAACAAATATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTATAATTAAATGGTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343251 418 + 17472758 AGAGTCATATAAATGACATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaacccttgtc-caaacccttgggtccagatgtatttcaaaagtggaaatatttcacacattaagaaattaatccagtgcatatactgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctgtaatcaagcaccttaatatacctgcaacaaaatTCGTGTGATGACTC-TTTTCAGTGGGGTCAATAGTCTATAATATATCGTAAGTACAAA--TAAGTGTATTGTGCATATGCTAATTAAAAGTACAGACTTCATTAAACTTCTGT----------------------------TATATAACAAAAATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTATAATTAAATGGTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139381714 418 - 152096393 AGAGTCATATAAATGACATTAGCATTACTAATTTTAAAGTGAAAAATTGATAcatgttcacaacccttgttgaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacacattaagaaattaatccagtgcatatattgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctgtaatcaagcaccttaatatacctgcaA-AAAATGCGTGTGATGACTC-TTTTCAGTGGAGTCAATACTCTATAATATATTGTAAGTACAAA--TAAGTGTATTGTGCATATGCTAATTAAAAGTACAGACTTCATCAAACTTCTGT----------------------------TACGTAACAAAAATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTATAATTAAATGGTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332267 418 + 70235451 GGAGTCATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacgcattacgaaattaatccagtgtatatattgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctataatcaagcaccctaatatacctgcaacaaaatgtgtgTGATGACTC-TTTTCAGTGGGGTCAATACTCTATAATATATCATACGTACAAA--TAAGTGTATTGTGCATATGCTAATTACAAGTGCAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAATTATAAATGATTTATTTTTATCTCTATGAGTGTATATTG-TTTATAAAAACATGGATTATAATTAAATGGTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63023640 418 - 75711847 GGAGTCATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacgcattacgaaattaatccagtgtatatattgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctataatcaagcaccctaatatacctgcaacaaaatgtgtgTGATGACTC-TTTTCAGTGGGGTCAATACTCTATAATATATCATACGTACAAA--TAAGTGTATTGTGCATATGCTAATTACAAGTACAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAATTATAAATGATTTATTTTTATCTCTATGAGTGTATATTG-TTTATAAAAACATGGATTATAATTAAATGGTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576310 408 - 18804593 GGAGTAATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacacattacgaaattaatccagcgtatatattgcaa----gttttggaacaa-cccagtgaagtctcaggtagtcccctctaatcaagcaccctaatatAT----------ATGTGTGTGATGACTC-TTTTCAGTGGGGTCAATACTCTATAATATATCATACGTACAAA--TAAGTGTATTGTGCATATGCTAATTACAAGTACAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAATTATAAATGATTTATTTTTATCTCTATGAGTGTATATTG-TTTATAAAAACATGGATTATAATTAAATGGTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193127 418 + 18905526 GGAGTCATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacgcattacgaaattaatccagtgtatatattgcaa----gttttggaacaa-cctagtgaagtctcaggtagtcccctataatcaagcaccctaatatacctgcaacaaaatgtgtgtgatgactc-ttttcagtggggtaaataCTCTATAATATATCATACGTACAAA--TAAGTGTATTGTGCATATGCTAATTACAAGTACAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAATTATAAATGATTTATTTTTATCTCTATGAGTGTATATTG-TTTATAAAAACATGGATTATAATTAAATGGTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60022822 414 - 72318688 GGAGTCATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaactcttggatccagatgtatttcaaaagtggaaatatttcacacattatgaaattaatccagtgtatatattgcaa----gttttgaaacaa-ccttgtgaagtctcaggtagtcccctataatcaagcaccctaatatacctgcaacaaaatgtgtgTGATGACTC-TTTTCAGTGGGGTCAATACTCTATAATATATCATACGTACAAA--TAAGTGTATTGTGCATATGCTAATTACAAGTACAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAATTATAAA----CTATTTTTATCTCTATGAGTGTATATTT-TTTATAAAAACATGGATTATAATTAAATGGTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 356875 418 - 1517660 GGAGTCATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacgcattacgaaattaatccagtgtatatattgcaa----gttttggaacaa-cctagtgaagtctcaggtagtcccctataatcaagcaccctaatatacctgcaacaaaatgtgtgTGATGACTC-TTTTCAGTGGGGTCAATACTCTATAATATATCATACGTACAAA--TAAGTGTATTGTGCATATGCTAATTACAGGTACAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAATTATAAATGATTTATTTTTATCTCTATAAGTGTATATTG-TTTATAAAAACATGGATTATAATTAAATGGTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3456890 418 + 6513552 GGAGTCATATAAATGAAATTAGCATTACTAATTTTAAAGTGAAAAATGGATAcatgttcacaaccattgtccaaaacccttgggtccagatgtatttcaaaagtggaaatatttcacacattaagtaattaatccagtgtatatattgcaa----gttttggaataa-cccagtaaagtctcaggtagtcccctataatcaagcaccttaatacacctgcaacaaaatgtgtgTGATGGCAC-TCTTCAGTGGGGTCAATACTCTATAATATATCATAAGTACAAA--TAAGCGTATTGTGCATATGCTAATTACAAGTACAGACTTCATTAAATTTCTGT----------------------------TATATAACAAAAAGTATAAACGATTTATTTTTATCTCTATGACTGTATATTG-TTTATAAAAACATAGATTATAATTAAATGATTC i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1242715 410 - 1406956 AGAGTCATATGAATGAAATCAGCATTACTAATCTCAAAGTGAAAAATGGATATaggcttacaatgcttgtccaaaacccttggaaccagatttacttcagaggtgaaaatatttcacactttatgaaagtaat-cagtgcatatattgtac----attttataaaaatcccagagaagtctcaggtagttccctaccatcaagtacattaatatatctgcaacaaaa--cgtgtgatcactc-atttaagtggggtcaataCTCTATAATACGTAATAAATACAAA--CAA--GTATTGTGCACATGCCAATTTTAAGTACAGAATCCATTACACTTGTGA----------------------------TATGTAACACGAATTGT----TGTTTCTTATTATCTCTATGAATGTATACTGTTTTGTGAAAATATGTGCTATGACTAAATAA-TC i proCoq1.NW_012148742v1 I 136 C 0 s canFam3.chr1 112284327 444 - 122678785 AAAGCCATATAAATGAGATTAACAGTAGTATCCTTGCACT-AATGACTGATAcaggtttataatcctcatccaaataccttgcagtcagattgacttcagaagtgcaaatgtttcac-ccttagtaatataatccaaagcacatatttttattgtgtttta----ag-cccaagaaggtttaaggtagttccctgcaatcaagtgcatcaatgtatctgcagcaaag--tatatgattactcattttaagtgggatcaacaTTCTATAATATGTAA-AAGTACAAATGTAAGCACATCGTGTATGCATGATTTACAAGTACAGAATCTATTACACTT-TGTATACACACACACACAAACACACCACACatatatataaatgattgttaataattttttattatCTCTATGGATGCATATTGTTTTGTCAAAACATGTGCTATGAATAAACAGTTC i canFam3.chr1 C 0 I 231 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=172672.000000 s hg38.chr18_GL383571v1_alt 94982 28 + 198278 CTCAAAGTTTATTCAATTAATTGAAGAC- s panTro5.chr18 64999571 28 + 78221452 CTCAAAGTTTATTCAACTAATTGAAGAC- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123830 28 + 77229886 CTCAAAGTTTATTCAACTAATTGAAGAC- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343669 28 + 17472758 CTCAAAGTTTATTCAATTAATTGAAGAC- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139382132 28 - 152096393 CTCAAAGTTTATTCAATTAATTGAAGAC- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332685 28 + 70235451 CTCGAAGTTTATTCAATTAATTGAAGCC- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024058 28 - 75711847 CTCGAAGTTTATTCAATTAATTGAAGCC- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576718 28 - 18804593 CTCGAAGTTTATTCAATTAATTGAAGCC- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193545 28 + 18905526 CTCGAAGTTTATTCAATTAATTGAAGCC- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023236 28 - 72318688 CTCAAAGTTTATTCAATTAATTGAAGCC- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357293 28 - 1517660 CTCGAAGTTTATTCAATTAATTGAAGCC- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457308 28 + 6513552 CTCGAAGTTTATTCAATTAATTGAAGCC- i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1243125 29 - 1406956 TTTGAAGTTTATTTGGTTAATTGAGGGCA i proCoq1.NW_012148742v1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112284771 231 - 122678785 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=516432.000000 s hg38.chr18_GL383571v1_alt 95010 74 + 198278 AGAATTACACATTAAAATTTGGAATGAATTGAACTATATAGAGTTATGAAAAAGTTAAAGACTCACAAGAATCT s panTro5.chr18 64999599 74 + 78221452 AGAATTCCACATTAAAATTTGGAATGAATTGAACTATATAGAGTTATGAAAAAGTTAAAGACTCACAAGAATCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123858 74 + 77229886 AGAATTCCACATTAAAATTTGGAATGAATTGAACTATATAGAGTTATGAAAAAGTTAAAGActcacaagaatct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343697 74 + 17472758 AGAATTACACATTAACATTTGGAATGAATTGAACTATATAGAGTTATGAAAAAGTTAAAGActcacaagaatct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139382160 74 - 152096393 AGAATTACACATTAAAATTTGGAATGAATTGAACTATATAGAGTTATGAAAACGTTAAAGACTCACAAGAATCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332713 74 + 70235451 AGAATACCACATTAAAATTCGGAATGAACTGAACTATACAGAATTATGAAAAAGTTAAAGActcacaagaatct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024086 74 - 75711847 AGAATACCACATTAAAATTCGGAATGAACTGAACTATACAGAATTATGAAAAAGTTAAAGACTCACAAGAATCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576746 74 - 18804593 AGAATACCACATTAAAATTCGGAATGAACTGAACTATACAGAATTATGAAAAAGTTAAAGActcacaagaatct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193573 74 + 18905526 AGAATACCACATTAAAATTCGGAATGAACTGAACTATACAGAATTATGAAAAAGTTAAAGActcacaagaatct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023264 74 - 72318688 AGAATACCACATTAAAATTCAGAATGAACTGAACTATACAGAATTATGAAAAAGTTAAAGACTCACAAGAATCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357321 74 - 1517660 AGAATACCACATTAAAATTCGGAATGAACTGAACTATACAGAATTATGAAAAAGTTAAAGActcacaagaatct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457336 74 + 6513552 AGAGTACCACATTAAAATTCGGAATGAACTGAACTATACAGAATTATGAAAAAGTTAGAGActcacaagaatct i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1243154 74 - 1406956 AGAATACTAAATTAAAATTTGGAATTACCTGAACTATACAGAGTTATGAAAAAGTTAAAGActctcacggatct i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112285002 74 - 122678785 aaaaTGTTAAATTAAAAATTACAATGACCTGAATTGTTGAAAGCTACGAACCAGTTATAGACCCTCAAGGATTT i canFam3.chr1 I 231 I 425 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=144510.000000 s hg38.chr18_GL383571v1_alt 95084 23 + 198278 TAGAAACTATTTGGGGAGACTCG s panTro5.chr18 64999673 23 + 78221452 TAGAAACTATTTGGGGAGACTCG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123932 23 + 77229886 tagaaactatttggggagactcg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343771 23 + 17472758 tagaaactatttggggagactcg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139382234 23 - 152096393 TAGAAACTATTTGGGGAGACTCG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332787 23 + 70235451 tagaatctatttggggagactcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024160 23 - 75711847 TAGAATCTATTTGGGGAGACTCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576820 23 - 18804593 tagaatctatttggggagactcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193647 23 + 18905526 tagaatctatttggggagactcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023338 23 - 72318688 TAGAATCTATTTGGGGAGACTCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357395 23 - 1517660 tagaatctatttggggagactcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457410 23 + 6513552 tagaatctatttggggagactcc i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1243228 23 - 1406956 tagaatctacttaggaagacaca i proCoq1.NW_012148742v1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112285076 425 - 122678785 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=1868790.000000 s hg38.chr18_GL383571v1_alt 95107 271 + 198278 ATGTATACATACAGAACAGTTTAAAAGTAACAAGATATTATGGAAATAACTGG-AAAA------------TAATATAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTAAAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAAGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTCACACAGAGGAAGAACCAGGACATTTCATTCCAGGTATGTGTATGCTACTACTTGGACATAGCT s panTro5.chr18 64999696 270 + 78221452 ATGTATACATACAGATCAGTTTAAATGTAACAAGATATTATGGAAATAACTGG-AAAA-------------AATGTAAATAGTACTTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTATAAATCGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAAGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAGGAAGAACCAGGACATTTCATTCCAGGTATATGTACGCTACTACTTGGACATAGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64123955 270 + 77229886 atgtatacatacagatcagtttaaatgtaacaagatattatggaaataactgG-AAAA-------------AATGTAAATAGTACTTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTATAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAAGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAGGAAGAACCAGGACATTTCATTCCAGGTATATGTACGCTACTACTTGGACATAGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5343794 270 + 17472758 atgtatacatacagaacagtttaaaagtaacaagatattatggaaataactgg-aaaa------------taatataaatagtaattttttcacagaggttgat---aggagtgattaccatagaacaataaggaaaatGTAAAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAAGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAGGAAGAACCAGGACA-TTCATTCCAGGTATGTGTATGCTACTACTTGGACATAGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139382257 270 - 152096393 ATGCACACATACAGATCAGTTTAAAAGTGACAAGATATTATAGAAATAACTGG-AAAA-------------AATATAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGTGCTTACCATAGAACAATAAGGAAAATGTATAAATCGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAAACCAAGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAGGAAGAACCAGGACACTTCATTCCAGGTATGTGTATGCTACTACTTGGACATAGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57332810 271 + 70235451 atgtatacatacagatcagtttaaaagtaacaaggtattatGGAAATACCAGGAAAAA-------------AATTTAAATAGTAATTTTTTCACAGAGGTTAAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTTCATTTCAGGTATGTTTATGCTACTACTTGGACATAGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024183 271 - 75711847 ATGTATACATACAGATCAGTTTAAAAGTAACAAGGTATTATGGAAATAACAGGAAAAA-------------AATTTAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTTCATTTCAGGTATGTTTATGCTACTACTTGGACATAGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13576843 271 - 18804593 atgtatacatacagatcagtttaaaagtaacaaggtattatggaaataaCAGGAAAAA-------------AATTTAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTTCATTTCAGGTATGTTTATGCTACTACTTGGACATAGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193670 270 + 18905526 atgtatacatacagatcagtttaaaagtaacaaggtattatggaaataactgG-AAAA-------------AATATAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTTCATTTCAGGTATGTTTATGCTACTTCTTGGACATAGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023361 270 - 72318688 ATGTATACATACAGATCAGTTTAAAAGTAACAAGGTATTATGGAAATAACTGG-AAAA-------------AATATAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGTGATTACCATAGAACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTTCATTTCAGGTATGTTTATGCTACTACTTGGACATAGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357418 270 - 1517660 atgtatacatacagatcagtttaaaagtaacaaggtattatggaaataacTGG-AAAA-------------AATATAAATAGTAATTTTTTCACAGAGGTTGAT---AGGAGAGATTACCATAGAACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACACAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTTCATTTCAGGTATGTTTATGCTACTACTTGGACATAGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457433 269 + 6513552 atgtatacatacagatcagtttaaaagtaacaaggtattatggaaataactgg-aaaa-------------aatataaatagtaattttttcacagaggttgat---aggactgattaccaTAG-ACAATAAGGAAAATGTACAAATTGAACTGGATAT-TTGGGAAATAAATGGGGAGGTGTTAAGACCAGGACAAAGGGACCA-----------TTT-------GGCTGAGTCAAGGTGTTACACAGAAGAAGAACCAGGACATTGCATTCCAGGTATATTTATGCTACTACTTGGACATAGCT i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1243251 291 - 1406956 atatatacataaagatcagtttaaaagtag-aaagtattacgggaataaatcc-aaaaatt-atggtacagattataagtagtaatgttttcacagaggtggat---cagagtgATTACAACAGGATAAAAAGGAAAATGTAAAAATTGAACTAGATG--TTGGGCAATAAATGGAGAGGTGTTAAGACATGAACAAAGGGACCATTTCTTCTAAGTTT-------GACTGAGTCAACCTGTTACACAGAGGGAGAACCAGAGCATTTTATCCTAGGTATGTTTATGCTATTATTTGGCCATAGCT i proCoq1.NW_012148742v1 C 0 I 217 s canFam3.chr1 112285501 290 - 122678785 ataCATATATAAAGATCAGTTTAAAAATAA-AATGTATTATGGGATTAAATGC-AAATAGTAATGATACAGATTATAAATGGTACTATTTTCTTAGAGGTTAATGTAGTAAATGGTTACAGTAGGATAATAAGGAAAATGTACAAAATGAACTGAATATATTGAGCAACAAAAGGAGAGGTGTTAAGACCAGGGCAAAGGGACCA-----------TTTGTTGATAGACTAGGTACACATGCTACATAT-GGGAGAACACAGAC-TTGTGCCCCAGGCATGTTTATGTTACTATTT-GATACAGTT i canFam3.chr1 I 425 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=1146019.000000 s hg38.chr18_GL383571v1_alt 95378 211 + 198278 ATGTCCaaaaaa----------aaaaa---aaaaaa-aaTCCTGACAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATAAGAAAGACATCT------TTATTTCATACTAACTTACCACATTGCAGCCAGTTTTTGCTTCTCACAAAATTCATTTTGAACTTTTTTCTTTAAGGAAGTTGCTACGTTTGTAATTACCAAACACCCAGTTACCAAGTTTATC s panTro5.chr18 64999966 209 + 78221452 ATGTCCaaaaaa----------aaaaa---aaaaaa---TCCTGACAAAATAAAATTACCTTTGTA-TTTTTTTGGTACAATAATGTGTAAGAAAGACATCT------TTATTTCATACTAACTTACCACATTGCAGCCAATTTTTGCTTCTCACAAAATTCATTTTGATCTTTTTTCTTTTAAGAAGTTGCTATGTTTGTAATTACCAAACACCCAGTTACCAAGTTTATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124225 208 + 77229886 ATGTCCAAAAAA----------AAAAA---AAAATA----CCTGACAAAATAAAATTACCTTTGTA-TTTTTTTGGTACAATAATGTGTAAGAAAGACATCT------TTATTTCATACTAACTTACCACATTGCAGCCAATTTTTGCTTCTCACAAAATTCATTTTGATCTTTTTTCTTTTAAGAAGTTGCTATGTTTGTAATTACCAAACACCCAGTTACCAAGTTTATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344064 211 + 17472758 ATGTCaaaaaaa----------aaaaa---aaaaaaaaaTCCTGACAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATAAGAAAGACATCT------TTATTTCATACTAACTTACCACATTGCAGCCAATTTTTGCTTCTCACAAAATTCATTTTGAAC-TTTTTCTTTAAGGAAGTTGCTACGTTTGTAATTACCAAACACCCAGTTACCAAGTTTATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139382527 210 - 152096393 ATGTCCaaaaaa----------aaaaa---aaaaaa--TTCCTGCCAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATAAGAAAGACATCT------TTATTTCATACTAACTTACCACATTGCAGCCAATTTTTGCTTCTCACAAAACTCATTTTGAACTTTTTTCTTTTAGGAAGTTGCTATGTTTGTAATTACCAAACACCCAGTTATTAAGTTTATC i nomLeu3.chr4 C 0 M 413 s rheMac8.chr18 57333081 206 + 70235451 ACGTTTAAA-------------AAAAA---AAAAAA----CCTGCCAAAATAAAATTACCTGTGTATTTTTTTTGGTATAATAATGTATGACAAAGACATAT------TTGTTTCATACTAACTTATCATATTGCAGCCAAATTTTACTTCTCACAAAATTCATTTTGAACTTTTTTCCTTTACGAAGTTGCTACGTTTGTAATTTCCAAACACCCAGTTACTAAGTTTATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024454 205 - 75711847 ACGTTTAAA-------------AAAAA---AAAAAA----CCTGCCAAAATAAAATTACCTGTGTA-TATTTTTGGTACAATAATGTATGACAAAGACATAT------TTGTTTCATACTAACTTATCATATTGCAGCCAAATTTTACTTCTCACAAAATTCATTTTGAACTTTTTTCCTTTACGAAGTTGCTACGTTTGTAATTTCCAAACACCCAGTTACTAAGTTTATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577114 218 - 18804593 ACGTTTaaaaaaaaaaaaaatcaaaaa---aaaaaa----CCTGCCAAAATAAAATTATCTGTGTA-TTTTTTTGGTACAATAATGTATGACAAAGACATAT------TTGTTTCATACTAACTTATCATATTGCAGCCAAATTTTACTTCTCACAAAATTCATTTTGAACTTTTTTCCTTTACGAAGTTGCTACGTTTGTAATTTCCAAACACCCAGTTACTAAGTTTATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13193940 210 + 18905526 ACGTaaaaaaaaaa--------aaaaa---aaaaaa----CCTGCCAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATGACAAAGACATAT------TTGTTTCATACTAACTTATCATATTGCAGCCAAATTTTACTTCTCACAAAATTCATTTTGAACTTTTTTCCTTTACGAAGTTGCTACGTTTGTGATTTCCAAACACCCAGTTACTAAGTTTATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023631 219 - 72318688 ACGTaaaaaaaacaaaacaa--aacaaaacaaaaaa----CCTGCCAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATGACAAAGACATAT------TTGTTTCATACTAACTTATCATATTGCAGCCAAATTTCACTTCTCACAAAATTCATTTTGAACTTTTTTCCTTTAAGAAGTTGCTACGTTTGTAATTACCAAACACCCAGTTACTAAGTTTATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357688 216 - 1517660 ACGTaaaaaagaaaaaaaca--aacaa---aaaaaa----CCTGCCAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATGACAAAGACATAT------TTGTTTCATACTAACTTATCATATTGCAGCCAAATTTTACTTCTCACAAAATTCATTTTGAACTTTTTTCCTTTACGAAGTTGCTACGTTTGTAATTTCCAAACACCCAGTTACTAAGTTTATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457702 217 + 6513552 ATGTAAaaacaaacaaacaaacaaaca---aaaaac----CCTGCCAAAATAAAATTACCTGTGTA-TTTTTTTGGTACAATAATGTATGACAAAGACATAT------TTATTTCATACTAACTTATCATATTGCAGCCAAATTTTACTTCTCACAAAATTCATTTTGAACTTTTTTCTTCTA-GAAGTTGCTATGTTTGTAATTACCAAACACCTAGTTACTAAGTTTATC i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112285791 201 - 122678785 --------------------GGGTCAA---AAAGAC----TCTGCCAAAAGGAGATTATTCGGAGA-TTTAAT--GCATAATTGTGTATGAAAAAGACATTTTGATCCTTATTTCACACTAACTTCTCCCATTACAGCAGACTTCTGCTTCCCACAAAATTCA-TTTAATCTTTTTGCTTTTATGAAGATGTTAATTTTATAATTACAAAAGACCCAGTTATGAAGTTTTTC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1243542 217 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=127677.000000 s hg38.chr18_GL383571v1_alt 95589 18 + 198278 ATTCCTCTTTCCCTT----------------GAA s panTro5.chr18 65000175 34 + 78221452 ATTCCTCTTTCCCTTAAATTTTATTACTAGTGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124433 34 + 77229886 ATTCCTCTTTCCCTTACATTTTATTACTAGTGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344275 18 + 17472758 ATTCCTCTTTCCCTT----------------GAA i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57333287 34 + 70235451 ATTCCTCTTTGCCTTAAATGTTACTATTAGTGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024659 34 - 75711847 ATTCCTCTTTGCCTTAAATGTTACTATTAGTGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577332 34 - 18804593 ATTCCTCTTTGCCTTAAATGTTACTATTAGTGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194150 34 + 18905526 ATTCCTCTTTGCCTTAAATGTTATTATTAGTGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023850 34 - 72318688 ATTTCTCTTTCCCTTAAATGTTATTATTAGTGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357904 34 - 1517660 ATTCCTCTTTCCCTTAAATGTTATTATTAGTGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457919 34 + 6513552 ATTCCTCTTTCCCTTAAATGTTATTATTAGTGAA i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112285992 34 - 122678785 ATTCCTCTTTCACCCAAATTCCATTACTAATCTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1243542 217 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e nomLeu3.chr4 139382737 413 - 152096393 M a score=162068.000000 s hg38.chr18_GL383571v1_alt 95607 27 + 198278 CCAAATGTATTATTAGTTAATAAAGCC s panTro5.chr18 65000209 27 + 78221452 CCAAATGTTTTATTAGTTAATAAAGCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124467 27 + 77229886 CCAAATGTTTTATTAGTTAATAAAGCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344293 27 + 17472758 CCAAATGTATTATTAGTTAATAAAGCC i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57333321 27 + 70235451 CCAAGTGTATTACTAGTTAATAAAGAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024693 27 - 75711847 CCAAATGTATTACTAGTTAATAAAGAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577366 27 - 18804593 ACAAATGTATTACTAGTTAATAAAGAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194184 27 + 18905526 CCAAATGTATTACTAGTTAATAAAGAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023884 27 - 72318688 CCAAATGTATTACTAGTTAATAAAGAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357938 27 - 1517660 CCAAATGTATTACTAGTTAATAAAGAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457953 27 + 6513552 CCAAATGTATTACTAGTTAATAAAGAC i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1243759 27 - 1406956 CCAAATGTATTATTAATTAATAAAGCA i proCoq1.NW_012148742v1 I 217 C 0 s canFam3.chr1 112286026 27 - 122678785 CCAAATGTATTATTAATTAAAAGAGCA i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e nomLeu3.chr4 139382737 413 - 152096393 M a score=176497.000000 s hg38.chr18_GL383571v1_alt 95634 25 + 198278 TTTGTATAATGAATCACAACACAAA s panTro5.chr18 65000236 25 + 78221452 TTTGCATAATGAATCACAACACAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124494 25 + 77229886 TTTGCATAATGAATCACAACACAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344320 25 + 17472758 TTTGTATAATGAATCACAACACAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383150 25 - 152096393 TTTGTATAATGAATCACAACACAAA i nomLeu3.chr4 M 413 C 0 s rheMac8.chr18 57333348 25 + 70235451 TTTGTATAATGAATCACAACACAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024720 25 - 75711847 TTTGTATAATGAATCACAACACAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577393 25 - 18804593 TTTGTATAATGAATCACAACACAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194211 25 + 18905526 TTTGTATAATGAATCACAACACAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023911 25 - 72318688 TTTGTATAATGAATCACAACACAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357965 25 - 1517660 TTTGTATAATGAATCACAACACAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3457980 25 + 6513552 TTTGTATAATGAATCACAACACAAA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1243786 25 - 1406956 TTAGTATAAAGAATTGCAACATAAA i proCoq1.NW_012148742v1 C 0 I 277 s canFam3.chr1 112286053 23 - 122678785 TTAGCATAACAGATTGCAACAAA-- i canFam3.chr1 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=1509420.000000 s hg38.chr18_GL383571v1_alt 95659 249 + 198278 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCGAATATTCATATTCTCCAGGAATGAGCAGAGTAAAGTGCTTTTATTTTTAAAT------AAGCACATAGGTTATGATTGCACATGGTTTACCTAACGGATGTTGCCGAATCCCGTAACATGTTACCCCAGGCTTCC-----CAACACATGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATGGTCAACGTGCAATTGGAATAGGTTtata s panTro5.chr18 65000261 249 + 78221452 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATAATTTGCATATTCATATTCTCCAGGAATGAGCAGAGTAAAGGGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTGCACATGGTTTACCTAACGGATGTTGCCGACTCCCGTAACATGTTACCCCGGGCTTCC-----CAACACATACCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATGGTCAACGTGCAATTGGAATAGGTTtata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124519 249 + 77229886 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATAATTTGCATATTCATATTCTCCAGGAATGAGCAGAGTAAAGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTGCACATGGTTTACCTAACGGATGTTGCCGACTCCCGTAACATGTTACCCCGGGCTTCC-----CAACACATACCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATGGTCAACGTGCAATTGGAATAGGTTtata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344345 249 + 17472758 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCGAATATTCATATTCTTCAGGAATGAGCAGAGTAAAGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTGCACACGGTTTACCTAACGGATGTTGCCGAATCCCGTAACATGTTACCCCAGGCTTCC-----CAACACATGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATGGTCAACGTGCAATTGGAATAGGTTtata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383175 249 - 152096393 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCGAATATTCATATTCTCCAGGAATGAGCAGAGTAATGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTACGCATGGCTTACCTAACGGATGTTGCCGAATCCTGTAACATGTTACCCCAGGCTTCC-----CAACACATGCCTGATCCTTTAGTATCTCATACCCAG-GAGTAATAGTCAACGTGCAATTGGAATAGGTTtata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333373 249 + 70235451 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----CAACACGTGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATAGTCAACATGCAATTGGAATAGGTTTACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024745 249 - 75711847 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----CAACACGTGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATAGTCAACATGCAATTGGAATAGGTTTACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577418 249 - 18804593 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACATGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----CAACACGTGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATAGTCAACATGCAATTGGAATAGGTTTACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194236 249 + 18905526 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----CAACACGTGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATAGTCAACATGCAATTGGAATAGGTTTACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60023936 249 - 72318688 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACGTGCTTTTATTTTTAAAT------AAGCAAATAGGTTATGATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----CAACACATGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATAGTCAACATGCAATTGGAATAGGTTTACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 357990 249 - 1517660 TCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTATGATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----GAACACATGCCTGATCCTTTAGTAGCTCATACCCAG-GAGTAATAGTCAACATGCAATTGGAATAGGTTTACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458005 249 + 6513552 CCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCAAATATTCATATTCTCCAGGAATGAGCAGACTGACGTGCTTTTATTTTTAAAT------AAGCAGATAGGTTACAATTATGCATGGTTTACCTAACGGATGTTGCCGAATCCCCTTACATGTTACCCCAGGCTTCC-----CAACACGTGCCTGATCCTTTAGTAGCTCATACCCAG-GAGCAATAGTCAACACGCAATTGGAATAGGTTTACA i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112286076 228 - 122678785 ACAGCAAATCAGAAAATAT------------------GGATTACTTGAAACATTCATATGCTCAGAGAATGAG-----------GATTTCTTTTCTAGATAATGAGAAGCAGGTAAGTCATGATTACATCTGA-TTACCTGACAGATCTTACAAAATCCCGTAACACTT---CTCAGCCTACCATCTGCATCCCATAGGTAATCCTCTACTAGCTCATACCCAGTGTGTAATATTCAATATGTAAGTCATAGAGGTCTATA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1243811 277 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=140832.000000 s hg38.chr18_GL383571v1_alt 95908 31 + 198278 aattagtatatatgtatatatatatagtata s panTro5.chr18 65000510 31 + 78221452 aattagtatatatgtatatatatatagtata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124768 31 + 77229886 aattagtatatatgtatatatatatagtata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344594 31 + 17472758 aattagtatatatgtatatatatattgtata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383424 29 - 152096393 aattagtatatatgtatatatata--gtata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333622 31 + 70235451 GATTAGtatatttgtatatatatattgtata i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63024994 29 - 75711847 GATTAGtatatatg--tatatatattgtata i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577667 29 - 18804593 GATTAGtatatatg--tatatatattgtata i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194485 29 + 18905526 GATTAGtatatatg--tatatatattgtata i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024185 29 - 72318688 AATTAGTATGTATG--TATATATATTGTATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358239 29 - 1517660 GATTAGtatatatg--tatatatattgtata i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458254 29 + 6513552 AATTAGtatatatg--tatatatactgtata i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1243811 277 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=953284.000000 s hg38.chr18_GL383571v1_alt 95939 166 + 198278 aaaataaagatatTGCACCTATTTTTAAAC-TTCTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTGAATCATTGATTGA-TTTTTTTTAATTGTTCATGTAATCTTTTGTATGGCATGACTGTCACAAGTGAAAGATTAT-CCTTTCTCAGGTA s panTro5.chr18 65000541 164 + 78221452 aaaataaagatatTGCACCTATTTTTAAAC-CTCTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTGAATCATTGATT---TTTTTTTAAATTGTTCACGTAATCTTTTGTATTGCATGACTGTCACAAGTGAAAGATTAT-CCTTTCTCAGGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124799 164 + 77229886 aaaataaagatatTGCACCTATTTTTAAAC-CTCTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTGAATCATTGATT---TTTTAAAAAATTGTTCACGTAATCTTTTGTATGGCATGACTGTCACAAGTGAAAGATTAT-CCTTTCTCAGGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344625 167 + 17472758 aaaataaagatatTGCACCTATTTTTAAAC-TTCTTGCCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTGAATCATTGATTGATTTTTTTTTAATTGTTCACGTAATCTTTTGTATGGCATGACTGTCACAAGTGAAAGATTAT-CCTTTCTCAGGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383453 158 - 152096393 aaaataaagatatTGCACCTATTTTTAAAC-TTCTTACCACGCAATAAATTATAACATAAAT----TATCATTAACTTCGAAATCATTG--T---TTTTTTTTAATTTTTCACATAATCTTTTGTACGGCATGACTGTCACAAGTGAAAGATTAT-CCTTTCTCAGGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333653 166 + 70235451 aaaataaagatatTGCACCTATTTTTAAAC-TTGTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTAAATCATTTATTGATTTTTTTAAAATTGTTCATGTAATCTTTTGTATGACATGACTGTCACAAGAGAA--TTTATACCATTCTCAGGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025023 166 - 75711847 aaaataaagatatTGCACCTATTTTTAAAC-TTGTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTAAATCATTTATTGATTTTTTTAAAATTGTTCATGTAATCTTCTGTATGACATGACTGTCACAAGAGAA--TTTATACCATTCTCAGGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577696 166 - 18804593 aaaataaagatatTGCACCTATTTTTAAAC-TTGTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTAAATCATTTATTGATTTTTTTTAAATTGTTCATGTAATCTTTTGTATGACATGACTGTCACAAGAGAA--TTTATACCATTCTCAGGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194514 166 + 18905526 aaaataaagatatTGCACCTATTTTTAAAC-TTCTTACCAAGCAATAAATTATAACATAAATTATCCATCATTAACTTCTAAATCATTTATTGATTTTTTTTAAATTGTTCATGTAATCTTTTGTATGACATGACTGTCACAAGAGAA--TTTATACCATTCTCAGGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024214 163 - 72318688 CAAATAAAGATATTGCACCTATTTTTAAAC-TTCTTACCAAGCAATAAATTATAACATAAATGATCTATC---AACTTCTAAATCATTTATTGATTTTTAAAAAATTGTTCCTGTAATCTTTTGTATGACATGATTGTCACAAGAGGA--TTTATACCATTCTCAGGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358268 166 - 1517660 aaaataaagatatTGCACCTATTTTTAAAC-TTCTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTAAATCATTTATTGATTTTTTTTAAATTGTTCATGTAATCTTTTGTATGACATGACTGTCACAAGAGAA--TTTATACCATTCTCAGGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458283 166 + 6513552 aaaataaagatatTGCGCCTATTTTTAAAC-TTCTTATCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTAAATCATTTATTGATTTTTTTAAAATTGTTCATGTAATCTTTTGTATGACATGACTGTCACAAGAGAA--TTTATACCATTCTCAGGTA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1244088 166 - 1406956 AAAATAAAGATACTGCACCTATTTTTATGCTTTTTTACCAAGCAATAAGTTATAACACAAATTATCTACCATTAACTTCTAAATCATTTACTTATTTTTTT--AATTGTTTGTGTAATCTTTTACCTGGCATGACTGTCACCAGTAAAAGGTGAT-CCTTTCTCAAGTA i proCoq1.NW_012148742v1 I 277 I 46 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=233045.000000 s hg38.chr18_GL383571v1_alt 96105 46 + 198278 GGAGATGATATACATAAACTCGTTAACATTTTCTAAAGACTTTGCC s panTro5.chr18 65000705 46 + 78221452 GGAGATGATATACATAAACTCATTAACATTTTCTAAAGACTTTGCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64124963 46 + 77229886 GGAGATGATATACATAAACTCATTAACATTTTCTAAAGACTTTGCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344792 46 + 17472758 GGAGATGATATACATAAACACATTAACATTTTCTAAAGACTTTACC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383611 46 - 152096393 GGAGATGATATAAATAAACTCATTAACATTTTCTAAAGACTTTGCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333819 46 + 70235451 TGAGATAGTATAAATAAACTCATTAAAATTTTCTAAAGATTTTTCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025189 46 - 75711847 TGAGATAGTATAAATAAACTCATTAAAATTTTCTAAAGATTTTTCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577862 46 - 18804593 TGAGATAGTATAAATAAACTCATTAAAATTTTCTAAAGATTTTTCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194680 46 + 18905526 TGAGATAGTATAAATAAACTCATTAAAATTTTCTAAAGATTTTTCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024377 46 - 72318688 TGAGATGGTATAAACAAACTCATTAAAATTTTCTACAGATTTTTCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358434 46 - 1517660 TGAGATAGTATAAATAAACTCATTAAAATTTTCTAAAGATTTTTCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458449 46 + 6513552 TGAGATGGTATAAATAAACTCATTAAAATTTTCTAAAGATTTTTCC i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1244254 46 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=335467.000000 s hg38.chr18_GL383571v1_alt 96151 53 + 198278 ATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAATAATTCTCT s panTro5.chr18 65000751 53 + 78221452 ATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAATAATTCTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125009 53 + 77229886 ATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAATAATTCTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344838 53 + 17472758 ATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAATAATTATCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383657 53 - 152096393 ATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAACAATTCTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333865 52 + 70235451 ATTACATTAATAATGATTAGAAAAC-AAATTTCAAGTTGGAGAATAATTCTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025235 52 - 75711847 ATTACATTAATAATGATTAGAAAAC-AAATTTCAAGTTGGAGAATAATTCTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577908 52 - 18804593 ATTACATTAATAATGATTAGAAAAC-AAATTTCAAGTTGGAGAATAATTCTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194726 52 + 18905526 ATTACATTAATAATGATTAGAAAAC-AAATTTCAATTTGGAGAATAATTCTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024423 52 - 72318688 ATTACATTAATAATGATTAGAAAAC-AAATTTCAATTTGGAGAATAATTCTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358480 52 - 1517660 ATTACATTAATAATGATTAGAAAAC-AAATTTCAATTTGGAGAATAATTCTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458495 52 + 6513552 ATTACATTAATAATGGTTAGAAAAC-AAATTTCAATTTGGAGAATAATTCTCT i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1244300 53 - 1406956 ATTACATTGATAATGATTAGAAAACAAAATCTCAATTCCTAGGACAATTCTCT i proCoq1.NW_012148742v1 I 46 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11213094 588 - 20685099 I e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=76198.000000 s hg38.chr18_GL383571v1_alt 96204 12 + 198278 TATGATCTATGA s panTro5.chr18 65000804 12 + 78221452 TATGATCTATGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125062 12 + 77229886 TATGATCTATGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344891 12 + 17472758 TATGATCTATGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383710 12 - 152096393 TATCATCTATGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333917 12 + 70235451 CATCATCTATGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025287 12 - 75711847 CATCATCTATGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577960 12 - 18804593 CATCATCTATGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194778 12 + 18905526 CATCATCTATGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024475 12 - 72318688 TATCATCTATGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358532 12 - 1517660 CATCATCTATGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458547 12 + 6513552 CATCATCTATGA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1244353 12 - 1406956 TATCATCTGTGA i proCoq1.NW_012148742v1 C 0 I 120 s otoGar3.GL873546 11213682 12 - 20685099 TACAATTTATAT i otoGar3.GL873546 I 588 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=646216.000000 s hg38.chr18_GL383571v1_alt 96216 115 + 198278 ---AAAAAATATATTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATACCAGCAATAAAATTCAAAATAGTGTGTATAACGTGTGTAAACATATTTACAAGTACTTGATATATC s panTro5.chr18 65000816 114 + 78221452 ---AAAAA-TATATTTTTATTATGCTAAACTCTCTCAT------ATTCTTCAAAAATACCAGCAATAAAATTCAAAATAGTGTGTATAATGTGTGTAAACATATTTACAAGTACTTGGTATATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125074 114 + 77229886 ---AAAAA-TATATTTTTATTATGCTAAACTCTCTCAT------ATTCTTCAAAAATACCAGCAATAAAATTCAAAATAGTGTGTATAATGTGTGTAAACATATTTACAAATACTTGATATATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5344903 114 + 17472758 ---AAAAA-TATATTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAATTACCAGCAATAAAATCCAAAATAGTGTGTATACTGTGTGTAAACATATTTACAAGTACTTGATATATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383722 114 - 152096393 ---AAAAA-TACATTTTTATTATGCGAAACTATCTCAT------ATTCTTCAAAAATACCAGCAATAAAATTCAAAATAGTGTGTATAATGTGTGTAAACATATTTACAAATACTTGATATATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57333929 113 + 70235451 ---AAATA-TAT-TTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGTGTGTAAACATATTTACAAGTACTTAATATCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025299 113 - 75711847 ---AAATA-TAT-TTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGTGTGTAAACATATTTACAAGTACTTAATATCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13577972 113 - 18804593 ---AAATA-TAT-TTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGTGTGTAAACATATTTACAAGTACTTAATATCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194790 113 + 18905526 ---AAATA-TAT-TTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGCGTGTAAACATATTTACAAGTACTTAATATCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024487 113 - 72318688 ---AAATA-TAT-TTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGCATGTAAACATATTTACAAGTACTTAATATCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358544 113 - 1517660 ---AAATA-TAT-TTTTTATTATGCTAAACTATCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGTGTGTAAACATATTTACAAGTACTTAATATCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458559 113 + 6513552 ---AAATA-TAT-TTTTTATTACGCTAAACTCTCTCAT------ATTCTTCAAAAATGCCAGCAATAAAATTCAAAATATTGTGTATAATGTGTGTAAACATATATACAAGTACTTAATATCTC i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11213694 121 - 20685099 GACAATTA-GTCACTATTTTCTTTCTGAATTCTCTCATAATTACATTATGCTAGAATAATAGCAATAACATATAAACTATTGTGTGTACTGTGTATAAATATAC-TAAAAGTATCCAATATAT- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1244365 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=447716.000000 s hg38.chr18_GL383571v1_alt 96331 62 + 198278 TTATTTATCAAGTCAAAAAAGTCACACTTGGGAGTATCATTTTTAATTAGTTGCTTTAATTT s panTro5.chr18 65000930 62 + 78221452 TTATTTATCAAGTCAAAAAAGTCACATTTGGGAGTATCATTTTTAATTAGTTGCTTTAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125188 62 + 77229886 TTATTTATCAAGTCAAAAAAGTCACATTTGGGAGTATCATTTTTAATTAGTTGCTTTAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345017 62 + 17472758 TTATTTATCAAGTCAAAAAAGTCACATTTGGGAGTATCATTTTTAATTAGTTGCTTTAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383836 62 - 152096393 TTATTTATCAAGTCAAAAAAGTCACATTTGGGAGTATCATTTTTAATTAGTTGCATTAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334042 62 + 70235451 TTATTTATCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTCAATTAGTTGCTTTCATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025412 62 - 75711847 TTATTTATCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTCAATTAGTTGCTTTCATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578085 62 - 18804593 TTATTTATCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTCAATTAGTTGCTTTCATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194903 62 + 18905526 TTATTTATCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTCAATTAGTTGCTTTCATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024600 62 - 72318688 TTATCTGTCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTTAATTAGTTGCTTTCATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358657 62 - 1517660 TTATTTATCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTCAATTAGTTGCTTTCATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458672 62 + 6513552 TTATTTATCAAGTCAAAAATGTCACATTTGGGAGTATCATTTTTAATTAGTTGCTTTCATTT i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1244485 62 - 1406956 TTATTTAACAAGTCACAAAAATCACATCTGGAAGTGTCATTTTGAATGAGTTGCTTTAATtt i proCoq1.NW_012148742v1 I 120 I 447 s otoGar3.GL873546 11213815 61 - 20685099 -TATTTCCTAAGTCACAAAAATCACATTTGTACATGTCATTTTGAATTAATTTCTTTAATTT i otoGar3.GL873546 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=484318.000000 s hg38.chr18_GL383571v1_alt 96393 88 + 198278 CAACATTTTTTGTTTATATTTATCCACAGAATTTCGGAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAATAAAA s panTro5.chr18 65000992 84 + 78221452 CAACGTTTTCTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAA----A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125250 84 + 77229886 CAACGTTTTCTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAA----A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345079 88 + 17472758 CAACGTTTTTTGTTTATATTTATCCACAGAATTTCGGAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAATAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383898 84 - 152096393 CAACATTTTTTGTTTATATTTATCCACAGAATTTCATAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAA----A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334104 87 + 70235451 CAATATTTGTTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTA-TTTTAAGACTAAATACATATTAAAATACATAAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025474 87 - 75711847 CAATATTTGTTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTA-TTTTAAGACTAAATACATATTAAAATACATAAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578147 87 - 18804593 TAATATTTGTTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTA-TTTTAAGACTAAATACATATTAAAATACATAAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13194965 87 + 18905526 CAATATTTGTTGTTTATATTTATCCACAGAATTTCGCAGACATTATTTTGTTA-TTTTAAGACTAAATACATATTAAAATACATAAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024662 87 - 72318688 CAATATTTGTTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTA-TTTTAAGACTAAATACATATTAAAATACATAAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358719 83 - 1517660 CAATATTTGTTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTATTA-TTTTAAGAC----TACATATTAAAATACATAAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458734 87 + 6513552 CAATATTTGTTGTTTATATTTATCCACAGAATTTCACAGACATTATTTTGTTA-TTTTAAGACTAAATACATATTAAAATACATAAAA i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11213876 88 - 20685099 TGATACTTTCGGTTTATATTTATCCACAGAATTTCACAAATATGATATTTTTAGTTTAGAGACCAGATATACATTATGATAAATATAT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1244547 447 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=355085.000000 s hg38.chr18_GL383571v1_alt 96481 48 + 198278 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTGTCATCAGGCA s panTro5.chr18 65001076 48 + 78221452 TGAAAGATCCTAATCATTTATTATGATTTACATGTTTGTCATCAGGCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125334 48 + 77229886 TGAAAGATCCTAATCATTTATTATGATTTACATGTTTGTCATCAGGCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345167 48 + 17472758 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTGTCATCAGGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139383982 48 - 152096393 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTGTCATCAGGCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334191 48 + 70235451 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTCTCATCAGGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025561 48 - 75711847 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTCTCATCAGGCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578234 48 - 18804593 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTCTCATCAGGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13195052 48 + 18905526 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTCTCATCAGGCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60024749 48 - 72318688 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTCTCATCAGGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358802 48 - 1517660 TGAAAGATCCTAAATATTTATTATTATTTACATGTTTCTCATCAGGCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3458821 48 + 6513552 TGAAAGATCCTAAATATTTATTATGATTTACATGTTTCTCTTCAGGCA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1244994 48 - 1406956 TGAAAGACCTTAAACATTTATTATTATTTACATGTTTGTTATCAGGCA i proCoq1.NW_012148742v1 I 447 I 120 s otoGar3.GL873546 11213964 48 - 20685099 TGGAATATCTTAAACATTTATTTTTATTTACTTTCTTGTTATCAGGCA i otoGar3.GL873546 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=23454.000000 s hg38.chr18_GL383571v1_alt 96529 4 + 198278 GTAA s panTro5.chr18 65001124 4 + 78221452 GTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125382 4 + 77229886 GTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345215 4 + 17472758 GTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139384030 4 - 152096393 GTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334239 4 + 70235451 GTGA i rheMac8.chr18 C 0 I 319 s macFas5.chr18 63025609 4 - 75711847 GTGA i macFas5.chr18 C 0 I 319 s macNem1.NW_012016688v1 13578282 4 - 18804593 GTGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13195100 4 + 18905526 GTGA i cerAty1.NW_012001075v1 C 0 I 316 s chlSab2.chr18 60024797 4 - 72318688 GTGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 358850 4 - 1517660 GTGA i manLeu1.NW_012106698v1 C 0 I 314 s colAng1.NW_012115433v1 3458869 4 + 6513552 GTGA i colAng1.NW_012115433v1 C 0 I 315 s otoGar3.GL873546 11214012 4 - 20685099 ATGA i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=70518.000000 s hg38.chr18_GL383571v1_alt 96533 10 + 198278 AGGCATTttt s panTro5.chr18 65001128 10 + 78221452 AGGCATTTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125386 10 + 77229886 AGGCATTTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345219 10 + 17472758 AGGCATTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139384034 10 - 152096393 AGGCATTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334562 10 + 70235451 AGGCATTTTT i rheMac8.chr18 I 319 C 0 s macFas5.chr18 63025932 10 - 75711847 AGGCattttt i macFas5.chr18 I 319 C 0 s macNem1.NW_012016688v1 13578286 10 - 18804593 AGGCATtttt i macNem1.NW_012016688v1 C 0 I 330 s cerAty1.NW_012001075v1 13195420 10 + 18905526 AGGCATTTTT i cerAty1.NW_012001075v1 I 316 C 0 s chlSab2.chr18 60024801 10 - 72318688 AGGCAttttt i chlSab2.chr18 C 0 I 637 s manLeu1.NW_012106698v1 359168 10 - 1517660 AGGCattttt i manLeu1.NW_012106698v1 I 314 C 0 s colAng1.NW_012115433v1 3459188 10 + 6513552 AGGCATTTTT i colAng1.NW_012115433v1 I 315 C 0 s otoGar3.GL873546 11214016 10 - 20685099 ATGCATTTTT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=40101.000000 s hg38.chr18_GL383571v1_alt 96543 14 + 198278 atttaatattattt--- s panTro5.chr18 65001138 14 + 78221452 ATATAATATTATTT--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125396 14 + 77229886 ATATAATATTATTT--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345229 14 + 17472758 ATATAATATTATTT--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139384044 14 - 152096393 ATTTAATATTAttt--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334572 14 + 70235451 ATAAACTATTATTG--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025942 14 - 75711847 ataaactattattg--- i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13195430 14 + 18905526 ATATACTATTATTG--- i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 359178 14 - 1517660 atatactattattg--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459198 14 + 6513552 ATATACTATTATTG--- i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11214026 17 - 20685099 ACATGATATTATACAAT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e chlSab2.chr18 60024811 637 - 72318688 I e macNem1.NW_012016688v1 13578296 330 - 18804593 I a score=14389.000000 s hg38.chr18_GL383571v1_alt 96557 4 + 198278 -ttat s panTro5.chr18 65001152 4 + 78221452 -TTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125410 4 + 77229886 -TTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345243 4 + 17472758 -TTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139384058 4 - 152096393 -ttat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334586 4 + 70235451 -TTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025956 4 - 75711847 -ttat i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13195444 4 + 18905526 -TTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60025448 4 - 72318688 -ttat i chlSab2.chr18 I 637 C 0 s manLeu1.NW_012106698v1 359192 4 - 1517660 -ttac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459212 4 + 6513552 -TTAt i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11214043 4 - 20685099 GTAA- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e macNem1.NW_012016688v1 13578296 330 - 18804593 I a score=922534.000000 s hg38.chr18_GL383571v1_alt 96561 183 + 198278 ttatttcttCTTCTAATAAtttttttaagaaagagtcttgctctgtcgcccaggctggagtgcagtggcacaa-cttggctcactgcaacctccgcctcccagattcaatgaattctcatgcctcagccccccgagtagctgggattacagatttgcaccatcatgccccggctaatttttgta s panTro5.chr18 65001156 181 + 78221452 TTATTTCTTCTTCTAATAAtttttttaagaaagagtctcgctctgtcgcccaggctggagtgcagtggcacaa-ctccactcactgcaacctccgcctcccaggttcaacgaattgtc--gcctcagcctcccgagtagctgggattacagatttgcaccatcatgccccagctaatttttgta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125414 181 + 77229886 TTATTTCTTCTTCTAATAAtttttttaagaaagagtctcgctctgtcgcccaggctggagtgcagtggcacaa-ctccattcactgcaacctccgcctcccaggttcaacgaattgtc--gcctcagcctcccgagtagctgggattacagatttgcaccatcatgccccagctaatttttgta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345247 183 + 17472758 TTATTTCTTCTTCTAATAAtttttttaagaaagagtctcgctctgtcgcccaggctggagtgcagtggcacaa-cttggctcactgcaacctccgcctcccagattcaatgaattctcatgcctcagccccccgagtagctgggattacagatttgcaccatcatgccccggctaatttttgta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139384062 183 - 152096393 ttatttcttcttcttataatttttttaagaaagagtctcactctgtcgcccaggctggagtgcagtggcacaa-cttggctcactgcaacctccgcctcccaggttcaacgaattctcatgcctcagcccgccgagtagctgggattacagatttgcaccatcacgccctggctaatttttgta i nomLeu3.chr4 C 0 I 1127 s rheMac8.chr18 57334590 184 + 70235451 TTATTTATTCTTCTTATAAtttttttgagaaagaatcttgctctgtcgcccaggatggaatgcagtggcacaatctcagctcactgcaacctccgcctcccggtttcaacgaattcatgtgcctcagcccccagagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63025960 184 - 75711847 ttatttattcttcttataatttttttgagaaagaatcttgctctgtcgcccaggatggagtgcagtggcacaatctcggctcactgcaacctccgcctcccggtttcaacgaattcatgtgcctcagcccccagagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578626 184 - 18804593 ttatttattcttcttataatttttttgagaaagaatcttgctctgtcgcccaggatggagtgcagtggcacaatctcggctcactgcaacctccgcctcccggtttcaaggaattcatgtgcctcagcccccagagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i macNem1.NW_012016688v1 I 330 C 0 s cerAty1.NW_012001075v1 13195448 184 + 18905526 TTATTTATTCTTCTTATAAtttttttgagaaagaatcttgctctgtcgcccaggatggagtgcagtggcacaatctcggctcactgcaacctccgcctcccaggttcaacgaattcgcgtgcctcggcccccagagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60025452 184 - 72318688 ttatttattCTTCTTATAAtttttttgagacagagtcttgctctgtcgcccaggatggagtgcagtggcacaatctcggctcactgcaacctccgcctcccgggttcaaggaattcgcgtgcctcagcccccagagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359196 184 - 1517660 ttatttattcttcttatattttgtttgagaaagagttttgctctgtcgcctaggatggagtgcagtggcacaatctcggctcactgcaacctccgcctcccgggttcaacgaatttacgtgcctcagcccccagagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459216 183 + 6513552 ttatttattcttcttttaatttttttgagaaagagtcttgctctgtcgcccaggatggagtgcagtggcacaatctcggctcactgcaacctccgcct-ccgggttcaacgaattcgcgtgcctcagccccccgagtagctgggattacagatgtgcaccaccacgccctggataatttttgta i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11214047 43 - 20685099 -------------TAGCATTTTCTTTCAGGAATTCTTTTACTATTT--------------TTCAGCTGTA------------------------------------------------------------------------------------------------------------------ i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=40362.000000 s hg38.chr18_GL383571v1_alt 96744 6 + 198278 tttttc s panTro5.chr18 65001337 6 + 78221452 tttttc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125595 6 + 77229886 tttttc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345430 6 + 17472758 tttttc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385372 6 - 152096393 tttttc i nomLeu3.chr4 I 1127 C 0 s rheMac8.chr18 57334774 6 + 70235451 tttttc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026144 6 - 75711847 tttttc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578810 6 - 18804593 tttttc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13195632 6 + 18905526 tttttc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60025636 6 - 72318688 tttttc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359380 6 - 1517660 tttttc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459399 6 + 6513552 tttttc i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11214090 6 - 20685099 TTTCCC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=866237.000000 s hg38.chr18_GL383571v1_alt 96750 169 + 198278 gtagagacggggtttcactatgtctggtctccaatgcccgacctcaggtaatccactggcctcagcctcccaaactgctggaattacaggcatgagccaccgcgctctgccTATTTTTACTTAATAATAGACAATCTAAAAGCTTTTAACTTCAGAATTTTTCTTTTGC s panTro5.chr18 65001343 166 + 78221452 gtagagacggggttttactatgtctggtctccaacgcccgacctcaggtaatccactggcctcagcctcccaaagtgctggaattacaggcatgagccaccgcgctctgccCATTTTTACTTAATA---GACAATCTAAAAGCTTTTTACTTCAGAATTTTTCTTTTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125601 166 + 77229886 gtagagacggggttttactatgtctggtctccaacgcccgacctcaggtaatccactggcctcagcctcccgaagtgctggaattacaggcatgagccaccgcgctctgccCATTTTTACTTAATA---GACAATCTAAAAGCTTTTTACTTCAGAATTTTTCTTTTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345436 169 + 17472758 gtagagacggggtttcactatgtctggtctccaatgcccgacctcaggtaatccactggcctcagcctcccaaagtgctggaattacaggcatgagccaccgcgctctgccCATTTTTACTTAATAATAGACAATCTAAAAGCTTTTAACTTCAGAATTTTTCTTTTGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385378 169 - 152096393 gtagaggcggggtttcactatgtctggtcgcgaacgcccgacctcaggtaatccactggcctcagcctcccaaagtgctggaattacaggcatgagccaccacgctctgccCATTTTTACTTAATAATAGACAGTCTAAAAGCTTTTTACTTCAGAATTTTTCTTTTGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334780 169 + 70235451 gtagagacagggtttccctatgtctggtctcgaactcctaacctcaggtgatccgctgaccttggcctctcaaagtgctggaattataagcatgagccgctgcgtttggccCATTTTTACTTAATATTAGAGAATCTAAAAGCTTTTTCCTTTGGAATTTTTCTTTTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026150 169 - 75711847 gtagagacagggtttccctatgtctggtctcgaactcctaacctcaggtgatccgctgaccttggcctctcaaagtgctggaattataggcatgagccgctgcgtttggcccatttttacttaatattaGAGAATCTAAAAGCTTTTTCCTTCAGAATTTTTCTTCTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578816 169 - 18804593 gtagagacagggtttccctatgtctggtctcgaactcctaacctcaggtgatccgctgaccttggcctctcaaagtgctggaattataggcatgaggcgctgcctttggcccatttttacttaatattaGAGAATCTAAAAGCTTTTTCCTTCGGAATTTTTCTTTTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13195638 169 + 18905526 gtagagacagggtttccctatgtctggtctcgaactcctaacctcaggtgatccgctgaccttggcctctcaaagtgctggaattataggcatgagccgctgcgtttggccCATTTTTACTTAATATTAGAGAATCTAAAAGCTTTTTCCTTTGGAATTTTTCTTTTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60025642 169 - 72318688 gtagagacagggttttcctatgtctggtctcgaactcctaacctcaggtgatccgctgaccttggcctctcaaaatgctggaattataggcatgagccgctgcgtttggccCATTTTTACTTAATATTAGACAATCTAAAAACTTTTTCCTTTGGAATTTTTCTTTTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359386 169 - 1517660 gtagagacagggtttccctatgtctggtctcgaactcctaacctcaggtgatccgctgaccttggcctctcaaagtgctggaattataggcatgagccgctgcgtttggcccatttttacttaatattaGAGAATCTAAAAGCTTTTTCCTTCGGAATTTTTCTTTTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459405 163 + 6513552 gtagagatgaggtttccatat-----gtctcgaactcctaacctcaggtgatctgctgaccttggcctctcaaagtgctggaattataggcatgagccactgcatttggccCATTTTTACTTAATATTAAAGAATCTAAAAGC-TTTTCCTTCAGAATTTTTCTTTTGC i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214096 0 - 20685099 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=370921.000000 s hg38.chr18_GL383571v1_alt 96919 67 + 198278 TATTTTTCAAGTAAAACATATTTCACCATTTTCATATCTTCCACTTTTCTTTCTGGTTTTCTGTAAG s panTro5.chr18 65001509 67 + 78221452 TATTTTTCAAGTAAAACATGTTTCTCCATTTTCATATCTTCCACTTTTCTTTCTGGTTTTCTGTAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125767 67 + 77229886 TATTTTTCAAGTAAAACATGTTTCTGCATTTTCATATCTTCCACTTTTCTTTCTGGTTTTCTGTAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345605 67 + 17472758 TATTTTTCAAGTAAAACATATTTCTCCATTTTCATATCTTCCACTTTTCTTTCTGGTTTTCTGTAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385547 67 - 152096393 TATTTTTCAAGTAAAACATATTTCTCCATTTTCATATCTTGCAGTTTTCTTTCTGGTTTTCTGTAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57334949 67 + 70235451 TATTTTCCAAGTAAAACATATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026319 67 - 75711847 TATTTTCCAAGTAAAACATATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13578985 67 - 18804593 TATTTTCCAAGTAAAACGTATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13195807 67 + 18905526 TATTTTCCAAGTAAAACATATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60025811 67 - 72318688 TATTTTTCAAGTAAAACATATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359555 67 - 1517660 TATTTTCCAAGTAAAACATATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459568 67 + 6513552 TATTTTTCAAGTAAAACATATTTCTCCATTTTCATGTCTTCCACTTTTCTTTCTGGTTTGCTTTAAT i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11214096 43 - 20685099 TATTTTCC-------ACATATTCTACTTTTTT----------AGTTTTTTTTATTGCTTT------- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245042 120 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=572232.000000 s hg38.chr18_GL383571v1_alt 96986 78 + 198278 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTTATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA s panTro5.chr18 65001576 78 + 78221452 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTTATTTTGAATGATTGAAACATTACGTTTTTGTAAAGTAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64125834 78 + 77229886 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTTATTTTGAATGATTGAAACATTACATTTTTGTAAAGTAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345672 78 + 17472758 TAGTTGTACACACAGTCAATCACTTATTAGGTCAAATTTATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385614 78 - 152096393 CAGTTGTACACATAGTCAATCACTTATTAGGTCAAGTTTATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335016 78 + 70235451 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTGATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026386 78 - 75711847 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTGATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13579052 78 - 18804593 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTGATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13195874 78 + 18905526 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTGATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60025878 78 - 72318688 TAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTGATTTTGAATGATTGAAGCATTACTTTTTTGTAAAGCAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359622 78 - 1517660 TAGTTGTACACATGGTCAATCACTTATTAGGTCAAATTGATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459635 78 + 6513552 TAGTTGTACACATAGTCAATCACTTATTAGGTCCAATTGATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAA i colAng1.NW_012115433v1 C 0 C 0 s proCoq1.NW_012148742v1 1245162 78 - 1406956 TAGCTGTACACGTAGTCAATCACTGATTAGGTTAAATTAATTTTAAATAACTGAAACATTACTTTTTTGTAAAGCAAA i proCoq1.NW_012148742v1 I 120 I 6395 s otoGar3.GL873546 11214139 66 - 20685099 ------TACA------CAATCATTTATTAGGTTAAATTAAGTTTAAATAATAGAAAGACCACATTTCTGTAAAGCAAA i otoGar3.GL873546 C 0 C 0 e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=446702.000000 s hg38.chr18_GL383571v1_alt 97064 76 + 198278 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAAC--AATTTCTAatatatatatttatgtatgtatatatacc s panTro5.chr18 65001654 78 + 78221452 ATAGATACTTGACTGTTTTAGAATGAAAGTTGTTAAAACTTAATTTCTAatatatacatttatgtatgtatatatacc i panTro5.chr18 C 0 I 1 s panPan2.chr18 64125912 78 + 77229886 ATAGATACTTGACTGTTTTAGAATGAAAGTTGTTAAAACTTAATTTCTAatatatacatttatgtatgtatatatacc i panPan2.chr18 C 0 I 1 s gorGor5.CYUI01014964v1 5345750 76 + 17472758 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAAC--AATTTCTAatatatagatttatgtatgtacatatacc i gorGor5.CYUI01014964v1 C 0 I 1 s nomLeu3.chr4 139385692 78 - 152096393 ATAGATAATCGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatatatagatttatgtatgtatatatacc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335094 78 + 70235451 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatatatagatttatatatgtatatatacc i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63026464 78 - 75711847 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatatatagatttatatatgtatatatacc i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13579130 78 - 18804593 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatatatagatttatatatgtatatatacc i macNem1.NW_012016688v1 C 0 I 706 s cerAty1.NW_012001075v1 13195952 78 + 18905526 ATAGATAATTGACTGTTTTAGAATAAAAGTTGCTAAAACTTAATTTCTAatacatagatttatatatgtatatatacc i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60025956 78 - 72318688 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatatatagatttatatatgtatatatacc i chlSab2.chr18 C 0 I 1 s manLeu1.NW_012106698v1 359700 78 - 1517660 ATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatacatagatttatatatgtatatatacc i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3459713 78 + 6513552 ATATATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACTTAATTTCTAatatatagatttatatatgtatatatacc i colAng1.NW_012115433v1 C 0 I 1 s otoGar3.GL873546 11214205 49 - 20685099 GCATATATCTGACAGTTTTTGAATAAGACATATTAAAGTTTAATTTATA----------------------------- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I a score=298335.000000 s hg38.chr18_GL383571v1_alt 97140 84 + 198278 atatatatcacatatatattttaaaaata--tatatttacatatgtatgtatatatgtaattatataggtatttgtatatgtatta s panTro5.chr18 65001733 82 + 78221452 atatatattacatatatattttaaaaacacatatatttacatatgtat----atatgtaattatataggtatttgtatatgtatta i panTro5.chr18 I 1 C 0 s panPan2.chr18 64125991 80 + 77229886 atatata--acatatatattttaaaaacacatatatttacatatgtat----atatgtaattatataggtatttgtatatgtatta i panPan2.chr18 I 1 C 0 s gorGor5.CYUI01014964v1 5345827 84 + 17472758 atatatatcacatatatattttaaaaata--tatatttacatatgtatgtatatatgtaattatataggtatttgtatatgtatta i gorGor5.CYUI01014964v1 I 1 C 0 s nomLeu3.chr4 139385770 85 - 152096393 -tatatattacatatatattttaaaaatacatatatttacatatgtatgtatatatgtaattatataggtatttgtatatgtacta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335173 83 + 70235451 atatatattac--atatattttaaaaataggtatatttatatatgtatgtatatatgtaattatata-gtatttatatatgtatta i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63026543 83 - 75711847 atatatattac--atatattttaaaaataggtatatttatatatgtatgtatatatgtaattatata-gtatttatatatgtatta i macFas5.chr18 I 1 C 0 s cerAty1.NW_012001075v1 13196031 83 + 18905526 atatatattac--atatattttaaaaataggtatatttatatatgtatgtatatatgtaattatata-gtatttatatatgtgtta i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60026035 83 - 72318688 atatataacac--atatattttaaaaatagatacatttatatatgtatgtatatatgtaattatata-gtatttatatatgtatta i chlSab2.chr18 I 1 C 0 s manLeu1.NW_012106698v1 359779 83 - 1517660 atatatattac--atatattttaaaaataggtatatttatatatgtatgtatatatgtaattatata-gtatttatatatgtatta i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3459792 80 + 6513552 atatatattac--atatatttt-aaaatagatatatttatatatgtatgtatatatgtaattatata-gtatttatata--tatta i colAng1.NW_012115433v1 I 1 C 0 s otoGar3.GL873546 11214254 13 - 20685099 --------------------------------------ATACATGTATGTA----------------------------------- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e dasNov3.JH575754 464058 896 - 2150887 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=24024.000000 s hg38.chr18_GL383571v1_alt 97224 4 + 198278 tata s panTro5.chr18 65001815 4 + 78221452 tata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126071 4 + 77229886 tata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345911 4 + 17472758 tata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385855 4 - 152096393 tata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335256 4 + 70235451 tata i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026626 4 - 75711847 tata i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196114 4 + 18905526 tata i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026118 4 - 72318688 tata i chlSab2.chr18 C 0 I 31 s manLeu1.NW_012106698v1 359862 4 - 1517660 tata i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459872 4 + 6513552 tata i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 464954 4 - 2150887 TATA i dasNov3.JH575754 I 896 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214267 0 - 20685099 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=47768.000000 s hg38.chr18_GL383571v1_alt 97228 23 + 198278 tgtatgataCACACACACACGTG s panTro5.chr18 65001819 23 + 78221452 tgtataatacataCACACACGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126075 23 + 77229886 tgtataatacataCACACACGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345915 23 + 17472758 tgtatgataCACACACACATGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385859 21 - 152096393 --taataCACACACACACGTGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335260 21 + 70235451 -atataA-ACACACACAGAtgtg i rheMac8.chr18 C 0 I 10 s macFas5.chr18 63026630 21 - 75711847 -atataA-ACACACACAGAtgtg i macFas5.chr18 C 0 I 10 s cerAty1.NW_012001075v1 13196118 21 + 18905526 -atataA-ACACACACAGAtgtg i cerAty1.NW_012001075v1 C 0 I 10 s manLeu1.NW_012106698v1 359866 21 - 1517660 -atataA-ACACACACAGAtgtg i manLeu1.NW_012106698v1 C 0 I 10 s colAng1.NW_012115433v1 3459876 19 + 6513552 -ataCAA-ACACATACAGATG-- i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 464958 19 - 2150887 TATATTACATATATATACA---- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214267 0 - 20685099 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e chlSab2.chr18 60026122 31 - 72318688 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=257616.000000 s hg38.chr18_GL383571v1_alt 97251 45 + 198278 TGTGTGTGTTT--CCCCAAAGTTT-ATCATTCTGATTTCACATTTTCT s panTro5.chr18 65001842 47 + 78221452 TGTGTGTGTTTTTCCCCAAAGTTT-ATCATTCTGATTTCACATTTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126098 47 + 77229886 TGTGTGTGTTTTTCCCCAAAGTTT-ATCATTCTGATTTCACATTTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345938 45 + 17472758 TGCGTGTGTTT--CCCCAAAGTTT-ATCATTCTGATTTCACATTTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385880 47 - 152096393 TGTGTGTGTTTTTCCCCAAAGTTT-ATCATTCTGATTTCACATTTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335291 45 + 70235451 tgtgtgtgtTT--CCACAAAGTTT-ATCATTCTGATTTCACATTTTCT i rheMac8.chr18 I 10 C 0 s macFas5.chr18 63026661 45 - 75711847 tgtgtgtgtTT--CCACAAAGTTT-ATCATTCTGATTTCACATTTTCT i macFas5.chr18 I 10 C 0 s cerAty1.NW_012001075v1 13196149 45 + 18905526 tgtgtgtgtTT--CCACAAAGTTT-ATCATTCTGATTTCACATTTTCT i cerAty1.NW_012001075v1 I 10 C 0 s chlSab2.chr18 60026153 45 - 72318688 tgtgtgtgtTT--CCACAAAGTTT-ATCATTCTGATTTCACATTTTCT i chlSab2.chr18 I 31 C 0 s manLeu1.NW_012106698v1 359897 45 - 1517660 tgtgtgtgtTT--CCACAAAGTTT-ATCATTCTGATTTCACATTTTCT i manLeu1.NW_012106698v1 I 10 C 0 s colAng1.NW_012115433v1 3459895 45 + 6513552 TGTGTGTGTTT--CCACAAAGTTT-ATCATTCTGATTTCACATTTTCT i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11214267 36 - 20685099 ---------TT--CCCCAAAGTTT-ATCACTCTGATTTCACGTTTTCT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 464977 38 - 2150887 --------TTT--CCTTAAAGTTTAAATACTCCATTTTCACATTTTAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e calJac3.chr13 105228517 445 + 117903854 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e saiBol1.JH378121 19421595 437 - 31320352 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=5332.000000 s hg38.chr18_GL383571v1_alt 97296 3 + 198278 AAT- s panTro5.chr18 65001889 3 + 78221452 AAT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126145 3 + 77229886 AAT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345983 3 + 17472758 AAT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385927 3 - 152096393 AAT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335336 3 + 70235451 AAT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026706 3 - 75711847 AAT- i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196194 3 + 18905526 AAT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026198 3 - 72318688 AAT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359942 3 - 1517660 AAT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459940 3 + 6513552 AAT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228962 2 + 117903854 AA-- i calJac3.chr13 I 445 C 0 s saiBol1.JH378121 19422032 2 - 31320352 AA-- i saiBol1.JH378121 I 437 C 0 s otoGar3.GL873546 11214303 3 - 20685099 TAT- i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 465015 3 - 2150887 -ATC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e cebCap1.NW_016107689v1 1616977 470 + 2203405 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=157271.000000 s hg38.chr18_GL383571v1_alt 97299 20 + 198278 GAAATACAAGGTCAAAATGT s panTro5.chr18 65001892 20 + 78221452 GAAATACAAGGTCAAAATGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126148 20 + 77229886 GAAATACAAGGTCAAAATGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5345986 20 + 17472758 GAAATATAAGGTCAAAATGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385930 20 - 152096393 CACATATAAGGTCAAAATGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335339 20 + 70235451 GAAATACAAGGTCAAAATGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026709 20 - 75711847 GAAATACAAGGTCAAAATGA i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196197 20 + 18905526 GAAATACAAGGTCAAAATGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026201 20 - 72318688 GAAATACGAGGTCGAAATGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359945 20 - 1517660 GAAATACAAGGTCAAAATGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459943 20 + 6513552 GAAATACAAGATCAAAATGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228964 20 + 117903854 GAAATACAAGGTCAAAATCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422034 20 - 31320352 GAAATACAAGGTCAAAATCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1617447 20 + 2203405 GAAATACAAGGCCAAAATCA i cebCap1.NW_016107689v1 I 470 C 0 s otoGar3.GL873546 11214306 20 - 20685099 ATATCACAAGGTCAAAGTCA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 465018 20 - 2150887 AAAGTACAAAGTTGAAAATA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C e aotNan1.NW_018502140v1 3569148 460 - 14941987 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=372740.000000 s hg38.chr18_GL383571v1_alt 97319 48 + 198278 GTTTTCAAACTGTTTTTTT-AATCTCTTCATTACAT--AATTTCCTTTGAG s panTro5.chr18 65001912 46 + 78221452 GTTTTCAAACTGTTTTCT---ATCTCTTCATTACAT--AATTCCCTTTGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126168 46 + 77229886 GTTTTCAAACTGTTTTCT---ATCTCTTCATTACAT--AATTCCCTTTGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346006 47 + 17472758 GTTTTCAAACTGTTTTTTT--ATCTCTTCATTACAT--AATTTCCTTTGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139385950 38 - 152096393 GTTTTCAAACTGttttttt--tttttttt-----------ttttttttgag i nomLeu3.chr4 C 0 I 159 s rheMac8.chr18 57335359 46 + 70235451 GTTTTCAAACTGCTTTTT---ATCTCTTCATTACAT--AATTCCCTTTGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026729 46 - 75711847 GTTTTCAAACTGCTTTTT---ATCTCTTCATTACAT--AATTCCCtttgag i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196217 46 + 18905526 GTTTTCAAACTGCTTTTT---ATCTCTTCATTACAT--AATTCCCTTTGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026221 46 - 72318688 GTTTTCAAACTGCTTTTT---ATCTCTTCATTACAT--AATTCCCtttgat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 359965 46 - 1517660 GTTTTCAAACTGCTTTTT---ATCTCTTCATTACAT--AATTTCCtttgag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3459963 46 + 6513552 GTTTTCAAACTGCTTTTT---ATCTCTTCATTACAT--AATTCCCTTTGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105228984 45 + 117903854 GTTTTCAAAC--ATTTCTA--ATCTCTTCATCACAT--ATTTCCCTTTGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422054 46 - 31320352 GTTTTCAAATTGTTTTCTA--AT-TCTTCATTACAT--AATTCCCTTTGAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1617467 46 + 2203405 GTTTTCAAACTGTTTTCTA--AT-TCTTCATTACAT--AATTCCCTTTGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3569608 49 - 14941987 GTTTTCAAACTGTTTTCTA--ATCTCTTCATTACATTaattaccctttgag i aotNan1.NW_018502140v1 I 460 C 0 s otoGar3.GL873546 11214326 48 - 20685099 ACTTCCAAACCACCTTTTTTAACTTCTTC-TTTTAT--AACTCAATTTGAG i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 465038 47 - 2150887 ATTTCCAAACTATTTTTGC--ATGTCTTCATTACAT--AATTCCCTTTGAG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=104698.000000 s hg38.chr18_GL383571v1_alt 97367 15 + 198278 --TT--ATAA---TTTTTAACT s panTro5.chr18 65001958 15 + 78221452 --TT--ATAA---TTTTTAACT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126214 15 + 77229886 --TT--ATAA---TTTTTAACT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346053 15 + 17472758 --TT--ATAA---TTTTTAACT i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57335405 15 + 70235451 --TT--ATAA---TTTTTAACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026775 15 - 75711847 --tt--ataa---tttttaact i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196263 15 + 18905526 --TT--ATAA---TTTTTAACT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026267 15 - 72318688 --tt--ataa---tttttaatt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360011 15 - 1517660 --tt--ataa---tttttaact i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460009 15 + 6513552 --TT--ATAA---TTTTTAACT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229029 14 + 117903854 --TT--ATAA----TTTTAACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422100 14 - 31320352 --TT--ATAA----TTTTAACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1617513 14 + 2203405 --TT--ATAA----TTTTAACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3569657 14 - 14941987 --tt--ataa----ttttaact i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214374 18 - 20685099 --GT--ATAAATGATCTCCACT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 465085 19 - 2150887 ATTTAAATAG---TCTTCAATT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C e macNem1.NW_012016688v1 13579208 706 - 18804593 I e nomLeu3.chr4 139385988 159 - 152096393 I a score=1807681.000000 s hg38.chr18_GL383571v1_alt 97382 203 + 198278 TTC-----TATTTCAGTTCTTAACTCTTCAGATTTATTATTTAATCCTCTC--ATA-T-TACTTGATGTA-TTTTAGAAAAACACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTT----CTTTTATCGAATGATC----TATAGTTAATTGAGAACATCATGGAAAGTAGTACTCTGTTAAAAAAAACAAAATTTTTT------AATGTTGGCTAA s panTro5.chr18 65001973 208 + 78221452 TTC-----TATTTCAGTTCTTAACTCTTCGGATTTATTATTTAATCCTCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCACGACAGGCATGTATGTAATTTACTTGATTTGCTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACATCATGGAAAGTAGTGCTCTGTTAAAAAAA-CAAAATTTTTT------AATGTTGGCTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126229 207 + 77229886 TTC-----TATTTCAGTTCTTAACTCTTCGGATTTATTATTTAATCCTCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTGCTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACATCATGGAAAGTAGTGCTCTGTTAAAAAA--CAAAATTTTTT------AATGTTGGCTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346068 209 + 17472758 TTC-----TATTTCAGTTCTTAACTCTTCAGATTTATTATTTAATCCTCTCTTATA-T-TACTTGATGTA-TTTTAGAAAAACACATAATTTATCAGGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACATCATGGAAAGTAGTACTCTGTTAAAAAAAACAAAATTTTTT------AATGTTGGCTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386147 208 - 152096393 TTC-----TATTTCAGTTCTTAACTCTTCAGATTTATTATTTAATCCTCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGCGTGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TACAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAAAAA-CAAAATTTTTT------AATGTTGGCTAA i nomLeu3.chr4 I 159 C 0 s rheMac8.chr18 57335420 202 + 70235451 TTC-----C------ATTCTTAACTCTTCAGATTTATTATTTAATCCCCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAAAAA-CAAAATGTTTT------AATATTGGCTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026790 202 - 75711847 ttc-----c------attcttaactcttcagatttattatttaatCCCCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAAAAA-CAAAATGTTTT------AATATTGGCTAA i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196278 198 + 18905526 TTC-----C------GTTCTTAACTCTTCAGATTTATTATTTAATCCCCTCTTGTA-T-TACTTG----A-TTTTAGAAAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAAAAA-CAAAATTTTTT------AATATTGGCTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026282 208 - 72318688 ttc-----tatttcagttcttaactcttcagatttattatttaaACCCCTCTTGTA-T-TACTTGATGTA-TTTTAGATAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAAAAA-CAAAATTTTTA------AATACTGGCTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360026 202 - 1517660 ttc-----c------gttcttaaatcttcagatttattatttaatCCCCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAAAAA-CAAAATTTTTT------AATATTGGCTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460024 208 + 6513552 TTC-----TATTTCAGTTCTTAACTCTTCAGATTTATTATTTAATCCCCTCTTGTA-T-TACTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTACTTCTTTTATTGAATGATC----TATAGTTAATTGAGAACAGCATGGAAAGTAGTACTCCATTAAAGAAA-CAAAATTTTTT------AATATTGGCTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229043 209 + 117903854 TTC-----TATTTCAGTTCTCAATCCTTCAGATTTATTATTTAATCCTCTC--ATA-T-TATTTGATGTA-TTTTAGAAAAATACATAATTTATCAGGACAGGAGTGTATGTAGTTTACTTGATTTAAATCTTTTATTGAATAATCTATATATAGTTACTTGAGAGCAGCATGGAAAACCATGCTCAATTT-AAAAA-CCTAACTTTTT------TATGTTAGCTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422114 213 - 31320352 TTC-----TATTTCAGTTCTCAATCCTTCAGATTTATTATTTAATCCTCTCTTGTA-T-TATTTGATGTATTTTTAGAAAAATACACAATTTATCAAGACAGGAGTGTATGTAGTTTACTTGATTTACATCTTTTGTTGAATAATCTATATATAGTTAATTGAGAACAGCATGGAAAATCATGCTCAATTTAAAAAA-CCTAACTTTTT------CATGTTAGCTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1617527 211 + 2203405 TTC-----TATTTCAGTTCTCAAACCTTCAGATTTATTATTTAATCATCTCTTGTA-T-TATTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGAGTGTATGTAGTTTATTTGATTTACATCTTTTATTGAATAATCTATATATAGTTAATTGAGAACAGCATGGAAAACCATGCTCAATTA-AAAAA-CCTAACTTTTT------TATGTTAGCTAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3569671 211 - 14941987 ttc-----tatttcaattctcaatccttcagatttATTATTTAATCCTCTCTTGTA-T-TATTTGATGTA-TTTTAGAAAAATACATAATTTATCAAGACAGGAGTGTATGTAGTTTACTTGATTTACGTCTTTTACTGAATAATCTATATATAGTTAATTGAGAACAGCATGGAAAACCATGATCAATTT-AAAAA-CCTAACTTTTT------TATGTTAGCTAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214392 191 - 20685099 TTCAT---TATTTGAATTCTGACATTTTCAGAC---TTATTTAATTCTCTTTGGTATT-TGCTTAATGTA-TTATTGAAAA------GATTTATCCAGATAGGATTTTATGTAATTT-------------CTTTTATTGAATAATC----CGTG--TAATTGAGCAGGGTATGGCAAGTTGT-TTTAATTAAAAGAT-CCGTTTATTTT-TCCAAAATGCTGGCTAA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 465104 198 - 2150887 ----TCATTATTTCAATTCTCAGTTCTTCAGATTTATTATTTAATCCTCTCTGGTA-TATACTTAATGTG-CTATAGA----TATAAAATTTATCAGGGTAGAATTTGATGTAATTTGTTTGATTCACATCTTATATTGAATGTTC----CAGAGTTAACTAAGCAAAGCATGGAAGG--------------AAATG-CCAAACTTTTTCTCAAAAATGTTTGCTAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=161206.000000 s hg38.chr18_GL383571v1_alt 97585 17 + 198278 AACTAAAAACTTGCTTT s panTro5.chr18 65002181 17 + 78221452 AACCAAAAACTTGCTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126436 17 + 77229886 AACCAAAAACTTGCTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346277 17 + 17472758 AACTAAAAACTTGCTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386355 17 - 152096393 AACTAAAAACTTGCTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335622 17 + 70235451 AACTAAAAACTTGCTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63026992 17 - 75711847 AACTAAAAACTTGCTTT i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196476 17 + 18905526 AACTAAAAACTTGCTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026490 17 - 72318688 AACTAAAAACTTGCTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360228 17 - 1517660 AACTAAAAACTTGTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460232 17 + 6513552 AACTAAAAACTTGCTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229252 17 + 117903854 AACTAAAAACTTGCTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422327 17 - 31320352 AACTAAAAACTGGCTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1617738 17 + 2203405 AACTAAAAACTTGCTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3569882 17 - 14941987 AACTAAAAATTTGCTTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214583 16 - 20685099 CAC-AAAAACTGTCTTC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465302 0 - 2150887 C e canFam3.chr1 112286304 0 - 122678785 C e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=1906065.000000 s hg38.chr18_GL383571v1_alt 97602 231 + 198278 TAgctgggcaaagtggctcgtgtctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagaccagcctggggagaca---ccccccg-----------accacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactacaatgagaggatcatttgggcccaggagctgtgaaggccactgcactctgcagagt s panTro5.chr18 65002198 230 + 78221452 TAgctgggcaaagtggctcgtgcctgcaatcccagctacttgaggggctgagccaggaggattgcttgaggccaggaatttgagaccagcctggggagaca---ccccc-g-----------actacttctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcaactacaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcagagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126453 230 + 77229886 TAgctgggcaaagtggctcgtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagaccatcctggggagaca---ccccc-g-----------actacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactacaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcagagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346294 231 + 17472758 TAgctgggcaaagtggctcgtgtccgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagaccagcctggggagaca---ccccctg-----------accacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactacaatgagaggatcatttgggcccaggagctgtgaaggccactgcactctgcagagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386372 231 - 152096393 TAgctgggcaaagtggctggtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagactagcctggggagaca---ccccc-g-----------accacgactctaaaataagaaaacattaactgggtagagtggtttgtgcctgttgtgccagttgactgcaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcagagc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335639 227 + 70235451 TAgctgggcaaagtggctggtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagatcatcctggggagaca---ccccc-a-----------accacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactgcaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcag--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027009 227 - 75711847 TAgctgggcaaagtggctggtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagatcatcctggggagaca---ccccc-a-----------accacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactgcaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcag--- i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196493 227 + 18905526 TAgctgggcaaagtggctggtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagatcatcctggggagaca---ccccc-a-----------accatgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactgcaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcag--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026507 227 - 72318688 TAgctgggcaaagtggctggtgcctgcaatcccagttacttgagaggctgagccaggaggattgcttgaggccaggaatttgagatcagcctggggagacg---cctcc-a-----------accacgtctctaaaataagaaaa-attaaccgggtacggtggtttgtgcctgttgtgtcagtcgactgcaatgagaggatcatgtgggcccaggagctgtgaaggccactgcactccgcag--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360245 227 - 1517660 TAgctgggcaaagtggctggtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagatcatcctggggagaca---ccccc-a-----------accacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactgcaatgagaggatcatttgggcccaggagctgtgaaggccactgcactccgcag--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460249 227 + 6513552 TAgctgggcaaagtggctggtgcctgcaatcccagctacttgagaggctgagccaggaggattgcttgaggccaggaatttgagatcagcctggggagaca---ccccc-a-----------agcacgtctctaaaataagaaaa-attaactgggtacggtggtttgtgcctgttgtgccagtcgactgcaatgagaggatcatgtgggcccaggagctgtgaaggccactgcactccgcag--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229269 243 + 117903854 TAgctgggcaacgtggctcatgcctgtaatcccaactacttgagaggctgagccaggaggactgcttgaggcaaggaatttgagaccagcctgaggagacactgcctcc-cccattacacacaccacatctataaaataagaaaa-attagctgggtatggcagtttgtgcctgtagtgccagtagactgcaatgagaggatcatttgggcccaggaTCTGTGAC-TCCGCTGCACTCCACAGAGT i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19422344 238 - 31320352 TAgctgggcaaagtggctcatgcctgcaatcccaactacttgagaggctgagccaaaaggactgcttgaggcaaggaatttgaaaccagcctgtggagacactgccccc-c-----acacacaccacatctataaaataagaaaa-attagctgggtatggcggtttgttcccgtagtgccagtagattgcaatgagaggatcatttgggcccaggatctgtgac-tccactgcactccacagagt i saiBol1.JH378121 C 0 I 1 s cebCap1.NW_016107689v1 1617755 236 + 2203405 TAgctaggcaaagtggctcatgcctgcaatcccacctacttgagaggctgagccaggaggactgcttgaggcaaggaatttgaaaccagcctgaggagacattgccccc-c------ccca-aacacatctataaattaagaaaa-attagctgggaatggcagtttgtgcctgtagtgccggtagactgcaatgagaggatcatttgggcccaggatctgtgac-tccactgcactccaCAGAGT i cebCap1.NW_016107689v1 C 0 I 35 s aotNan1.NW_018502140v1 3569899 243 - 14941987 TAgctgggcaaagtggctcatgccttcaatcccaactacttgagaggctgagccagcaagactgcttgaggcaaggaatttgagaccatcctgaggagacacggcccct-ccccacacatacaccacgtctataaaataagaaaa-attagctgggtatggcagtttgtgcctgtagtgccagtacacttcaatgagaggatcatttgggcccaggatctgtgac-tccactgcactccacagagt i aotNan1.NW_018502140v1 C 0 I 1 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465302 0 - 2150887 C e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214599 0 - 20685099 C e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=37149.000000 s hg38.chr18_GL383571v1_alt 97833 9 + 198278 gttttgttt s panTro5.chr18 65002428 9 + 78221452 gttttgttt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126683 9 + 77229886 gttttgttt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346525 9 + 17472758 gttttgttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386603 9 - 152096393 gttttgttt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335866 5 + 70235451 ----tgttt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027236 5 - 75711847 ----tgttt i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196720 5 + 18905526 ----tgttt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026734 5 - 72318688 ----tgttt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360472 5 - 1517660 ----tgttt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460476 5 + 6513552 ----tgttt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229513 9 + 117903854 GTtgtgtgt i calJac3.chr13 I 1 I 17 s saiBol1.JH378121 19422583 9 - 31320352 gttttgtgc i saiBol1.JH378121 I 1 I 17 s aotNan1.NW_018502140v1 3570143 9 - 14941987 gttttgtgt i aotNan1.NW_018502140v1 I 1 I 41 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465302 0 - 2150887 C e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214599 0 - 20685099 C e cebCap1.NW_016107689v1 1617991 35 + 2203405 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=101804.000000 s hg38.chr18_GL383571v1_alt 97842 27 + 198278 -------------tgttttgttttgttttcagagatagag s panTro5.chr18 65002437 22 + 78221452 -------------tgttttgtttt-----cagagatagag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126692 22 + 77229886 -------------tgttttgtttt-----cagagatagag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346534 22 + 17472758 -------------tgttttgtttt-----cagagatagag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386612 22 - 152096393 -------------tgctttgtttt-----cagagacagag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335871 22 + 70235451 -------------tgttttgtttt-----cagagatagag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027241 22 - 75711847 -------------tgttttgtttt-----cagagatagag i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196725 22 + 18905526 -------------tgttttgtttt-----cagagatagag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026739 22 - 72318688 -------------tggtttgtttt-----cagagatagag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360477 22 - 1517660 -------------tgttttgtttt-----cagagatagag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460481 22 + 6513552 -------------tgttttgtttt-----cagagatagag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229539 33 + 117903854 tgtgtgtggtgtgtgtatgtgtTT-----CAGAAATAG-- i calJac3.chr13 I 17 C 0 s saiBol1.JH378121 19422609 28 - 31320352 tgt-----gtgtgtgtgtttgttt-----cagaaatcg-- i saiBol1.JH378121 I 17 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465302 0 - 2150887 C e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214599 0 - 20685099 C e aotNan1.NW_018502140v1 3570152 41 - 14941987 I e cebCap1.NW_016107689v1 1617991 35 + 2203405 I e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=199287.000000 s hg38.chr18_GL383571v1_alt 97869 34 + 198278 tgagaccttgtctctaaaaataaata-----aataaaTA s panTro5.chr18 65002459 34 + 78221452 tgagaccttgtctctaaaaataaata-----aataaaTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126714 34 + 77229886 tgagaccttgtctctaaaaataaata-----aataaaTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346556 34 + 17472758 tgagaccttgtctctaaaaataaaTA-----GATAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386634 34 - 152096393 tgagaccttgtctctaaaaataaata-----aataaaTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335893 26 + 70235451 tgagaccttgtctctaaaaataaata------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027263 26 - 75711847 tgagaccttgtctctaaaaataaata------------- i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196747 26 + 18905526 tgagaccttgtctctaaaaataaata------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026761 26 - 72318688 tgagattttgtctctaaaaataaata------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360499 26 - 1517660 tgagaccttgtctctaaaaataaata------------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460503 31 + 6513552 tgagaccgtgtctctaaaaataaataaaTAA-------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229572 26 + 117903854 AGAGGCCTTGTCTGTAAAAATAAATG------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422637 26 - 31320352 tgagaccttgtctgtaaaaataaata------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618026 26 + 2203405 TGAGACCTTGTCTGTAAAAATAAATA------------- i cebCap1.NW_016107689v1 I 35 C 0 s aotNan1.NW_018502140v1 3570193 26 - 14941987 tgagaccttgtctgtaaaaataaata------------- i aotNan1.NW_018502140v1 I 41 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465302 0 - 2150887 C e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214599 0 - 20685099 C e macNem1.NW_012016688v1 13579208 706 - 18804593 I a score=112004.000000 s hg38.chr18_GL383571v1_alt 97903 15 + 198278 AATAATTTAAAAATT s panTro5.chr18 65002493 11 + 78221452 A----TTTAAAAATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126748 11 + 77229886 A----TTTAAAAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346590 11 + 17472758 A----TTTAAAAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386668 15 - 152096393 AATAATTTAAAAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335919 15 + 70235451 aaTAATTTAAAAATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027289 15 - 75711847 aaTAATTTAAAAATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13579914 15 - 18804593 AATAATTTAAAAATT i macNem1.NW_012016688v1 I 706 C 0 s cerAty1.NW_012001075v1 13196773 15 + 18905526 aaTAATTTAAAAATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026787 15 - 72318688 aaTAATTTAAAAATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360525 15 - 1517660 aaTAATTTAAAAATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460534 10 + 6513552 -----TTTAAAAATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229598 15 + 117903854 CATAATTAAAAAGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422663 15 - 31320352 aaTAATTTAAAAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618052 15 + 2203405 AATAATTTAAAAATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3570219 15 - 14941987 aaTCATTTAAAAATT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465302 0 - 2150887 C e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214599 0 - 20685099 C a score=19058.000000 s hg38.chr18_GL383571v1_alt 97918 6 + 198278 AGCTTT s panTro5.chr18 65002504 6 + 78221452 AGCTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126759 6 + 77229886 AGCTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346601 6 + 17472758 AGCTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386683 6 - 152096393 AGCTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335934 6 + 70235451 AGCTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027304 6 - 75711847 AGCTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13579929 6 - 18804593 AGTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13196788 6 + 18905526 AGCTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026802 6 - 72318688 AGCGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360540 6 - 1517660 AGCTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460544 6 + 6513552 AGCTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229613 6 + 117903854 ATCTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422678 5 - 31320352 CTC-TT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618067 3 + 2203405 CTC--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3570234 5 - 14941987 CTC-TT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 465302 6 - 2150887 AACCTA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C e otoGar3.GL873546 11214599 0 - 20685099 C a score=259884.000000 s hg38.chr18_GL383571v1_alt 97924 26 + 198278 TGTCATGATA-TCAGCACCA--TC-TATAC s panTro5.chr18 65002510 26 + 78221452 TGTCATGATA-TCAGCACCA--TC-CATAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126765 26 + 77229886 TGTCATGATA-TCAGCACCA--TC-CATAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346607 26 + 17472758 TGTCATGATA-TCAGCACCA--TC-TATAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386689 26 - 152096393 TGTCATGCTA-TCAGCACCA--TC-TATAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335940 26 + 70235451 TGTCATGCTA-TCAGCACCA--TC-TATAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027310 26 - 75711847 TGTCATGCTA-TCAGCACCA--TC-TATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13579935 28 - 18804593 GTCCATGCTATTCAGCACCA--TCTTATAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13196794 26 + 18905526 TGTCATGCTA-TCAGCACCA--TC-TATAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026808 26 - 72318688 TGTCATGCTA-GCAGCACCA--TC-TATAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360546 26 - 1517660 TGTCATGCTA-TCAGCACCA--TC-TATAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460550 26 + 6513552 TGTCATGCTA-TCAGCACCA--TC-TATAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229619 26 + 117903854 TGTTATAATA-TCAACACCA--TC-TACAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422683 26 - 31320352 TGTCATGATA-TCAACAACA--TC-TCCAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618070 26 + 2203405 TGTCATGATA-TCAACACCA--TC-TACAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3570239 26 - 14941987 TGTCATGATA-TCAACACCA--TC-TACAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214599 27 - 20685099 TGTCATGATA-T-GGCGCCGATTC-TAGAC i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 465308 26 - 2150887 TGTCATCACA-TCAAAACCA--CC-TCCAC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286304 0 - 122678785 C a score=732726.000000 s hg38.chr18_GL383571v1_alt 97950 61 + 198278 AAAATCTAAT-ATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC s panTro5.chr18 65002536 61 + 78221452 AAAATCTAAT-ATGGTTTTCATAGGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126791 61 + 77229886 AAAATCTAAT-ATGGTTTTCATAGGAATATTTCCTATTGCAACATTTCTTTCAAGCACCAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346633 61 + 17472758 AAAATCTAAT-ATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386715 61 - 152096393 AAAATCTAAT-ATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57335966 61 + 70235451 AAAATCTAAT-ATGGTTTTCACATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027336 61 - 75711847 AAAATCTAAT-ATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13579963 59 - 18804593 AAAA-CTAAT-ATGGTTTTCATATTAATATTTCCTATTCAGACATTT-CTTCAAGCACCAAC i macNem1.NW_012016688v1 C 0 I 63 s cerAty1.NW_012001075v1 13196820 61 + 18905526 AAAATCTAAT-ACGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026834 61 - 72318688 AAAATCTAAA-AGGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360572 61 - 1517660 AAAATCTAAT-ATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460576 61 + 6513552 AAAATCTAAA-ATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229645 60 + 117903854 AAAATCTAAT-ATGGTTTTTATATAAATACTTCTTACTGCAACATTTCCTTCAAG-CACAAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422709 61 - 31320352 AAAATCTAAT-ATGGTTTTTATATAAATACTTCTTATTGCAACATTTCCTCCAAGAAACAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618096 61 + 2203405 AAAATCTAAT-ATGGTTTTTACATAAATACTTCTTATTGCAACATTTCCTCCAAGCACCAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3570265 61 - 14941987 AAAATCTAAT-ATGGATTTTATATAAATACTTCTTATTGCAACATTTCCTTCAAGCACAAAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214626 60 - 20685099 AAAGTCTAAT-ATGATTTTTATAGGAATATTT-TTATTAAAACATTTCCCTGAAGCATCAAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286304 61 - 122678785 GAAATGTCAT-AAGGTTTTCATATGAATATTTCATATTGAAACATTTATCTTCAATACTAAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465334 62 - 2150887 AAAATCtaataattatttttaaaataaCATGTCTTATTGAAACATTTCTCTTAAGCACAAAC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I a score=231138.000000 s hg38.chr18_GL383571v1_alt 98011 22 + 198278 AATAGAGATTC--ATCTTATTTTG s panTro5.chr18 65002597 22 + 78221452 AATAGAGTTTC--ATCTTATTTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126852 22 + 77229886 AATAGAGTTTC--ATCTTATTTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346694 22 + 17472758 AATAGAGATTC--ATCTTATTTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386776 20 - 152096393 AAC--AGTTTC--ATCTTATTTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336027 22 + 70235451 GATAGAGTTTC--ATCTTATTTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027397 22 - 75711847 GATAGAGTTTC--ATCTTATTTTG i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13196881 22 + 18905526 GATAGAGTTTC--ATCTTATTTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026895 22 - 72318688 AATAGAGTTTC--ATCTTATTTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360633 22 - 1517660 GATAGAGTTTC--ATCTTATTTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460637 22 + 6513552 AATAGAGTTTC--ATCTTATTTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229705 22 + 117903854 AATAGAGTTTC--ATCTTACTTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422770 22 - 31320352 AATAGAGTTTC--ATCTTACTTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618157 22 + 2203405 AATAGAGTTTC--ATCTTACTTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3570326 22 - 14941987 AATAGAGTTTC--ATCTTACTTTG i aotNan1.NW_018502140v1 C 0 I 5 s otoGar3.GL873546 11214686 22 - 20685099 AATACAGTTTT--GTGTTGTTTTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286365 24 - 122678785 AATACAGTTTCATATATTATTTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465396 24 - 2150887 AGTACAGGTTCATATATTAATTTG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e macNem1.NW_012016688v1 13580022 63 - 18804593 I a score=31643.000000 s hg38.chr18_GL383571v1_alt 98033 7 + 198278 GTAATTT s panTro5.chr18 65002619 7 + 78221452 GTAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126874 7 + 77229886 GTAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346716 7 + 17472758 GTAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386796 7 - 152096393 GTAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336049 7 + 70235451 GTAATAT i rheMac8.chr18 C 0 I 32 s macFas5.chr18 63027419 7 - 75711847 GTAATAT i macFas5.chr18 C 0 I 32 s cerAty1.NW_012001075v1 13196903 7 + 18905526 GTAATAT i cerAty1.NW_012001075v1 C 0 I 32 s chlSab2.chr18 60026917 4 - 72318688 GTAA--- i chlSab2.chr18 C 0 I 3 s manLeu1.NW_012106698v1 360655 7 - 1517660 GTAATAT i manLeu1.NW_012106698v1 C 0 I 32 s colAng1.NW_012115433v1 3460659 7 + 6513552 GTAACTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229727 7 + 117903854 GTAGTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422792 7 - 31320352 GTAGTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618179 7 + 2203405 GTAGTTG i cebCap1.NW_016107689v1 C 0 C 0 s otoGar3.GL873546 11214708 7 - 20685099 GTATGTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286389 7 - 122678785 GTTATTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465420 7 - 2150887 GTTGTTC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e aotNan1.NW_018502140v1 3570348 5 - 14941987 I e macNem1.NW_012016688v1 13580022 63 - 18804593 I a score=379168.000000 s hg38.chr18_GL383571v1_alt 98040 42 + 198278 TCTATTTTGATCACAAAAGTT-AATAAAAATGTGCACAATTTC s panTro5.chr18 65002626 42 + 78221452 TCTATTTTGATCACAAAAGTT-AATAAAAATGTGCACAATTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126881 42 + 77229886 TCTATTTTGATCACAAAAGTT-AATAAAAATGTGCACAATTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346723 42 + 17472758 TCTATTTTGATCACAAAAGTT-AATAAAAATGTGCGCAATTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386803 42 - 152096393 TCTTTTTTGATCACAAAAGTT-AATAAAAATGTGCACAATTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336088 42 + 70235451 TCTGTTTTGATCGCAAAAGTT-AATAAAAATGTGAACAATTTC i rheMac8.chr18 I 32 C 0 s macFas5.chr18 63027458 42 - 75711847 TCTGTTTTGATCGCAAAAGTT-AATAAAAATGTGAACAATTTC i macFas5.chr18 I 32 C 0 s macNem1.NW_012016688v1 13580085 39 - 18804593 TCTGTTTTGATCGCAAAAGTT-AATAAAAA---GAACAATTTC i macNem1.NW_012016688v1 I 63 C 0 s cerAty1.NW_012001075v1 13196942 42 + 18905526 TCTGTTTTGATCGCAAAAGTT-AAAAAAAATGTGAACAATTTC i cerAty1.NW_012001075v1 I 32 C 0 s chlSab2.chr18 60026924 42 - 72318688 TCTGTTTTGATCGCAAAAGTT-AATAAAAATGTGAACAATTTC i chlSab2.chr18 I 3 C 0 s manLeu1.NW_012106698v1 360694 42 - 1517660 TCTGTTTTGATCGTAAAAGTT-AATAAAAATGTGAACAATTTC i manLeu1.NW_012106698v1 I 32 C 0 s colAng1.NW_012115433v1 3460666 42 + 6513552 TCTGTTTTGATCGCAAAAGTT-AATAAAAATGTGAACAATTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229734 42 + 117903854 TCTATTTTGATCACAAGAGTT-AATAAAAATATGCACAATTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19422799 39 - 31320352 TCTATTTTGACCACAAGAGT----TAAAGATGTGCACAATTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618186 42 + 2203405 TGTATTTTGACCACAGGAGTT-AATAAAAATGTGCACAATTTC i cebCap1.NW_016107689v1 C 0 C 0 s otoGar3.GL873546 11214715 30 - 20685099 TATATTTTAGACACAGGAGTTAAATGAAAA------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286396 43 - 122678785 TCTATTTTGAGCACAGGTGTTAAATAAAAATAAACACAGTTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465427 43 - 2150887 TTCGTTCCAGCCACAATAGATAAATTACACTGTTTGCAGTTTC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e aotNan1.NW_018502140v1 3570348 5 - 14941987 I a score=366458.000000 s hg38.chr18_GL383571v1_alt 98082 30 + 198278 TGTCCTTTTATAAATTCAAAAGATTTATTT s panTro5.chr18 65002668 30 + 78221452 TGTCCTTTTATAAATTCAAAAGATTTATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126923 30 + 77229886 TGTCCTTTTATAAATTCAAAAGATTTATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346765 30 + 17472758 TGTCCTTTTATAAATTCAAAAGATTTATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386845 30 - 152096393 TGTCCTTTTATAAACTCAAAAGATTTATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336130 30 + 70235451 TGTCCTTTTATAAATTCAAAAGATTTATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027500 30 - 75711847 TGTCCTTTTATAAATTCAAAAGATTTATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580124 29 - 18804593 TGT-CTTTTATAAATTCAAAAGATTTATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13196984 30 + 18905526 TGTCCTTTTATAAATTCAAAAGATTTATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026966 30 - 72318688 TGTCCTTTTATAAATTCAAAAGATTTATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360736 30 - 1517660 TGTCCTTTTATAAATTCAAAAGATTTATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460708 30 + 6513552 TGTCCTTTTATAAATTCAAAAGATTTATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105229776 24 + 117903854 TGTCCTTTTAT------AAAAGATTTATTT i calJac3.chr13 C 0 I 568 s saiBol1.JH378121 19422838 30 - 31320352 TGTCCTTTTATAAATTCAAAAGATTTATTT i saiBol1.JH378121 C 0 I 568 s cebCap1.NW_016107689v1 1618228 30 + 2203405 TGTCCTTTTATAAATTCAAAAGACTTATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3570353 30 - 14941987 TGTCCTTTTATAAATTCAAAAGGTTTATTT i aotNan1.NW_018502140v1 I 5 C 0 s otoGar3.GL873546 11214745 21 - 20685099 --------TATAGATTCAGAAG-TTTATTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286439 30 - 122678785 TGTTCTTCCATAGATtcaaaaaatttatca i canFam3.chr1 C 0 I 12 s dasNov3.JH575754 465470 30 - 2150887 TGTTCTTGAACAGAGTAAAAAAATTTATCT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I a score=12637.000000 s hg38.chr18_GL383571v1_alt 98112 1 + 198278 C s panTro5.chr18 65002698 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126953 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346795 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386875 1 - 152096393 C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336160 1 + 70235451 C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027530 1 - 75711847 C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580153 1 - 18804593 C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197014 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026996 1 - 72318688 C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360766 1 - 1517660 C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460738 1 + 6513552 C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230368 1 + 117903854 C i calJac3.chr13 I 568 C 0 s saiBol1.JH378121 19423436 1 - 31320352 C i saiBol1.JH378121 I 568 C 0 s cebCap1.NW_016107689v1 1618258 1 + 2203405 C i cebCap1.NW_016107689v1 C 0 I 602 s aotNan1.NW_018502140v1 3570383 1 - 14941987 C i aotNan1.NW_018502140v1 C 0 I 594 s otoGar3.GL873546 11214766 1 - 20685099 C i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286481 1 - 122678785 t i canFam3.chr1 I 12 C 0 s dasNov3.JH575754 465500 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I a score=228126.000000 s hg38.chr18_GL383571v1_alt 98113 30 + 198278 TGTGACACATTAAAGAAATGTCAATGATAT s panTro5.chr18 65002699 30 + 78221452 TATGACACATTAAAGAAATGTTAATAATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126954 30 + 77229886 TATGACACATTAAAGAAATGTTAATAATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346796 30 + 17472758 TGTGACACATTAAAGAAATGTTAATGATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386876 30 - 152096393 TGTGACACATTAAAGAATTGTTAATAATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336161 30 + 70235451 CAAGACACCTTAAAGAAATGTTAATAATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027531 30 - 75711847 CAAGACACCTTAAAGAAATGTTAATAATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580154 27 - 18804593 CA--ACACCTTAAAGAAATGTT-ATAATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197015 30 + 18905526 CAAGACACCTTAAAGAAATGTTAATAATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60026997 30 - 72318688 CAAGATACCTTAGAGAAATGTTAATAATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360767 30 - 1517660 CAAGACACCTTAAAGAAATGTTAATAATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460739 30 + 6513552 CAAGATACCTTAAAGAAATGTTAATAATAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230369 27 + 117903854 CATGATACATTAAAAAAATGTTAATAA--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423437 27 - 31320352 CATGATACATTAAAGAAATGTTTATAA--- i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11214767 30 - 20685099 TGTGATACTTTAGAGAAATACTAATAACCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286482 30 - 122678785 tatGAAACTTTAAAGAAATGCTCATAATCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465501 30 - 2150887 TATGAAACTTGAAAGAAATGATAAAATTAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e aotNan1.NW_018502140v1 3570384 594 - 14941987 I e cebCap1.NW_016107689v1 1618259 602 + 2203405 I a score=71706.000000 s hg38.chr18_GL383571v1_alt 98143 6 + 198278 TAT-CCA s panTro5.chr18 65002729 6 + 78221452 TAT-CCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126984 6 + 77229886 TAT-CCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346826 6 + 17472758 TAT-CCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386906 6 - 152096393 TAT-CCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336191 6 + 70235451 TAT-CCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027561 6 - 75711847 TAT-CCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580181 7 - 18804593 TTTACCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197045 6 + 18905526 TAT-CCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027027 6 - 72318688 TAT-CCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360797 6 - 1517660 TAT-CCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460769 6 + 6513552 TAT-CCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230396 6 + 117903854 TAT-CCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423464 6 - 31320352 TAT-CCA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3570978 6 - 14941987 TAT-CCA i aotNan1.NW_018502140v1 I 594 C 0 s otoGar3.GL873546 11214797 6 - 20685099 TAT-CCA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286512 6 - 122678785 TAT-CCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465531 6 - 2150887 TAT-CCA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e cebCap1.NW_016107689v1 1618259 602 + 2203405 I a score=493089.000000 s hg38.chr18_GL383571v1_alt 98149 46 + 198278 AACTTTGTTGTCTTGTTTGTTCTTCATGTTAGTTTTTGA-TATTCTA s panTro5.chr18 65002735 46 + 78221452 AACTTTGTTGTCTTGTTTGTTCTTCATTTTAGTTTTTGA-TATTCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64126990 46 + 77229886 AACTTTGTTGTCTTGTTTGTTCTTCATTTTAGTTTTTGA-TATTCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346832 46 + 17472758 AACTTTGTTGTCTTGTTTGTTCTTCATTTTAGTTTTTGA-TATTCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386912 46 - 152096393 AACTTTGTTGTCTTGTTCGTTCTTCATTTTAGTTTTTGA-TATTCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336197 46 + 70235451 AACTTTGTTGTCTTGTTTGTTCTTCGTTTTAGTTTTTGA-TATTCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027567 46 - 75711847 AACtttgttgtcttgtttgttcttcgttttagtttttgA-TATTCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580188 45 - 18804593 AACTTTGTTGCTTGTTCTGTTCTTCGTAGT--TTTTTGATTATTCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197051 46 + 18905526 AACTTTGTTGTCTTGTTTGTTCTTCGTTTTAGTTTTTGA-TATTCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027033 46 - 72318688 AATTTTGTTGCCTTGTTTGTTCTTCATTTTAGTTTTTGA-TATTCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360803 46 - 1517660 AACtttgttgtcttgtttgttcttcgttttagtttttgA-TATTCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460775 46 + 6513552 AACTTTGTTGTCTTGTTTGTGCTTCATTTTAGTTTTTGA-TATTCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230402 45 + 117903854 AACTTTGTTGTCTT-TTTGTTCTTGGTTTTAGTTTTTGA-TATTCCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423470 45 - 31320352 AACTTTGTTGTCTT-TTTGTTCTTGGTTTTAGTTTTTTA-TATTCCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618861 45 + 2203405 AACTTTGTTGTCTT-TTTGTTCTTGGTTTTGGTTTTTGA-TATTCCA i cebCap1.NW_016107689v1 I 602 C 0 s aotNan1.NW_018502140v1 3570984 45 - 14941987 AACtttgttgtctt-tttgttcttggttttagtttttgA-TATTCCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214803 45 - 20685099 -AATTTGCTGCCTTTTTTGTTCTTGATCTAACTTTTTAA-TATTCTA i otoGar3.GL873546 C 0 I 69 s canFam3.chr1 112286518 45 - 122678785 AACTTTATTTAGTT-TCTTTATTTTGTTCTACTTTTTAA-TATCTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465537 44 - 2150887 AACACT-TTGTCTC-TTTATAATGGGTTTTAGttttaaa-tattata i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I a score=418924.000000 s hg38.chr18_GL383571v1_alt 98195 43 + 198278 CTAGAATTGTTGAATTTATGAGTATTATAAAAATCACAAC-AGT s panTro5.chr18 65002781 43 + 78221452 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127036 43 + 77229886 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346878 43 + 17472758 CTAGAATTGTTGAATTTATGAGTATTATAAAAATCACAAC-ATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139386958 43 - 152096393 CTAGAATTGTTGAATTTACGAGTATTATAAAAATTACAAC-AGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336243 43 + 70235451 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027613 43 - 75711847 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580233 43 - 18804593 CTAGATTGGTTGAATTTATGAG-ATTATAAAAATTACAACAAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197097 43 + 18905526 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027079 43 - 72318688 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360849 43 - 1517660 CTAGAATTGTTGAATTTATGAGTATTATAAAAATTACAAC-AGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460821 43 + 6513552 CTAGAATTGCTGAATTTATGAGTATTATAAAAATTACAAC-AGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230447 41 + 117903854 CTAGAATTGTTGAATTCGTGAG--TTATAAAAATTACAAC-AGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423515 41 - 31320352 CTAGAATTGTTGAATTCATGAG--TTATAAAAATTACAAC-AGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618906 41 + 2203405 CTAGAATTGTTGAGTTCATGAG--TTATAAAAATTACAAC-AGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571029 41 - 14941987 CTAGAATTGTTGAATTCATGAG--TTATAAAAATTACAAC-AGT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112286563 33 - 122678785 TTGGATATCTTGAATTTACATAT-TCATAAGAAT---------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465581 34 - 2150887 ttataattCTTGGAC---------TTAGAAAAATCACAAG-AAT i dasNov3.JH575754 C 0 I 34 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e otoGar3.GL873546 11214848 69 - 20685099 I a score=375337.000000 s hg38.chr18_GL383571v1_alt 98238 37 + 198278 TTATCAGAATAAAATGTTCTggctgagtatagtggct s panTro5.chr18 65002824 37 + 78221452 TTATCAGAATAAAATGTTCTggctgagtatagtggct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127079 37 + 77229886 TTATCAGAATAAAATGTTCTggctgagtatagtggct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346921 37 + 17472758 TTATCAGAATAAAATGTTCTggctgagtatagtggct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387001 37 - 152096393 TTATCAGAATAAAATGTTCTggctgagtatagtggct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336286 37 + 70235451 TTATCAGAATAAAAAGTTCTggctgagtatagtggct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027656 37 - 75711847 TTATCAGAATAAAAAGTTCTGGCTGAGTATAGTGGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580276 37 - 18804593 TTATCAGAATAAAAAGTTCTGGATGAGTATAGTGGCT i macNem1.NW_012016688v1 C 0 I 613 s cerAty1.NW_012001075v1 13197140 37 + 18905526 TTATCAGAATAAAAAGTTCTggctgagtatagtggct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027122 37 - 72318688 TTATCAGAATAAAAAGTTTTggctgagtatagtggct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360892 37 - 1517660 TTATCAGAATAAAAAGTTCTggctgagtatagtggct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460864 37 + 6513552 TTATCAGAATAAAACGTTCTggctgagtatagtggtt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230488 37 + 117903854 TTATGAGAATAAAATGTTCTggctgagtgtagtggct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423556 37 - 31320352 TTATCAGAATAAAATGTTCTggctgagtgtagtggct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618947 37 + 2203405 TTATCAGAATAAAATGTTCTggctgagtgtagtggtt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571070 37 - 14941987 TTATCAGAATAAAATGTTCTggctgagtgtagtggct i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112286596 11 - 122678785 ------GTATAAATTGT-------------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465615 34 - 2150887 I e otoGar3.GL873546 11214848 69 - 20685099 I a score=689505.000000 s hg38.chr18_GL383571v1_alt 98275 93 + 198278 cattcctatattccagtgctttggcaggcttgaggccaagagtttgagaccagactgaacaacacagtgagaccttgtctctac-aaaatattt s panTro5.chr18 65002861 93 + 78221452 cattcctatattccagtgctttggcaggcttgaggccaagagtttgagaccagactgaacaacacagtgagaccttgtctctac-aaaatattt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127116 93 + 77229886 cattcctatattccagtgctttggcaggcttgaggccaagagtttgagaccagactgaacaacacagtgagaccttgtctctac-aaaatattt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5346958 93 + 17472758 cattcctatattccagtgctttggcaggcttgaggccaagagtttgagaccagactgaacaacacagtgagaccttgtctctac-aaaatattt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387038 93 - 152096393 cattcctatattccagtgctttggcaggcttgaggccaagagtttgagaccagaccgagcaacacagtgagactttgtctctac-aaaatattt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336323 93 + 70235451 cattcccataatccagtgctctgccaggcttgaggccaagagtttgagaccagattgagcaacacagtgagaccttgtctctat-gaaatattt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027693 93 - 75711847 CATTCCCATAATCCAGTGCTCTGCCAGGcttgaggccaagagtttgagaccagattgagcaacacagtgagaccttgtctctat-gaaatattt i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13197177 93 + 18905526 cattcccgtaatccagtgctctgccaggcttgaggccaagagtttgagaccagattgagcaacacagtgagaccttgtctctat-gaaatattt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027159 93 - 72318688 cattcccgtaatccagtcctctgccaggcttgaggccaagagtttgagaccagactgagcaacacagtgagaccttgtctctat-gaaatattt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 360929 93 - 1517660 cattcccgtaatccagtgctctgccaggcttgaggccaagagtttgagaccagattgagcaacacagtgagaccttgtctctat-gaaatattt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3460901 93 + 6513552 cattcctgtaatccagtgctctgccaggcttgaggccaagagagtgagaccagactgagcaacacagtgagaccttgtctctat-gaaatattt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230525 86 + 117903854 cattcctctaatccattgctttggcaggcttgagacca--agtttgaaaccagactgagtaacatagtgagacttggtctccac-aaaa----- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423593 87 - 31320352 cattcctctaatccattgctttggcaggcttgaggcca--agtttgagaccagactgagtaacacagtgagacttggtctctacaaaaa----- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1618984 86 + 2203405 cattcctctaatcaattgctttggcaagcttgaggcca--agtttgagaccggactgagtaacacagtgagacctggtctctac-aaaa----- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571107 86 - 14941987 ccttcctctaatccattgctttagcaggcttcaggcca--agtttgagaccagactgagtaacacagtgagacttggtctctac-aaaa----- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112286607 40 - 122678785 ------------------------------------------ATTTACACAAGA-----------ATTGCCACATTGTATCAGA-AAAACATTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465615 34 - 2150887 I e otoGar3.GL873546 11214848 69 - 20685099 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I a score=390314.000000 s hg38.chr18_GL383571v1_alt 98368 50 + 198278 taaaaattagtggtgtggtggagcatacctatagtaccagctactcggga s panTro5.chr18 65002954 50 + 78221452 taaaaattagtggtgtggtggagcatacctatagtaccagctactcagga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127209 50 + 77229886 taaaaattagtggtgtggtggagcatacctatagtacctgctactcggga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347051 50 + 17472758 taaaaattagtggtgtggtggagcatagctatagtaccagctactcggga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387131 50 - 152096393 taaaaactagtggtgtggtggaggatacctatagtaccagctacttggga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336416 50 + 70235451 ttaaaattagtggtgtggtggagcatacctatagcaccagctacttggga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027786 50 - 75711847 ttaaaattagtggtgtggtggagcatacctatagcaccagctacttggga i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13197270 50 + 18905526 ttaaaattagtggtgtagtggagcatacctatagcaccagctacttggga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027252 50 - 72318688 taaaaattagtggtgtagtggagcatacctacagcaccagctacttgaga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 361022 50 - 1517660 ttaaaattagtggtgtggtggagcatacctatagcaccagctacttggga i manLeu1.NW_012106698v1 C 0 I 100 s colAng1.NW_012115433v1 3460994 50 + 6513552 taaaaattagtggtgtggtggagcatacctatagcaccagctacttggga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230611 47 + 117903854 ---acatgagtggtgtggcagtgcatgcctatagtaccagctacttggga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423680 47 - 31320352 ---aaatgagtggtgtggtggtgcatgcctacagtaccagctacttgaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619070 38 + 2203405 ------------gtgtggtgttgcatgcctatagtaccagttacttggga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571193 47 - 14941987 ---aaatgagtggtgtggtggtgcatgcctatagtaccagctacttggga i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465615 34 - 2150887 I e canFam3.chr1 112286647 0 - 122678785 C e otoGar3.GL873546 11214848 69 - 20685099 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I a score=753493.000000 s hg38.chr18_GL383571v1_alt 98418 102 + 198278 ggctgaggcgggaagatcacttgacccc-agaagttgaggactgaagtgagctccgatcacaccactgcactccagcctgagcaatagagctagaccctgtct s panTro5.chr18 65003004 103 + 78221452 ggctgaggcgggaagatcacttgacccccagaagttgaggactgaagtgagctccgatcactccactgcactccagcctgagcaatagagctagaccctgtct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127259 103 + 77229886 ggctgaggcgggaagatcacttgacccccagaagttgaggactgaagtgagctccgatcactccactgcactccagcctgagcaatagagctagaccctgtct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347101 102 + 17472758 ggctgaggcgggaagatcgcttgacccc-agaagttgaggactgaagtgagctctgatcacaccactgcactccagcctgagcaatagagctagaccctgtct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387181 101 - 152096393 ggctgaggcggaaagatcacttgacccc-agaagttgaggactaaagtgagctctgatcacaccactgcactccagcctga-caatagagctagaccttgtct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336466 102 + 70235451 ggctgaggcgggaagatcactcggcccc-agaagatgaggactgaagtgagctgtgatcacaccactgcactccagcctaagcaacagagctagaccctgtct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63027836 102 - 75711847 ggctgaggcgggaagatcactcggcccc-agaagatgaggactgaagtgagctgtgatcacaccactgcactccagcctaagcaacagagctagaccctgtct i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13197320 102 + 18905526 ggctgaggcgggaagatcactcggcccc-agaagatgaggactgaagtgagctgtgatcacaccactgcactccagcctgagcaacagagctagaccctgtct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027302 102 - 72318688 ggctgaggcgggaagatcactcggcccc-agaagatgaggactgaagtgagctgtgatcacaccactgcactccaacctgagcaatacagctagatcctgtct i chlSab2.chr18 C 0 I 158 s colAng1.NW_012115433v1 3461044 102 + 6513552 ggctgaggcgggaagatcactcggcccc-agaagatgaggactgaagtgagctgtgatcacactactgcactccagcctgagcaatagagctagaccctgtct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230658 102 + 117903854 ggctgaggcagaaagatcacttgaccca-agaagttgagaactgaagtgatctgtgatcacaccactgcactccagcctgggcaatagagctagaccctgtct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423727 102 - 31320352 ggctggggcaggaagatcacttgaccca-agaagttgagaattgaagtgatctgtgattgcaccactgcactccagtctgggcaatagagctagaccttgtct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619108 102 + 2203405 ggctgaggcaggaagatcacttgaccca-agaagttgagaactgaagtgatctgtggtcataccactgcactccagcctgggcaatagagctagaccttgtct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571240 101 - 14941987 ggctgaggcaggaagatcacttgaccca-agaagttgagaactgaagtgatc-atgatcgcaccactgcactccagcctgggcaatagagctagaccttgtct i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465615 34 - 2150887 I e canFam3.chr1 112286647 0 - 122678785 C e otoGar3.GL873546 11214848 69 - 20685099 I e manLeu1.NW_012106698v1 361072 100 - 1517660 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I a score=9100.000000 s hg38.chr18_GL383571v1_alt 98520 1 + 198278 c s panTro5.chr18 65003107 1 + 78221452 c i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127362 1 + 77229886 c i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347203 1 + 17472758 c i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387282 1 - 152096393 c i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336568 1 + 70235451 c i rheMac8.chr18 C 0 I 178 s macFas5.chr18 63027938 1 - 75711847 c i macFas5.chr18 C 0 I 161 s cerAty1.NW_012001075v1 13197422 1 + 18905526 c i cerAty1.NW_012001075v1 C 0 I 200 s colAng1.NW_012115433v1 3461146 1 + 6513552 c i colAng1.NW_012115433v1 C 0 I 6 s calJac3.chr13 105230760 1 + 117903854 c i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423829 1 - 31320352 c i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619210 1 + 2203405 c i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571341 1 - 14941987 c i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 465649 1 - 2150887 C i dasNov3.JH575754 I 34 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286647 0 - 122678785 C e otoGar3.GL873546 11214848 69 - 20685099 I e manLeu1.NW_012106698v1 361072 100 - 1517660 I e chlSab2.chr18 60027404 158 - 72318688 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I a score=34832.000000 s hg38.chr18_GL383571v1_alt 98521 18 + 198278 aaaaaaaa-gaaagaaaga- s panTro5.chr18 65003108 15 + 78221452 aaaaaaaa----agaaaga- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127363 19 + 77229886 aaaaaaaaagaaagaaaga- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347204 19 + 17472758 aaaaaaaaagaaagaaaga- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387283 14 - 152096393 aaaaaaaa-----gaaaGA- i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63028100 18 - 75711847 aagaaaaa-gaaaaaaaga- i macFas5.chr18 I 161 C 0 s colAng1.NW_012115433v1 3461153 18 + 6513552 aagaaaaa-gaaagaaaga- i colAng1.NW_012115433v1 I 6 I 52 s calJac3.chr13 105230761 5 + 117903854 --------------aaaga- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423830 13 - 31320352 -aaaaaaa-----gaaaga- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619211 13 + 2203405 -aaaaaaa-----gaaaga- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571342 13 - 14941987 -aaaaaaa-----gaaaga- i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 465650 15 - 2150887 AGGAAAAA-----TAAAGGA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e canFam3.chr1 112286647 0 - 122678785 C e otoGar3.GL873546 11214848 69 - 20685099 I e manLeu1.NW_012106698v1 361072 100 - 1517660 I e chlSab2.chr18 60027404 158 - 72318688 I e cerAty1.NW_012001075v1 13197423 200 + 18905526 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I e rheMac8.chr18 57336569 178 + 70235451 I a score=37780.000000 s hg38.chr18_GL383571v1_alt 98539 13 + 198278 gaggaaaaaTGTA s panTro5.chr18 65003123 13 + 78221452 gagaaaaaaTGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127382 13 + 77229886 gagaaaaaaTGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347223 13 + 17472758 gagaaaaaaTGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387297 13 - 152096393 GAGGAAAAATGTA i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63028118 9 - 75711847 ----aagaaagaa i macFas5.chr18 C 0 C 0 s calJac3.chr13 105230766 13 + 117903854 aagaaagaaTGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423843 13 - 31320352 aagaaagaaTGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619224 13 + 2203405 aagaaaGAATGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571355 13 - 14941987 aagaaaGAATGTA i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465665 0 - 2150887 C e canFam3.chr1 112286647 0 - 122678785 C e otoGar3.GL873546 11214848 69 - 20685099 I e colAng1.NW_012115433v1 3461171 52 + 6513552 I e manLeu1.NW_012106698v1 361072 100 - 1517660 I e chlSab2.chr18 60027404 158 - 72318688 I e cerAty1.NW_012001075v1 13197423 200 + 18905526 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I e rheMac8.chr18 57336569 178 + 70235451 I a score=10010.000000 s hg38.chr18_GL383571v1_alt 98552 2 + 198278 AA s panTro5.chr18 65003136 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127395 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347236 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387310 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63028127 2 - 75711847 aA i macFas5.chr18 C 0 I 1 s calJac3.chr13 105230779 2 + 117903854 AA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423856 2 - 31320352 AA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619237 2 + 2203405 AA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571368 2 - 14941987 AA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112286647 2 - 122678785 AA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e dasNov3.JH575754 465665 0 - 2150887 C e otoGar3.GL873546 11214848 69 - 20685099 I e colAng1.NW_012115433v1 3461171 52 + 6513552 I e manLeu1.NW_012106698v1 361072 100 - 1517660 I e chlSab2.chr18 60027404 158 - 72318688 I e cerAty1.NW_012001075v1 13197423 200 + 18905526 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I e rheMac8.chr18 57336569 178 + 70235451 I a score=98306.000000 s hg38.chr18_GL383571v1_alt 98554 21 + 198278 ATTCCAATAATTGAAAAGGGG s panTro5.chr18 65003138 21 + 78221452 ATTCCAATAATTTAAAAGTGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127397 21 + 77229886 ATTCCAATAATTTAAAAGTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347238 21 + 17472758 ATTCCAATAATTTAAAAGTGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387312 21 - 152096393 ATTCCAATAATTTAAAAGTGG i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63028130 21 - 75711847 ATTCTGACAATTTAAAAGTGT i macFas5.chr18 I 1 C 0 s colAng1.NW_012115433v1 3461223 21 + 6513552 ATTCTGACAATTTACAAGTGT i colAng1.NW_012115433v1 I 52 C 0 s calJac3.chr13 105230781 21 + 117903854 ATTCCAACAATTTAAAAGTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423858 21 - 31320352 ATTTCAACAATTTAAAAGTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619239 21 + 2203405 ATTCCAACAATTTAAAAGTGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571370 21 - 14941987 ATTCCAGTAATTTAGAAGTGG i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112286649 21 - 122678785 ATTTCGACAATTTGGAAGTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465665 4 - 2150887 -----------------GTGG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e otoGar3.GL873546 11214848 69 - 20685099 I e manLeu1.NW_012106698v1 361072 100 - 1517660 I e chlSab2.chr18 60027404 158 - 72318688 I e cerAty1.NW_012001075v1 13197423 200 + 18905526 I e macNem1.NW_012016688v1 13580313 613 - 18804593 I e rheMac8.chr18 57336569 178 + 70235451 I a score=433266.000000 s hg38.chr18_GL383571v1_alt 98575 39 + 198278 CAGCAATGACCTCTTTTGTGAATAGCAAA--CCCTGAGGAA s panTro5.chr18 65003159 39 + 78221452 CAGCAATGACCTCTTTTGTGAATAGCAAA--CCCTGAGGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127418 39 + 77229886 CAGCAATGACCTCTTTTGTGAATAGCAAA--CCCTGAGGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347259 39 + 17472758 CAGCAATGACCTCTTTTGTGAATAGCAAA--CCCTGAGGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387333 39 - 152096393 CAGCAACGACCTCTTTTGTGAATAGCAAA--CCCTGAGGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336747 40 + 70235451 CAGCAATGACCGTTTTTGTGACTAGCAAAT-CACTGAGGAA i rheMac8.chr18 I 178 C 0 s macFas5.chr18 63028151 39 - 75711847 CAGCAATGACCTCTTTTGTGAATAGCAAA--CACTGAGGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580926 39 - 18804593 CAGCAATGACCTCTTTTGTGAATAGCAAA--CACTGAGGAA i macNem1.NW_012016688v1 I 613 C 0 s cerAty1.NW_012001075v1 13197623 39 + 18905526 CAGCAATGACCTCTTTTGTGAATAGCAAA--CACTGAGGAA i cerAty1.NW_012001075v1 I 200 C 0 s chlSab2.chr18 60027562 39 - 72318688 CAGCAATGACCTCTTTTGTGAATAGCAAA--CACTGAGGAA i chlSab2.chr18 I 158 C 0 s manLeu1.NW_012106698v1 361172 39 - 1517660 CAGCAATGACCTCTTTTGTGAATAGCAAA--CACTGAGGAA i manLeu1.NW_012106698v1 I 100 C 0 s colAng1.NW_012115433v1 3461244 39 + 6513552 CAGCAATGACCTCTTTTGTGAATAGCAAA--CACTGAGGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230802 39 + 117903854 CAACAATGACCTCTTTTGTGAATAGCAAA--CCATGAGGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423879 39 - 31320352 CAGCAATAACCTCTTTTGTGAATAGCAAA--CCGTGAGGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619260 39 + 2203405 CAGCAATAACCTCTTTTGTGAATAGCAAA--CCATGAGGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571391 39 - 14941987 CAGCAATGACCTCTTTTGTGAATAGCAAA--CCATGAAGAA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112286670 41 - 122678785 GAACAGTGACCTGCCTTGTGAATAGAAAATACACTGACGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465669 39 - 2150887 CAGCAAATACCTTTGTTTGTAATACAATA--CCCTGATGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1245240 6395 - 1406956 I e otoGar3.GL873546 11214848 69 - 20685099 I a score=36871.000000 s hg38.chr18_GL383571v1_alt 98614 3 + 198278 TCT s panTro5.chr18 65003198 3 + 78221452 TTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127457 3 + 77229886 TCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347298 3 + 17472758 TCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387372 3 - 152096393 TCT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63028190 3 - 75711847 TCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580965 3 - 18804593 TCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197662 3 + 18905526 TCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027601 3 - 72318688 TCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 361211 3 - 1517660 TCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3461283 3 + 6513552 TCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230841 3 + 117903854 TCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423918 3 - 31320352 TCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619299 3 + 2203405 TCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571430 3 - 14941987 TCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1251635 3 - 1406956 TCT i proCoq1.NW_012148742v1 I 6395 C 0 s canFam3.chr1 112286711 3 - 122678785 TCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465708 3 - 2150887 TTT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11214848 69 - 20685099 I e rheMac8.chr18 57336787 0 + 70235451 C a score=395011.000000 s hg38.chr18_GL383571v1_alt 98617 36 + 198278 CCTTAAGCA-CAGT--TTTTCTACAGAATGAGAACCAAA s panTro5.chr18 65003201 36 + 78221452 CCTTAAGCA-CAGT--TTTTCTACAGAATGAGAACGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127460 36 + 77229886 CCTTAAGCA-CAGT--TTTTCTACAGAATGAGAACGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347301 36 + 17472758 CCTTAAGCA-CAGT--TTTTCTACAGAATGAGAACCAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387375 36 - 152096393 CCTTAAGCA-CAGT--TTTTCTACAGAATGAGAACCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336787 36 + 70235451 CCCTAAGCAGCAGT--TTTTCTAC-AAATGAGAATGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63028193 36 - 75711847 CCTTAAGCA-CAAT--TTTTCTACAAAATGAGAATGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13580968 36 - 18804593 CCTTAAGCA-CAGT--TTTTCTACAAAATGAGAATGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197665 36 + 18905526 CCTTAAGCA-CAGT--TTTTCTACAAAATGAGAATGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027604 36 - 72318688 CCTTAAACA-CAGT--TTTTCTACAAAATGAGAATGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 361214 36 - 1517660 CCTTAAGCA-CAGT--TTTTCTACAAAATGAGAATGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3461286 36 + 6513552 CCTGAAGCA-CAGT--TTCTCTACAAAATGAGAATGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230844 38 + 117903854 CCTTAAGCA-GAGTTGTTTCCTGCAGAGTGAGAATCAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423921 38 - 31320352 CCTTAAGCA-GAGTTGTTTCCTGCAGAGTGTGAACCAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619302 38 + 2203405 CCTTAAGCA-GAGTTATTTCCTGCAGAGTGAGAACCAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571433 38 - 14941987 CCTTAAGCA-GAGTTGTTTCCTGCAGAGTGAGAACCAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1251638 36 - 1406956 CCTTAAGCA-CAGT--ATTTCTATGGAATGAGCACCAAA i proCoq1.NW_012148742v1 C 0 I 64 s otoGar3.GL873546 11214917 36 - 20685099 CCTCGAGTA-CGGT--ATTTCCATAGACTGTGAAGGGAG i otoGar3.GL873546 I 69 C 0 s canFam3.chr1 112286714 34 - 122678785 CCTGAAGCA---GT--GCCCCTAAAGAATGAGCACCAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 465711 36 - 2150887 CCTAAAACA-CAAT--ATTTCTAAATAATGTGCACAAAA i dasNov3.JH575754 C 0 C 0 a score=1148609.000000 s hg38.chr18_GL383571v1_alt 98653 139 + 198278 GCAACACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGTG-TGGGTGTGGCAGAAGAACCTTTATCATGCTTACCGTGCCATCCTACATCTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAGGTTGTCATTT-------A s panTro5.chr18 65003237 139 + 78221452 GCAACACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGTG-TGGGTGTGGCAGAAGAACCTTTATCATGCTTACCGTGACATCCTACATCTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAGGTTGTCATTT-------A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127496 139 + 77229886 GCAACACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGTG-TGGGTGTGGCAGAAGAACCTTTATCATGCTTACCGTGACATCCTACATCTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAGGTTGTCATTT-------A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347337 134 + 17472758 GCAACACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGTG-TGCGTGTGGCAGAAGAACCTTTATCATGCTTACCGTGACATCCTACATCTGTTACAT-----TAAAGTGTTCATATGAGAACTTATGTTGTCATTT-------A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387411 134 - 152096393 GCAACACTGCCCAAAA--------------------TGAT-------------------------------ACAA---ACATTCCTGTGGTG-TGTGTGTGGTAGAAGAACCTTTATCATGCTTACCGTGACGTCCTACATCTGTTACATTAAACTAAAGTGTTCACATGAGAACTTATGTTGTCATTT-------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336823 139 + 70235451 ACAACACTGCCCAAAA---------------------GATAC---------------------AG------ACAA---ACATCCT--TGGCG-TACTTGTGACAGAAGAAACTTTATCATGCTTAC-GTGACATCCTACCTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTATGTT-TGTGTT--TGTTGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63028229 144 - 75711847 ACAACACTGCCCAAAA--------------------TGATAC---------------------AG------ATAA---ACATTCCTGTGGCG-TACTTGTGACAGAAGAAACTTTATCATGCTTACTGTGACATCCTACGTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAtgttgtttttt--tgttgt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13581004 144 - 18804593 ACAACACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGCG-TACTTGTGACAGAAGAAACTTTATCATGCTTACTGTGACATCCTACGTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAtgttgtttttt--tgttgt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197701 144 + 18905526 ACAACACTGCCCAAAA--------------------TGATCC---------------------AG------ACAA---ACATTCCTGTGGCG-TACTTGTGACAGAAGAAACTTTATCATGCTTACTGTGACATCCTACGTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTATGTTGTTTTTT--TGTTGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027640 142 - 72318688 ACAACACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGCG-TACTTGTGACAGAAGAACCTTTATCATGCTTACTGCGACATCCTACGTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTATGTTGTTTTTT----TTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 361250 144 - 1517660 ACAACACTGCCCAAAA--------------------TAATCC---------------------AG------ACAA---ACATTCCTGTGGCG-TACTTGTGACAGAAGAAACTTTATCATGCTTACTGTGACATCCTACGTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAtgttgtttttt--tgttgt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3461322 145 + 6513552 ACAGCACTGCCCAAAA--------------------TGATAC---------------------AG------ACAA---ACATTCCTGTGGTG-TA-TTGTGACAGAAGAACCTTTATCATGCTTACTGTGACATCCTACGTTTGTTACATTAAACTAAAGTGTTCATATGAGAACTTACTTtttttgttgttgttgt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105230882 139 + 117903854 ACCACAGGGCCCAAAA--------------------TGATAC---------------------AG------ACTA---ACATTCCTGTGGTGTTAAGTATGACAGAAGAACCTTTATCATGCTTGCTGTGACATCCTACATCTGTTTCATTAAACTAAAGTGTTCATAGGAGAATTTATGTTGTTAATT-------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19423959 139 - 31320352 ACAACACAGCCCGAAA--------------------TGATAC---------------------AG------ACTA---ACATTCATGCGGTGTTAAGTATGATAGAAGAACCTTTATCATGCTTACTGTGACATTCTACATCTGTTTCATTAAACTAAATTGTTCATAGGAGAATTTATGTTGTTAATT-------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619340 139 + 2203405 ACAACACGGCCCAAAA--------------------TGATAC---------------------AG------ACTA---ACATTCCCGTGGTGTTAAGTATGACACAAGAACCTTTATCATGCTTACTGTGACATCCTACATCTGTTTCATTAAACTAAAGTGTTCATAGGAGAATTTATGTTGTTAATT-------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571471 139 - 14941987 ACAACACGGCCCAAAA--------------------TGATAC---------------------AG------ACTA---ACATTCCTGTGGTGTTAAGTATGACAGAAGAAACTTTATCATGCTTACTGTGACATCCTACATCTGTTTCATTAAACTAAAGTGTTCATAGGAGAATTTATGTTGTTAATT-------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11214953 73 - 20685099 GCAGAGCTGCCCACAG--------------------TGA--------------------------------------------CCGGTGATG-TG--------AGGATTACTTCAGTGATG-TGGATGTGACTTGCATCCTTAGTTC-------------------------------------------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286748 155 - 122678785 GCAATACTTCTCATAGAGTGACCCCACAAACTCTTGTAATGC---------------------AGAACAGAACAC---ACACCC---TGATA-CAGATAAGACAG-AGGACCTTTATGG-GATCCCTGTGACACCC-ACATCTATTGCCACAAAAT-GTGTGTTCATTTAAGAGTTTATTTCATTCA---------- i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 465747 145 - 2150887 ACAATAGTGCCCACAG--------------------AGACACATCAAGCCCTGCTGTGATAGAAG------ACAAAACACCTTCCC-TGATG-TAGTCATGGCAGAAGGA---------------CTGCGGCATCCTGTATCTGTTACCTT-GACTAAAACGTTCATATGAGGACTTATACTGTTCATT-------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1251674 64 - 1406956 I a score=2759630.000000 s hg38.chr18_GL383571v1_alt 98792 242 + 198278 TTTTTGTTTACTATAGGTTAATACTATCATATTT--AAGCATAGGCACGGATTTATTTTGGCATTTTAACAGTCGAAAACACCATGTCAGTGGGTACTAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GTATAAAGCTCGGAGATGGCTTGACAACGGGCTTAGGATAGGGTTAC----AATGCCTCTTTTACTCATTGAAGTGGTAACCTAAA----------------AAGAA-AGAAAGGAATGTACATAGAGC s panTro5.chr18 65003376 242 + 78221452 TTTTTGTTTACTATAGGTTAATACTATCATATTT--AAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTCGAAAACACCATGTCAGTGGGTACTAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------CTATAAAGCTTGGAGATGGCTTGACAACGGGCTTAGGATAGGGTTAC----AATGCCTCTTTTACTCATTGAAGTGGTAACCTAAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127635 242 + 77229886 TTTTTGTTTACTATAGGTTAATACTATCATATTT--AAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTCGAAAACACCATGTCAGTGGGTACTAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------CTATAAAGCTTGGAGATGGCTTGACAACGGGCTTAGGATAGGGTTAC----AATGCCTCTTTTACTCATTGAAGTGGTAACCTAAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347471 239 + 17472758 TTTTTGTTTACTATAGGTTAATACTATCATATTT--AAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTCGAAAACACTATGTCAGTGGGTACTAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GTATAAAGCTCGGAGATGGCTTGACAACGGGCTTAGGATAGGGTTAC----AATGCCTCTTTTACTCATTGAAGTGGTAACCTAAA----------------AAGA----AAAGGAATGTACATAGAGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387545 242 - 152096393 TTTTTGTTTACTATAGGTTAATACTGTCATAGTT--AAGCATAGGCATGGATTTATTTCGGCATTTTAACAGTTGAAAACGCCATGTCAGTGGGTACTAACTCCGTTCATAA---ATTATTTCCCTACAGAAAAGAAGG---------GTATAAAGCTCAGAGATGGCTTGACAACGGGCTTAGGATAGGTTTAC----AATGCCTCTTTTACTCATTGAAGTGGTAACCTTAA----------------AAGAA-AGAAAGGAGTGTACATAGAGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57336962 243 + 70235451 TGTTTGTTAACTATAGGTTAATACTATCATATTT-AAAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTTGAAAACACCATGTCAGTGGGTACCAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGTTTAGGATACGGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63028373 243 - 75711847 tgtttgttAACTATAGGTTAATACTATCATATTT-AAAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTTGAAAACACCATGTCAGTGGGTACCAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGTTTAGGATACGGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13581148 243 - 18804593 tgtttgttAACTATAGGTTAATACTATCATATTT-AAAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTTGAAAACACCATGTCAGTGGGTACCAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGTTTAGGATACGGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13197845 243 + 18905526 TGTTTGTTAACTATAGGTTAATACTATCATATTT-AAAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTTGAAAACACCATGTCAGTGGGTACCAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGTTTAGGATACGGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60027782 242 - 72318688 TGTTTGTTAACTATAGGTTAGTATTATCATATTT--AAGCATAGTCTTGGATTTATTTTGGCATTTTAACAGTTGAAAACACCATGTCAGTGGGTACCAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGTTTAGGATACGGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 361394 243 - 1517660 tgtttgttAACTATAGGTTAATACTATCATATTT-AAAGCATAGGCATGGATTTATTTTGGCATTTTAACAGTTGAAAACACCATGTCAGTGGGTACCAACTCTGTTCATAA---ATTATTTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGGTGGCTTGACAATGGGTTTAGGATACGGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3461467 242 + 6513552 tgtttgttAACTATAGGTTAATACTATCATATTT--AAGCATGGGCATGGATTTATTTCGGCATTTTAACAGTTGAAAACACCTATTCAGTGGGTACCGACTCCGTTCATAA---ATTATCTCCATACAGGAGAGAAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGTTTAGGATACAGTTAC----AATGCCTCTTTTACTCATTAAAGTGGTAATCTTAA----------------AAGAA-AGAAAGGAATGTACATAGAGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105231021 227 + 117903854 TTTTTGTTTACTGTA-GTTAATACTATCATA------------GGCATGGATTTATTTTGGCATTTTGATGATTGAAAACACCATGTCAG----------CTCTGTTCATAA---TTTTTTTCCATACAGGAGAGTAGG---------GCATAAAGCTCAGAAATGGCTTGACAATGGGGTTAGGATAGGGTTACAATGAATGCCTCTTTTACTCATTAAAGTTGTAACCTAAAAA--------------AAAAA-AGAAAGGAATGTACATAGAGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19424098 237 - 31320352 TTTTTGTTTACTGTA-GTTAATACTATCATA------------GGCATGGATTTATTTTGACATTTTAACAATTGAAAACACCATGTCAG----------CTATGTTCATAA---ATTTTTTCCATACAGGAGAGTAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGGTTAGGATAGGGTTAC----AATGCCTCTTTTACTCATTAGAGTTGTAACCTaaaaaaaaaaaaagaaaagaaaaa-agaaaTGAATGTACATAGAGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619479 223 + 2203405 TTTTTGTTTACTGTA-GTTAATACTATCATA------------GGCATGGATTTATTTTGGCATTTTAACAATTGAAAACACCATGTCAG----------CTCTGTTCATAA---ATCTTTTCCATACAGGAGAGTAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGGTTAGGATAGGGCTAC----AATACCTCTTTTACTCATTAAAGTTGTAACCTAAAAT--------------AAAAA-AGAAAGGAATGTACATAGAGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571610 218 - 14941987 TTTTTGTTTACTGTAGGTTAATACTATCATA------------GGCATGGATTTATTTTGGCATTTTAACAATTGAAAACACCATGTAAG----------CTCTGTTCATAA---ATTTTTTCCATACAGGAGAGTAGG---------GCATAAAGCTCAGAGATGGCTTGACAATGGGCTTAGGATAGGGTTAC----AATGCCTCTTTTACTCATTAAAGTTGTAACCTAAGAA--------------AAAAA-A------AATGTACATAGAGC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1251738 237 - 1406956 TTTCTGTTTACTATAGGTTAATACTATTGCATTT--GAGCAGAGGCATGAGTTTATTTCAGAATTTTAATAATTGAAAACACCACAACAATGGGTACCAATTGTGTTCATAA---GTTATTTCCATACAGGAAAGAAGT---------GTATAAAGCTCAGGGATGGTCTGACGATGGGGCCATGATAGGGTTCC----AAGGCCTCTTTTGCTCATTCAC-TGGTAACTTAAA----------------AAGA-----AAGGAATGTAAATAGAGC i proCoq1.NW_012148742v1 I 64 C 0 s otoGar3.GL873546 11215026 210 - 20685099 -TTCTCTGTACTATAGGTTAGTACTATTGAATGT--AAGTATAGGTGTGAGTTTATCTCAGTATTTTAATAACTGAAAACGCAATGTTGA-AGGTACCAACTGTGTTCAAGA---ATGATTTCTGTACAGGAAGGAAGA---------GGGTAGAGCTGAGAGACTGTCTGAT-----------------------------GCCTCTTTTGCACATGTCC-TGGTAACTTAAA----------------AAGA-----AAGGAATGTAAAAAGAGC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112286905 234 - 122678785 TTCCAGCTTACTACAAGTTAATGCTATTGTCTTTTAAAGCACAGGCTTGGAATTATTTCAGCATTTTAACAGTTGAAAGAGCCATGTCAATGGGTACTCACTCTGTTCATCA---GTGGTGTCCCTAAAGGAAAGGAGGTAAATTGGTGTGTAAGACTCAGGGTGTATTTGA-------------GTAGAGTGAC----AATGTGTCTTTTCTCC-------TGGCAACTCAAA----------------AAGGATAGAAAGGAATATAAATACAGC i canFam3.chr1 I 2 I 209 s dasNov3.JH575754 465892 238 - 2150887 CTTCTGCTTACTAGA-GTTAATAAAATTGTATTT--AAGCATAGGCATGGAATTACTTCAGCATTTGAATGACTGCAAGAGCCAGGTCTATGGGTACCAGCTCTGTTCATAACGCATTCATTCCAAACAAGAGAGGAGGTGGTTTAGTGTATAAGGATCACGGATAGTTTGACAATGGG-----------GTGAC----AG-GTCTATTTTGCTTATTAA--TGGTAACATAAA----------------AGATG-AGAAAA-AATGAAAATACAGC i dasNov3.JH575754 C 0 C 0 a score=7980002.000000 s hg38.chr18_GL383571v1_alt 99034 636 + 198278 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCAAAATGTGCCTGGCATTAAAATGGCTGTGTCGCAACATCATCTACCCATAGGAAGTGTTAAGAGATAAGATCCAAC-----AGGTAGATCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGATAAAAGTAATTACTGGGA-TTTTGTCAGGGGGGCACTATAGTGGAAGTGGTG-TTTCGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTAGGATTAAAAT-AAATGTCATAGAGGGAGCAGACAATGGAAATGAGAAGAGCTATATTCAAACATTGAAAATA--CAGGATCAAGACAATT-ACTATACAATAGAGATG-ACAACAGCAAGGAATAGTAAACAGAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGAATGGGGGAAAGGGGAAAGA-GTTAGAACAAGCAG--------CATTGGTCCCGT s panTro5.chr18 65003618 637 + 78221452 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCAAAATGTGCCTGGCATTAAAATGGTTGTGTCACAACAGCATCTACCCATAGGAAGTGTTAAGAGATAAGATCCAAC-----AGGTAGATCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGATAAAAGTAATTACTGGGA-TTTTGTCAGGGGGGCACTATAGTGGAAGTGGTG-TTTTGGAAAGATTAATTTAATCTAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAGATAAAATGTCATAGAGGGAGCAGACAATGGAAATGAGAAGAGCTATATTCAAACATTGAAAATA--CAGGATCAAGACAATT-ACTATACAATAGAGATG-ACAATAGCAAGGAATAGTAAACAAAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGAATGGGGGAAAGGGGAAAGA-GTTAGAACAAGCAG--------CATTGGTCCCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64127877 637 + 77229886 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCAAAATGTGCCTGGCATTAAAATGGTTGTGTCACAACAGCATCTACCCATAGGAAGTGTTAAGAGATAAGATCTAAC-----AGGTAGATCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGATAAAAGTAATTACTGGGA-TTTTGTCAGGGGGGCACTATAGTGGAAGTGGTG-TTTTGGAAAGATTAATTTAATCTAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAGATAAAATGTCATAGAGGGAGCAGACAATGGAAATGAGAAGAGCTATATTCAAACATTGAAAATA--CAGGATCAAGACAATT-ACTATACAATAGAGATG-ACAATAGCAAGGAATAGTAAACAAAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGAATGGGGGAAAGGGGAAAGA-GTTAGAACAAGCAG--------CATTGGTCCCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5347710 632 + 17472758 CGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCAAAATGTGCCTGGCATTAAAATGGCTGTGTCGCAACATCATCTACCCATAGGAAGTGTTAAGAGATAAGATCCAAC-----AGGTAGATCAGAGCCAAACAGCATCTGTCTATGGAGTACACTA----TAATTCTATAGGATAAAAGTAATTACTGGGA-TTTTGTCAGGGGAGCACTACAGTGGAAGTGGTG-TTTTGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GGTAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTACCT-GGATTAAAATAAAATGTCATAGAGGGAGCAGACAATGGAAATGATAAGAGCTATATTCAAACATTGAAAATA--CAGGATCAAGACAATT-ACTATACAATAGAGATG-ACAATAGCAAGGAATAGTAAACAAAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGAATGGGGGAAAGAGGAAAGA-GTTAGAACAAACAG--------CATTGGTCCCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139387787 638 - 152096393 ACTTTGTTTT-------------------------------------------------------------------------------------CTGGCAAAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TCTCAAAATGTGCCTGGCATTAAAATGGCTGTGTCACAATATCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGATCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGATAAAAGTAATTACTGGGA-TCTTGTCAGGAGAGCACTATAGTGGAAGTGGTG-CTTTGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAGAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGCATTAAAATAAAATGTCATAGAGGGAGCAGACAGTGGAAATGAGAAGAGCTATATTCAAACATTGAAAATA--CAGGATCAAGACAATT-ACTATACAATAGAGATG-ACAATAGCAAGGAATAGTAAACAAAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGGATGGGGGAAAGGAGAAAGA-CTTAGAACAAACAG--------CATTGGTCCCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57337205 631 + 70235451 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCGAAATGTGCCTGGCATTAAAATGGC--TGTCACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAATAGCATCTGTCTATGAAGTACACTATAATTAATTCTATAGGAT-AAAGTAATTACTGGGA-TTTTGTCAGGGGAGAACTATAGTGGAAGTGGTG-TTTCGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCAGACAGTGGAAATGAGAAAAGCTATATTCAAACATTGAAAATA--CAGGATGAAGACAATTAACTATACAATAGAGATG-AC-ATAGCAAGGAATAGTACACAAAACATTCAGGTTTGCTTTTGCTCATATGAAAATAAATTCAAATCTAGGCAACCCAGAGCTGGTGCAATTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAACAGGGGAAAAGGGGAAAG----AAAACAAACAG--------CATTGGTCCCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63028616 631 - 75711847 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCGAAATGTGCCTGGCATTAAAATGGC--TGTCACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAATAGCATCTGTCTATGAAGTACACTATAATTAATTCTATAGGAT-AAAGTAATTACTGGGA-TTTTGTCAGGGGAGAACTATAGTGGAAGTGGTG-TTTCGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTGTAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCAGACAGTGGAAATGAGAAAAGCTATATTCAAACATTGAAAATA--CAGGATGAAGACAATTAACTATACAATAGAGATG-AC-ATAGCAAGGAATAGTACACAAAACATTCAGGTTTGCTTTTGCTCATATGAAAATAAATTCAAATCTAGGCAACCCAGAGCTGGTGCAATTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAACAGGGGAAAAGGGGAAAG----AAAACAAACAG--------CATTGGTCCCAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13581391 631 - 18804593 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCGAAATGTGCCTGGCATTAAAATGGC--TGTTACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAATAGCATCTGTCTATGAAGTATACTATAATTAATTCTATAGGAT-AAAGTAATTACTGGGA-TTTTGTCAGGGGAGAACTATAGTGGAAGTGGTG-TTTCGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCAGACAGTGGAAATGAGAAAAGCTATATTCAAACATTGAAAATA--CAGGATGAAGACAATTAACTATACAATAGAGATG-AC-ATAGCAAGGAATAGTACACAAAACATTCAGGTTTGCTTTTGCTCATATGAAAATAAATTCAAATCTAGGCAACCCAGAGCTGGTGCAATTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAACAGGGGAAAAGGGGAAAG----AAAACAAACAG--------CATTGGTCCCAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13198088 630 + 18905526 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAAATTTGCTCCTCCTTATAATGGCAACATCAAAGTGAAC-TGTCGAAATGTGCCTGGCATTAAAATGGC--TGTCACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAATAGCATCTGTCTATGAAGTACACTATAATTAATTCTATAGGAT-AAAGTAATTACTGGGA-TTTTGTCAGGGGAGCACTATAGTGGAAGTGGTG-TTTCGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACTTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCAGACAGTGGAAATGAGAAAAGCTATATTCAAACATTGAAAATA--CAGGATGAAGACAATT-ACTATACAATAGAGATG-AC-ATAGCAAGGAATAGTACACAAAACATTCAGGTTTGCTTTTGCTCATATGAAAATAAATTCAAATCTAGGCAACCCAGAGCTGGTGCAATTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAACAGGGGAAAAGGGGAAAG----AAAACAAACAG--------CATTGGTCCCAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60028024 627 - 72318688 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAAATTTGCTCCTCCTTATAATAGCAATATCAAAGTGAAC-TGTCGAAATGTGCGTGGCATTAAAATGGC--TGTCACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAAAGCAGAGCCAAATAGCATCTGTCTATGAAGTACACTATAATTAATTCTATAGGAT-AAAGTAATTACTGGGA-TTTTGTCAGGGGAGCACTATAGTGGAAGTGGTG-TTTTGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAAATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTACCTGGGATTAAAATAAAATGTCATATAGGGAGCAGACAGTGGAAATGAGAAGAGCTATATTCAAACATTGAAAATA--CAGGATGAAGACAATT-ACTATACCAT---GATG-AC-ATAGCAAGGAATAGTACACAAAACATTCAGGTTTGCTTTTGCTCACATGAAAATAAATTCAAATCCAGGCAACCCAGAGCTGGTGCAGTTGCTT----AAAGT--TACTCTCAGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAATAGGGGGAAAGGGGAAAG----AAAACAAACAG--------CCTTGGTCCCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 361637 630 - 1517660 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAGATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCGAAATGTGCCTGGCATTAAAATGGC--TGTCACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAACAGCATCTGTCTATGAAGTACACTATAATTAATTCTATAGGAT-AAAGTAATTACTGGGA-TTTTGTCAGGGGAGCACTATAGTGGAAGTGGTG-TTTCGGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTTAGAG-TGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATGTAGGGAGCAGACAGTGGAAATGAGAAAAGCTATATTTAAACATTGAAAATA--CAGGATGAAGACAATT-ACTATACAATAGAGATG-AC-ATAGCAAGGAATAGTACACAAAACATTCAGGTTTGCTTTTGCTCATATGAAAATAAATTCAAATCTAGGCAACCCAGAGCTGGTGCAATTGCTT----AAAGT--TACTCTCGGGGACTTGGGTTCA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAACAGGGGAAAAGGGGAAAG----AAAACAAACAG--------CATTGGTCCCAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3461709 633 + 6513552 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGG-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAAC-TGTCGAAATGTGCCTGGCATTAAAATGGC--TGTCACAATGTCATCTACCCATAGGAAGTATTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGAT-AAAGTAATCACTGGGA-TTTTGTCAGGGGAGCACTATAGTGGAAGTGGTG-TTTCAGAAAGATTAATTTAATCCAT-------------ACCAG------------------GATAGTTCAGAG-GGT--------GTAGATTATAAAGTAAAAG-GTCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCAGACAGTGGAAATGAGAAGAGCTATATTCAAACATTGAAAATA--CAGGATGAAGACAATT-ACTATACAATAGAGATG-GC-ATAGCAAGGAATAGTACACAAaacatacaggtttgcttttgctcatatgaaaataaattcaaatctaggcaacccagagctggtgcagttgctt----aaagt--tactctcagggacttgggttcA-------------------------------------------------------ATCTGCTTTCTAG------------------------ACAGGAATGGGGGAAAGGGGAAAGA-GTTAGAATAAACAG--------CATTGGTCTCAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105231248 635 + 117903854 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTTCTCCTTATAACAGCAACATCAATGTGAAC-TGTCAAAATGTACCTGGCATTAAAATGGCTATGTCACAGTATCATCTATCCATAggaagtattaagagataagatccaac-----aggtagagcagagccaaatagcatatgtccatggagtacactgcaattaattctataggataaaagtaattactggga-ttttgtcaggggagcaaaatggtcaaa-gtgtg-ttttggaaagattaatttaattCAT-------------ACCAG------------------GACAGTTTAGAG-TTT--------GTAGATTATAAACTAAAAG-GCCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCATACCTTGGAAATGAGAAGAGCTATATGTAAACATTGAAAACA--CAGGATCAAGAGAATT-ACTATACAATAGAGATG-ACAACAGTGAGGAATATTAAACacaacattcaggtttgcttttgctcatatgaaaataaattcaaatgtaggcaacccagagctggtgtagttgttt----aaagt--tactctcagggactttggttca-------------------------------------------------------ttttgctctccgG------------------------ACAGGAAGAGGGGAAAGGGGGAAAGGGTTAGAACAAACAG--------CACTGGTCCC-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19424335 632 - 31320352 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGTTCCTCCTTATAATAGCAACATCAACGTAAAC-TGTCAAAGTATACCTGGCATTAAAATGGCTATGTCACAGTATCATCTACCCATAGGAAGTATTAAGAGATAAGATTCAAC-----AGGTAGAGCAGAGCCAAATAGCATATGTCCATGGAGTACACTGCAATTAATTCTATAGGATAAAAGTAATTACTGGGA-TTTTGTCAGGGGAGCACTATGGTCAAAGGGGTG-TTTTGGAAAGATTAATTCAATCCAT-------------ACCAG------------------GACAGTTTAGAG-TTT--------GTAGATTATAAAATAAAAG-GCCAGTTAATAACCTGTTATCATTATCTAGGATTAAAATAAAATGTCATATAGGGAGCATACCTTGGAAATGAGAAGAGCTATATTCAAACATTGAAAACA--CAGGATCAAGAGAATT-AATATACAATAGAGATG-ACA--AGTGAGGAATATTAAACATAACATTCAGGTCTGCTTTTGctcatatgaaaataaattcaaacgtaggcaactcagagctgctgtagttgttt----aaagt--tactctcagggactttggttca-------------------------------------------------------ttctGCTTTCTAG------------------------ACAGGACGAGGGGAAAGTGGGAAAG----AGAACAAACAA--------CATTGGTCCCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1619702 634 + 2203405 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTCCTCCTTATAATAGCAATATCAACGTGAAC-TGTCAAAATGTACCTGGCATTAAAATGGCTATGTCACAGTATCATCTATCCATAGGAAGTTTTAAGAGATAAGATCCAAC-----AGGTAGAGCAGAGCCAAATAGCATATGTCCATGGAGTACATTGCAATTAATTCTATAGGATAAAAGTAATTACTGGGA-TTGTGTCAGGGGAGCACTATGGTCAAAGTGGTG-TTTTGGAAAGATTAATTTAATCCAT-------------ACTAG------------------GGCAGTTTAGAG-TTT--------GTAGATTATAAACTAAAAG-GCCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCATACCTTGGAAATGAGAAGAGCTATATTCAAACATTGAAAACA--CAGGATCAAGAGAATT-ACTATACAATAGAGATG-ACAACAGTGAGGAATAttaaacataacattcaggtttgcttttgctcaaatgaaaataaattcaaatgtaggcaacccagagctagtgtagttgttt----aaagt--tactgtcagggactttggttca-------------------------------------------------------ttctGCTTTCCGG------------------------ACAGGAAGAGGGGAAAGGGGAAAAG----AGAACAAACAG--------CATTGGTCCCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3571828 638 - 14941987 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAATGTGGAC-TGTCAAAATGTAACTGGCATTAAAATGGCTATGTCACAGTATCATCTATCCATAggaagtattacgaggtaagatccaac-----aggtagagcagagccaaatagcatatgtccatggagtacattgcaattaattttataggataaaagtaattactggga-ttttgtcaggagagcactatggtcaaagtggtg-ttttggaaagattattttAATCCAT-------------ACCAG------------------GACAGTTTAGAG-TTT--------GTAGATTATAAACTAAAAG-GCCAGTTAATAACCTGTTATCATTATCTGGGATTAAAATAAAATGTCATATAGGGAGCATACCGTGGAAATGAGAAGAGCTATATTCAAACATTGAAAACA--CAGGATCAAGAGAATT-ACTATACAATAGAGATG-AAAACAGTGAGGAATAttaaacataacattcaggtttgcttttgctcatatgaaaataaattcaaatgtaggcaacccagagctggtgcagttgttt----aaagt--tactctcagggactttggttca-------------------------------------------------------ttctGCTTTCCAG------------------------ACAGGAAGAGGGGAAAGGGGGAAAGAGTTAGAACAAACAG--------CATTGGTCTCAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1251975 639 - 1406956 AGTTTATTTT-------------------------------------------------------------------------------------CTGGC-AAAACCAAATTTACT-CTTATGAAAAGAGCAAAATCAAAGTGAACATGTCAAAATGTGCCTGGCATTACAATGGCTGTGTCAAAATATCATATATCCATAGGAAGTATTAAGAGATAAGAGACAAC-----AGTA-GGTCAGAGCCAAATAATATATGTTCTTGGAGTACATTGTAATTACTTCTAAAGGATAAAAATAATTACTGGGA-TTTTGTCAGAGGAGCAGTATGATGGAAGTGGTG-TTTGGGGAGGATTAATTTAATCCAT-------------ACCAG------------------GACAGTTTAGAG-TTT--------GGAGATAATAAAGGGAAAG-GTCAGTTAATAACCTATTATCATTATCCAGGATTAAAAGAAAAAGTCATATAGGGAGGAGGTGGTGGAAATGAGAAGGGGTATATTCAAGGATTGCAACCA--CAGAATTAAGAGAATT-ATTATGCACTGGAGATC-AACATAGCAAGAAATAGTAATTATAAAATTAAGGTTTGTTTTTTCTTCTATAAAAATAAATTCAAATGAAGGCAACCCAGAGCTGGTGCAGTTGCTT----AATGTTTTGCTCTCTGAGGTCTTGCTTCA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGAAGAAGTGGAAAGGGGAAAGAGTTAGAACAAGCAG--------CATTGCTCCCAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11215236 614 - 20685099 AGTTTGTTTT-------------------------------------------------------------------------------------CTGGC-AAAAACACATTTACTCCTCATGAAAACAGCAGCATCAAAGAGAACATGT-AAAATGTGCTGGGCATTCAAATGGCCTTGTCAAAATACCATGTATCCATAGGAAGTATGAAGAGGTAAGATCTAAC-----TGGAGGGTCAGAGCCAAATAGTGTA-GTTTTTGGAGTGTGCTGTCATTACTTCTAAAGGATAAAAATAATGACTGGGA-TTCTGTCAGAAGAACAGTATGGAGGAAGTGGTA-CTTTGGGAGGATTAGTTTAATCCAT-------------ACCGG------------------GATAGTTTAGAG-TTT--------GGAGATTGCAAAGGGAAAG-GTCAGTTAATGATCTATTATAACTATCCAGGTTTTAAA-AAAAAGCCATATAGGGAGGAGATGGCGGAAATGAGAAGAGGGATATTCAAGGATGGAAACCA--CAGGACT--GAGAATG-ATTACACACTAGAGGAA-AACAGAGCAGGAAATAGTAAATATAAAATTCAGATTCATTTTTTAGTCCATAGAAATAAATTCAAAGATGTGCAATTCAGAGCTGG----------------------GGCTCCATGAGACCGTGGTTGA-------------------------------------------------------ATCTGCTTTCCAG------------------------ACAGGACGAAGTGAAAAGAGCAAAG----AGAAGAATCAG--------CACTGGGCCCAT i otoGar3.GL873546 C 0 I 521 s canFam3.chr1 112287348 827 - 122678785 aatttatttttatctttataatttcttttatttttataattctttataattttataaaatataaaattatattttataatataCATATTCATTCCCTGGC-AAAACCAAATTTTCTCTTCCTTATAATA------------------TATCAGAATGTGCTTGGCATTAAAATGGCTGTGTTAGAATATCAAATACCCATAGGAATTGTGAAGGGATAAGGTCTAACAAGTAAGGTAGGTCAGAATCAAATAATATAAGTCCCTAAAGGTCATTGTAATTAATTCTATAGGACAAGAATCATTACTGAGATTTTTGTCAGGGAGATACTATGGTAGAAATGGTG-TTTTGGGAAGATTAACTTAATCCACGGTTAAATGGTAAAACAGAGAGTTTAAAAAATTGGAGAGAGTTTAAAG-GGTAGTTTAAAATAGTGTATAAAAAAAGAG-TTTGGTTAGTAACTGGTTTTCTTTTTAAAGGATGAAAAATAGAAGTCAAATAG-----------TGGAAATGAGAAAAACT-TTTTCAAAGATCAGAAACA--GAGGGTTAGGAGAATC-ATCATGTGTTAGTGATGTAGAATAGCAAGGATTATGAAATATAAAGTTCCAGTTTGTTTTTCCTCAGATAAAA--AAAATCAAATATGGTCA--CCAGGGCTGGTACAGTTAGTTGCACAATTT--TCTTTCCAGGAAACTTGGTTCACAAGGAGCATGATAGGTGCCATCTAACAACAGAGGAAAATATTTTCTCTTGATATTTCtttttttaagattttatttattaatgagagacacacagagagaggggcagagacataggtagagggagaagcaggctctccacaaggggcccga i canFam3.chr1 I 209 I 11 s dasNov3.JH575754 466130 601 - 2150887 AATTTATTTT-------------------------------------------------------------------------------------CTGGC-TAAAGCAAATTGCCTCCTCGTTATAACAGCAACATCAAATAGAACATGTCGAAATGTGCCTGGCATTAAAATGAC--TGTCAAGATATCAAATACCCATAAGAAGTAATGAGAGATAAGAGCCAAC-----AAGTAGCTCAGGGACAAATAATATCTGTCCTT---GTGCACTGTAATTAAATCTATAGGATAAGAATAGTTATTGAGA-TTT-------GGAATACTTTGGTGAGAGCAGTGTTTTTGGAAAGATTAATTCATC-----------------AGCAG------------------GATAATTTAGAGCTTT--------GAATATTAATTTATAAATGTATAAGTTAAAAA-----GATCATGATCCAGAAGTAAAACAAAATGCAAAATAGGAAGGCAACAGTGGGAATTAGCAAA-TTATTTTTAAA-ATTGAAAAAAAGCAGAATTAAGGTAATT-TTAATACAATGGAGATG-AA---GGATAGTATCATTATATATAAAAGGCAGGTTGGCTTTT-CTCACATAAAAATGAATTCAGATACAGGTAACCCAG----------------C----TAGGT--GACTGCCAGGGATTTTGGCTCAC------------------------------------------------------ATCTGCTTTCCAG------------------------GCAGGACTAGGGAGAAGGGGAAAGC-ACTGGAACAAACAG--------CACATGCTCCAT i dasNov3.JH575754 C 0 C 0 a score=444739.000000 s hg38.chr18_GL383571v1_alt 99670 49 + 198278 TTATCAAGA----------------------AAGGAAAATAATTA--CACTAAATTGTTT-TAAACTTTCCCTT s panTro5.chr18 65004255 49 + 78221452 TTATCAAGA----------------------AAGGAAAATAATTA--CACTAAATTGTTT-TAAACTTTCCCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64128514 49 + 77229886 TTATCAAGA----------------------AAGGAAAATAATTA--CACTAAATTGTTT-TAAACTTTCCCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5348342 49 + 17472758 TTATCAAGA----------------------AAGGAAAATAATTA--CACTAAATGGTTT-TAAACTTTCGCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139388425 49 - 152096393 TTACCAAGA----------------------AAGGAAAATAATTA--CACTAAATTGTTT-TAAACTTTCTCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57337836 49 + 70235451 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTTTCCCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63029247 49 - 75711847 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTTTCCCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13582022 49 - 18804593 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTTTCCCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13198718 49 + 18905526 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTTTCCCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60028651 49 - 72318688 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTTTCCCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 362267 49 - 1517660 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTTTCCCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3462342 45 + 6513552 TTGTCAAGA----------------------AAGGAAAATAATGA--CACTAAATTATTT-TAAACTT----TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105231883 48 + 117903854 --ATCAAGA----------------------AAAGAAAACAATTA--CACGTAGTTGTTTGTAAGCTTTCCCTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19424967 50 - 31320352 TTATCAAGA----------------------AAAGAAAATAATTA--CACTTAGTTGTTTTTAAGCTTTCCTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1620336 50 + 2203405 TTATCAAGA----------------------AAAGAAAATAATTA--CACTTAGTTGTTTTTAAGTTTTCCCTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3572466 50 - 14941987 TTATCAAGA----------------------AAAGAAAATAATTA--CACTTAGTTGTTTTTAAACTTTCCCTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1252614 49 - 1406956 CTATTAAGA----------------------AAGAAAAATAATTA--CACAAAACTTTTT-CAAACTTTCCCTT i proCoq1.NW_012148742v1 C 0 I 105 s canFam3.chr1 112288186 73 - 122678785 atcccaggaccctgggatcacgccctaagccaaagcagacgctcaaccactgaaccaccc-gggggtcccTCTC i canFam3.chr1 I 11 I 14 s dasNov3.JH575754 466731 26 - 2150887 -----------------------------------------TTTG--CACATAAGGAGTC-T----TCCCCCTT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11215850 521 - 20685099 I a score=684317.000000 s hg38.chr18_GL383571v1_alt 99719 75 + 198278 TCGTCTTATCATTATAACTACTTCCCGGGGCCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCATGCTCCCCCT s panTro5.chr18 65004304 75 + 78221452 TTGTCTTATCATTATAACTACTTCCCCGGGCCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCATGCTCCCCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64128563 75 + 77229886 TTGTCTTATCATTATAACTACTTCCCCGGGCCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCATGCTCCCCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5348391 75 + 17472758 TCGTCTTATCATTATGACTACTTACCGGGGCCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCATGCTCCCCCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139388474 75 - 152096393 TCATCTTATCATTATAACTACTTCCTGGGACCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCAGGCTCCCCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57337885 75 + 70235451 TCGTCTTATCATTAGAACTACTTCCCCAGGCCAC--TGATTGCAGATCACGGCGGGAGGTATCAGCAGGCTCTCTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63029296 75 - 75711847 TCGTCTTATCATTAGAACTACTTCCCCAGGCCAC--TGATTGCAGATCACGGCGGGAGGTATCAGCAGGCTCTCTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13582071 75 - 18804593 TCGTCTTATCATTAGAACTACTTCCCCAGGCCAC--TGATTGCAGATCACGGCgggaggtatcagcaggctctctct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13198767 75 + 18905526 TCGTCTTATCATTAGAACTACTTCCCCAGGCCAC--TGATTGCAGATCACGGCGGGAGGTATCAGCAGGCTCCCTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60028700 72 - 72318688 TCGTCTTATCATTAGAACTACTTCCCCA-GCCAC--TGATTGCAGATCACAGC--GAAgtatcagcaggctccctct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 362316 75 - 1517660 TCGTCTTATCATTAGAACTACTTCCCCAGGCCAC--TGATTGCAGATCACGGCAGGAGGTATCGGCAGGCTCCCTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3462387 75 + 6513552 TCCTCTTATCATTAGAACTACTTCCCCAGGCCAC--TGATTGCAGATCACAGCGGGAGGTATCAGCAGGCTCCCTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105231931 75 + 117903854 TCATCTTATTATTAGAGCTATTTCGTGGGACCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCAGGCTCCCTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19425017 75 - 31320352 TCATCTTATTATTAGAGTTATTTCGTGGGCCCAC--TGATTGCAGATCACAGTGGGAGgtattagcaggctccctct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1620386 72 + 2203405 TCA---TATTGTTAGAGCTCTTTCGTGGAACCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCAGGCTCCCTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3572516 75 - 14941987 TCATCTTATTATTAGAGCTATTTCGTGGGACCAC--TGATTGCAGATCACAGTGGGAGGTATCAGCAGGCTCCCTCT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112288273 45 - 122678785 TCAT----TCATAAGAACTATCTCACATGACCACAATGACC-----------------GTATTGGC----------- i canFam3.chr1 I 14 C 0 s dasNov3.JH575754 466757 65 - 2150887 AACTCTATTCCTTAGAACACCACCGCAGGACCAC--TGACTGCTGACCACTGCAGGATGCCTCAGCT---------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1252663 105 - 1406956 I e otoGar3.GL873546 11215850 521 - 20685099 I a score=5141581.000000 s hg38.chr18_GL383571v1_alt 99794 478 + 198278 TCTCCTGGCAGGCCTGTTGGGTGGGGCCA---GTG---AGTACCATCagg----agact--gagatatcagaatgcttattatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tgctt---gcaaaggtagaaaatttctgtcagatggaccctctcctacagtttcagctctcacagggataaatggtaaccattctcccttcttgccccttttggctttcctttttgggttttcttaacccagcacacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgcTA--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAAT-AAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGGTAATATAAAAATGAAACAAATTCTCAAATTTAGATGAAAA---TATG s panTro5.chr18 65004379 478 + 78221452 TCTCCTGGCAGGCCTGTTGGGTGGGGCCA---GTG---AGTACCATCagg----agact--gagatatcagaatgcttattatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tgctt---gcaaaggtagaaaatttctgtcagatggaccctctcctacagtttcagctctcacagggataaatggtaaccattctcccttcttgccccttttggcttccctttttggtttttcttaacccagccaacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgcTA--AA--CTAGATGAATATGTGA-AAAAGTTAAATAATTTTGATTA-AAAACTGCCTCTGAATAAAACTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTAGATGAAAA---TATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64128638 478 + 77229886 TCTCCTGGCAGGCCTGTTGGGTGGGGCCA---GTG---AGTACCATCagg----agact--gagatatcagaatgcttattatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tgctt---gcaaaggtagaaaatttctgtcagatggaccctctcctacagtttcagctctcacagggataaatggtaaccattctcccttcttgccccttttggcttccctttttggtttttcttaacccagccaacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgcTA--AA--CTAGATGAATATGTGA-AAAAGTTAAATAATTTTGATTA-AAAACTGCCTCTGAATAAAACTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTAGATGAAAA---TATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5348466 479 + 17472758 TCTCCTGGCAGGCCTGTTGGGTGGGGCCA---GTG---AGTACCATCagg----agact--gagatatcagaatgcttattatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tgctt---gcaaacgtagaaaatttctgtcagatggaccctctcctacagtttcagctttcacagggataaatggtaaccattctcccttcttgccccttttggcttccctttttggtttttcttaacccagcccacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgcTA--AA--CTAGATGAATATGTGA-AAAAGTTAAATAATTTTGATTATAAAACTGCTTCTGAATAAAACTGGGGTAAAATAAATGAAGAGATGTCGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTAGATGAAAA---TATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139388549 479 - 152096393 TCTCCTGGCAGGCCTGTTGGGTGGGGCCA---GTG---AGTACcagcagg----agact--gagatattggaatgcttattatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tgctt---gcaaaggtagaaaatttctgtcagatggaccctctcctacagtttcagctctcacagggacaaatggtaaccattctcccttcttgccccttttggcttccctttttggtttttcttaacccagcccacactttcggaaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgcTA--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAACTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTAGATGAAAA---TACG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57337960 475 + 70235451 TTTCCTGGCAGGCCTGTTGGGTGGGGCCA---GCG---AGTATcagcagg----agact--gagatatcgaggtgct--ttatttctctgactc-ttccagtttggccacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggataggtggtaaccactctaacttcttgctccttttggcttccgtatttggtttttcttaacccaacccacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgctg--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTACATGAAAA---TATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63029371 449 - 75711847 TTTCCTGGCAGGCCTGTT------------------------------------agact--gagatatcgagatgct--ttatttctctgactc-ttccagtttggccacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggataggtggtaaccactctaacttcttgctccttttggcttccctatttggtttttcttaacccaacccacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgctg--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTACATGAAAA---TATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13582146 449 - 18804593 tttcctggaaggcctgtt------------------------------------agact--gagatatcgagataat--ttatttctctgactc-ttccagtttggccacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggataggtggtaaccactctaacttcttgctccttttggcttccctatttggtttttcttaacccaacccacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgATG--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTACATGAAAA---TATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13198842 475 + 18905526 TCTCCTGGCAGGCCTGTTGGGTGGGGCCC---GCG---AGTATcagcagg----agact--gagataccgagatgct--ttatttctctgactc-tcccattttggtcacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggataggtggtaaccactctaacttcttgctccttttggcttccctatttggtttttcttaacccaacccacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgctg--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTATATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTACATGAAAA---TATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60028772 475 - 72318688 tctcctggcaggcctgttggttggggcca---gcg---agtatcagcagg----agact--gagatatccagatgct--ttatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggatagatggtaaccactctcccttcttgctccttttggcttccctatttggtttttcttaacccagcctacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctgctag-tttcctgctg--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATGGGAAG-TTAACAAATAAAGATCCTCTTGGTTAATACAAAAACGAAATAAATTCTCAAATTTACATGAAAA---TATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 362391 475 - 1517660 TCTCCtggcaggcctggtgggtggggcca---gcg---agtatcagcagg----agact--gagatatcgagatgct--ttatttctctgactc-tcccattttggccacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggataggtggtaaccactgtaacttcttgctccttttggcttccctatttggtttttcttaacccaacccacacttttgggaacag-tccttcatttcttcaattacctcttttatgtgtgctactag-tttcctgctg--AA--CTAGATGAATACGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTACATGAAAA---TATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3462462 477 + 6513552 TCTCCTGGCAGGCCTGTTGGGTGGGGCCA---GCG---AGTATcagcagg----agact--gagatctcgagatgcttattatttctctgactc-tcccagtttggccacagtctgg-aagtgacaa---c---tggtt---gcaaaggtagaaaa--tctgtcagaaggaccctctcctacagtttcagctctcacagggatagatgggaaccactctcccttcttgctccttttggcttccctatttggtttttcttaacccagcccacacttttgggaacag-tccctcatttcttcaattaccccttttatgtgtgctactag-tttcctgctg--AA--CTAGATGAATATGTGA-AAAAATTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGGAAG-TTAACAAATAAAAATCCTCTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTACATGAAAA---TATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105232006 476 + 117903854 TCTCCTGGAATACCTGTTGGGTGGGGTCA---GTG---AGTACCAGTGGGAGGGAGACC--AAGATATCTGAATGC---TTATTTCTCTGACTC-TATCAGTTTGGCCACAGTCTGG-AAGTGACAA---G---TGCTT---GCAAAGGTAGAAAATTCCGGTCAGATGGCCCCTCAACTATAGTTTCATCTCTCAAAGGGATAAGCAGGAGCCACTCTCCTTTCTTGCTCCTTTTGGCTtcgctttctggtttctctt-----agcccacactttcgggaacag-tccctcatttgttcaattacctcttttatgtgtgctactcg-tttcctgctg--AA--CGAGATGAATATGTGA-AAACAGTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTGTGGAAAGTTTAACAAGTAAAAATCCACTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTGTATGAAAA---TATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19425092 457 - 31320352 tctcctggcatacctgttgggtggggcca---gtg---agtaccagcagg------------agatATCCGAATGC---TTATTTCTCTGACTC-TAACAGTTTGGCCACAGTCTGG-AAGTGATAA---C---TGCTT---ACAAAGGTAGAAAATTCCGGTCAGATGGTCCTTCAACTACAGTCTCATCTCTCAAAGGGGTCAGCGGGAATGCCTCTCCTTCC---------TTGGCTtccctttttggtttctctt-----agcccacacttttgagaacag-tccctcacttcctcaattacctcttttatgtgtactactcg-tttcttgctg--gA--CTAGATGAATATGTGA-AAACAGTAAATAAGTTTGATTATAAAACTGCCTCTGAATAAAATTGGAGTAAAATAATTGAAGAGATGTTGTGTAGAAAGTTTAACAAGTAAAAATCCACTTGGTTAATATAAAAATGAAACAGATTCTCAAATTTGCATGAAAA---TATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1620458 466 + 2203405 TCTCCTGGCATACCTGTTGGGTGGGGCCA---GTG---GGTACCAAAGGG----AGACT--GAGATATCTGAATGC---TTATTT------CTC-TAACAGTTTGGCCACAGTCTGG-AAGTGACAA---C---TGCTT---GCAAAGGTAGAAAATTCCGGTCAGACGGCCCCTCAACTACAGTTTCATCTCTCAAAGGGATAAGCGGGAACTACTCTCCTTCCTTGCTCCTTTTGGCTtccctttttggtttctctt-----agcccacacttttgggaacag-tccctcacttcttcaattacctcttttatgtgtgctactca-tttcctgATG--AA--CTAGAAGAATATGTGA-AAACAGTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTATAGAAAGTTTAACAAGTAAAAATCCACTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTGTATAAAAA---TATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3572591 473 - 14941987 TCTCCTGGCATACCTGTTGGGTGGGGCCA---GTG---AGTACCAGCGGG----AGACT--GAGATATCCCAATGC---TTATTTCTCTGACTCTTAACAGTTTGGCCATAGTCTGG-AAGTGACAA---C---TGCTT---GCAAAGGTAGAAAATTCCAGTCAGATGGCCCCTCAACTACAGTTTCATCTCTCAAAGGGATAAGCAGGAACCACTGTCCCTTCTTGCTCCTTTTGGCTtccctttttggtttctctt-----agcccacacttttgggaacag-tccctcatttcttcaattacctcttttatatgtgctactca-tttcctgctg--AA--CTAGATGAATATGTGA-AAACAGTAAATAATTTTGATTATAAAACTGCCTCTGAATAAAATTGGGGTAAAATAAATGAAGAGATGTTGTGTAGAAAGTTTAACAAGTAAAAATCCACTTGGTTAATATAAAAATGAAACAAATTCTCAAATTTGTATGAAAA---TATG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11216371 471 - 20685099 TCTCCTGGCCGGTCTGCAGAGTGCAGCCAAAGGCA---AGTGCCATCAGC----AGACTAAGAAATGTAGGGACAC---TTATTTCCATGACTC-TCCCAGCTTGGCCACAGTGTGG-TGGGGACAA---CCTTTCCCT---GTAAAGGTAGCAAATTCATACCAGAAGGCTCCTTTCCCCC--TCTCAGCTCTCAGAGGGATGTGTGGTAACCATCCTCCC-CCTCACCCCTGTTGGCTTCCCGTGTTGGTTTCCTTTAACTCAGCC-GCACTGCTGAGAATAG-ACCCTCGTTTCTCTAATGACTCCTTCTATGTGGGCTACTTG-TCTTCAGCTG--AAACCCAGATAAATATAAGAGAAAAAGCAAATAGGtttaattataaaattatttatGAG-AAAATTGGGGAAGGAGAAGT----AACTACTGGGTAGGAAG-TTAGCAAGTAAA-ATCTACTTG-----CATAAAAATAAAACAAA--CTCAAATTTGCATGAAAA--GTATG i otoGar3.GL873546 I 521 I 299 s canFam3.chr1 112288318 455 - 122678785 -CTCTTggca--cctgtcagatg--gtca---gtggcaagtaccagcagg----aaact--gagagactgggatac---tcattt--------c-tcctgggtgggccccagtctgg-cagtgatgagttc---ttcct---gccaaggcc-accgctcatgtcaagtg---tctatcctgcagtgtcagctcccactgagatctgtggctatcactaccccttctggtcccatcC-GTTTCTCTCACCAATTTCCCTTAACTC----------TTTGTAAGTAGTTCCTTTATTTCTTTAGTTAATCCTTTTGTGACTTATACTTGTTTTCCTGCAG--AAACCCAGACCAATGTATAG-AAAAAGCAAATAATTTTGAATACAAAATTGTCTC--ACTAAAATTGGGGAAAAAGAAGTCAAGGGATGTTGAGTAGGAAG-TTAGCAAATAAGAAATCAGTTGGTTGATACAAAATTAAGAAAACTCCTGAA--TTGCATGAAAA--ATATG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 466822 477 - 2150887 CCTTTTGGCA--TCTGT------GGGCCA---GTGGGAAGAGCCAACAGG----GCACTgagagatattggaatca---ttatttccctggctc-tccctggtgggctgcggtcgggcaagtgatga---a---ttctttgagcaaaggcc-acgtctcatgccacatgg-ccttctcctatagctgcagctctcactgggata-gtggtaaactctctccc-cgtcacctcttttggc-tcccttattggttttccctggcccagcctatacttttccaaatag-tcccttcattccaacacttctcCTTTTATGTAAAATATGTG-TTTCCTACTGTAAA--ACACAACAGTATATAA-GAAAAGCAAATGGTCTTGATTACAGAATTTCTTATCAACAAAATTGGGGGAAAACAAGGGAATAGGCTTTGGTTAGGAAG-CTAGCAAATAGAAATTTATTTGATTATTATAAAAATGAAGCAGATTCTTGAATCTGCATGAAAAAAATACA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1252663 105 - 1406956 I a score=5058642.000000 s hg38.chr18_GL383571v1_alt 100272 522 + 198278 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTGCATGAAATGTCTTATGA-TTTTAAGGATTTAGATATAGAGGGCATACAAAAATGTATCATCATTGTGTTTATCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTCAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataactttttgaaaatataattcctaaactgagtgaaatgtcagaagtattct-----------gaaaaataatactaacgttca---aatgtttc-aaaacaataatcaggattttacatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaacgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacctaatcactaataaaccattt---aaaagaat-aattctgaaaaaagtaaaacataaccatgagcagaattt-aaaca---aaat----at----tctccaaaacactAC s panTro5.chr18 65004857 522 + 78221452 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTGCATGAAATGTCTTATGA-TTTTAAGGATTTAGATATAGAGGGCATACAAAAATGTATCATCATTGTGTTTATACCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTCAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataactttttgaaaatataattcctaaactgagtgaaatgtcaaaagtattct-----------gaaaaataatactaacgttca---aatgtttc-aaaacaataatcaggattttacatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaacgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------cgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacctaatcattaataaacaattt---aaaagaat-aattctgaaaaaagtaaaacataaccatgagcagaattt-aaaca---aaat----at----tctccaaaacactAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129116 522 + 77229886 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTGCATGAAATGTCTTATGA-TTTTAAGGATTTAGATATAGAGGGCATACAAAAATGTATCATCATTGTGTTTATCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTCAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataactttttgaaaatataattcctaaactgagtgaaatgtcaaaagtattct-----------gaaaaataatactaacattca---aatgtttc-aaaacaataatcaggattttacatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaacgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------cgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacctaatcattaataaacaattt---aaaagaat-aattctgaaaaaagtaaaacataaccatgagcagaattt-aaaca---aaat----at----tctccaaaacactAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5348945 522 + 17472758 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTGCATGAAATGTCTTATGA-TTTTAAGGATTTAGATATAGAGGGCATACAAAAATGAATCATCATTGTGTTTATCCGTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTCAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataattttttgaaaatataattcctaaactgagtgaaatgtcaaaagtattct-----------gaaaaataatactaaagttca---aatgtttc-aaaacaataatcaggattttacatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaacgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------cgcttcttattccaaattgcaaggac------tt-----aaaatttcattgttgaacctaatcattaataaacaattt---aaaagaat-aattctgaaaaaagtaaaacataaccatgagcagaattt-aaaca---aaat----at----tctccaaaacactAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389028 525 - 152096393 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTGCATGAAATGTCTTATGA-TTTTAAGGATTTAGATATAGAGGGCATACAAAAATGTATCATCATTGTGTTTATCCCTTTAAAAAA------TGTTT---TGCATAATCTTATCAAATTCAGGTATAGT-TAGTTtgaaattagttcaaatagatgtaattaaaaataacttttcgaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gaaaaataatactaatgttcaaataatgtttc-aaaacaataatcaggattttacatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaacgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacctaatcattaataaacaattt---aaaagaat-aattctgaaaaaagtaaaacataaccacgagcagaattt-aaaca---aaat----at----cctccaaaacactgC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57338435 529 + 70235451 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTACATGAAAGGTCTTATGA-TTTTAAGGATTTAGATAGAGAGAGGATACAAAAATGTATTATCATTGTGTTTGTCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTGAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gaaaaatcatactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcatcagaaattacagt---aagatggagaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacataatcattaataaacaattt-agaaaagaataaattctgaaaaaagtaaaacataaccacgagcagaatttaaaaca---aaat----at----cctccaatacactgc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63029820 529 - 75711847 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTACATGAAAGGTCTTATGA-TTTTAAGGATTTAGATAGAGAGAGGATACAAAAATGTATTATCATTGTGTTTGTCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTGAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gaaaaatcatactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcatcagaaattacagt---aagatggagaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacataatcattaataaacaattt-agaaaagaataaattctgaaaaaagtaaaacataaccacgagcagaatttaaaaca---aaat----at----cctccaatacactgc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13582595 529 - 18804593 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTACATGAAAGGTCTTATGA-TTTTAAGGATTTAGATAGAGAGAGGATACAAAAATGTATAATCATTGTGTTTGTCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTGAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gaaaaatcatactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcatcagaaattacagt---aagatggagaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacataatcattaataaacaattt-agaaaagaataaattctgaaaaaagtaaaacataaccacgagcagaatttaaaaca---aaat----at----cctccaatacactgc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13199317 529 + 18905526 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTACATGAAAGATCTTATGA-TTTTAAGGATTTAGATAGAGAGAGGATACAAAAATGTATCATCATTCTGTTTGTCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTGAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gagaaatcatactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcaacagaaattacagt---aagatgaagaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacataatcattaataaacaattt-agaaaagaataaattctgaaaaaagtaaaacataaccacgagcagaatttaaaaca---aaat----at----cctccaaaacactgc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60029247 528 - 72318688 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATATGAAGGTACATGAAAGGTCTTATGA-TTTTAAGGATTTAGATAGAGAGAGGATACAAAAATGTATCATCATTGTGTTTGTCCCTTT-AAAAA------TATTT---TGCATAATCTTATCAAATTGAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gaaaaatcatactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacgtaatcattaataaacaattt-agaaaagaataaattctgaaaaaagtaaaacataaccacgagcagaatttaaaaca---aaat----at----cctccaaaacactgc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 362866 525 - 1517660 ACCTAAGAAACACTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTACATGAAAGGTCTTATGA-TTTTAAGGATTTAGAT----AGAGGATACAAAAATGTATCATCATTGTGTTTGTCCCTTTAAAAAA------TATTT---TGCATAATCTTATCAAATTGAGGTATAGT-Tgctttgaaattagttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaatgaaatgtcaaaagtattct-----------gaaaaatcatactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcatcagaaattacagt---aagatggaaaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgcttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacataatcattaataaacaattt-agaaaagaataaattctgaaacaagtaaaacataaccacgagcagaatttaaaaca---aaat----at----cctccaaaacactgc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3462939 526 + 6513552 ACCTAAGAAACATTGTATAGAGCCAATAAACTGTTTCTATGTGAAGGTACATGAAAGGTCTTATGA-TTTTAAAGATTTAGATACAGAGAGGAAACAAAAATGTATCATCATTGTGTTTGTCCCTTTAAAAAA------TATTT---TGCATAATCTTATCGAATTGAGGTATAGT-TGCTTCgaaatttgttcaaatagatgtaattaaaaataacttctcaaaaatataattcctaaactgaaggaaatgtcaaaagtattct-----------gaaaaatcgtactaatgttcaaataatgtttc-aaaacaatgatcaggattttgcatcagaaattatagt---aagatggagaaataa----gagaaagatcacttttgaagaatgtttcacaagggaagtatt-------tgcta-----------------------------------------------------------tgtttcttattccaaattgcaaggac------tt-----aaaatttcattcttgaacataatcattaataaacaattt-agaaaagaat-aattctgaaaaaagcaaaac--aacaacaaacagaatttaaaaca---aaat----gt----cctccaaaacactgc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105232482 444 + 117903854 GCCTAAGAAAAAGTTTACAGAGCCAATAAACTATTTCTGTGTGAAGGTGAAAGAAACATCTTATGA-TTTTAAGGATTTAGATATAGAATGGATCAAAAAATGTATCATTGTTGGGTTTGTCCCTTTAAAAAA----TCTATTT---TGGATAATCTCATCAAATTGAGGTATAGC-TGCTTTGAAATTAGTTCAAATAAC--TAATTTAAAATAACTTTTGGAAAGTATAATTCCTAAACTGAATAAAATGTCAAAAGTATTCT-----------GAAAAATCATACTAATGTTCAAACAATGTTTC-AAAAC---AATCAGGATTTTACATCAGAAATTACAGT---AAGATGG--------------------------------------------------------------GCTA-----------------------------------------------------------TACTTCTTATTCCAAATTGCAAGGAC------TT-----AAAATCTCATTCTTGAACCTAATCAT--------------------------------AAAAAAGTAAAAGATAACCACAAGTAGAATTTAAAACA---AAAC----AT----CCTCCAAAACACTAC i calJac3.chr13 C 0 I 8 s saiBol1.JH378121 19425549 439 - 31320352 GCCTAAGAAAAAGTTTATAGAGCCAATAAACTATTTCTATGTGAAGGCACAAGAAACATCTTATGA-TTTTAAGGATTTACATCTAGAATGGGTCGAAAACGGTATCGTTGTC---CTTGTCCCTTTAAAAAA----TCTATTT---TGGATAATCTTATCAAACTGAGGTATAGC-TGCTTTGAAATTAGTTCAAATAAATGTAATTTAAAATAACTCTTGGAAAGTATAATTCCTAAACTGAATAAAATGTCAAAAGTATTCT-----------GAAAAATCATGCTGATGTTCAAACAATGTTTC-AAAACAATAATCAGGATTTTACATCAGAAATTACAGT---AAGATGG--------------------------------------------------------------GCTA------------------------------------------------------------ACTTCTTATTCCAAATTGCAAGGAC------TT-----AAAATCTCATTCTTGAACTTAATCAT--------------------------------AAAAAAGTA------AACCACAAGTAGAATTTAAAACA---AAAC----AT----CCTCCAAAACACTGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1620924 448 + 2203405 GCCTAAATAAAAGTTTATAGAGCCAATAAACTATTTCTATGTGAAGGTGCAAGAAACATCTCATGA-TTTTAAGGATTCAGATATAGAATGGATCAAAAA-TGTATCATCATTGTGTTTGCCCCTTTAAAAAA----TCTATTT---TAGATAATCTTATCAAATTGAGGTACAGC-TGCTTTGAAATTAGTTCAAATAAATGTAATTTAAAATAACTTTTGGAAAGTATAATTCCTAAACTGAATAAAATGTCAAAAGTATTCC-----------GACAAATCATATTAACGTTCAAACAATGTTTC-AAAACAATAATCAGGATTTTACAGCAGAAATTACAGT---AAGATGG--------------------------------------------------------------CCTA-----------------------------------------------------------TATTTCTTATTCCAAATTGCAAGGAC------TT-----AAAATCTCATTCTTGAACCTAATCAT--------------------------------AAAAAAGTATAAGATAACCCCAAGTAGAATTTAAAACA---AAAC----AT----CCTCCAAAACACTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573064 450 - 14941987 GCCTAAGAAAAAGTTTATAGAACCAATAAACTATTTCTATGTGAAGGTGCAAGAAACATCTTATGATTTTTAAGGATTTAGATATAGAATGGATCAAAAAATGTATCATCGTTGTGCTTGTCCCTTTAAAAAA----TCTATTT---TGGGTAATCTTATCAAATTGAGGTATAGC-TGCTTTGAAATTAGTTCAAATAAATGTAATTTAAAATAACTTTTGGAAAGTATAATTCCTAAACTGAATAAAATGTCAAAAGGATTCT-----------GAAAAATCATACTAACATTCAAACAATGTTTC-AAAACAATAATCAGGATTTTACATCAGAAATTACAGT---AAGATGG--------------------------------------------------------------GCTA-----------------------------------------------------------TACTTCTTATTCCAAATTGCAAGGAC------TT-----AAAATCTCATTCTTGAACCTAATCAA--------------------------------AAAAAAGTAAAAGATAACCACAAGTGGAATTTAAAACA---AAAC----AT----TCTCCAAAACACTGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217141 481 - 20685099 AACTAAGAAAAATTTTAAACAGGCAATAAATTATCCTTATATGAAGA---ATGATAGGTTTTATGG-TTTTAAGAATTTTCATATAAAAAGGATAAGAAAATATAACATCAATGAGTTCATCCTTTAAAAAAAAAAAACTACTT---GGCATAGTCTTATCAA---TAGACATAG---GCCTTGCCATCAGCTTAAATAGAAGTAATTAAAAATAACT-ATAGGAAATTTAATTTCTAAACTA--------GTCAAGAATATTCT-----------AGAAAAGCAAGTTTTTGTTCAAATAATATTTC-AAAACAGTAATTGGCATTTCAAATCTGAAATTATAAT---AAAATGGAGAAATGA----GAGGAAGATTACTTTTGAAG------------------------------------------------------------------------------------------------------------ATAGCAGGAAC------TTATTTCAAAATCTCGCTGTTACATCTAATCACTAAACAATAATTTTAAGaaagaat-aactttgaaa-gagcaaaaggtaaccacaagtggaattt-aaaca---aaatatacat----cttctaaaaccct-- i otoGar3.GL873546 I 299 C 0 s canFam3.chr1 112288773 524 - 122678785 ACCTAAGAAAAGTTTTAAGCAGCCAATAGATTATTCTTATGTGAAAGTGAATGATGGGTTTTGTGATTTTTAAGGATTTAGACATAAGAGGGATCACAAAACACACCGTTGATGTTTTCATCC-TTTAAAAAA------TACTTAAAAGTATGTTCTTATCAAATGGACATATGGTGGGCTTTGAAATCAATTAAAATAGGTGTGATTGAAAACAGCTCCAGGAAAATAGGATTTCTAAACATCATAAAGTGTCATT-TTTTTCT-----------GTAAAAATACA-TACTGTTCAAATAATAATTCAAAAACAATAATCAAGATTTCATATTTGAAATTATGGTGACAGGATGGAGAAATGA----GAGGAATGTTGCTTTTGAAGAATTTTTTAGAAGTTAAGT-----------ACTA-----------------------------------------------------------CACTGTTTATCACAGATGGCTGGA---------------ATAatctcacttttgaagcagataattgataaataataa---aaaagaat-cactttgaaa-acgtaaaagacaaccac-agtagaatttgaaaca---gaat----atataccctctgaaacact-- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 467299 484 - 2150887 GCCTAAG------------------------------------------------------------TT-----------------------------------------------------------AAAGA------TTATT---CGC--------ATCAAATGGATATATAGTGAACTTTGAAATCAGTTAAAATAAGTATAATTTAAAATAACCTTAGGAAA--ATAATTCTTAAACTCAGT---ATGACATCTGTATTTTCCCTGAAGGAAAAAAAAGTATACAATTGTTCAAGTAGTATTTC-AAAACAATAATCTGGATTTCAAAACTGACATTATAATAATAAGATGGAGAATCGAAATTGGGGTAGATAAGCTGGGAAGAAGGTTTCACATGGTAAATATTTCCATACTGCTTGTCACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTGCTTGTCACaaatagcaaggacacaaagtt-----ataatctcactcttgaatctgatcattaataaatcataa----aaggaat-atctttgaaatttataaaagacaatcactagtataattagaaaaatatacac----at----tctccaaaaca---- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1252663 105 - 1406956 I a score=420192.000000 s hg38.chr18_GL383571v1_alt 100794 49 + 198278 CGGGGTTTTGTC---AGGGAGGGGGAGAGGC------A-GGAAACAAAGTATTCACATC s panTro5.chr18 65005379 49 + 78221452 CGGGGTTTTGTC---AGGGAAGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129638 49 + 77229886 CGGGGTTTTGTC---AGGGAGGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349467 49 + 17472758 CGGGGTTTTGTC---AGGGAGGTGGAGAGGC------A-GGAAACAAAGTATTCACATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389553 49 - 152096393 CGGGGTTTTGTC---AGGGAGGGGGAGAGGC------A-GGAAACAAAGTGTTCACATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57338964 49 + 70235451 agGGGTTTTGTT---GGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030349 49 - 75711847 agGGGTTTTGTT---AGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583124 49 - 18804593 agGGGTTTTGTT---AGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13199846 49 + 18905526 agGGGTTTTGTT---GGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60029775 49 - 72318688 agGGGTTTTGTT---GGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363391 49 - 1517660 agGGGTTTTGTT---GGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463465 49 + 6513552 agGGGTTTTGTT---GGGGATGGGGAGAGGC------A-GGAAACAAAGTATTCACATC i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19425988 52 - 31320352 CAGGGTTTTGTCCAAGAGGATGGGGAGAGGC------A-GGAAACAAAATATGCACATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621372 51 + 2203405 -CAGGTTTTGTCCAGGATGATGGGAAGAGGC------A-GGAAACAAAATATGCACATC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573514 52 - 14941987 CAGGGTTTTGTCCAGGACGATGGGGACAGGC------A-GGAAACAAAATATGCACATC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217622 38 - 20685099 --------------------tggagggagtcaaataaa-ggaaacaaagtatatacaaa i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289297 38 - 122678785 ---------------gaggacacaaaatgta------atggaaagaaagtgtctacatc i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 467783 41 - 2150887 ----------tt---gggggggggggaaggc----aaa-agaagcaaagtaagtacctc i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1252663 105 - 1406956 I e calJac3.chr13 105232926 8 + 117903854 I a score=976042.000000 s hg38.chr18_GL383571v1_alt 100843 83 + 198278 AAAGGACAAAAGCAAAGGAAACAT----GAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGTTATAACAACAATTGCAAA s panTro5.chr18 65005428 83 + 78221452 AAAGGACAAAAGCAAAGGAAACAT----GAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGTTATAACAACAATTGCAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129687 83 + 77229886 AAAGGACAAAAGCAAAGGAAACAT----GAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGTTATAACAACAATTGCAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349516 83 + 17472758 AAAGGACAAAAGCAAAGGAAACAT----GAACAAATCATAGGGAACAAAACAGAGACAAATGTTGAGGTTATAACAACAATTGGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389602 83 - 152096393 AAAGGACAAAAACAAAGGAAACAT----GAACGAATCATAGGGGACAAAACAGAGACAAATGTTGAGGTTATAAAAACAATTGCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339013 83 + 70235451 AGAGGACAAAAACAAAGGAAACGT----AAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGCTATAACAACAATTGCAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030398 83 - 75711847 AAAGGACAAAAACAAAGGAAACGT----AAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGCTATAACAACAATTGCAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583173 83 - 18804593 AAAGGACAAAAACAAAGGAAACGT----AAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGCTATAACAACAATTGCAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13199895 83 + 18905526 AAAGGACAAAAACAAAGGAAACGT----AAACAAATCATAGGGGACAAAACAGAGACAACTGTTGAGGCTATAACAACAATTGCAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60029824 83 - 72318688 AAAGGACAAAAACAAAGGAAACGT----AAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGCTATAACAACAATTGCAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363440 83 - 1517660 AAAGGACAAAAACAAAGGAAACGT----AAACAAATCATAGGGGACAAAACAGAGACAAATGTTGAGGCTATAACAACAATTGCAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463514 83 + 6513552 AAAGGACAAAAACAAAGGAAACAT----AAACAAATCACAGGGGACAAAACAGAGACAAATGTTGAGGCTATAACAACAACTGCAAA i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19426040 80 - 31320352 AAAGGAC-AAAACAAAGCAAATAC----TAACAAATCACAGGGGACAAAAC--AGACAAATGTTCAGGTTATAACAACAATTGCACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621423 78 + 2203405 AAAGGACAAAAACAAAGGAAATAC----AAACAAATCATAGGGGACAAAAC--AGACAAATGTTCAGGTTGTAACAACAATTGC--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573566 81 - 14941987 AAAGGACAAAAACAAAGGAAATAC----AAACAAATCATAGGGGACAAAAC--AGACAAATGTTCAGGTCATAACAACAATTGCAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1252768 87 - 1406956 AAAGGACAAAAACAAAAGAAACATAATGAAACAAATCATAGGTGACAGAACTGAGCCAAATATTCAAGTTATAACAACAATTGTAAA i proCoq1.NW_012148742v1 I 105 I 162 s otoGar3.GL873546 11217660 86 - 20685099 aaaagacaaaaatagaagaaacataaagaaagaaatcataggtgacagaattgtgccaaatatccaagttataacaacaa-cataaa i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289335 87 - 122678785 aaaggacaaaaccgtaggaaacataaagaaagaaactgtaggttacaaacctgtgacaaatagtccagttataaccatggttgtaaa i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 467824 87 - 2150887 aaaggacaaaaacaaaggaagcataaagaaagaaatcacaggtgacagaactaagccaaatattcaagttgtaataacaatcgtgaa i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105232926 8 + 117903854 I a score=854092.000000 s hg38.chr18_GL383571v1_alt 100926 101 + 198278 TAAAATTTTAAAACTCCTAATCAAACAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA---------------TGTAACCTCTAACAGTCATG-----CCCTATAC s panTro5.chr18 65005511 101 + 78221452 TAAAATTTTAAAACTCCTAATCAAACAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA---------------TGTAACCTCTAACAGTCAAG-----CCCTATAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129770 101 + 77229886 TAAAATTTTAAAACTTCTAATCAAACAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA---------------TGTAACCTCTAACAGTCAAG-----CCCTATAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349599 104 + 17472758 TAAAATTTTAAAACTCCTAATCAAACAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CTTGTAACCTCTAACAGTCATG-----CCCTATAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389685 104 - 152096393 TAAAATTTTAAAACTCCTAATCAAACAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CACGTAACCTCTAACAGTCATG-----CCCTATAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339096 104 + 70235451 TAAAATTTTAAAACTGCTAATCAAATAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CACATAACCTCTAACAGTCATG-----CCCTATAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030481 104 - 75711847 TAAAATTTTAAAACTGCTAATCAAATAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CACATAACCTCTAACAGTCATG-----CCCTATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583256 104 - 18804593 TAAAATTTTAAAACTGCTAATCAAATAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CACATAACCTCTAACAGTCATG-----CCCTATAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13199978 104 + 18905526 TAAAATTTTAAAACTGCTAATCAAATAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CACATAACCTCTAACAGTCATG-----CCCTATAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60029907 104 - 72318688 TAAAATTTTAAAGCTCCTAATCAAATAACAAACAAG-AAAC-CAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CATATAACCTCTAACAGTCATG-----CCCTATAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363523 104 - 1517660 TAAAATTTTAAAACTGCTAATCAAATAACAAACAAG-AAAC-CAGAGACTGTTGA--CTGATGGGGTCAGGC--AATCA--------T----CACATAACCTCTAACAGTCATG-----CCCTATAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463597 105 + 6513552 TAAAATTTTAAAACTCCTAATCAAATAACAAACAAG-AAACAAAGAGACTCTTGA--CTGATGGGGTCAGGC--AATCA--------T----CATATAACCTCTAACAGTCATG-----CCCTATAC i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19426120 96 - 31320352 TAAAATTTTAAAA---CTAATCAAACAACAAACAAG-AAAT-AAGAGACTCTTGA--CTGATGGGGTCAAAT--AATCA--------T----CATGCAACCTCTAAAAGTCA----------TATAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621501 85 + 2203405 -----------AA---AGAATCAAACAACAAACAAG-AGAT-AAGAGACTCTTGA--CTGATGGTGTCAGAC--AATCA--------T----CATGCAACCTCTAAAAGTCA----------TATAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573647 96 - 14941987 TAAAATTTCAAAA---CTAATCAAACAACAAACAAG-AGAT-AAGAGACTCTTGA--CTAATGGGGTCAGAC--AATCA--------T----CATGCAACCTCTAAAAGTCA----------TATAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217746 107 - 20685099 -cagaataaaaacctcctaattgaacaataaaCAAGCAAAC-AATAGACTC-TGA--CTGACGGGGCCAAAC--AAACAATCCTAGCC----CAGGCAACC----GAAGTCATG-----CCTTAAAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289422 94 - 122678785 taaaat---aaaccatctaatcaaacaacagg-gac-AAAC-AAGAAACTC-TGACCCTGATGGGGTCAAACCAAATCC--------T----CAT--------------TCATGAGACTCCTTAAAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 467911 102 - 2150887 taagaa---aaacctcctaatcaaaaaaacaaaaaa-acct-ctgagTCTTATGA-----AGTGAAATGGAA--AATCC--------TAGAACATGGAACTCCCAAGAGACAAA-----CCTTCTGC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1252855 162 - 1406956 I e calJac3.chr13 105232926 8 + 117903854 I a score=323900.000000 s hg38.chr18_GL383571v1_alt 101027 31 + 198278 AAACTTACTACAAAT---AA-----TATAGGTAACATTA s panTro5.chr18 65005612 31 + 78221452 AAACTTACTACAGAT---AA-----TATAGGTAACATTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129871 31 + 77229886 AAACTTACTACAAAT---AA-----TATAGGTAACATTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349703 31 + 17472758 AAACTTACTACAAAT---AA-----TATAGGTAACATTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389789 31 - 152096393 AAATTTACTACAAAT---AA-----TATAGGTAACATTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339200 31 + 70235451 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030585 31 - 75711847 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583360 31 - 18804593 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200082 31 + 18905526 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030011 31 - 72318688 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363627 31 - 1517660 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463702 36 + 6513552 AAACTTACTATAAAA---AAATACCTCTAGGTAACATTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105232934 31 + 117903854 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i calJac3.chr13 I 8 C 0 s saiBol1.JH378121 19426216 31 - 31320352 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621586 31 + 2203405 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573743 31 - 14941987 AAACTTACTATAAAT---AA-----TAGAGGTAACATTA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217853 33 - 20685099 AAAGTGATTATAAACACAAA-----CAGAAGGAA-ATTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289516 31 - 122678785 CAAGTGACACTAAGA---TG-----CAGAAGGAACATCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 468013 27 - 2150887 AAAGTGAC----ACT---AT-----GATGGTCAACAtca i dasNov3.JH575754 C 0 I 467 e proCoq1.NW_012148742v1 1252855 162 - 1406956 I a score=40863.000000 s hg38.chr18_GL383571v1_alt 101058 5 + 198278 TAGGC--------------- s panTro5.chr18 65005643 5 + 78221452 CAGGC--------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129902 5 + 77229886 CAGGC--------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349734 5 + 17472758 TAGGC--------------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389820 5 - 152096393 TAGGC--------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339231 5 + 70235451 TAGAT--------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030616 5 - 75711847 TAGGT--------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583391 5 - 18804593 CAGGT--------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200113 5 + 18905526 TAGGT--------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030042 5 - 72318688 TAGGT--------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363658 5 - 1517660 TAGGT--------------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463738 5 + 6513552 TAGGT--------------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105232965 5 + 117903854 TAGGC--------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426247 5 - 31320352 TAGGC--------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621617 5 + 2203405 CAGGC--------------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573774 5 - 14941987 TAGGC--------------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253017 5 - 1406956 TAGGC--------------- i proCoq1.NW_012148742v1 I 162 C 0 s otoGar3.GL873546 11217886 5 - 20685099 GGGGC--------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289547 20 - 122678785 TAGGCAAATCATATCAGGTA i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 468040 467 - 2150887 I a score=895989.000000 s hg38.chr18_GL383571v1_alt 101063 63 + 198278 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT s panTro5.chr18 65005648 63 + 78221452 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129907 63 + 77229886 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349739 63 + 17472758 AATGTAAATACAGTTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389825 63 - 152096393 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339236 63 + 70235451 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030621 63 - 75711847 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583396 63 - 18804593 AAAGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200118 63 + 18905526 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030047 63 - 72318688 AACGTAAATACAATTCAAGGCGAAAGTCATTAAGTGGTACAA---TATTAATCATGCTACGTAAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363663 63 - 1517660 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463743 63 + 6513552 AATGTAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAATCATGCTACATAAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105232970 63 + 117903854 AATGTAAATACAATTCAAGGCAAAAATCATTAGGTGGTACAA---TATTAGTCATGTTACATAAGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426252 63 - 31320352 AATGTAAACATGATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAGTCATGTTACATAAGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621622 63 + 2203405 AATGTAAATATAATTCAAGGCAAAAATCATTAAGTGATACAA---TATTAGTCATGTTACATAAGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573779 63 - 14941987 AACATAAATACAATTCAAGGCAAAAATCATTAAGTGGTACAA---TATTAGTCATGTTACATAAGT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253022 63 - 1406956 AATGTAAATACAACTCAAGGAAAAAATAATTAATTGATAAAA---AATTAATCATTTTACATAAGT i proCoq1.NW_012148742v1 C 0 I 6 s otoGar3.GL873546 11217891 63 - 20685099 AGCGTAAACACAATTCAAAGCAAAAATCAGTCATTGGCACAA---AATTAATCATTGCACATAAGT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289567 66 - 122678785 AATGCAAATAAAGTTCAAGGAAGAAATCATTACATGTTAAAAAATAATTAGCCATTCCCAAGAAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 468507 61 - 2150887 AATGCAAATA-AATTCAAGGT-AAACTCATTAAGTGGCACAA---AAGTAGTCATTTTACATGAGT i dasNov3.JH575754 I 467 C 0 a score=15561.000000 s hg38.chr18_GL383571v1_alt 101126 1 + 198278 A s panTro5.chr18 65005711 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129970 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349802 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389888 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339299 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030684 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583459 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200181 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030110 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363726 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463806 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233033 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426315 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621685 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573842 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217954 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289633 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 468568 1 - 2150887 A i dasNov3.JH575754 C 0 I 2 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I a score=15300.000000 s hg38.chr18_GL383571v1_alt 101127 1 + 198278 G s panTro5.chr18 65005712 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129971 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349803 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389889 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339300 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030685 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583460 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200182 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030111 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363727 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463807 1 + 6513552 G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233034 1 + 117903854 G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426316 1 - 31320352 G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621686 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573843 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217955 1 - 20685099 G i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112289634 1 - 122678785 G i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e dasNov3.JH575754 468569 2 - 2150887 I a score=56970.000000 s hg38.chr18_GL383571v1_alt 101128 6 + 198278 TAATGT s panTro5.chr18 65005713 6 + 78221452 TAATGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129972 6 + 77229886 TAATGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349804 6 + 17472758 TAATGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389890 6 - 152096393 TAATGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339301 6 + 70235451 TAATGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030686 6 - 75711847 TAATGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583461 6 - 18804593 TAATGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200183 6 + 18905526 TAATGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030112 6 - 72318688 TAATGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363728 6 - 1517660 TAATGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463808 6 + 6513552 TAATGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233035 6 + 117903854 TAAtgt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426317 6 - 31320352 AATAgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621687 6 + 2203405 TAAtgt i cebCap1.NW_016107689v1 C 0 I 92 s aotNan1.NW_018502140v1 3573844 6 - 14941987 TAAtgt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e dasNov3.JH575754 468569 2 - 2150887 I e canFam3.chr1 112289635 0 - 122678785 C e otoGar3.GL873546 11217956 0 - 20685099 C a score=842334.000000 s hg38.chr18_GL383571v1_alt 101134 109 + 198278 AATCAgaaaggggttccgatccggacaccaaaaga-gggttcttggatattgggcaagaaacaaattgaggcaagtacacagagtaaagtgaaagcaagtttattgagaa s panTro5.chr18 65005719 109 + 78221452 AATCAgaaaggggttccgatccggacaccaaaaga-gggttcttggatattgggcaagaaaaaaattgaggcaagtacacagagtaaagtgaaagcaagtttattgagaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64129978 109 + 77229886 AATCAgaaaggggttccgatccggacaccaaaaga-gggttcttggatattgggcaagaaaaaaattgaggcaagtacacagagtaaagtgaaagcaagtttattgagaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349810 109 + 17472758 AATCAgaaaggggttccgatctggacaccaaaaga-gggttcttggatattgggcaagaaacaaattgaggcaagtacacagagtaaagtgaaagcaagtttattgagaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139389896 109 - 152096393 AATCAgaaaggggttccgatcaggacaccaagaga-gggttcttggatattgggcaagaaacaaattgaggcaagtgcatacagtaaagtgaaagcaagtttattgagaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339307 109 + 70235451 AATCAgaaaggggttccgatccggacaccaagaga-aggttcttggattttgggcaagaaacaaattgaggcaagtacatagagtaaagtgaaagcaagtttattgagaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030692 109 - 75711847 AATCAgaaaggggttccaatccggacaccaagaga-aggttcttggattttgggcaagaaacaaattgaggcaagtacatagagtaaagtgaaagcaagtttattgagaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583467 109 - 18804593 AATCAgaaaggggttccaatccggacaccaagaga-aggttcttggattttgggcaagaaacaaattgaggcaagtacatagagtaaagtgaaagcaagtttattgagaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200189 110 + 18905526 AATCAgaaaggggttccgatccggacaccaagagaggggttcttggatcttgggcaagaaacaaattgaggcaagtacgtagagtaaagtgaaagcaagtttattgagaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030118 109 - 72318688 AATCAAaaaggggttccgatccggacaccaagaga-gggttcttggatcttgggcaagaaacaaattgaggcaagtacatagagtaaagtgaaagcaagtttattgagaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363734 109 - 1517660 AATCAgaaaggggttctgatccggacaccaagaga-gggttcttggatcttgggcaagaaacaaattgaggcaagtacatagagtaaagtgaaagcaagtttattgagaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463814 109 + 6513552 AATCAgaaaggggttccgatccggacaccaagaga-gggttcttggatcttgggcaagaaacaaattgaggcaagtacatagagtaaagtgaaagcaagtttattgagaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233041 92 + 117903854 gacaggaaaggggtc------------tcaagaga-gggttcttgaatcttgggcaagaaacaagttgaggagagtaca-----taacgggaaagcaaacttattaagaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426323 92 - 31320352 gatgggaaaggggtc------------ccaagaga-ggtttcttgaatcttgggtaagaaacaagttgagaggagtaca-----taaattgaaagcaaatttattaaaaa i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3573850 92 - 14941987 gacgggaaaggggtc------------ccaagaga-gggttcttgaatcttgggcaagaaacaagttgaggggagtaca-----taaagtgaaagcaaatttattaagaa i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e dasNov3.JH575754 468569 2 - 2150887 I e canFam3.chr1 112289635 0 - 122678785 C e otoGar3.GL873546 11217956 0 - 20685099 C e cebCap1.NW_016107689v1 1621693 92 + 2203405 I a score=486.000000 s hg38.chr18_GL383571v1_alt 101243 1 + 198278 -a s panTro5.chr18 65005828 1 + 78221452 -a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64130087 1 + 77229886 -a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349919 1 + 17472758 -a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390005 1 - 152096393 -a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339416 1 + 70235451 -a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030801 1 - 75711847 -a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583576 1 - 18804593 -a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200299 1 + 18905526 -a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030227 1 - 72318688 -a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363843 1 - 1517660 -a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463923 1 + 6513552 -a i colAng1.NW_012115433v1 C 0 C 0 s aotNan1.NW_018502140v1 3573942 1 - 14941987 t- i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e calJac3.chr13 105233133 0 + 117903854 C e dasNov3.JH575754 468569 2 - 2150887 I e canFam3.chr1 112289635 0 - 122678785 C e otoGar3.GL873546 11217956 0 - 20685099 C e cebCap1.NW_016107689v1 1621693 92 + 2203405 I e saiBol1.JH378121 19426415 0 - 31320352 C a score=2635737.000000 s hg38.chr18_GL383571v1_alt 101244 468 + 198278 gtaaatgtctcatgtgtctccacgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcatctgggtgcaggcgggctgagtccgaaaa--gagtcagcaaagggtggtgggatcaacattagttcttacaggttttgcgataggcagtggagttaggagcagtgttttg-ggggcagggggtggatctcagaaagtacattctcaagggtggggagaattacaaagaaccttcttaagggtgggggagattataaagaaccttcttaagtgtgggggatattacaaagtacattgatcagttagggtgggccaga--------aacaaatcacaatggtggaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatgcgtgcaattcactggggatatgatggcttagcctgggcccagaggcctgac s panTro5.chr18 65005829 468 + 78221452 gtaaatgtctcatgtgtctccacgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgtgtgcaggcgggctgagtctgaaaa--gagtcatcaaaaggtggtgggatcaacattagttcttacaggttttgcgatgggcagtagagttaggagcagtgttttg-ggggcagggggtggatctcagaaagtacattctcaagggtggggagaattacaaagaaccttcttaagggtgggggagattataaagaaccttcttaagtgtgggggatattacaaagtacattgatcagttagggtgggccaga--------aacaaatcacaatggtggaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatgcgtgcaattcactcgggatatgatggcttagcctgggctcagaggcctgac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64130088 468 + 77229886 gtaaatgtctcatgtgtctccacgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccgaaaa--gagtcagcaaagggtcgtgggatcaacattagttcttacaggttttgcgatgggcagtggagttaggagcagtgttttg-ggggcagggggtggatctcagaaagtacattctcaagggtggggagaattacaaagaaccttcttaagggtggaggagattataaagaaccttcttaagtgtgggggatattacaaagtacattgatcagttagggtgggccaga--------aacaaatcacaatggtggaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatgcgtgcaattcactggggatatgatggcttagcctgggctcagaggcctgac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5349920 468 + 17472758 ataaatgtctcatgtgtctccacgtgaagagaccaccaaacaggctttgtatgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccgaaaa--gagtcagcaaagggtggtgggatcaacattagttcttacaggttttgcgataggcagtggagttaggagcagtgttttg-ggggcagggggtggatctcagaaagtacattctcaagggtggggagaattacaaagaaccttcttaagggtgggggagattataaagaaccttcttaagtgtgggggatattacaaagtacattgatcagttagggtgggccaga--------aacaaatcacaatggtggaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatgcgtgcaattcactggggatatgatggcttagcctgggctcagaggcctgac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390006 468 - 152096393 gtaaatgtctcacgtgtctccgtgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtctgaaaa--gagtcagcaaagggtggtaggattgtcattagttcttctaggttttgggataggtggtggacttaggagaaatgttttg-ggggcagggagtggatatcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaagagtgggggagattataaagaaacttcttacgtgtgggggatattacaaagtacattgatcagttagggtgggccaga--------aacaaatcacaatggtgaaatgtcatcagttaaggctatttccacttcttttgtggatcttcagttgcttcaggccatctggatgtatgcgtgcaggtcactggggatgtgatggcttagcttgggcactgaggcctgac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339417 470 + 70235451 gtaaatgtctcacgcgtctccatgtgaagagaccacgaaacaggctttgtgtgagcaacatggctgtttatttcacctgggcgcaggcgggctgagtccgaaaaaggggtcagcaaaaggtggtgggattatcattagttcttataggttttgggataggcggtagagttaagagcagtgttttc-ggggcagggggtggatctcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaagagttggggagattataaagaaccttcttaagggtggggaatattacaaagtacattgatcagttagggtggggcaga--------aacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatatgtgcaggtcactggggatacaatggcttagcttgggcccacaggcctgac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63030802 470 - 75711847 gtaaatgtctcacgcgtctccatgtgaagagaccacgaaacaggctttgtgtgagcaacatggctgtttatttcacctgggcgcaggcgggctgagtccgaaaaaggggtcagcaaaaggtggtgggattatcattagttcttataggttttgggataggcggtagagttaagagcagtgttttc-ggggcagggggtggatctcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaagagttggggagattataaagaaccttcttaagggtggggaatattacaaagtacattgatcagttagggtggggcaga--------aacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatatgtgcaggtaactggggatgcaatggcttagcttgggcccacaggcctgac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13583577 470 - 18804593 gtaaatgtctcacgcgtctccatgtgaagagaccacgaaacaggctttgtgtgagcaacatggctgtttatttcacctgggcgcaggcgggctgagtccgaaaaaggggtcagcaaaaggtggtgggattatcattagttcttataggttttgggataggcggtagagttaagagcagtgttttc-ggggcagggggtggatctcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaagagttggggagattataaagaaccttcttaagggtggggaatattacaaagtacattgatcagttagggtggggcaga--------aacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatatgtgcaggtaactggggatacaatggcttagcttgggcccacaggcctgac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200300 479 + 18905526 gtaaatgtctcacgtgtctccatgtgaagagaccacgaaacaggctttgtgtgagcaacatggctgtttatttcacctgggcgcaggcgggctgagtccgaaaaaggggtcagcaaagggtggtgggattatcattagttcttataggttttgggataggcggtggagttaggagcagtgttttcgggggcagggggtggatctcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaagggttggggagattataaagaaccttcttaagggtggggaatattacaaagtacattgatcagttagggtggggcagaaacaaatcaacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatatgtgcaggtcattggggatacaatggcttagcttgggcccacaggcctgac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030228 469 - 72318688 gtaaatgtctcacgtgtctccatgtgaagagaccacgaaacaggctttgtgtgagcaacatggctgtttatttcacctgg--gcaggcgggctgagtccaaaaaaggagtcagcaaagggtggtgggattatcattagttcttacaggttttgggataggcggtagagttaagagcagtgttttggggggcagggggtggatctcacaaagtacattctcaagggtggggaggattacaaagaaccttcttaagggttggggagattataaagaaccttcttaagggtggggaatattacaaagtacattgatcagttagggtggggcaga--------aacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatatgtgcaggtcactggggatacaatggcttagcttgggcccacaggcgtgac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 363844 471 - 1517660 gtaaatgtctcacgtgtctccatgtgaagagaccacgaaacaggctttgtgtgagcaacatggctgtttatttcacctgggcgcaggcgggctgagtccgaaaaaggggtcagcaaagggtggtgggattatcattagttcttataggttttgggataggcggtagagttaagagcagtgtgttcgggggcagggggtggatctcacaaagtatattctcaagggtggggagaattacaaagaaccttcttaagggttggggagattataaagaaccttcttaagagtggggaatattacaaagtacattgatcagttagggtggggcaga--------aacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatatgtgcaggtcattggggatacagtggcttagcttgggcccacaggcctgac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3463924 469 + 6513552 gtaaatgtctcacgtgtctccatgtgaagagaccacgaaacaggctttgcatgagcaacatggctgtttatttcacctgg--gcaggcgggctgagtccgaaaaaggagtcagcaaagggtggtgggattatcattagttcttataggttttgggataggcggtggagttaagagcagtgttttggggggcagggggtggatctcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaaggcttggggagattataaagaaccttcttaagggtggcggagattacaaagtacattgatcagttagggtggggcaga--------aacaaatcacaatgaggaaatgtcatcagttaaggctattttcacttcttttgtggatcttcagttgcttcaggccatctggatgtatacgtgcaggtcactggggatacaatggcttagcttgggcccacaggcctgac i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e calJac3.chr13 105233133 0 + 117903854 C e dasNov3.JH575754 468569 2 - 2150887 I e canFam3.chr1 112289635 0 - 122678785 C e otoGar3.GL873546 11217956 0 - 20685099 C e aotNan1.NW_018502140v1 3573943 0 - 14941987 C e cebCap1.NW_016107689v1 1621693 92 + 2203405 I e saiBol1.JH378121 19426415 0 - 31320352 C a score=9555.000000 s hg38.chr18_GL383571v1_alt 101712 1 + 198278 a s panTro5.chr18 65006297 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64130556 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350388 1 + 17472758 a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390474 1 - 152096393 a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339887 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031272 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584047 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200779 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030697 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364315 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464393 1 + 6513552 a i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233133 1 + 117903854 a i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426415 1 - 31320352 a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621785 1 + 2203405 a i cebCap1.NW_016107689v1 I 92 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e dasNov3.JH575754 468569 2 - 2150887 I e canFam3.chr1 112289635 0 - 122678785 C e otoGar3.GL873546 11217956 0 - 20685099 C e aotNan1.NW_018502140v1 3573943 0 - 14941987 C a score=3921425.000000 s hg38.chr18_GL383571v1_alt 101713 442 + 198278 gtaaagaaataaagaatggctactccataggaaaagcagccccgagggctgctggttgctcatttttatggttatttcttgatgatatgctaaac-aggggtggattattcatgcctcccccttttagaccacacagggtaacttcctaacattgccatggcatctgtaaactgtcacggtcctggtaggagtgtagcagtgaggacgatgagaga------tcactctcgttgccatcttggtattggtgggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgtgctgacctcctgtctcat------------------------------------------tctgagac--agactgcctaaccttctgggaatacagccaagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctctggttcaaacgcctctaacaG-T s panTro5.chr18 65006298 442 + 78221452 gtaaagaaataaagaatggctactccatagaaagagcagccccgagggctgctggttgcccatttttatggttatttcttgatgatatgataaac-aggggtggattattcatgcctcccccttttagactacacagggtaacttcctaacattgccatggcatctgtaaactgtcacggtcctggtaggagtgtagcagtgaggacgatgagaga------tcactctcgttgccatcttggtattggtgggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgtgctgacctcctgtctcat------------------------------------------tctgagac--agactgcctaaccttctgggaatacagccaagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctctggttcaaacgcctctaacaG-T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64130557 442 + 77229886 gtaaagaaataaagaatggctactccataggaagagcagccccgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaac-aggggtggattattcatgcctcccccttttagaccacacagggtaacttcctaacattgccatggcatctgtaaactgtcacggtcctggtaggagtgtagcagtgaggacgatgagaga------tcactctcgttgacatcttggtattggtaggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgtgctgacctcctgtctcat------------------------------------------tctgagac--agactgcctaaccttctgggaatacagccaagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctctggttcaaacgcctctaacaG-T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350389 441 + 17472758 gtaaagaaataaagaatggctactccataggaagagcagccccgagggctgctggttgccca-ttttatggttatttcttgatgatatgctaaac-aggagtggattattcatgcctcccccttttagaccacacagcgtaacttcctaacattgccatggcatctgtaaactgtcacggtcctggtaggagtgtagcagtgaggacgatgagaga------tcactctcgttgccatcttggtattggtgggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgtgctgacctcctgtctcat------------------------------------------tctgagac--agactgcctaaacttctgggaatacagcccagta------------------------------agttttagcctcattttatccagctcctattcaaaatggagttgctctggttcaaacgcctctaacaG-T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390475 443 - 152096393 gtaaaggaataaagaatggccactccgtagaaagagcagccctgagggctgctggttgcccatttttatggatatttcttgatgatatgctaaacaaggggtggattattcatgcctcccccttttagaccctacagggtaaattcctaacattgccacggcatttgtaaactgtcacggtgctggtaggagtgtagcagtgaggacgatgaaaga------tcaccctcgttgccatcttggtattggtgggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatgttgtgctgacctcctgtctcat------------------------------------------tgtgtgac--agactgcctaaccgtatgggaatacagcccagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctctggttcaaacgcctctaacaG-T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57339888 444 + 70235451 gt-aaggaataaagaatagctactccattggaagagcagccctgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaagggtggatcattcatgcctcccccttttagaccatatagggtaacttcttaacattgccatggcatttgtaaactgtcatggtgccggtaggagtgtagcagtgagaacaatgagaga------tcactctcgttgccatcttggttttggtgggttttagctggcttcttttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgggctgacctcctgtcgcat------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctttggctcaaacgcctctaacaGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031273 444 - 75711847 gt-aaggaataaagaatagctactccattggaagagcagccctgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaggggtggatcattcatgcctcccccttttagaccatatagggtaacttcttaacattgccatggcatttgtaaactgtcatggtgccggtaggagtgtagcagtgaggacaatgagaga------tcactctcgttgccatcttggttttggtgggttttagctggcttcttttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgggctgacctcctgtcgcat------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctttggctcaaacgcctctaacaGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584048 442 - 18804593 gt-aaggaataaagaatagctactccattggaagagcagccctgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaggggtggatcattcatgcctcccccttttagaccatatagggtaacttcttaacattgccatggcatttgtaaactgtcatggtgccggtaggagtgtagcagtgaggacaatgagaga------tcactctcgttgccatcttggttttggtgggttttagctggcttcttttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgggctgacctcctgtcgcat------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctc--tttatccagctcctattcaaaatggagttgctttggctcaaacgcctctaacaGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13200780 443 + 18905526 gt-aaggaataaagaatgactactccattggaagagcagccctgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaggggtggatcattcatgcctcccccttttagaccatatagggtaacttcctaacattgccatggcatttgtaaactgtcatggtgccggtaggagtgtagcagtgaggacaatgagaga------tcactctcgttgccatcttggttttggtgggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgggctgacctcctgtcgcat------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctttggctcaaacgcctctaacaGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60030698 449 - 72318688 gt-aaggaataaagaatagctactccattggaagagcagccctgagggctgctggttgcccatttttagggttatttcttgatgatatgctaaacaaggggtggatcattcatgcctcccccttttagaccatatagggtaacttcctaacattgccatggcatttgtaaactgtcatgttgccagtaggagtgtagcagtgaggatgatgagagatcactctcactctcgttgccatcttggttttggtgggttttagccggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgggctgacctcctgtcgcat------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctcattttatccagcttctattcaaaatggagttgctttggctcaaatgcctctaacaGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364316 442 - 1517660 gt-aaggaataaagaatggctactccattggaagagcagccctgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaggggtggatcattcatgcctcccccttttagacca-atagggtaacttcctaacattgccatggcatttgtaaactgtcatggtgccggtaggagtgtagcagtgaggacaatgagaga------tcactctcgttgctatcttggttttggtgggttttagctggcttc-tttttt----------------------atcagcaaactgttttattgccaaggccttaatgacctgtatcttgggctgacctcctgtcgcat------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctcattttatccagctcctattcaaaatggagttgctttggctcaaacgcctctaacaGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464394 435 + 6513552 gt-aaggaataaaaaatagctactccatagaaagagcagctctgagggctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaagggtggatcattcatgcctcccccttttagaccatatagggtaacttcctaacattgccatggcatttgtaaactgtcatggtgccggtagg--------aatgaggacgatgagaga------tcactctcgttgccatcttggttttgttgggttttagctggcttcttttttt----------------------atcagcaaactgttttatt-ccaaggccttaatgacctgtatcttgggctgacctcctgtcgcgt------------------------------------------tctgtgac--agactgcctaactgtctgggaatacagcccagta------------------------------agtttcagcctcattttatccagttcctattgaaaatggagttgctttggctcaaacgcctctaacaGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233134 448 + 117903854 gtaaaggaattaagaatggctgctccataggaagagcagccctaagggtg--cagttgcccatttttatggttatttcttgatgatatgct-tgcaaggggtggattattcatgtctcccccttttagaccataca-ggtaccttcctaacattgccatggcatttgtaaactgtcgtggtgct-gctggagtgtagcaatgaggacactgagata------tcactctcgttgccatcttggtaacaataggttttagctggcttt-ttttttttttttttt--------------taagcaaactgttttattagcaaggccttaatggcctgtatcttgtactgacctcccatctcat------------------------------------------tctgtgacttagcctgcctaaccgtctgggaatgaaacccagta------------------------------agtttcagcctcattttatccagctcgtattcaaaaaggaattgctctgattcaaaccccgctaacaG-T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426416 453 - 31320352 gtaaaggaataaagaatggctactccataggaagagcagccctaagggta--tgattgcccatttttatggttatttcttgatgatatgct-tgcaaggggtggattattcatgtctcccccttttagaacatacagggtaacttcctaacattgccatggcatttgtaaactgtcatggtgct-gcaggagtgtagcgatgaggacaatgagaaa------tcactctcgttgccatcttggtatcagtgggttttagctggcctt-ttttttttttttttt----------ttaatcagcaaactgttttattagcaaggccttaatgacctgtatctcatactgacctcccatctcat------------------------------------------tctgtgacttagactgcctaaccatctgggaatgaaatccagta------------------------------agtttcagcctcattttatccagctcctattcaaaaaggaattgctctggttcaaatccttctaacaG-T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1621786 413 + 2203405 gtaaaggaataaagaatggctactccataggaagagcagccctaaggttg--cggttgcccatttttatggttatttcttgatgatatgct-tgcaaggggtggattattcatgtctcccccttttagaccatacagggtaacttcctaacattgccatggcatttataaactgtcatggagcc-gcaggagtgtagcgatgaggacaatgagaaa------tcactctcgttgccatcttggtatcagtgggttttagctggcttt-tttttttttttttnn------------------------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtttcagcctcattttatccagctcctattcaaaaaggaattgctctggttcaaatccctctaacaG-T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3573943 463 - 14941987 gtaaaggaataaagaatggctactccataggaagagcagccctaagggtg--tggttgcccatttttatggttatttcttgatgatatgct-tgcaaggggtggattattcatgtctcccacttttagaccatacaggctaacttcctaacattgccatggcatttgtaaactgtcatggtgcc-acaggagtgtagcgatgaggacaatgagaaa------tcactctctttgccatctttgtatcagtgggttttagctggcgtt-ttttttgtttgtttgtttgtttgttttaatcagcaaactgttttattagccaggtcttaatgacctgtatcttgtactgacctcccatctcat------------------------------------------tctgtgacttagactgcctaaccatctgggaatgaaacccagta------------------------------agtttcagcctcattttatccagctcctattcaaaaaggaatttctctggttcaaacccctctgacaG-T i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e dasNov3.JH575754 468569 2 - 2150887 I e canFam3.chr1 112289635 0 - 122678785 C e otoGar3.GL873546 11217956 0 - 20685099 C a score=40919.000000 s hg38.chr18_GL383571v1_alt 102155 3 + 198278 AAG s panTro5.chr18 65006740 3 + 78221452 AAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64130999 3 + 77229886 AAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350830 3 + 17472758 AAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390918 3 - 152096393 AAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340332 3 + 70235451 AAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031717 3 - 75711847 AAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584490 3 - 18804593 AAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201223 3 + 18905526 AAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031147 3 - 72318688 AAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364758 3 - 1517660 AAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464829 3 + 6513552 AAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233582 3 + 117903854 AAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426869 3 - 31320352 AAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622199 3 + 2203405 AAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574406 3 - 14941987 AAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11217956 3 - 20685099 AAA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 468571 3 - 2150887 AAG i dasNov3.JH575754 I 2 C 0 e proCoq1.NW_012148742v1 1253085 6 - 1406956 I e canFam3.chr1 112289635 0 - 122678785 C a score=10326.000000 s hg38.chr18_GL383571v1_alt 102158 2 + 198278 AA s panTro5.chr18 65006743 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131002 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350833 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390921 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340335 2 + 70235451 AT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031720 2 - 75711847 AT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584493 2 - 18804593 AT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201226 2 + 18905526 AT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031150 2 - 72318688 AT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364761 2 - 1517660 AT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464832 2 + 6513552 AC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233585 2 + 117903854 AA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426872 2 - 31320352 AA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622202 2 + 2203405 AA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574409 2 - 14941987 AA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253091 2 - 1406956 AA i proCoq1.NW_012148742v1 I 6 C 0 s otoGar3.GL873546 11217959 2 - 20685099 GA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 468574 2 - 2150887 AA i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112289635 0 - 122678785 C a score=801233.000000 s hg38.chr18_GL383571v1_alt 102160 61 + 198278 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGATAAATGAAACTGAAAGAAAT s panTro5.chr18 65006745 61 + 78221452 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGATAAGTGAAACTGAAAGAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131004 61 + 77229886 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGATAAATGAAACTGAAAGAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350835 59 + 17472758 ATGTCACAATATAATCAAATTTATTCTGAAACTC--TGTGATAAATGAAACTGAAAGAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390923 61 - 152096393 ATGTCACAATATAATCAAATTTATTCTGAAACTCTTTGTGATAAATGAAACTGAAAGAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340337 56 + 70235451 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGAT-----AAACTGAAAGAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031722 56 - 75711847 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGAT-----AAACTGAAAGAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584495 56 - 18804593 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGAT-----AAACTGAAAGAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201228 56 + 18905526 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGAT-----AAACTGAAAGAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031152 56 - 72318688 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGAT-----AAACTGAAAGAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364763 56 - 1517660 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGAT-----AAACTGAAAGAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464834 61 + 6513552 ATGTCATAATATAATCAAATTTATTCTGAAACTCTTTGTGATAAATGAAACTGAAAGAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233587 61 + 117903854 ATGTCATAATATAATCAAATTTATTCTGAAATGCTTTGTGATAAATGAAACTGAAGGAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426874 61 - 31320352 ATGTCATAATATAATCAAATTTATTCTGAAATGCTTTGTGATAAATGAAACTGAAGGAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622204 61 + 2203405 ATGTCATAATATAATCAAATTTATTCTGAAATGCTCTGTGATAAATGAAACTGAAGGAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574411 60 - 14941987 ATGTCATAATATAATCAAATTTATTCTGAAATGTTTTGTGATAAATG-AACTGAAGGAAAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253093 61 - 1406956 ATGCCATAATATAATCAAATTTATACTGAAACTCTTCATGATAAATGAAACTGAAAGAAAT i proCoq1.NW_012148742v1 C 0 I 79 s otoGar3.GL873546 11217961 61 - 20685099 ATGTCATAATATAATCAAATTTATATTGAAACTCTTCGTGATAAATGAAACAGAAGGACAT i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112289635 52 - 122678785 ATTTCATAATATAATCAAA-------TGGAAATC--TGTGAAAAATGAAGCTGAAAGAAAT i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 468576 60 - 2150887 AACTCAAAATGTAATAAAACCTGTAC-AAAACTCCTTGTGATAAATGAAACTGAAAGAAAT i dasNov3.JH575754 C 0 I 1 a score=764229.000000 s hg38.chr18_GL383571v1_alt 102221 66 + 198278 TATAAATCC----CAGTTAAA-ATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT s panTro5.chr18 65006806 70 + 78221452 TATAAATCCCAAACAGTTAAA-ATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131065 70 + 77229886 TATAAATCCCAAACAGTTAAA-ATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350894 70 + 17472758 TATAAATCCCAAACAGTTAAA-ATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139390984 70 - 152096393 GATAAATCCCAAACAGTTAAA-ATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCG---TAGGAACTAAAT----TTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340393 71 + 70235451 TATAAATCCTAAACAGTTAAAAATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031778 71 - 75711847 TATAAATCCTAAACAGTTAAAAATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584551 71 - 18804593 TATAAATCCTAAACAGTTAAAAATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201284 71 + 18905526 TATAAATCCTAAACAGTTAAAAATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031208 71 - 72318688 TATAAATCCTAAACAGTTAAAAATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364819 71 - 1517660 TATAAATCCTAAACAGTTAAAAATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464895 71 + 6513552 TACAAATCCCAAACAGTTAAAGATA-AAAGGAAATATTGACATAAATTCTAA----------AGTCG---TAGGAACTAAAT----TTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233648 71 + 117903854 TATAAATCCCAAACAGTTAAAGATA-AAAGTAGACACTGACATAAATTCTGA----------AGACA---TAGGAACTAAAT----TTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19426935 71 - 31320352 TATAAATCCCAAACAGTTAAAAATA-AAAGGAGACACTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAT----TTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622265 71 + 2203405 TATAAAGCCCAAACAGTTAAAAATA-AAAGGAGACACTGACATGAATTCTAA----------AGTCA---TAGCAACTAATT----TTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574471 71 - 14941987 TATATATCCCAAACAGTTAAAAATA-AAAGGAGACACTGACATAAATTCTAA----------AGTCA---TAGGAACTAAAG----TTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11218023 79 - 20685099 TATAAATTCCAAACAGTTAAAAATA------AGACATTGACATCAATTCCAAACCTGCAGATAGCCAGTTTAGCAGTTGACT----TCT i otoGar3.GL873546 I 1 I 1 s canFam3.chr1 112289688 72 - 122678785 TATGAA----AAACTGTCAAAAATGTAAAGTAAGCCTTGACATAAATTCAGA----------AGTTG---TAGGAAATAAATGGACTCT i canFam3.chr1 I 1 I 1 s dasNov3.JH575754 468637 59 - 2150887 TATAAATGCCAAACTGTTCAA-GTA-ACAG-AGAAAGTGATACAAATTT-------------AGACT---T------TGACT----TC- i dasNov3.JH575754 I 1 C 0 e proCoq1.NW_012148742v1 1253154 79 - 1406956 I a score=628849.000000 s hg38.chr18_GL383571v1_alt 102287 53 + 198278 TCATGTATGCTAACATGTAAAAAAGCATAGAAATTTGAATATC-AATTTTATAT s panTro5.chr18 65006876 53 + 78221452 TCATGTATGCTAACATGTAAAAAAGCATAGAAATTTGAATATC-AATTTTATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131135 53 + 77229886 TCATGTATGCTAACATGTAAAAAAGCATAGAAATTTGAATATC-AATTTTATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5350964 46 + 17472758 TCATGTATGC-------TAAAAAAGCATAGAAATTTGAATATC-AATTTTATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139391054 53 - 152096393 TCATGTATGCTAACATGTAAAAAAGCATAGAAATTCGAATACC-AATTTTATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340464 52 + 70235451 TCATGTATGCTAACATGT-AAAAAGCATAGAAATTTGAGTATC-AATTTTATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031849 52 - 75711847 TCATGTATGCTAACATGT-AAAAAGCATAGAAATTTGAGTATC-AATTTTATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584622 52 - 18804593 TCATGTATGCTAACATGT-AAAAAGCATAGAAATTTGAGTATC-AATTTTATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201355 52 + 18905526 TCAAGTATGCTAACATGT-AAAAAGCATAGAAATTTGAGTATC-AATTTTATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031279 52 - 72318688 TCAAGTATGCTAACATGT-AAAAAGCATAGAAATTTGAGTATC-AATTTTATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364890 52 - 1517660 TCAAGTATGCTAACATGT-AAAAAGCATAGAAATTTGAGTATC-AATTTTATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3464966 52 + 6513552 TCATGTATGCTAACATGT-AAAAAGCATAGAAATTTGAATATC-AATTTTACAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233719 53 + 117903854 TCATGTATGGGAACTTGAAAAAAAGCATAGACATTTGAATATC-AATTTTATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19427006 52 - 31320352 TCATGTAGGGGAACATGAAAAAAA-CATAGACATTTGAATATC-AATTTTATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622336 53 + 2203405 TCATGTATGGGAACATGAAAAAAAGCATAGACATTTGAATATC-AATTTTATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574542 50 - 14941987 TCATGTATGCGAACATGAAGAAAAGCATAGACATTTGAATATC-AATT---TAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253233 53 - 1406956 TCATGTACACTAAAATGAAAAATAGCATAGAAATATGAATATC-AATTTTATAT i proCoq1.NW_012148742v1 I 79 I 51 s otoGar3.GL873546 11218103 53 - 20685099 TCATGTCCACTAACATGAAAAATAGCACAGAATGCTGGGTATC-AGTTTTATAG i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112289761 53 - 122678785 TCATGTAGATTAACATGTAAAGCACTATACAAGTCTGAATACT-AATTTTATGC i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 468696 54 - 2150887 CCATGTAGGCAAACATGAAAAATAATATAGAAGTCTGAATATCAAATTTTATAT i dasNov3.JH575754 C 0 C 0 a score=362678.000000 s hg38.chr18_GL383571v1_alt 102340 34 + 198278 TATATGGATTATGCCCATAATATATAAGA-AAACA--------- s panTro5.chr18 65006929 34 + 78221452 TATATGGATTATGCCCATAATATATAAGA-AAACA--------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131188 34 + 77229886 TATATGGATTATGCCCACAATATATAAGA-AAACA--------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351010 34 + 17472758 TATATGGATTATGCCCATAATATATAAGA-AAACG--------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139391107 34 - 152096393 TATATGGATTATGCCCATAATATATAAGA-AAACA--------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340516 34 + 70235451 TATATGGATTTTGCCCATAATATATAAGA-AAACA--------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031901 34 - 75711847 TATATGGATTTTGCCCATAATATATAAGA-AAACA--------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584674 34 - 18804593 TATATGGATTTTGCCCATAATATATAAGA-AAACG--------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201407 33 + 18905526 TATATGGATTTTGCCCATAATATGTAAGA-AAAC---------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031331 34 - 72318688 TATATGGATTTTGCCCATAATATATAAGA-AAACA--------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364942 34 - 1517660 TATATGGATTTTGCCCATAATATATAAGA-AAACA--------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3465018 34 + 6513552 TATATGGATTTTGCCCAGAATATGTAAGA-AAACA--------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233772 34 + 117903854 TATATGGTTTATGCCTATAATATATAAAG-AAACA--------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19427058 35 - 31320352 TATATGGATTATGCCTATAATATATAAAGAAAACA--------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622389 34 + 2203405 TATATGGATTATGCCTATAATACATAAAG-AAACA--------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574592 34 - 14941987 TATATGGATTATGCCTATAATATATAAAG-AAACA--------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11218156 33 - 20685099 ACCAGGGATAACTCCTGTAAC-TGTAAGG-ATACA--------- i otoGar3.GL873546 C 0 I 6 s canFam3.chr1 112289814 34 - 122678785 TATATGGATTGTGTTTGTAATATAGAAGA-ATATA--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 468750 43 - 2150887 AGTATGGATTATATCCACAATATATATGG-ATGTGTGTTTGTCC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1253286 51 - 1406956 I a score=6733722.000000 s hg38.chr18_GL383571v1_alt 102374 469 + 198278 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAAGCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTACACTAAATGACCTCTAGTTCCCTTAGAGAT--AAAGATTGAATCAA--TTTTTTTATTTTTCTGCTGAATTTCAAAATTGATGCATCAGTTAGTAAGTTACTCCCTGGATGCACA-AGCGTATTT----TTCTCTTTCCTTttttt-gaacttgcatcatgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCTTCACAGAAAACACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCGTCCAGCTTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGTTCAAATCTCTTAACATTGAGGAATTTATAAAACCCCAAGTAAAAGTTAATTCCTAAAGCACTCA s panTro5.chr18 65006963 469 + 78221452 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAAGCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTATACTAAATGACCTCTAGTTCCCTTAGAGAT--AAAGATTGAATCAA--TTTTTTTATTTTTCTGCTGAATTTCAAAATTGATGCATCAGTTAGTAAGTTACTCCCTGGATGCACA-AGCGTATTT----TTCTCTTTCCTTttttt-gaacttgcaccatgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCTTCATAGAAAACACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCGTCTAGCTTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACCCCAAGTAAAAGTTAATTCCTAAAGCACTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131222 469 + 77229886 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAGGCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTACACTAAATGACCTCTAGTTCCCTTAGAGAT--AAAGATTGAATCAA--TTTTTTTATTTTTCTGCTGAATTTCAAAATTGATGCATCAGTTAGTAAGTTACTCCCTGGATGCACA-AGCGTATTT----TTCTCTTTCCTTttttt-gaacttgcatcatgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCTTCATAGAAAACACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCGTCCAGCTTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACCCCAAGTAAAAGTTAATTCCTAAAGCACTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351044 466 + 17472758 TGTG-----------------TGA---------------------------------------------------------------------------------------------------------------------TAAAAAGCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTACACTAAATGACCTCTAGTTCCCTTAGAGAT--AAAGATTGAATCAA--TTTTTTTATTTTTCTGCTGAATTTCAAAATTGATGCATCAGTTAGTAAGTTACTCCCTGGATGCACA-AGCGTATTT----TTCTCTTTCCTTttttt-gaacttgcatcatgtctttcaggccactagggtaacatctaaaaaattatcacttcagtgGCTCTTCATAGAAAACACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGTAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCGTCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139391141 470 - 152096393 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------CAAAAAGCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTTAGAGAT--AAAGATTGAATTAA-TTTTTTTTATTTTTCTGCTGAATTTCAAAATTGATGCATCAGTTAGTAAGTTACTCCCTGGATGCACA-AGCGTATTT----TTCTCTTTCCTTttttt-gaacttgcatcgtgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAACACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCGTCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57340550 470 + 70235451 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAATCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTCAGAGAT--AAAGATTGAATCAA-TTCTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCACG-AGCGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatttctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63031935 470 - 75711847 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAATCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTCAGAGAT--AAAGATTGAATCAA-TTCTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCACG-AGCGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatttctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13584708 470 - 18804593 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAATCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTCAGAGAT--AAAGATTGAATCAA-TTCGTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCACG-AGTGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatttctttcaggccactagggtaacatctaaaaaattatcacttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201440 469 + 18905526 -GTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAATCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTCAGAGAT--AAAGATTGAATCAA-TTTTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCACG-AGCGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatttctttcaggccactagggtaacatctaaaaaattatcgcttcagtgACTCCTCATAGAGAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCTTAAAGCACTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031365 470 - 72318688 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAGTCATTTTCAAACTTT-----TATATCATGAGACTAAGAGGACATAC------TTGCACTAAATGACCTCTAGTTCCTTTAGAGAT--AAAGATTGAATCAA-TTTTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCACG-AGCGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatttctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 364976 471 - 1517660 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAATCATTTTCAAACTTT-----TATATCATGAGACTAAAAGGACCTAC------TTGCACTAAATGACCTCTAGTTCCCTTAGAGAT--AAAGATTGAATCAATTTTTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCATG-AGCGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatttctttcaggccactagggtaacatctaaaaaactatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3465052 470 + 6513552 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------TAAAAATCATTTTTAAACTTT-----TCTATCATGAGACTAAAAGGACATAC------TTGCACTGAATGACCTCTAGTTCCCTTACAGAT--AAAGATTGAATCAA-TTTTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTGGATGCACA-AGCGTATTT----TTCTTTTTCCTTttttt-gaacttgtatcatgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTATTTTGTCATTTTAGGCATCCAGCCTTGGCTTAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105233806 467 + 117903854 CGTGT--------------GCTGA---------------------------------------------------------------------------------------------------------------------ATAAAAGCATTTTCAAACTTT-----TATATCATGAGCCTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTAAGAGAT--AAAGATTAAATCAC--TTTCTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTAGATGCACA-AGGGTATTT----TTCTTTTTCcatttttt-aaacttgcatcatgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAATTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTACTTTGTCATTTTAGGCATCCAGTCTTAGCTCAAAACCCAAAGAG-AGATGAGGAAAAGGTCAAATCTCTTAACATTGAGGAATTTAT-AAACTGCAAGTAAAAGTTAATTCCTAAAGCACTCG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19427093 469 - 31320352 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------CTAAAAGCATTTTCAAACTTT-----TATATCAAGAGCCAAAAAGGACATAC------TTGCAATAAATGACCTCTAGTTCCCTAAGAGAT--AAAGATTAAATCAC--TTTTTTTATTTTTCTGCTCAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTAGATGCACA-AGGGTATTT----TTCTTTTTCCTTttttt-aaacttgcatcatgtctctcaggccactagggtaacatctaaaaaattattgcttcagtgGCTCCTCATAGAAAGTACTTTGGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTACTTTGTCATTTTAGGCATCTAGTCTTGGCTCAAAACCCAAAGAGAAGATGAGGAAAAGGTCAAATCTCTTAACATTGAGAAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCATTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622423 469 + 2203405 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------CTAAAAGCATTTTCAAACTTT-----TATATCATGAGCCTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCATAAGAGAT--AAAGATTAAATCAC--TTTTTTTATTTTTCTGCTGAATTTCAAAACTGACGCATCAGTTGGTAAGTTACTCCCTAGATGCACA-AGGGTATTT----TTCTTTTTCCTTttttt-aaacttgcatcatgtctttcaggccgctagggtaatatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTGGAGAGTTACTTTCAATGTTATATTCTGGGAAACTGCCAGAAAATTACAAGACATTTTCCTTGTAGTACTTTGTCATTTTAGGCATCCAGTCTTGGCTCAAAACCCAAAGAGAAGATGAGGAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCCTAAAGCACTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3574626 469 - 14941987 TGTGT--------------GTTGA---------------------------------------------------------------------------------------------------------------------CTAAAAGCATTTTCAAACTTT-----TATGTCATGAGCCTAAAAGGACATAC------TTGCACTAAATGACCTCTAGTTCCCTAAGAGAT--AAAGATTGAATCAC--TTTTTTTATTTTTCTGCTGAATTTCAAAACTGATGCATCAGTTGGTAAGTTACTCCCTAGATGCACA-AGGGTATTT----TTCTTTTTCCTTttttt-aaacttgcatcatgtctttcaggccactagggtaacatctaaaaaattatcgcttcagtgGCTCCTCATAGAAAGCACTTTTGAGAGTTACTTTCAATGTTATATTCTGGGCAACTGCCAGAAAATTACAAGACATCTTCCTTGTAGTACTTTGTCATTTTAGGCATCCAGTCTTGGCTCAAAACCCAAAGAGAAGATGAGAAAAAGGTCAAATCTCTTAACATTGAGGAATTTATAAAACTCCAAGTAAAAGTTAATTCTTAAAGCACTCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253337 465 - 1406956 TGTGT--------------GCTAA---------------------------------------------------------------------------------------------------------------------TAAAATCCATTTTTGAACTTT-----TATAACATGAGGCTAAAAGGAGATATTAATACTTTCACTAAATGACCTCTAGGTCCCTTAGAGAT--AAAGATTGAATCAT----------TTTTTTTTCTGAAT-TTCAAACTGATGCATCAGTTGATAAGTTACTCCCTGCGTGCACA-TGGGTATTT----TTCTTTCTACTtttttg--aaactgcatcatgtctttcagaccactagagtaaaatctaaaaaattgtcgcttcaatgGCTCCTCACAGAATGCACTTTTGAGACTTCCTTCCTGTGTTATATTCTGGGAAACTGCCAAAAAATTACAAGACATTTTCCTTGTAGCATTTTGTCATTTTAGGCATCTGCTCTTGGCTGAAAATCCAAAGAGAAAATGAAGAAAAGGTCAAATCTCTTAAAATTGAGAAATTTATAAAGCTCGAAGTAAAAGTTAATTCCTAAAGCACTTA i proCoq1.NW_012148742v1 I 51 I 69 s otoGar3.GL873546 11218195 591 - 20685099 TGTGTCCCTGGTGAGCTTCACTAAAATGCATTTTTGTTGTTGTTTTTTTTTGTTGTTTtttttggccagggctggatttgaaccggccacctccagcataaggagctggcgccctactcctttgagccacaagtgccgcccTAAAATGCATTTTTGAACTTT-----CATGAGATGAGGCTAAAAGGAGGTGT------TTTCACTAAATGACCTCTCACTCCCTCAGAGAT--AAAGATCGAATCAA----------CTTTTCGTCTGCATCCCCAGACTGATGCATCAGTGGGCAAGTTACTCTCTAGGAGCGCA-CAGGTATTT----TTCCCTTTTCCTttttgtaaacctgcgtcatgtctttcagaccactagggtaacatctaaagaattatcgcttcagtgGCTTCTCATGGAAAGTAC-TCTGAGCCTCACTTCCTGTGTTACATTCTGGGCGACTGCCAAAAGCTTACAAGACATTTTCCTTGTAGAGCTTTATCTTTTTAGTCATCTGGTCTCAGCTGAGAACTCAAAAAGAAGATGAAG-AAAGGTCAAATCTTTTAACATGGAGAAATGTATAAAAATCCTGGTGAGAGTTAATTCCTAAAGCACTGG i otoGar3.GL873546 I 6 I 2 s canFam3.chr1 112289848 458 - 122678785 TTTGT--------------GTTAA---------------------------------------------------------------------------------------------------------------------TAAAATATACTTTTGAGCTTT-----TATAACAGGAGATTGAAAGGAAATGC------CTGTACTAAATAATCTGTACTTTTCTTAGAGTTCCAAAGATTGAATCAT----TTTTTTTTTTTCTGCTGCATTCCCAAATTGATGCATCACTCGGCAAGTTACTTCCTGGATGCAGG-TGAATATTTCTTCTTTTTTCCCTTTCTTTT-GAAACTCTATTATGTCTCTCAGGCCACT-TAACAACATCTGAAAAGTGATCACTTCAGTGGCTCCTCATAGAATGTACTTTTGTGTCTTATCTCTTGTATTATATTCTGAACAACTGCCAGCAAATTACAAGACTCTTTCCTTGTAGTGTTTTGTCATTTTAGGCATCTAGTCTTGGCTGAAAATCCAAAGAG--------------GTCAAAACTCTTAACATTGAGGAATTTATAAAACTCGAAGTAAAAGTTAATTCCCAAAGCTCTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 468793 459 - 2150887 TGTGT--------------GTTAA---------------------------------------------------------------------------------------------------------------------TAAAATAAATTTTTAAGTTTCTCTCATATAAAATGCaattaaaaggagggac------ttgcactaaatgacctctagctcccttacatttccaaagattGCATCAA---------CTTTTTCTGCTGTATTCCAAATGTGATGCATCAATTGgtaagttactccctggatgcacagggggtatgt---------------tttttt-taacttgaatcatgtctttcaagccactagggtaacatccaaaaatttattgcttcagtgGCTCCTCATGGAAAGTACTTTTGAGAATTTCTTCCTATATTGTATTTTGGTCAACTGCCAGAAAATTACAAGATATTTTCCTTGTAGTAGTTTGTCATTTTAGGCATCCAGTCTTGGCTGAAAATCCAAAGAGAAAATGAAGAAAAGGTCAAATCTCTTAACATTGTGGAATTTATAATATTCCAAGCAAAAATTAATTCCCAAAGCACTCA i dasNov3.JH575754 C 0 C 0 a score=5907.000000 s hg38.chr18_GL383571v1_alt 102843 1 + 198278 C s panTro5.chr18 65007432 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131691 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351510 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 I 1 s nomLeu3.chr4 139391611 1 - 152096393 C i nomLeu3.chr4 C 0 I 1 s rheMac8.chr18 57341020 1 + 70235451 C i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63032405 1 - 75711847 C i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13585178 1 - 18804593 C i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13201909 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60031835 1 - 72318688 C i chlSab2.chr18 C 0 I 1 s manLeu1.NW_012106698v1 365447 1 - 1517660 C i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3465522 1 + 6513552 C i colAng1.NW_012115433v1 C 0 I 1 s calJac3.chr13 105234273 1 + 117903854 T i calJac3.chr13 C 0 I 117 s saiBol1.JH378121 19427562 1 - 31320352 T i saiBol1.JH378121 C 0 I 1 s cebCap1.NW_016107689v1 1622892 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 I 1 s aotNan1.NW_018502140v1 3575095 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 I 1 s otoGar3.GL873546 11218788 1 - 20685099 T i otoGar3.GL873546 I 2 C 0 s canFam3.chr1 112290306 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 469252 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1253802 69 - 1406956 I a score=709236.000000 s hg38.chr18_GL383571v1_alt 102844 66 + 198278 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CAAAATATGTTTGTATA-TCTGA s panTro5.chr18 65007433 66 + 78221452 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CAAAATATGTTTGTATA-TCTGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131692 66 + 77229886 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CAAAATATGTTTGTATA-TCTGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351512 66 + 17472758 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CGAAATATGTTTGTATA-TCTGA i gorGor5.CYUI01014964v1 I 1 C 0 s nomLeu3.chr4 139391613 66 - 152096393 -------------TGACAGCAGACA-CAACTGT--------TAGGTCTTTATACACAGGTTGTTGA---------------------------------CGAAATATGTTTGTATA-TCTGA i nomLeu3.chr4 I 1 C 0 s rheMac8.chr18 57341022 65 + 70235451 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTG----------------------------------TGAAATATGTTTGTATA-TCTGA i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63032407 65 - 75711847 -------------TGACAGCAGATA-CAACTGT--------TATGTCTTTATACACAGGTTGTTG----------------------------------TGAAATATGTTTGTATA-TCTGA i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13585180 65 - 18804593 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTG----------------------------------TGAAATATGTTTGTATA-TCTGA i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13201911 65 + 18905526 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTG----------------------------------TGAAATATGTTTGTATA-TCTGA i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60031837 66 - 72318688 -------------TGACAGCAGACA-CAACTGT--------TACGTCTTTATACACAGGTTGTTGA---------------------------------TGAAATATGTTTGTATA-TCTGA i chlSab2.chr18 I 1 C 0 s manLeu1.NW_012106698v1 365449 65 - 1517660 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTG----------------------------------TGAAATATGTTTGTATA-TCTGA i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3465524 66 + 6513552 -------------TGACAGCAGACA-CAACTGT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CGAAATATGTTTGTATA-TCTGA i colAng1.NW_012115433v1 I 1 C 0 s calJac3.chr13 105234391 66 + 117903854 -------------CGACAGCAGACA-CAACTAT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CTAAATATGTTTGTATA-TCTGA i calJac3.chr13 I 117 C 0 s saiBol1.JH378121 19427564 66 - 31320352 -------------TGACAGCAGACA-CAACTAT--------TATGTCTTTATACACAGGCTGTTGA---------------------------------CTAAATATGTTTGTGTA-TCTGA i saiBol1.JH378121 I 1 C 0 s cebCap1.NW_016107689v1 1622894 66 + 2203405 -------------TGACAGCAGACA-TAACTAT--------TATGTCTTTATACACAGGTTGTTGA---------------------------------CTAAATATGTTTGTATA-TCTGA i cebCap1.NW_016107689v1 I 1 C 0 s aotNan1.NW_018502140v1 3575097 66 - 14941987 -------------TGACAGCAGACA-CAACTAT--------TACGTCTTTATACACATGCTGTTGA---------------------------------CTAAATATGTTTGTATA-TCTGA i aotNan1.NW_018502140v1 I 1 C 0 s otoGar3.GL873546 11218789 65 - 20685099 -------------GAAAAGCTAGCA-CAATAGT--------TAGGTC-AAAGACTCAGTTTGTTGA---------------------------------CTAAATGCGTTTGTCTA-TTTTA i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112290307 99 - 122678785 -------------GAAAagcaagca-caacagt--------tatgtcttgatatacaggtcatacacagatcaatggaatagaatagagagcacagaactaaaccacacttacatg-gtcaa i canFam3.chr1 C 0 I 8 s dasNov3.JH575754 469253 89 - 2150887 AAGAGATTGATTATCATAGTTGATGTTGAATATGTCAAGAATATGTCTTGATGTAGAGATTGTTAA---------------------------------GTAAATAAATATGAATACTTTGA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1253802 69 - 1406956 I a score=2003600.000000 s hg38.chr18_GL383571v1_alt 102910 165 + 198278 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTAAACTGAACTGTCCATT-AAATAAGAGACATTAGAAAAA-CTATTAAAAATTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACAACCA-TTTCCTGGGCAGAATTTCCTA s panTro5.chr18 65007499 162 + 78221452 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTAAACTGAACTGTCCATT-AAATAAGAGAC---AGAAAAA-CTATTAAAAATTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACAACCA-TTTCCTGGGCAGAATTTCCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131758 165 + 77229886 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTAAACTGAACTGTCCATT-AAATAAGAGACATTAGAAAAA-CTATTAAAAATTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACAACCA-TTTCCTGGGCAGAATTTCCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351578 165 + 17472758 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAACTGTCCATT-AAATAAGAGACATTAGAAAAA-CTATTAAAAATTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACCACCA-TTTCCTGGGCAGAATTTCCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139391679 165 - 152096393 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAACTGCCCATT-AAATAAGAGACATTAGAAAAA-CTATTAAAAATTTTAATAAA-ATTGCTTTAT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCATCACCA-TTTCCTGGGCAGAATTTCCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57341087 165 + 70235451 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAATTGTCCCTT-AAATAAGAGACATTAGAAAAA-CTATTTAAATTTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACAACCA-CTTCCTGGACAGAATTTCCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63032472 165 - 75711847 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAATTGTCCCTT-AAATAAGAGACATTAGAAAAA-CTATTTAAATTTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACGACCA-CTTCCTGGGCAGAATTTCCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13585245 165 - 18804593 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAATTGTCCCTT-AAATAAGAGACATTAGAAAAA-CTATTTAAATTTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACGACCA-CTTCCTGGGCAGAATTTCCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13201976 165 + 18905526 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAACTGTCCCTT-AAATAAGAGACATTAGAAAAA-CTATTTAAAATTTTAATAAA-ATTGTTTTGT-AAAATGTACATTTTTGTTATCTGCAACACTCCTCTCACCACCA-CTTCCTGGGCAGAATTTCCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60031903 165 - 72318688 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAACTGTCCCTT-AAATAAGAGACATTAGAAAAA-CTATTTAAAATTTTAAAAAA-ATTGCTTTGT-AAAATGTACATTTTCATTATCTGCAACACTCCTCTCACGACCA-CTTCCTGGGCAGAATTTCCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 365514 165 - 1517660 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAACTGTCCCTT-AAATAAGAGACATTAGAAAAA-CTATTTAAAATTTTAATAAA-ATTGCTTTGT-AAAATGTACATTTTCGTTATCTGCAACACTCCTCTCACCACCA-CTTCCTGGGGAGAATTTCCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3465590 165 + 6513552 A--------CTTAATTTTTAATTAACCAACCACATTTTC-TTGAACTGAACTGTCCCTT-AAATAAGAGATACTAGAAAAA-CTATTTAAAATTTTAATAAA-ATGGCTTTGT-AAAATGTACATTTTTGTTATCTGCAACACTCCTCTCACTACCA-CTTCCTGGGCAGAATTTCCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105234457 162 + 117903854 GTTG---ACTTTAATTTTTAATT----AACCACATTTTC-TTGACCTGAACTGTTCATT-AAATAAGAGACAGTAGAAAAA-CTATT-AAAATTCTAATAAA-ATTGCTTTGC-AAAATCTACATTTTCATTATCTGCAACACTCCTCTC---ACTA-TTTCCTGGGCAGAATTTCCTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19427630 167 - 31320352 GTTT---AGTTTAATTTTTAATG----AACCACATTTTC-TTGACCTGAACTGTTCATTAAAATAAGAGATAGTAAAAAAAGCTATT-AAAATTCTAATAAA-ATTGCTTTGC-AAAATGTACATTTTCATTATCTGCAACACTCCTCTCACTACTA-TTTTTTGGGCAGAATTTCCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1622960 166 + 2203405 GTTG---AGTTTAATTTTTAATT----AACCACATTTTC-TTGACCTGAACTGTTCATTAAAATAAGAGACAGTACAAAAG-CTATT-AAAATTTTAATAAA-ATTGCTTTGC-AAAATGTACATTTTCATTATCTGCAACACTCCTCTCACTACTA-TTTCCTGGGCAGAATTTTCTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3575163 165 - 14941987 GTTG---AGTTTAATTTTTAATT----AACCACATTTTC-TTGACCTGAACTTTTCATT-AAATAAGAGACAGTAGAAAAA-CTATT-AAAATTCTAATAAA-ACTGCTTTGC-AAAATGTACATTTTCATTATCTGCAACACTCCTCTAATTACTA-TTTACTGGGCAGAATTTCCTA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1253871 162 - 1406956 --------GTTTAATTTTTAATTAGCCAACAATGTTTTG-TTGACCTAAACTGTC-----AAGTAAGAAGCATTAGAAAAT-CTATTGCAGATCCTAATAAAAATTGTTTTAT-AAAATGTAAATTTTCATTATTTGCAACACTTCCCTTACCACTA-TTTCCTGGGCAGAATTTCCTA i proCoq1.NW_012148742v1 I 69 I 2862 s otoGar3.GL873546 11218855 163 - 20685099 --------GCTTAATTTTTAATTAGCCAACAAGGTTTTA-TTGGCCTAAATTGTCCAAT-AAGTAAGAGGCATTA-ACAAT-CTATTAAAAATCCTAACAAATACTGTTTTAT--AAATGTACATTTTCATTATCTATAATA-TTCCCTCACCACTG-TTTCTTAGTCAGAAGTTCCTA i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112290414 160 - 122678785 --------AGTTTATTTTTAATTAGCTGACCAGGTTTTTATTGACCCAAATTGTCCGCT-AAGTAAGATACATTAGAAAAA-CTATTGAAACCTTAACAAAA-ATTCTTTTGTGAAAATGTGCATTTTTATTATCTGCAACACTTCCCTCACCACCC--------ACCACAATTTCCTA i canFam3.chr1 I 8 C 0 s dasNov3.JH575754 469342 167 - 2150887 ---GTTTAATTTAATTACAATTTAGCCGACCAGGTTTTC-TTGACCTAAACTGTTTATT-AAATGAAATGCATTAGAAAAT-CTATTGGTAATCTTACAAAT-AA----TTGT-ACATTGTACACTTTCATTATCTGCAACACTTTCTTCAACACTTCCTTTCTTGGCAGAATTTCTTA i dasNov3.JH575754 C 0 C 0 a score=2587602.000000 s hg38.chr18_GL383571v1_alt 103075 223 + 198278 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCTATTGGAATAGTGTACTCTCCTATGAGAAAAA-------------AAA--TAACCATTTAAGAAGTTAAATAATGTGTAATTACGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA s panTro5.chr18 65007661 223 + 78221452 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCTATTGGAATAGTGTACTCTCCTATGAGAAAAA-------------AAA--TAACCATTTAAGGAGTTAAATAATATGTAATTATGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64131923 222 + 77229886 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCTATTGGAATAGTGTACTCTCCTATGAG-AAAA-------------AAA--TAACCATTTAAGAAGTTAAATAATATGTAATTACGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351743 217 + 17472758 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCTATTGGAATAGTGTACTCTCCTATGAG-AAAA-------------AAA--TAAACATTTAAGCAGTTAAATAATATGTAATTACGGCCATT-----TATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139391844 222 - 152096393 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGACTACTGTGATCCATTGGAATAGTGTACTCTCCTATGAG-AAAA-------------AAA--TAAACATTTAAGCAGTTAAATAATATGTAATTATGGCCATTTAGAATATATTACATATT-----GCATCATATCATCAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57341252 223 + 70235451 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGCATCTGAGAATGGTGATTACTGTGATCCATTGGAATAGCATACTCTCCTATAAG-AAAA-------------AAA--TAAACATTTAAGCAGTTAAATAATATGTAATTATGGCCATTTATAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTGAAAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63032637 223 - 75711847 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCCATTGGAATAGCATACTCTCCTATAAG-AAAA-------------AAA--TAAACATTTAAGCAGTTAAATAATATGTAATTATGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTGAAAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13585410 219 - 18804593 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCCATTGGAATAGCATACTCTCCTATAAG-AAAA-------------------AAACATTTAAGCAGTTAAATAATATGTAATTATGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTGAAAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13202141 222 + 18905526 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCCATTGGAATAGCATACTCTCCTATAAG-AAAA-------------AAA--TAAACATTTAAGCAGTTAAATAATATGTAATTATGGCCATTTCGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60032068 222 - 72318688 TTTCTTAGCTTTGTG----ATATTAGGATGGAAATA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATACATTGGAATAGCATACTCTCCTATAAG-AAAC-------------AAA--TAAACATTTAAGCAGTTAAATAATATGTAATTATGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 365679 222 - 1517660 TTTCTTAGCATTGTC----ATATTAGGATGGAAAAA--ATAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCCATTGGAATAGCATACTCTCCTATAAG-AAAA-------------AAA--TAAATGTTTAAGCAGTTAAATAATATGTAATTATGGCCATTTAGAATATATTACATATT-----GCATCATATCATTAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3465755 220 + 6513552 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ACAGAGTAATGTATCTGAGAATGGTGATTACTGTGATCCATTGGAATAGCGTACTCTCCTATAAG-AAAA-------------AAC--TAAACATTTAAGCAGTTAAATAATACGTAATTATGGCCATTTAGAATATATTACGTATT------TATCATATCA-TAATCTTT-TCCTCTGAATTTTACCTTCTG----------CA------TCTAAGATACTG-AAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105234619 221 + 117903854 TTTCTTAGCTTTGTC----ATATTAGGATGGAAATA--ACAGAGTAATATA-ATGAGAATGGTGATTATTATGATCCATTGGAACAATGTACTCTCCTAGAAG-AAAA-------------AAA--TAAACACTTAAGCAGTTAAATAATGTGTAATTATGGCCATTCAGAATATATTACATATT-----GCATCATATAATTAATCTTT-TCCTCTGAGTTCTACCTTCTG----------TG------TCTAAGATTTTG-AAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19427797 217 - 31320352 TTTCTTAGCATTGTC----ATATTAGGATGGAAATA--ACAGAGTAATATA-ATGAGCATGGTGATTATTATGATCCATTGGAACAATGTACTCTTCTAGAAG-AGAA-------------AAA--TAAACATTTAAGCAGTTAAATAATGTGTAATTATGGCCATTCAGAGTATATGACATATT-----GCATCATA----TAATCTTT-TCCTCTGAATTCTACCTTCTG----------TG------TCTAAGATTCTG-AAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1623126 221 + 2203405 TTTCTTAGCATTGTC----ATATTAGGATGGAAATA--ACAGAGTAATATA-ATGAGAATGGTGATTATTGTGATCCACTGGAACAATGTACTCTTCTAGAAG-AAAA-------------AAA--TAAACATTTAAGCAGTTAAATAATGTATAATTATGGCCATTCAGAATATATTACATATT-----GCATCATATAATTAATCTTT-TCCTCTGAGTTCTACCTTCTG----------TG------TCTAAGATTTTG-AAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3575328 221 - 14941987 TTTCATAGCTTTGTC----ATATTAGGATGGAAATA--ACAGAGTAATATA-ATGAGAATGGTGATTACTGTGATCCATTGGAACAATGTACTCTCCTAGAAG-AAAA-------------AAA--TAAACAGTTAAGCAGTTAAATAATGTGTAATTATGGCCATTCAGAATATATTACATATT-----GCATCATATAATTAATCTTT-TCCTCTGAGTTCTACCTTCCG----------TG------CCTAAGATTTTG-AAAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11219018 214 - 20685099 TCTTTTAGCTTTGTA----GTATTAGGGTGAAAATACCATAGAAAAATGTATCTAAGTATAGTGATTACTGTGATTCATTGGAATAAAGTAGACTCCTATAAT-AAAA-------------AAAATGAAACATTTAAACTATT---------TTAATCCTGGTCAGCCAACATATATTGCATATC-----ATATTATATCACATATATAA-TCTTCTGAGT--CACCTCCT-----------CA------TCTAAGATACTG-AATG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112290574 251 - 122678785 TTTCTTACCTTTGCTTGCAATATTAGGATGAAAATATGCTAGAACAATGTATCTAAGGGTGGCAATTACTGTAAGCCATTAGAATAGTGTATTCTCCTATAAG-AAAATCCAATAATAATAATA--CAAAAGTGTATGTGGTTAAATTATGTATTATTATGACTATTGAAAATATATTACTTATT-----ACATCATATAATTAATTTTC-CTCATGTGATTCCCCCTTCTGTTTGTATCTATT------TCTAAAATATTA-AAAA i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 469509 247 - 2150887 TTTCTTAGCTTTGCA----ATATTAGGATGAAAATATGATAGAGCAATGTATCTAAGAGTGGCAATTACTGTGATCAATTGAAATAGTGTATACTTCtattaa-aaaa--caataaaaataaaa--taaaaGTTTCTGTGATTAAGTGATGCATAATTATGTCCATTCCAAATAGATTACATATTCTATTACATCATATAATTATTCTTTCTACTCTGGCTTCCCCCTGTTT----------CATTTAATTCTAAGATTTTC-AAAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I a score=4221673.000000 s hg38.chr18_GL383571v1_alt 103298 423 + 198278 ATATATTTT-----GAGTTTACCAAATTACATCATAATGTATACATATTGAGT--TAAATTGAATCTATTTCTAAAAGATAACTTCTATATAGTTAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATACAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAAAATGTAATGTAA-TTTATAAGGATAAATTTTTACTATCCTAGACAGAAATATGCAAATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAGGATCCACTATGTTATCTGATACATCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCCTCTAGTTTGCTT s panTro5.chr18 65007884 423 + 78221452 ATATATTTT-----GAGTTTACCAAATTACATCATAATGTATACATATTGAGT--TAAATTGAATCTATTTCTAAAAGATAACTTCTATATAGTTAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATACAAGTACCCACGGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAAAATGTAATGTAA-TTTATAAGGATAAATTTTTACTATCCTAGACAGAAATATGCAAATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAGGATCCACTATGTTATCTGATACATCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCCTCTAGTTTGCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64132145 418 + 77229886 ATATATTTT-----GAGTTTACCAAATTACATCATAATGTATACATATTGAGT--TAAATTGAATCTATTTCTAAAAAATAACTTCTATATAGTTAACATTTATAATAAATAC-----ATATATTTTTAAGTGTAAAATAGTGAATACAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAAAATGTAATGTAA-TTTATAAGGATAAATTTTTACTATCCTAGACAGAAATATGCAAATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAGGATCCACTATGTTATCTGATACATCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCCTCTAGTTTGCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5351960 422 + 17472758 ATATATTTT-----GAGTTTACCAAATTACATCATAATGTATACATATTGAGT--TAAATTGAATCTATTTCTAAAAGATAACTTCTATATAGTTAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATACAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAAAATGTAATGTAA-TTTATAACGATAAATTTTTACTATCCTAGACAGAAATATGCAAGTGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAGGATCCACTATGTTATCTGATACATCTCAT-GATGTCAAGGCTTAAAGTGC-TTCACTCTCCAGTTCCTTAGGAAAGCCTCTAGTTTGCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392066 418 - 152096393 ATATATTTT-----GAGTTTACCAAATTACATTATAATGTATACATATTGAGT--TAAATTGAATCTATTTCTAAAAGATAACTTCTATATAGTTAACATTTATAATAAATAC-----ATATATTTTTAAGTGTAAAATAGTGAATACAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTGGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAAAATATAATGTAA-TTTTTAAGGATAAATTTTTACTATCCTAGACAGAAATATGCAAACGTAAAGAATAAGAAAGAAAATTTAGATAAAAT--ATTAAGGATCAACTATGTTATTTGATACATCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCTTTAGGAAAGCCTCTAGTTTGCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57341475 418 + 70235451 ATATATTTT-----GAGTTTATCAAATTACATCAAAATGTATACATATTGAGC--TAAGTTGAATCTATTTCTAAAAGATAACTTCTATACAGTAAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATGCAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAA-----AATGTAA-TTTATAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAAGATTCACTATGTTATTTGATACACCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCATCTAGTTTGCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63032860 418 - 75711847 ATATATTTT-----GAGTTTATCAAATTACATCAAAATGTATACATATTGAGC--TAAGTTGAATCTATTTCTAAAAGATAACTTCTATACAGTAAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATGCAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAA-----AATGTAA-TTTATAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAAGATTCACTATGTTATTTGATACACCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCATCTAGTTTGCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13585629 418 - 18804593 ATATATTTT-----GAGTTTATCAAATTACATCAAAATGTATACATATTGAGC--TAAGTTGAATCTATTTCTAAAAGATAACTTCTATACAGTAAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATGCAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAA-----AATGTAA-TTTATAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAAGATTCACTATGTTATTTGATACACCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCATCTAGTTTGCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13202363 418 + 18905526 ATATATTTT-----GAGTTTATCAAATTACATCAAAATGTATACATATAGAGC--TAAGTTGAATCTATTTCTAAAAGATAACTTCTATACAGTCAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATGCAAGTACTCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATACA-----AATGTAG-TTTATAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAAGAAAATTGAGTTAAAAT--ATTAAAGATTCACTATGTTATTTGATACACCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAGTTCCTTAGGAAAGCATCTAGTTTGCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60032290 418 - 72318688 ATATATTTT-----GAGTTTATCAAATTACATCAAAATGTATACATATTGAGT--TAACTTGAATCTATTTCTAAAAGATAACTTCCATATAGTCAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATACAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAA-----AATGTAA-TTTACAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAATAAAATTTAGTTAAAAT--ATTAAAGATTCACTATGTTATTTGATACACCTCAT-GATGTCAAGGCTTAAAGTGCATTCATTCTCCAGTTCCTTAGGAAAGCCTCTAGTTTGCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 365901 418 - 1517660 ATATATTTT-----GAGTTTATCAAATTACATCAAAATGTATACATATTGAGC--TAAGTTGAATCTATTTCTAAAAGATAACTTCTATACAGTCAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAATAGTGAATGCAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATACA-----AATGTAA-TTTATAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAAGATTCACTATGTTATTTGATACACCTCAT-GATGTCAAGGCTTAAAGTGCATTCACTCTCCAATTCCTTAGGAAAGCATCTAGTTTGCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3465975 418 + 6513552 ATATATTTT-----GAGTTTATCAAATTATATCAAAATGCATACATATTGAGT--TAAGTTGAATGTATTTCTAAAAGATAACTTCTATATAGTCAACATTTATAATAAATACATATAATATATTTTTAAGTGTAAAACAGCGAATACAAGTACCCACTGCCCAGAATGAGAACTTGAATAGTGTTTGGTTTTGTTTTTAATCAGCATAAATGGGAATGCAAACTT---AAGGTTGTGGCTGGGATAAA-----AATGTAA-TTTATAAGGATACATTTTTACTATCCTAGACAGAAACATGCACATGTAAAGAATAAGAAAGAAAATTTAGTTAAAAT--ATTAAAGATCCACTATGTTATTTGATACATGTCAT-GATATCAAGGCTTAAAGTGCATTCACTCTCCAGTTCTTTAGGAAAGCCTCTAGTTTGCTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105234840 411 + 117903854 ATATATTTT-----GAGTTTACCAAATTACATCATAATGCATACCTATTGAGG--TAAATTGAATCTATTTCCAAAAGGTAATTTCTATGTAGTTAACATATATTATAAGTAC-----ACATATTTTTAAATGTAGAATAGTCAATACAAGTACCCACTGCCCAGAATGAGAACTAGA--AGAGTTTGGTTTTGTTTTTAATTAGCACAAATGGGAGTGCAAACTT---AAGGTTGTGACTGGAATAA------AATGTAATTTTATAAAGATACATTTTTACTATCCTAGACAGAAATATGCaaatataaagaaaaagaaaatgaatttatttaaaat--attaaaGATCCACTGTGTCATTTGATACATCTCAT-GACATCAAGGCTTAAAGTGCTTTCACTCTCCTATTCCTCAGGAAACCCTCTCCTTTGCTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428014 403 - 31320352 ATATATTTT-----GAGTTTACCAAATTACATCATAATTCACACCTATTGAGG--TAAATTGAAACTATTTCCAAAAGATAACTTCTATATAGTTAACATATATAATAAATAC-----GTATATTTTTAAATGTAGAATAGTCAATACAAGTACCCACTGCCCAGAATTAGAACTAGA--GGAGTTTGGTTTTGTTTTTAATTAGCATAAATGGGAGTGCAAACTT---AAGGTTGTGACTGAAATAA------AATGTAATTTTATAAAGATAAATTTTTACTATCCTAGAGAGAAATATGTAAATATAAAGAAAAAAA--------TTAGTTAAAAT--ATTAAGGATCCACTATGTCATTTGATACATCTCAT-GACATCAAGGCTTAAAGCGCTTTCACTCTCCTATTCCTTAGGAAACCCTCTCCTTTGCTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1623347 411 + 2203405 ATATATTTT-----GAGTTTACCAAATTATATCATAATGCATACCCATTGAGG--CAAATTGAATCTATTTCCAAAAGATAACTTCTATATAGTTAACATATATAATAAATAC-----ATATACTTTTAAGTGTAGAATATTCAATACAAGTACCCACTGCCCAGAATGAGAACTAGA--AGAGTTTGGTTTTGTTTTTAATTAGCATAAATGGGAGTGCAAATTT---AAGGTTGTGACTGGAATAA------AATGTAATTTTATAAAGATAAATTTTTACTATCCTAGACAGAAATATGCAAATATAAAGAAAAAGAAAAAAAGTCTAGTTAAAAT--ATTAAGGATCCACTATGTCATTTTATACATCTCAT-GACATCAAGGCTTAAAGTGCTTTCACTCTCCTATTCCTTAGGAAACCCTCTCTTTTGCTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3575549 411 - 14941987 ATATATTTT-----TAGTTTACCAAATTACATTACAATGCATACCTATTGAGG--TAAATTGAATCTATTTCCAAAAGATAACTTCtatatagttaacatatataataaatac-----atatatttttaaatgtaAAATAGTCAATACAAGTACCCACTGCCCAGAATGAGAACTAGA--AGAGTTTGGTTTTGTTTTTAATTAGCATAAATGGGAGTGCAAACTT---AAGGTTGTGACTGGAATAA------AATGTAATTTTATAAAGATAAATTTTTACTATCCTAGACAGAAATATGCAAATATAAAGAAAAAGAAAAAAAATTTAGTTAAAAT--ATTAAGGATCCACTATGTCATTTGATACATCTCAT-GACATCAAGGCTTAAAGTGCTTTCACTCTCCTATTCCTTAGGAAACCCTCTCCTTTGCTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11219232 313 - 20685099 ACACATTAT-----ACATTTACTGAATTATAGTATAATACATAACTGTTA----------CGGATCTA--TCTAAAGTAT---TTCTATATAGTTAATATTT--------TACATAAAATATTTTTTCA----------------------------------------------------------------------TATCTGCATAAAGGGGTTTGCAGAGGTAGAAGAAGAGTGGGTGGGAGAAGCCT--AATGTAC-TTTACAGACACAAATTGTTACTATCCTA------------TAAATGTAAAAAATAAAAAGGAAAAATTAGTTAAAATCAATTAAGAATCCACTATGTCATTTGATACAACTCAT-GACATCAAGGCT---------TTCACTCT-CAGATCCACAGGGGCTCCTCCACTTTACTT i otoGar3.GL873546 C 0 I 310 s dasNov3.JH575754 469756 354 - 2150887 ACATCTCTTAACAAAAGTTTAACAAATAACATTGCAATGCATGCCTATTGTGTAAAAAATGAGGTATATTTCTACAACAT---TTCTATAAAGTGAACATTTACC----------------------------TAGAAT-----------GTCCCCTCCACC-----------------------TTTTTTTTTTTTCAAATCAACACAAAAGATTATGCAGCGTT----ATGCCATGGAGGAGAGAAAACTT-AATGCat-tttaaaaaaataaattattattGTCCTAGACAGAAAC------ATATAAAGAAGATGAAAGGAAACTTAGTAAAAGTCAATTTAGGCTTCACTACTTCGTTTGATACTTTCCATCGATG----GTCCTAAAATGATCTCATTTTAAATTTCC--AGGGAAATCTCCAACTTCATT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e canFam3.chr1 112290825 3 - 122678785 I a score=101851.000000 s hg38.chr18_GL383571v1_alt 103721 11 + 198278 TACCTTCTTTC s panTro5.chr18 65008307 11 + 78221452 TACTTTCTTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64132563 11 + 77229886 TACCTTCTTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352382 11 + 17472758 TACCTTCTTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392484 11 - 152096393 TTCCTTCTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57341893 11 + 70235451 TTCCTTCTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033278 11 - 75711847 TTCCTTCTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13586047 11 - 18804593 TTCCTTCTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13202781 11 + 18905526 TTCCTTCTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60032708 11 - 72318688 TTCCTTCTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 366319 11 - 1517660 TTCCTTCTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3466393 11 + 6513552 TTCCTTCTTGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105235251 11 + 117903854 TTCCTTCTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428417 11 - 31320352 ATCCTTATTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1623758 11 + 2203405 TTCCTTATTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3575960 11 - 14941987 TTCCTTCTTTT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 470110 11 - 2150887 TTCGTTTTTTT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I a score=4455155.000000 s hg38.chr18_GL383571v1_alt 103732 478 + 198278 T--AAAAAATAGTTTGACCTGtttagattcaggggtatgtgtgcaggtttgttac--------attgtgtgatgctgaagtttgggatacaaatgaccgcatcccccaagcagtgagtatagtactcaatagctaatagctagcatttcaatccatgccccattacctctctcccctctctagtagtctgcagttatctattat---------------gtttatgagtgctcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttgtctgttcctgcattaatttgcttaggataatgg-cctccagc-tgcatccatgttgctgcaaagga-catga-tttcattctttactatggcttcatagtatttc-atggtg-tatatgtatcacatttctctatccaatcttctgttgatgggcacaag-ttgatggacactccatgtcttttctattgtgaatagtgctgcaatgaacatacaaatgcatctctctctc s panTro5.chr18 65008318 470 + 78221452 T--AAAAAATAGTTTGACCTGtttagattcaggggtatgtgtgcaggtttgttac--------attgtgtgatgctgaagtttgggatacaaatgaccgcatcccccaagcagtgagtatagtactcaatagctaatagctagcatttcaatccatgccccactacctctctcccctctctagtagtctgcagttatctattat---------------gtttatgagtgctcaatgtttagctcctgc-ttataagtgagaaca-cgtagcatttggttgtctgttcctgcattaatttgcttaggataatgg-cctccagc-tgcatccatgttgctgcaaagga-catga-tttcattctttactatggcttcatagtatttc-atggtg-tatatgtatcacatttctctatccaatcccctgttgatgggcacaag-ttgatggacactccatgtcttttctattgtgaatagtgctgcaatgaacatacaaatgca--------tc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64132574 478 + 77229886 T--AAAAAATAGTTTGACCTGtttagattcaggggtatgtgtgcaggtttgttac--------attgtgtgatgctgaagtttgggatacaaatgaccgcatcccccaagcagtgagtatagtactcaatagctaatagctaacatttcaatccatgccccactacctctctcccctctctagtagtctgcagttatctattat---------------gtttatgagtgctcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttgtctgttcctgcattaatttgcttaggataatgg-cctccagc-tgcatccatgttgctgcaaacga-catga-tttcattctttactatggcttcatagtatttc-atggtg-tatatgtatcacatttctctatccaatcctctgttgatgggcacaag-ttgatggacactccatgtcttttctattgtgaatagtgctgcaatgaacatacaaatgcatctctctctc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352393 478 + 17472758 T--AAAAAATAGTTTGACCTGtttagattcaggggtatgtgtgcaggtttgttac--------attgtgtgatgctgaagtttgggatacaaatgaccgcatcccccaagcagtgagtatagtactcaatagctaatagctagcatttcaatccatgccccactacctctctcccctctctagtagtctgcagttatctattat---------------gtttatgagtgctcaacgtttagctcctgc-ttataagtgagaaca-tgtaacatttggttgtctgttcctgcattaatttgcttaggataatgg-cctccagc-tgcatccatgttgctgcaaagga-catga-tttcattctttactatggcttcatagtatttc-atggtg-tatatgtatcacatttctctatccaatcctctgttgatgggcacaag-ttgatggacactccatgtcttttctattgtgaatagtgctgcaatgaacatacaaatgcatccctctctc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392495 471 - 152096393 T--AAAAAATAGTTTGACCTGtttagattcaggggtatgtgtgcaggtttgttac--------attgtgtgatgctgaagtttgggatacaaatgaccgcatcccccaagtagtgagtatagtactc-------aatagctagcatttcaatccatgccccactacctctctcccctctctagtagtccccagatatctattat---------------gtttatgagtgctcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttttctgttcctgcattaatttgcttaggataatgg-cctccagc-tgcatccatgttgctgcaaagga-catga-cttcattctttactatggcttcatagtatttt-atgttg-tatatgtatcacatttctctatccaatcctctgttgatgggcacaag-ttgatggacactccatgtcttttctattgtgaatggtgctgcaatgaacatacaaatgcatctctctctc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57341904 488 + 70235451 T--AAAAAATAGTTTGACCTGttcagattcaggggtatgtgtgcaggtttattac--------attgtgtgatgctgaaatttgggatacaaatgaccccgtaccccaagtagtgagtatagtactc-------aatagctagcatttcagtccatgccccactacctctctcccctctctagtagtccccagttatctattatgtttattatgttta-ggttatgaatgttcaacgtttagctcctgctttataagtgagaacattgtacgatttggttttctgttcctgcattaatttacttaggataatggccctctagcttgcatccatgttgctgcaaaggaccgtgattttcattctttactatggcttcatagtatttcaatggtgttatata-agcacatttctctatccaatcctctgttgatggacactagtttgatggacctcccatgtctttgctattgtgaatagg--cgcaacgaacatac-aatgc-tgtctc-ccc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033289 486 - 75711847 T--AAAAAATAGTTTGACCTGttcagattcaggggtatgtgtgcaggtttattac--------attgtgtgatgctgaaatttgggatacaaatgaccccgtcccccaagtagtgagtatagtactc-------aatagctagcatttcagtccatgccccactacctctctcccctctctagtagtccccagttatctattatgtttattatgtttatgtttatgaatgttcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttttctgttcctgcattaatttacttaggataatgg-cctctagc-tgcatccatgttgctgcaaagga-cgtga-tttcattctttactatggcttcatagtatttc-atggtg-tatatatagcacatttctctatccaatcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaacgaacatacaaatgcatgtctctctc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13586058 486 - 18804593 T--AAAAAATAGTTTGACCTGttcagattcaggggtatgtgtgcaggtttattac--------attgtgtgatgctgaaatttgggatacaaatgaccccgtaccccaagtagtgagtatagtactc-------aatagctagcatttcagtccatgccccactacctctctcccctctctagtagtccccagttatctattatgtttattatgtttatgtttatgaatgttcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttttctgttcctgcattaatttacttaggataatgg-cctctagc-tgcatccatgttgctgcaaagga-cgtga-tttcattctttactatggcttcatagtatttc-atggtg-tatatatagcacatttctctatccaatcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaacgaacatacaaatgcatgtctctctc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13202792 486 + 18905526 T--AAAAAATAGTTTGACCTGttcagattcaggggtatatgtgcaggtttattac--------attgtgtgatgctgaaatttgggatacaaatgaccccgtcccccaagtagtgagtatagtactc-------aatagctagcatttcagtccatgccccactacctctctcccctctctagcagtccccagttatctattatgtttattatgtttatgtttatgaatgctcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttttctgttcctgcattaatttgcttaggataatgg-cctctagc-tgcatccatgttgctgcaaagga-cgtga-tttcattctttactatggcttcatagtatttc-atggtg-tatatatagcacatttctctatccaatcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaacgaacatacaaatgcatgtctctctc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60032719 486 - 72318688 T--AAAAAATAGTTTGACCTGttcagattcaggggtatatgtgcaggtttgttac--------attgtgtgatgctgaaatttgggatacaaatgaccccgtcccccaagtagtgagtatagtactc-------aatagctagcatttcagtccatgccccactacctctctcccctctctagtagtccccagttacctattatgtttattatgtttatgtttatgaatgctcaatgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttttctgttcctgcattaatttacttaggataatgg-cctctagc-tgcatccacgttgctgcaaagga-cgtga-tttcattctttactatggcttcatagtatttc-atggtg-tatatatagcacatttctctatgcaatcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaacgaacatacagatgcatgtctctctc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 366330 486 - 1517660 T--AAAAAATAGTTTGACCTGttcagattcaggggtatatgtgcaggtttattac--------attgtgtgatgctgaaatttgggatacaaatgaccccgtcccccaagtagtgagtatagtactc-------aatagctagcatttcagtccatgccccactacctctctcccctctctagcagtccccagttatctattatgtttattatgtttatgtttatgaatgctcaacgtttagctcctgc-ttataagtgagaaca-tgtagcatttggttttctgttcctgcattaatttgcttaggataatgg-cctctagc-tgcatccatgttgctgcaaagga-cgtga-tttcattctttactatggcttcatagtatttc-atggtg-tatatatagcacatttctctatgcaatcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaacgaacatacaaatgcatgtctctctc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3466404 477 + 6513552 T--AAAAAATAGTTTGACGTGTTAagattcaggggtgtatgtgcaggtttgttac--------attgtgtgatgctgaagtttgggatacaaatgaccccatcccccaagtggtgagcatagtactc-------aatagctagcatttcagtccatgccccactacccctctcccctctctaggagtccccagttatctattatgtttat---------gtttatgaatgctcaacatttagctcctgc-ttatacgtgagaaca-tgtagcatttggttttctgttcctgcattaatttgcttaggataatgg-cctctaac-tgcatccatgttgctgtaaagga-cgtga-tttcattctttactatggcttcatagtatttc-atggtg-tatatatatcacatttctctatccaatcctctgttaatggacactag-ttgatggacactccatgtctttgctattgtgactagtgctgcaacgaacatacaaatgcatgtctctctc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105235262 474 + 117903854 T--AAAAAATAATTTGATCTGtttagattcaagggtatatgtgcaggtttgttacacgggtatattgtgtgatgctgaagtttgggatacaaatgaccccttcccctaagtagtgagcatagtactc-------aatagccatcatttcaaaccat-ccctgctacctctctcccctgtctagtagtacctagttatctattat---------------gtttatgagtgctcaatgtttagctcctgc-ttataaacgagaaca-catagcatttgtttttctgttcctgcattaattttcttaggatagtgg-tctctagc-tgcatccatgttgctgcgaagga-catga-tttcattctccactatggcttcatagtattcc-atgttg-catagataccacatttctctatcc-atcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaatgaacatacaaatgcatatgtct--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428428 476 - 31320352 T--AAAAAACAATTTGATCTGtttagattcaaggatatatgtgcaggtttgttacatgggtatattgtgtgatgctgaagtttgggatacaagtgacctcttcccctaattagtgagcacagtactc-------aatagccggaatttcaaaccat-ccctgctacctct-tcccctgtctagtagtacctagttatccattat---------------gcttatgagtgctcaatgtttagctcctgc-ttataaatgagaaca-catagcatttgtttttctgttcctgcattaattttcttaggataatag-tctctagc-tgcatccatgttgctgcaaagga-catga-tttcattcttcattatggcttcatagtattcc-atgttg-catagatatcacatttctctatcc-atcctctgttgacggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaataaacatacaaatgcatatgtctttt i saiBol1.JH378121 C 0 I 28 s cebCap1.NW_016107689v1 1623769 476 + 2203405 A--AAAAAATAATTTGGTCCAtttagattcaaggatatatgtgcaggtttgttacatgggtatattgtgtgatgctgaagtttgggatacaaatgaccccttcccctaagtagtgagcacagtactc-------cataaccagaatttcaaaccat-ccctgctacctct-ctccctgtctagtagtacctagttatctattat---------------gtttatgagtgctcaatgtttagctcttgc-ttatgaatgagaaca-catagcatttgtttttctgttcctgcattaattttcttaggataatgg-tttctagc-tgcatccatgttgctgcaaagga-catga-tttcatttttcagtatggcttcatagtattcc-atgttg-catacatatcacatttctctatcc-atcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaataaacatacaaatgcatatgtctttt i cebCap1.NW_016107689v1 C 0 I 2 s aotNan1.NW_018502140v1 3575971 479 - 14941987 TAAAAAAAATAATTTGATCTCtttagattcaagggtatatgtgcaagtttgttacatgggtatattgtgtgatgctgaagtttgggatacaaatgaccccctctcctaagtagtgagcatagtactc-------aatagccagcatttcaaaccat-ccctgctacctctctcccctgtctagtagtacctagttatctattat---------------gtttatgagtgctcaatgtttggctcctgc-ttataaatgagaaca-catagcatttgtttttctgttcctgcattaagtttcttacgataatgg-tctctagc-tgcatccatgttgctgcaaagga-catga-tttaattcttcactatgggttcatagtattcc-atgttc-catagatatcacatttctctatcc-atcctctgttgatggacactag-ttgatggacactccatgtctttgctattgtgaatagtgctgcaatgagcatacaaatgcatatgtctttt i aotNan1.NW_018502140v1 C 0 I 2 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I a score=20364.000000 s hg38.chr18_GL383571v1_alt 104210 11 + 198278 tctctctctc---t s panTro5.chr18 65008788 11 + 78221452 tctctctctc---t i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133052 11 + 77229886 tctctctctc---t i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352871 11 + 17472758 tctctctctc---t i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392966 11 - 152096393 tctccatata---t i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342392 14 + 70235451 tctttctctctctt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033775 11 - 75711847 tctttctctc---t i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13586544 11 - 18804593 tctttctctc---t i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13203278 11 + 18905526 tctttctctc---t i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60033205 10 - 72318688 tctttctctc---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 366816 11 - 1517660 tctttctctc---t i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3466881 11 + 6513552 tCTTTCTCTC---T i colAng1.NW_012115433v1 C 0 I 5831 s cebCap1.NW_016107689v1 1624247 9 + 2203405 tggtgcaat----- i cebCap1.NW_016107689v1 I 2 I 6 s aotNan1.NW_018502140v1 3576452 9 - 14941987 tggtgcaat----- i aotNan1.NW_018502140v1 I 2 I 6 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105235736 0 + 117903854 C e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e saiBol1.JH378121 19428904 28 - 31320352 I a score=26577.000000 s hg38.chr18_GL383571v1_alt 104221 8 + 198278 ctctctct s panTro5.chr18 65008799 8 + 78221452 ctctctct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133063 8 + 77229886 ctctctct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352882 8 + 17472758 ctctctct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392977 8 - 152096393 atgtatat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342406 8 + 70235451 ctctctct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033786 8 - 75711847 ctctctct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13586555 8 - 18804593 ctctctct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13203289 8 + 18905526 ctctctct i cerAty1.NW_012001075v1 C 0 I 55 s manLeu1.NW_012106698v1 366827 8 - 1517660 ctctctct i manLeu1.NW_012106698v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105235736 0 + 117903854 C e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3576461 6 - 14941987 I e cebCap1.NW_016107689v1 1624256 6 + 2203405 I e saiBol1.JH378121 19428904 28 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e chlSab2.chr18 60033215 0 - 72318688 C a score=-665.000000 s hg38.chr18_GL383571v1_alt 104229 6 + 198278 cctctc s panTro5.chr18 65008807 6 + 78221452 cctctc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133071 6 + 77229886 cctctc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352890 4 + 17472758 c--ctc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392985 3 - 152096393 ---ata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342414 5 + 70235451 -ctctc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033794 5 - 75711847 -ctcta i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13586563 5 - 18804593 -ctaca i macNem1.NW_012016688v1 C 0 I 1 s manLeu1.NW_012106698v1 366835 5 - 1517660 -ctaca i manLeu1.NW_012106698v1 C 0 I 36 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105235736 0 + 117903854 C e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3576461 6 - 14941987 I e cebCap1.NW_016107689v1 1624256 6 + 2203405 I e saiBol1.JH378121 19428904 28 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e chlSab2.chr18 60033215 0 - 72318688 C e cerAty1.NW_012001075v1 13203297 55 + 18905526 I a score=-2724.000000 s hg38.chr18_GL383571v1_alt 104235 6 + 198278 ------------tctctc s panTro5.chr18 65008813 6 + 78221452 ------------tctctc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133077 6 + 77229886 ------------tctctc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352894 6 + 17472758 ------------tctctc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392988 6 - 152096393 ------------tatata i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63033800 6 - 75711847 ------------acacac i macFas5.chr18 I 1 I 9 s macNem1.NW_012016688v1 13586569 6 - 18804593 ------------acacac i macNem1.NW_012016688v1 I 1 I 35 s chlSab2.chr18 60033215 6 - 72318688 ------------tctctc i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105235736 16 + 117903854 tttgatggtgcaattc-- i calJac3.chr13 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3576461 6 - 14941987 I e cebCap1.NW_016107689v1 1624256 6 + 2203405 I e saiBol1.JH378121 19428904 28 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e rheMac8.chr18 57342419 0 + 70235451 C a score=105.000000 s hg38.chr18_GL383571v1_alt 104241 3 + 198278 -tct s panTro5.chr18 65008819 3 + 78221452 -tct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133083 3 + 77229886 -tct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352900 3 + 17472758 -tct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392994 3 - 152096393 -tat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342419 3 + 70235451 -tct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033815 3 - 75711847 -cac i macFas5.chr18 I 9 C 0 s chlSab2.chr18 60033221 3 - 72318688 -tct i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105235752 3 + 117903854 att- i calJac3.chr13 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3576461 6 - 14941987 I e cebCap1.NW_016107689v1 1624256 6 + 2203405 I e saiBol1.JH378121 19428904 28 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e macNem1.NW_012016688v1 13586575 35 - 18804593 I a score=2225.000000 s hg38.chr18_GL383571v1_alt 104244 7 + 198278 atatata s panTro5.chr18 65008822 7 + 78221452 ctatata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133086 7 + 77229886 gtatata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352903 7 + 17472758 atatata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139392997 7 - 152096393 atacaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342422 7 + 70235451 acacaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033818 7 - 75711847 acacaca i macFas5.chr18 C 0 C 0 s chlSab2.chr18 60033224 7 - 72318688 acacaca i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105235755 3 + 117903854 tta---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428932 1 - 31320352 --a---- i saiBol1.JH378121 I 28 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3576461 6 - 14941987 I e cebCap1.NW_016107689v1 1624256 6 + 2203405 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e macNem1.NW_012016688v1 13586575 35 - 18804593 I a score=3584.000000 s hg38.chr18_GL383571v1_alt 104251 2 + 198278 tg s panTro5.chr18 65008829 2 + 78221452 tg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133093 2 + 77229886 tg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352910 2 + 17472758 ta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139393004 2 - 152096393 ca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342429 2 + 70235451 ca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63033825 2 - 75711847 ca i macFas5.chr18 C 0 C 0 s chlSab2.chr18 60033231 2 - 72318688 ca i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105235758 2 + 117903854 ca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428933 2 - 31320352 ca i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3576467 2 - 14941987 ta i aotNan1.NW_018502140v1 I 6 I 2 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e cebCap1.NW_016107689v1 1624256 6 + 2203405 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e macNem1.NW_012016688v1 13586575 35 - 18804593 I a score=106621.000000 s hg38.chr18_GL383571v1_alt 104253 22 + 198278 tacatacaaacaca-------------cacaaaca s panTro5.chr18 65008831 22 + 78221452 tacatacacacaca-------------cacaaaca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133095 22 + 77229886 tacatacacacaca-------------cacaaaca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352912 22 + 17472758 tacatacacacaca-------------cacaaaca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139393006 22 - 152096393 cacacacacacaca-------------cacaaaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342431 22 + 70235451 cacacacacacaca-------------cacacaca i rheMac8.chr18 C 0 I 8 s macFas5.chr18 63033827 22 - 75711847 cacacacacacaca-------------cacacaca i macFas5.chr18 C 0 I 2 s chlSab2.chr18 60033233 22 - 72318688 cacacacacacaca-------------cacacaga i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105235760 22 + 117903854 cacacacacacaca-------------cacacaca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428935 35 - 31320352 cacacacacacacacacacacacacaccacacaca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1624262 22 + 2203405 tacacacacacaca-------------cacacaca i cebCap1.NW_016107689v1 I 6 C 0 s aotNan1.NW_018502140v1 3576471 22 - 14941987 cacacacacacaca-------------cacacaga i aotNan1.NW_018502140v1 I 2 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e macNem1.NW_012016688v1 13586575 35 - 18804593 I a score=-4005.000000 s hg38.chr18_GL383571v1_alt 104275 4 + 198278 atat s panTro5.chr18 65008853 4 + 78221452 gtat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133117 4 + 77229886 gtat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352934 4 + 17472758 gtat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139393028 4 - 152096393 gtat i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63033851 2 - 75711847 gt-- i macFas5.chr18 I 2 I 2 s chlSab2.chr18 60033255 2 - 72318688 gt-- i chlSab2.chr18 C 0 I 2 s calJac3.chr13 105235782 2 + 117903854 gc-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428970 2 - 31320352 gt-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1624284 2 + 2203405 gt-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3576493 2 - 14941987 gt-- i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e macNem1.NW_012016688v1 13586575 35 - 18804593 I e rheMac8.chr18 57342453 8 + 70235451 I a score=910.000000 s hg38.chr18_GL383571v1_alt 104279 1 + 198278 t s panTro5.chr18 65008857 1 + 78221452 t i panTro5.chr18 C 0 C 0 s panPan2.chr18 64133121 1 + 77229886 t i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352938 1 + 17472758 t i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139393032 1 - 152096393 t i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105235784 0 + 117903854 C e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3576495 0 - 14941987 C e cebCap1.NW_016107689v1 1624286 0 + 2203405 C e saiBol1.JH378121 19428972 0 - 31320352 C e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 366840 36 - 1517660 I e chlSab2.chr18 60033257 2 - 72318688 I e cerAty1.NW_012001075v1 13203297 55 + 18905526 I e macNem1.NW_012016688v1 13586575 35 - 18804593 I e macFas5.chr18 63033853 2 - 75711847 I e rheMac8.chr18 57342453 8 + 70235451 I a score=9028560.000000 s hg38.chr18_GL383571v1_alt 104280 1074 + 198278 gagattgagattgctgggtcgaatggtagctctaagttctttgagaagtatccaaactgcttttcacagtggctgaattgatttacatttccactaacagtaaataagcattccccttttataacagagccttgccagcatctgttattttttgactttttaattgtagccgttctgactggtgtgagatggtatctcatt-tggtttagatttgcatttctctgatggttaccaatgatgagcattttttcatgtttgttggctatgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tt----gtt-----tttgcttgttgaattgtttaaattctttatagagtatggataatggacctttgtcagttcatagtttgcaaatattttctcctattctgtaagttgtctatttactctgtcgttagcttttttagctgtgcagaagctctttagcttaattaggtctcacttgtcaatttttgtttatgttgcaattgtttttgaggacttaatcataaattctttaccaaggctgagtctagaacggtgtttcctagattatcttttaggattcttataatttgaagaccaacatttaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttattgaatagtgagtcatttcccaattgcttattgttgtcaactttgtgaaggtcagatggctgtgggtgtgaagctatatttctgggttctctattctctgtcctgttccattggtatatgtgtctgttttt-atgccagtacaatgctgttttggttatactgtggtttgtttatagtacagttggaagtca-gtaatgtaatttctctgactttgttcttcttgcttcagattgcttttgctgttcggactcttttttgattccatactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaata-ctttgaaactgtagatagccttgggaagtatggtcatttga s panTro5.chr18 65008858 1074 + 78221452 gagattgagattgctgggtcgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattgatttacatttccactaacagtaaataagcattccccttttataacagagccttgccagcatctgttattttttgactttttaattatagccgttctgactggtgtgagatggtatctcatt-tggtttagatttgcatttctctgatggttaccaatgatgagcattttttcatgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tt----gtt-----tttgcttgttgaattgtttaaattctttatagagtatggataatggacctttgtcagttcatagtttgcaaatattttctcctattctgtaagttgtctatttactctgtcgttagcttttttagctgtgcagaagctctttagcttaattaggtctcacttgtcaatttttgtttatgttgcaattgtttttgaggacttaatcataaattctttaccaaggctgagtctagaacggtgtttcctagattatcttttaggattcttataatttgaagaccgacatttaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttattgaatagtgagtcatttcccaattgcttattgttgtcaactttgtgaaggtcagatggctgtgggtgtgaagctatatttctgggttctctattctctgtcctgttccactggtatatgtgtctgttttt-atgccagtacaatgctgttttggttatactgtggtttgtttatagtacagttggaagtca-gtaatgtaatttctctgactttgttcttcttgcttcagattgcttttgctgttcggactcttttttgattccatactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaata-ctttgaaactgtagatagccttgggaagtatggtcatttGA i panTro5.chr18 C 0 I 7936 s panPan2.chr18 64133122 1074 + 77229886 gagattgagattgctgggtcgaatggtagctctaaattctttgagaagtctccaaactgcttttcacagtggctgaattgatttacatttccactaacagtaaataagcattccccttttataacagagccttgccagcatctgttattttttgactttttaattatagccgttctgactggtgtgagatggtatctcatt-tggtttagatttgcatttctctgatggttaccaatgatgagcattttttcatgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tt----gtt-----tttgcttgttgaattgtttaaattctttatagagtatggataatggacctttgtcagttcatagtttgcaaatattttctcctattctgtaagttgtctatttactctgtcgctagcttttttagctgtgcagaagctctttagcttaattaggtctcacttgtcaatttttgtttatgttgcaattgtttttgaggacttaatcataaattctttaccaaggctgagtctagaacggtgtttcctagattatcttttaggattcttataatttgaagaccgacatttaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttattgaatagtgagtcatttcccaattgcttattgttgtcaactttgtgaaggtcagatggctgtgggtgtgaagctatatttctgggttctctattctctgtcctgttccattggtatatgtgtctgttttt-atgccagtacaatgctgttttggttatactgtggtttgtttatagtacagttggaagtca-gtaatgtaatttctctgactttgttcttcttgcttcagattgcttttgctgttcggactcttttttgattccatactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaata-ctttgaaactgtagatagccttgggaagtatggtcatttga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5352939 1074 + 17472758 gagattgagattgctgggtcgaatggtagctctaagttctttgagaagtctccaaattgcttttcacagtggctgaattgatttacatttccactaacagtaaataagcattccccttttataacagagccttgccagcatctgttattttttgactttttaattatagccgttctgactggtgtgagatggtatctcatt-tggtttagatttgcatttctctgatggttaccaatgatgagcattttttcatgtttgttggctgtgagtaggacttcttttgagaaatatctgttcatatcttttgctcactttgaatgaga-tt----gtt-----tttgcttgttgaattgtttaaattctttatagagtatggataatggacctttgtcagttcatagtttgcaaatattttctgctattctgtaagttgtctatttactctgtcgttagcttttttagctgtgcagaagctctttagcttaattaggtctcacttgtcaatttttgtttatgttgcaattgtttttgaggacttaatcataaattctttaccaaggctgagtctagaacggtgtttcctagattatcttttaggattcttgtaatttgaagaccgacatttaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttattgaatagtgagtcatttcccaattgcttatttttgtcaactttgtgaaggtcagatggctgtgggtgtgaagctatatttctgggttctctattctctatcctgttccattggtatatgtgtctgttttt-atgccagtacaatgctgttttggttatactgtggtttgtttatagtacagttggaagtca-gtaatgtaatttctctgactttgtttttcttgcttcagattgcttttgctgttcggactcttttttgattccatactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaata-ctttgaaactgtagatagccttgggaagtatggtcatttga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139393033 1074 - 152096393 gagattgagattgctgggttgaatggtagctctgagttctttgagaagtctccaaactgcttttcacagtggctgaattgatttacatttccactaacagtaaataagcattccccttttataacagagccttgtcagcatctgttattttttgactttttaattatagccgttctgactggtgtgagatggtatctcattgtggtttagatttgcatttctctgatggttaccaatgacgagcattttttcatgtttgttggctgtgagtaggacatcttttgagaaggatctgttcatatcttttgctcactttgaatgaga-tt----gtt-----tttgcttgttgaattgtttaaattctttatagagtatggatagtggacctttgtcagttcatagtttgcaaatagtttctcctattctataggttgtctatttactctgtcgttagcttttttagctgtgcagaaggtctttagcttaattaggtctcacttttc-atttttgtttatgttgcaattgtttttgaagacttaatcataaattctttaccaaggctgagtctagaacggtgtttcctagattatcttttaggattcttataatttgaagacttacatttaaatctttaatccatcttgagttaattttggtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttatcgaatagtgaatcatttccctattgcttatttttgtcaactttgtgaaggtcagatggctgtgggtgtgaagctatatttctgggttctcaattctctatcctgttccattggcatatgtgtctgttttt-acgccagtacaatgctgttttggttatactatggtttgtttatagtacagttggaagtca-gtaatgtaatttctctggctttgttcttcttgcttcagattgcttttgctgttcgggctcttttttgattccatactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaata-ctttggaactgtagatagccttgggaagtatggtcatttga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57342461 1069 + 70235451 gagattgagattgctgggctgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattaatttacatttccactaacaataaataagcattccctttttgcgtc--agccttgccagcatctgctattttttgactttttaattatagccgttctgactggtatgagatggtttctcattgtggtttagatttgtgtttctctgacggttaccaatgacaagtattttttcacgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tt----ttt-----tttgcttgttgaattgtttaagttctttacagagtatggatagtggacctttgtcagttcatagtttgctaatattttctcccattctgtacgttgtctatttactctatcgttagattttttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgcaattgtttctgaggacttaatcataaattgtttaccaaggctgagtctataacagtgtttcgtagattatcttttaggattcttatagtttgaagacttatattgaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttactgaatagtgag-----tcccaattgcttatttttgtcaactttgtgaaggtcagatggacgtgggtgtgaagctatatttctgggttctctattctctattctgttccattggtctatgtgtctgttttt-atgccagtacaatgctgttttggttatactatggtttgtttatagtacagttggaagtca-gtaatgtaatttctccagctttgttctttttgcttcagattgcttttgctgttcgggctcttttttgattccctactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaatagctttgaaactgtagatagccttgggaagtatggtcatttga i rheMac8.chr18 I 8 C 0 s macFas5.chr18 63033855 1069 - 75711847 gagattgagattgctgggctgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattaatttacatttccactaacaataaataagcattccctttttgcgtc--agccttgccagcatctgttattttttgactttttaattatagccgttctgactggtatgagatggtttctcattgtggtttagatttgtgtttctctgacggttaccaatgacaagtattttttcacgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tt----ttt-----tttgcttgttgaattgtttaagttctttacagagtatggatagtggacctttgtcagttcatagtttgctaatattttctcccattctgtacgttgtctatttactctatcgttagattttttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgcaattgtttctgaggacttaatcataaattgtttaccaaggctgagtctataacagtgtttcgtagattatcttttaggattcttatagtttgaagacttatattgaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttactgaatagtgag-----tcccaattgcttatttttgtcaactttgtgaaggtcagatggacgtgggtgtgaagctatatttctgggttctctattctctattctgttccattggtctatgtgtctgttttt-atgccagtaccatgctgttttggttatactatggtttgtttatagtacagttggaagtca-gtaatgtaatttctccagctttgttctttttgcttcagattgcttttgctgttcgggctcttttttgattccctactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaatagctttgaaactgtagatagccttgggaagtatggtcatttga i macFas5.chr18 I 2 C 0 s macNem1.NW_012016688v1 13586610 1069 - 18804593 gagattgagattgctgggctgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattaatttacatttccactaacaataaataagcattccctttttgcgtc--agccttgccagcatctgttattttttgactttttaattatagccgttctgactggtatgagatggtttctcattgtggtttagatttgtgtttctctgacggttaccaatgacaagtattttttcacgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tt----ttt-----tttgcttgttgaattgtttaagttctttacagagtatggatagtggacctttgtcagttcatagtttgctaatattttctcccattctgtacgttgtctatttactctatcgttagattttttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgcaattgtttctgaggacttaatcataaattgtttaccaaggctgagtctataacagtgtttcgtagattatcttttaggattcttatagtttgaagacttatattgaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------agcatatggctagccagctgtaccagcaccatttactgaatagtgag-----tcccaattgcttatttttgtcaactttgtgaaggtcagatggacgtgggtgtgaagctatatttctgggttctctattctctattctgttccattggtctatgtgtctgttttt-atgccagtacaatgctgttttggttatactatggtttgtttatagtacagttggaagtca-gtaatgtaatttctccagctttgttctttttgcttcagattgcttttgctgttcgggctcttttttgattccctactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaatagctttgaaactgtagatagccttgggaagtatggtcatttga i macNem1.NW_012016688v1 I 35 C 0 s cerAty1.NW_012001075v1 13203352 1071 + 18905526 gagattgagattgctgggctgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattaatttacatttctgctaacagtaaataagcattccctttttgcgtc--agccttgtcagcatctgttattttttgactttttaattatagccgttctgactggtatgagatggtttctcattgtggtttagatttgcgtttctctgacggttaccaatgacaagcattttttcatgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgggattt----ttt-----tttgcttgttgaa----ttaagttatttacagagtatggatagtggacctttgtcagttcatagtttgctaatattttctcccattctgtaggttgtctatttactctatcgttagtttctttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttctgtttatgttgcaattgtttttgaggacttaatcataaattgtttaccaaggctgagtctagaacagtgtttcgtagattatcttttaggattcttatagtttgaagacttatattgaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttactgaatagtgagtcatttcccaattgcttatttttgtcaactttgtgaaggtcagatggacgtgggtgtgaagctatatttctgggttctctattctctattctgttccattggtctatgtgtctgttttt-atgccagtacaatgctgttttggttatactatggtttgtttatagtgcagttggaagtca-gtaatgtaatttctccagctttgttctttttgcttcagattgcttttgctgttcgggctcttttttgattccctactagtttcagaattgcttttcctaattctgagaaaaataaagttggtagtttgatagaaatagctttgaaactgtagatagccttgggaagtacggtcatttga i cerAty1.NW_012001075v1 I 55 C 0 s chlSab2.chr18 60033259 1070 - 72318688 gagattgagattgctgggctgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattaatttaaatttctgctaacagtaaataagcattccctttttgcgtc--agccttgccagcatctgttattttttgactttttaattatagccgttctgactggtatgagatggtttctcattgtggtttagatttgcgtttctctgacggttaccaatggcaagcattttttcatgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatgaga-tg----ttt-----tttgcttgttgaa----ttaagttctttacagagtatggattgtggacctttgtaagttcatagtttgctaatattttctcccattctgtaggttgtctatttactctatcgttagtttctttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgcaattgtttttgaggacttaatcataaattgtttaccaaggctgagtctagaacagtgtttcgtagattatcttttaggattcttatagtttgaagacttatattgaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttattgaatagtgagttatttcccaattgcttatttttgtcaactttgtgaaggtcagatggacgtgggtgtgaagctatatttctgggttctctattctctattctgttccattggtctatgtgtctgttttt-atgccagtacaatgctgttttggttatactatggtttgtttatagtacagttggaagtca-gtaatgtgatttctccagttttgttctttttgcttcagactgcttttgctgttcgggctcttttttgattccctactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaatagctttgaaactgtagatagccttgggaagtattgtcatttga i chlSab2.chr18 I 2 C 0 s manLeu1.NW_012106698v1 366876 1070 - 1517660 gagattgagattgctgggctgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggctgaattaatttacatttctgctaacagtaaataagctttccctttttgcgtc--agccttgtcagcatctgttattttttgactttttaattatagccgttctgactggtatgagatggtttctcattgtggtttagatttgcatttctctgacggttaccaatgacaagcattttttcatgtttgttggctgtgagtaggacttcttttgagaagtatctgttcatatcttttgctcactttgaatggga-tt----ttt-----tttgcttgttgaa----ttaagttatttacagagtatggatagtggacctttgtcagttcatagtttgctaatattttctcccattctgtaggttgtctatttactctatcgttagtttctttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttctgtttatgttgcaattgtttttgaggacttaatcataaattgtttaccaaggctgagtctagaacagtgtttcgtagattatcttttaggattcttatagtttgaagacttatattgaaatctttaatccatcttgagttaatttttgtatgtggtgaaaggtaagggtcc-------------tgcatatggctagccagctgtaccagcaccatttactgaatagtgagtcatttcccaattgcttatttttgtcaactttgtgaaggtcagatggacgtgggtgtgaagctatatttctgggttctctattctctattctgttccattggtctatgtgtctgttttt-atgccagtacaatgctgttttggttatactatggtttgtttatagtgcagttggaagtca-gtaatgtaatttctccagctttgttctttttgcttcagattgcttttgctgtttgggctcttttttgattccctactagtttcagaattgcttttcctaattctgtgaaaaataaagttggtagtttgatagaaatagctttgaaactgtagatagccttgggaagtatggtcatttga i manLeu1.NW_012106698v1 I 36 C 0 s calJac3.chr13 105235784 1075 + 117903854 ---aatgagattgctggatcaaatggtaggtataagttctttgagaagtctccaaactgctttccacagtggcctaattgatttacatttccactaacagtaaataagtgttccctttttgctgc--aaccttgccagcatctggtgttttttgactttttaattataggtattctacctgatgtgagctggtatctcattgtggtttagatttgcatttctctgatggttatcgatgatgagcatttctcaacatatgttggctaagagtatgacttcttttgagaactatctgttcacgtcttttgctcactttgagtaaga-tt----tttgtttgtttgtttgttgaattgtttaagttccttatagagtgtggatgttggacatttgtcagttcatagtttgcaaaaactttctgccattccgtatgctgcatatttactctgtggttaatttcttcatctgtgcagaagctctttagtttacttaggtctcatttgtcaatttttgtttatgttgcaattgtttttgagaacttaatcataaattctttaccaaggctgattccagaatagtgttttctagattatcttttaggatacttatagtttaaagtcttacagttaaatctttaatccatc-----ttaatttctgtatgtggtgaaaggtaaggatccatatttgttttcctgcatatggccagtcagctgtaccagcaccatgtattcaatagcgagtcatttcccaattgctgatttttgtcagctttgtgaaggtcagatggccacgggtgtggagctatatttctgggttctctatg-------ctgtttcattggtctatgtgtctgttttt-atgcc--tacaatgctgttttggttatagtatggtttgggtatagtacaactggaagtcaggtaatgtgatttctccagctttgttctttttgcttcagatt-cctttgctattcaggctcttttttgattctatacttgttttagcactgtttttcctaattctgtgaaaaataaagttggtagttttacaggaatagctttgaaactgtagatagccttgggaagtatggccatttta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19428972 1077 - 31320352 ---aacgagattgctgggtcgaatggtagctctaagttatttgagaagtctccaaactgtttttcacattggctgaattgatttacatttcctctaacagtaaataactgttccctttttgctgc--aaccttgccagcatctggtgttttctgactttttaattataggtattctgcctgatgtgagctggtatctcattgtggtttagatttgcatttctctgatgattatcaatgatgagtacttttccacatttgttggctaagagtatgacttcttttgagaagtatctgttcatgtcttttgctcactttgagtgaga-tt----tttgtttgtttgtgtgttgaattgtttaagttccttatagagtagggatgctggacctttgtcagttcacagtttgcaaaaactttctcccattccgtaggttgtctatttactctgtggttaatttctttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgaaattgtttttgaggacttaatcataaattctttaccaaggctgattccagtatggtgttttctagattatcttttaggatacttacagtttgaagtcttatagttaaatcttaaatccatc-----ttaatttttgtatgtggtgaaaggtaaaggtccatatttgttttcttgcatatggccagtcagctgtact-gcaccatttattgaatagtgagtcatttcccaattgcttatttttgtcaactttgtgaaggtcagatggccacgggtgtggagctgtatttctgggttctctacg-------ctgttccattggtctatgtgtctgttttc-atgccagtacaatgctgttttggttatactatggtttgggtatagtacaactggaagtcaggtaatgtgatttctccaggtttgttctttttgcttcagattgcttttgctattcagcctcttttttgattccatacttgttttaaaattgtttttcctaattctgtgaaaaataaagttggtagttttataggaatagctttgaaaccatagatggccttgggaaatatggccatttta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1624286 1082 + 2203405 ---aatgagattgctcggttgaatggtagctctaagttctttgagaagtctccaaactgcttttcacagtggct-aattgatttacatttccactaacagtaaataagtgttccctttttgctgc--aaccttgcaagcatctggtgttttctgactttttaattataggtattctgcctgatatgagctggtatctcattgtggtttagatttacatttctctgatgggtatcaatgatgagtatttttccacatttgttggctaagagtatgacttcttttgagaagtatctgttcatgtcttttgctcactttgagtgaga-tttttgtttgtttgtttgtttgttgaattgtttaagttcctcatagagtatggatgttggacctttgtcagttcatagtttgcaaaaactgtctcccattctgtaggctgtctgtttactctgtggttaatttctttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgaaattgtttttgagggcctaatcataaattctttaccaaggctgattccagaatggtgttttctagattatcttttaggatacttacagtttgaagtcttacagttaaatctttaatccatc-----ctaatttttgtatgtggtgaaaggtaagggtccatatttgttttcctgccattggccagtcagctgtaccagcatcatttattgaatagtgagtcattttccaattgcttatttttgtcaactttgtgaaggtcagatggccgcgggtgtggagctatatttctgggttccctatg-------ctgttctattggtctatgtgcctgtttttaatgccagtacaatgctgtttggattatagtgtggtttgggtatagtacaactggaagtcaggtaatgtgatttctccagctttgttctttttgcttcagattgcttttgctattcgggctcttttttgattccatacttgttttagaactgtttttcctaattctgtgaaaaataaagttggtagttttataggaatagctttgaaaccgtacatagccttgggaaatatggccatttta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3576495 1068 - 14941987 ---aatgagattgctgggttgaatggtagctttaagttctttgagaagtctccaaactgcttttcacagtggccaaattgatttacattgccactaacagtaaataagtgttccctttttgctgc--aaccttgccagcatctggtgttttttgactttttaactataggtattctgcctgatgtgagctggtatctcattgtggtttagatttgcatttctctgatggttatcggtgatgagcatttttccacatttgttggctaagagtatgacttcttttgagaattatctgttcatgtcttttgctcactttgagtgaga-------tttgtttgtttgtttgttgaa----ttaagttccttatagagtatggatgttggacctttgtcagttcatagtttgcaaaaactttctcccattccgtaggttgtctatttactctgtggttaatttatttagctgtgcagaagctctttagtttaattaggtctcatttgtcaatttttgtttatgttgcaattgtttttgaggacttaatcataaattctttaccaaggctgattccagaatggtgttttctagattatcttttaggatacttatagtttgaagtcttatagttaaatctttaatccatc-----ttaatttttttatgtggtgaaaggtaagggtccatatttgttttcctgcatatggccagtcagctgtaccagcaccatttattgaatagcaagtcatttcccaattgcttatttttgtcaactttgtgaaggtcagatggccgcgggtgtggagctacatttctgggttctctatg-------ctgttccattggtctatgtgtctgtttct-atgccagtacaatgctgttttggttatactatggtttgggtatagtacaattggaagtcaggtaatatgatttctccagctttgttctttttgcttcagattgcttttgctattcgaggtcttttttgattccatacttgttttagaactgtttttcctaattctgtgaa----aaagttggtagtttcataggaataactttgaaactgtagatagccttgggaagtatggccatttta i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I a score=2833193.000000 s hg38.chr18_GL383571v1_alt 105354 412 + 198278 atgacactgattcttccaatacatgagcgtggaa---ttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcacagaagtctttcatctccttgcttgatgtagttctaggtatttta-tttttatgtgggattacatttttgatttggctc---------------------------------------------------------------tcagcttgaatgttattgttgtatataaatgctgttgatttgtgtacaatatttttgtatcctgaaaaattactgaagacatttatcagtaccagtagccttttggtggagtctttagggttttctaggtgtagaatc-----agc----aaaaaaaaagagatagtttgactc--tttttttttttttttttctatgtggatcccttttctttgtttctcctgcctgactcctctggctaggacttct s panPan2.chr18 64134196 408 + 77229886 atgacactgattcttccaatacatgagcatggaa---ttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcacagaagtctttcatctccttgcttgatgtagttctaggtatttta-tttttatgtgggattacatttttgatttggctc---------------------------------------------------------------tcagcttgaatgttattgttatatataaatgctgttgatttgtgtacaatatttttgtatcctgaagaattactgaagacatttatcagtaccagtagccttttggtggagtctttagggttttctaggtgtagaatc-----agc----aaaaaaaaagagatagtttgactc------tttttttttttttctatgtggatcccttttctttgtttctcctgcctgattcctctggctaggacttct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5354013 406 + 17472758 atgacactgattcttccaatacatgagcgtggaa----tttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttttcctcacagaagtctttcatctccttgcttgatgtagttctaggtatttta-tttttatgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgttattgttgtatataaatgctgttgatttgtgtacaatatttttgtatcctgaaaaattactgaagacatttatcagtaccagtagccttttggtggagtctttagggttttctaggtgtagaatc-----agc-----aaaaaaaagagatagtttgactc------tttttttttttttctatgtggatcccttttctttgtttctcctgcctgattcctctggctaggatttct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139394107 410 - 152096393 atgagactgattcttccaatacatgagcatggaa---ttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcacagaagtctttcatctctttgtttgatgtagttctaggtttttta-tttttttgtgggattgcatttttgatttggctt---------------------------------------------------------------tcagcttgaatgttattgttgtatataaatgctattgatttgtgtccaatatttttgtatcctgaaaaattactgaagacatttatcagtaccagtagccttttggtggagtctttagagttttctaggtgtacaatc-----agcaaaaaaaaaaaaaaagataatttgactc--------tttttttatttctatgtggatcccttttctttctttctcctgcctgattcctctggctaggacttct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57343530 418 + 70235451 atgacactgattcttccaatacatgagcatggcatttttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcactgaagtctttcatctccttgtttgatgtacttctaggtatttta-tttttttgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgctatcattgcatataaatgctattgatttgtgtataatatttttgtatcctgaaaaactactgaagacatttatcggtaccggtagccctttggtggagtctttagggttttctaggtgtagaatcttattatc-----agcaaaaaaagatagtttgactc--tttttttttttttttttctacgtggatcccttttctttccc-cccctgcctgagtcctctgactaggtcttct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63034924 419 - 75711847 atgacactgattcttccaatacatgagcatggcatttttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcactgaagtctttcatctccttgtttgatgtacttctaggtatttta-tttttttgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgctatcgttgcatataaatgctattgatttgtgtataatatttttgtatcctgaaaaactactgaagacatttatcagtaccggtagccctttggtggagtctttagggttttctaggtgtagaatcttattatc-----agcaaaaaaagatagtttgactc--tttttttttttttttttctatgtggatcccttttctttccctcccctgcctgagtcctctgactaggacttct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13587679 418 - 18804593 atgacactgattcttccaatacatgagcatggcatttttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcactgaagtctttcatctccttgtttgatgtacttctaggtatttta-tttttttgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgctatcgttgcatataaatgctattgatttgtgtataatatttttgtatcctgaaaaactactgaagacatttatcagtaccggtagccctttggtggagtctttagggttttctaggtgtagaatcttattatc-----agcaaaaaaagatagtttgactc---ttttttttttttttttctatgtggatcccttttctttccctcccctgcctgagtcctctgactaggacttct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13204423 421 + 18905526 atgacactgattcttccagtacatgagcatggcatttttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcactgaagtctttcatctccttgtttgatgtacttctaggtatttta-tttttttgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgctatcgttgcatataaatgctattgatttgtgtataatatttttgtatcctgaaaaactactgaagacatttatcagtaccggtagccctttggtggagtctttagggttttctaggtgtagaatcctattatc-----agcaaaaaaagatagtttgactctttttttttttttttttttctatgtggatcccttttctttccctcccctgcctgagtcctctgaccaggacttct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60034329 415 - 72318688 atgacactgattcttccaatacatgagcatggcatttttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcactgaagtctttcatctccttgtttgatgtacttctaggtatttta-tttttttgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgctatcgttgcatataaatgctattgatttgtgtataatatttttgtatcctgaaaaactactgaagacatttatcagtaccagtagccctttggtggaatctttagggttttctaggtgtagaatcctattatc-----agcaaaaaaagatagtttgactc------tttttttttttttctatgtggatcccttttctttccctcccctgcctgagtcctctgactaggacttct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 367946 411 - 1517660 atgacactgattcttccaatacatgagcatggca-ttttttttttcatttgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcactgaagtctttcatctccttgtttgatgtacttctaggtatttta-tttttttgtgggattgcatttttgatttggctc---------------------------------------------------------------tcagcttgaatgctatcgttgcatataaatgctattgatttgtgtataatatttttgtatcctgaaaaactactgaagacatttatcagtaccggtagccctttggtggagtctttagggttttctaggtgtagaatcctattatc-----agcaaaaaaagatagtttgactc---------tttttttcttctatgtggatcccttttctttccctcccctgcctgagtcctctgaccaggacttct i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105236859 469 + 117903854 atgacactgattcttccagtgcatgaacatggaa-ttttttttttcatttgttcatgttatctacaatttctttcatcagtgttttgtagttctcctcacagaaatccttcatctccttgtttgatgtactcctaggtatttta-ttattttgtggaattggatttttgatttggctctcagcttttttttcctttttt--aaaaattatactttaagttctggggtacatgtgcagatcatcagcttgaatgttactggtgtatagaaatgctattga-ttttgtataataattttgtatcctgaaaatttacttaagacatttatcagtatcagtagccttttggtggagtccttagggttttctaggtatagaattatattatc-----agcaaaaagagatagtttgact-----------ttttttttttttaatggatcccttttatttacttctcctgcctgattcctttggctagaatttct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19430049 472 - 31320352 atgacactgattcttccaatgcatgaacatgta---tttttttttcatttgttcatgtcatctataatttatttcatcagtgttttgtagttctcctcacagaagtctttcatctccttgtttgatgtactcctaggtattttattttttttgtggaattggatttttgatttggttcttagctttttttttccttttttaaaaaattatactttaagttctggagtacatgtgcagatcatcagcttgaatgttattggtgtatagaaatgctgttgatttttgtataataattttgtatcctgaaaatttacttaagatatttatcagtatcagtagccttttggtggagtctttagggttttctagatgtagaattatattatc-----agcaaaaagagatagtttgactc----------tttttttttttttatggatcccttttatttacttctcctgtctgattcctttggctaggacttcT i saiBol1.JH378121 C 0 I 1219 s cebCap1.NW_016107689v1 1625368 475 + 2203405 atgacactgattcttccaatgcatgaacatggaa--attttttttcatttgttcatgtcatctataatttctttcatcagtgttttgtagttctcctcacagaagtctttcatctccttgtgtgatgtactcctagata-ttta-tttttttgtggaattggatttttgatttggctctcagcttttttttttctttgtttttaaattatactttaagttctggggtacatgtgcagatcatcagcttgaatgttattggtgtatagaaatgctattgatttttgtataataattttgtgtcctgaaaatttacttaagacacttattagtatcagtagtcttttggtggagtctttagggttttctaggtgtagaattatattatc-----agcaaaaagagatagtttgactc------ttttttttttttttttaattgatcccttttatttacttctcctgcctgattcatttggctaggacttct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3577563 457 - 14941987 acgacaccgattcttccaatgcatgaacatggaa-aattttttttcatgtgttcatgtcatctacaatttctttcatcagtgttttgtagttctcctcacagaagtctttcatctccttgtttgatgtactcctaggtatttta-tttttctgtggaattggatttttgatttggctctcagctttttttttcctttttttttaaattatactgtaagttctggggtacatgtgcagatcatcagcttgaatgttattggtgtatagaaatgctattgatttttgtataataattttgtatcctgaaaatttacttaagacatttatcagtatcagtagccttttggtggagtctttagggttttctaggtgtagaattacattatc-----agcaaaaagagatagtttgacac----------tctttattt----atggatccctttca------------gcctggttcctttggctaggacttct i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e panTro5.chr18 65009932 7936 + 78221452 I a score=5335170.000000 s hg38.chr18_GL383571v1_alt 105766 892 + 198278 agtactacattgaacagtagtagtgagagtgggcatcct--tgtcttgttccagttcttaaggggaatgcttccattttttgcctcttcaatatgatgttggctgtaggattatcatagattgcgcttattgaggtatgttccttttatgtctaatttttttagggttatcattatgaagggttgttagattatattgcacgcttcttccatgtctattgagatgatcata------tggttttggtttttaattctgtttatgtggtgaatcatatacattaatttgcatatgttgaatctaacttgcatgccaggaatgaagcctactagatcataatgaattcattttgatgtgctgctaaaatcagcttggtagtatcttgttaaggatatttgtgtttatgttcatcagggatactgacctatttttgtttttgcttttgtttttgttttgcttctttgtgtctttgccaggttttgatatcagggtgatgcaggcttcatagaatgagttagggagaagatcctcttccttgattttttgtaatagttgaactggtatgaagttttctttgtacatctggtagaagtcagctatgactccatctggtccaggg-cttttttttttttttttttttttttg-gttggtagggttttttaaaattgctgattcaattgcagaactcaatattggcctggtcacattttaaatttgttcctgattcaatcttgggaggttgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcatagaggtgttcataatagtctcaaga-t--tttttgtatttctgttagatcaattgtaatgtcacctttgtttctgattatggttaaaaggatgttctcattttttct--tt s panPan2.chr18 64134604 871 + 77229886 agtactacattgaacagtagtagtgagagtgggcatcct--tgtcttgttccagttcttaaggggaatgcttccattttttgcctcttcaatatgatgttggctgtaggattatcatagattgctcttattgaggtatgttccttttatgtctaatttttttagggttatcattatgaagggatgttagattatattgcacgcttcttccatgtctattgagatgatcata------tggttttggtttttaattctgtttatgtggtgaatcatatacattaatttgcatatgttgaatctaacttgcatgccaggaatgaagcctactagttcataatgaattcattttgatgtgctgctaaaatcagcttggtagtatcttgttaaggatatttgtgtttatattcatcagggatactgacctatttttgtttttgcttttgtttttgttttgcttctttgtgtctttgccaggttttgatatcagggtgatgcaggcttcatagaatgagttagggagaagatcctcttccttgattttttgtaatagttgaactggtatgaagttttctttgtacatctggtagaagtcagctatgact--atctggtccaggg-c-tttttttttttttttttttttttg-gttggtagggttttat-aaattgctgattcaattgcagaactcaatattggcctggtcacattttaaatttgttcctggttcaatcttgggaggttgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcatagaggtgttcataatagtctcaaga-t--tttttgtatttctgttag-----------------ctttgtttctgattatggttaaaaggatgttctcattttttct--tt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5354419 884 + 17472758 agtactacattgaacagcagtagtgagagtgggcatcct--tgtcttgttccagttcttaaggggaatgcttccattttttgcctcttcaatatgatgttggctgtaggattatcacagattgctcttattgaggtatgttccttttatgtctaatttttttagggttatcattatgaagggatgttagattatattgcaagcttcttccatgtctattgagatgatcata------tggttttggtttttaattctgtttatgtggtgaatcatatacattaatttgcttatgttgaatctaacttgcatgccaggaatgaagcctactagatcataatgaattcattttgatgtgctgctaaaatcagcttggtagtatcttgttaaggatatttgtgtttatgttcatcagggatactgacctatttttgtttttgcttttgtttttgttttgcttctttgtgtttttgccaggttttgatatcagggtgatgcaggcttcatagaatgagttagggagaagatcctcttctttgatttttttgaatagttgaactggtatgaagttttctttgtacatctggtagaagtcagctgtgactccatctggtccagag-c-------tttttttttttttttttg-gttggtagggttttttaaaattgctgattcaattgcagaactcaatattggcctggtcacattttaaatttgttcctgattcaatcttgggaggttgtgtgtctccaggaatttatccatttcctttggactttctagtttgtgtgcatagaggtgttcataatagtctcaaga----tttctgtatttctgttagatcaattgtaatgtcacctctgtttctgattatggttaaaaggatgttctcattttttct--tt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139394517 876 - 152096393 agtactacattgaacagcagtagtgagagtgggcatcct--tgtctttttccagttcttaaggggaatgcttccattttttgcctcttcaatatgatgttggctgtgggattatcatagattgctcttattgaggtatgttccttttatgcctaatttttttagggttatcattatgaagggatgttagattatattgtgcgcttcttccatgtctattgacatgatcata------tggttttgatttttaattctgtttatgtggtgaatcatatacattaatttgcatatgttgaatctaacttgcatgccaggaatgaagcctactagatcataatgaattaattctgatgtgctgctaaattcagcttggtagtattttgttaaggatatttgtgtttatgttcaccagggatactgacctat------------ttttgtttttgttttgcttctttatgtctttgccaggttttgatatcagagtgatgcaggcttcatagaatgagttagggagaagaccctcttctttgattttttggaatagttgaattggtatgaagttttctttgtacatctggtagaagtcagctatgaatccatctggtccaggg-c----ttttttttttttttttttttg-gttaatagggttttttaaaattgctgattcaattgcagaactcaatattggcctgttcacattttaaatttgttcctgattcaatcttgggaggttgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtacatagaggtgttcataatagtctcaaga-t--tttttgtatttctgttagatcaattgtaatgtcacctttgtttctgattatggttaaaaggatgttctcattttttct--tt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57343948 871 + 70235451 agtactacattgaacagcactagtgagagtgggcatccttgtgtcttgctccagttcttaaggggaatgcttccagtttttgcctcttcaatatgatgttggctgtgggattagcatagattgctcttattgaggtatgttccttttatgcctaactttttgagggttatcattatgaagggacgttagattatattgcatg-----tctatgtctactgagatgatcaca------aggttttggtttttaattctgtttatgtggtgaatcacatatattaatttgcatatgttgaatctaacttgcatgtaaggaatgaagcctactagatcataatgaattaattttgatgtgctgctaaattcagcttggtagtattttgttgaggatatttgtgtttgtgttcatcagggatactgacgtgtttttg-ttttgtttttgtttttgttttgcttctttgtgtctttgccaggttttggtaccagggtgatgcaggcttcatagaatgagttagggagaagatcctcttctttgattttttgggatagttgaactgatatgaagttttcttcgtacatctggtagaattcagctatgaatccatccagtccaggg-t-----------------tttttttg-gttggtagggttttttaaaattgctgattcaattgtagaactcaatattggcctgttcacattttaagtttgttcctgattcaatcttgggaggatgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcacagaggtgttcataatagtttcaaga-t--tttttgtatttctattagatcaattgtaatgtcacctttgtttctgattatgtttaactggatgttttcattttttct--tt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63035343 871 - 75711847 agtactacattgaacagcactagtgagagtgggcatccttgtgtcttgctccagttcttaaggggaatgcttccagtttttgcctcttcaatatgatgttggctgtgggattagcatagattgctcttattgaggtatgttccttttatgcctaactttttgagggttatcattatgaagggacgttagattatattgcatg-----tctatgtctactgagatgatcaca------aggttttggtttttaattctgtttatgtggtgaatcacatatattaatttgcatatgttgaatctaacttgcatgtaaggaatgaagcctactagatcataatgaattaattttgatgtgctgctaaattcagcttggtagtattttgttgaggatatttgtgtttgtgttcatcagggatactgacctgtttttg-ttttgtttttgtttttgttttgcttctttgtgtctttgccaggttttggtaccagggtgatgcagggttcatagaatgagttagggagaagatcctcttctttgattttttgggatagttgaactggtatgaagttttcttcgtacatctggtagaattcagctatgaatccatccagtccaggg-t-----------------tttttttg-gttggtagggttttttaaaattgctgattcaattgtagaactcaatattggcctgttcacattttaagtttgttcctgattcaatcttgggaggatgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcacagaggtgttcataatagtttcaaga-t--tttttgtatttctattagatcaattgtaatgtcacctttgtttctgattatgtttaactggatgttttcattttttct--tt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13588097 871 - 18804593 agtactacattgaacagcactagtgagagtgggcatccttgtgtcttgctccagttcttaaggggaatgcttccagtttttgcctcttcaatatgatgttggctgtgggattagcatagattgctcttattgaggtatgttccttttatgcctaactttttgagggttatcattatgaagggacgttagattatattgcatg-----tctatgtctactgagatgatcaca------aggttttggtttttaattctgtttatgtggtgaatcacatatattaatttgcatatgttgaatctaacttgcatgtaaggaatgaagcctactagatcataatgaattaattttgatgtgctgctaaattcagcttggtagtattttgttgaggatatttgtgtttgtgttcatcagggatactgacgtgtttttg-ttttgtttttgtttttgttttgcttctttgtgtctttgccaggttttggtaccagggtgatgcagggttcatagaatgagttagggagaagatcctcttctttgattttttgggatagttgaactggtatgaagctttcttcgtacatctggtagaattcagctatgaatccatccagtccaggg-t-----------------tttttttg-gttggtagggttttttaaaattgctgattcaattgtagaactcaatattggcctgttcacattttaagtttgttcctgattcaatcttgggaggatgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcacagaggtgttcataataatttcaaga-t--tttttgtatttctattagatcaattgtaatgtcacctttgtttctgattatgtttaactggatgttttcattttttct--tt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13204844 871 + 18905526 agtactacattgaacagcactagtgagagtgggcatccttgtgtcttgttccagttcttaaggggaatgcttccagtttttgcctcttcaatatgatgttggctgtgggattagcatagattgctcttattgaggtatgttccttttatgcctaactttttgagggttatcattatgaagggacgttagattatattgcatg-----tctatgtctactgagatgatcaca------aggttttggtttttaattctgtttatgtggtgaatcacatatattaatttgcatatgttgaatctaacttgcatgtaaggaatgaagcctactagatcataatgaattaattttgatgtgctgctaaattcagcttggtagtattttgttgaggatatttgtgtttgtgttcatcagggatactgacctgtttttg-ttttgtttttgtttttgttttgcttctttgtgtctttgccaggttttggtaccagggtgatgcagacttcatagaatgagttagggagaggatcctcttctttgatattttgggatagttgaattggtatgaagttttcttcatacatctggtagaattcagctatgaatccatccagtccaggg-t-----------------tttttttg-gttggtagggttttttaaaattgctgattcaattgtagaactcaatattggcctgttcacattttaagtttgttcctgattcaatcttgggaggatgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcatagaggtgttcataatagtttcaaga-t--actttgtatttctattgcatcaattgtaatgtcacctttgtttctgattatgtttaactggatgttttcattttttct--tt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60034744 877 - 72318688 agtactacattgaacagcactagtgagagtgggcatccttgtgtcttgctccagttcttaaggggaatgcttccagtttttacctcttcaatatgatgttggctgtgggattagcatagattgctcttattgaggtacgttccttttatgcctaactttttgagggttatcattatgaagggatgttagattatattgcatgcttcttccatgtctattgagatgatcaca------aggttttggtttttaattctgtttatgtggtgaatcacatatattaatttgcatatgttgaatctaacttgcatgtaaggaatgaagcctactagattataatgaattaattttgatgtgctgctaaattcaccttggtagtattttgttgaggatatttgtgtttatgttcatcagggatactgacctgtttttg-ttttgtttttgtttttgttttgcttctttgtgtctttgccaggttttggtaccagggtgatgcaggcttcatagaatgagttagggagaagatcctcttctttcagtttttggaatagttgaattggtatgaagttttcttcgtacatctggtagaattcagctatgaatccatccagtccaggg-c-----------------tttttttg-gttggtggggtttttaaaaattgctgattcaattgtagaactcaatattggcctgttcacattttaagtttgttcctgattcaatcttgggaggatgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcatagaggtgttcataatagtctcaagatt--tttttgtatttctgttagatcaattgtaatgtcacctttgtttctgattatggttaactggatgttttcattttttct--tt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 368357 872 - 1517660 agtactacattgaacagcactagtgagagtgggcatccttgtgtcttgctccagttcttaaggggaatgcttccagtttttgcctcttcaatatgatgttggctgtgggattagcatagattgctcttattgaggtatgttccttttatgcctaactttttgagggctatcattatgaagggacgttagattatattgcatg-----tctatgtctactgagatgatcaca------aggttttggtttttaattctgtttatgtggtgaatcacatatattaatttgcatatgttgaatctaacttgcatgtaaggaatgaagcctactagatcataaggaattaattttgatgtgctgctaaattcagcttggtagtattttgttgaggatatttgtgtttgtgttcatcagggatactgacctgtttttg-ttttgtttttgtttttgttttgcttctttgtgtctttgccgggttttggttccagggtgatgcaggcttcatagaatgagttagggagaagatcctcttctttgattttttgggatagttgaactggtatgaagttttcttcgtacatctggtagaattcagctatgaatccatccagtccagggtt-----------------tttttttg-gttggtagggttttttaaaattgctgattcaattgtagaactcaatattggcctgttcacattttaagtttgttcctgattcaatcttgggaggatgtgtgtctccaggaatttatccatttcctctagactttctagtttgtgtgcatagaggtgttcataatagtttcaaga-c--tttttgtatttctattagatcaattgcaatgtcacctttgtttctgattatgtttaactggatgttttgattttttct--tt i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105237328 853 + 117903854 agtactatgttgagcagaagtagtgagagtaggcatcct--tgtcttgcttgagttcttaagggaaatgcttccagttttcgcctcttcaatatgatgttggctgtgggattaacatagattgttcttattgaggtacattccttttatgcctaattttttgatggttatcattatgaagagatagtagattatattgcaggctttttccatgtctattgagatgatcacatggttttggtttttgtttttaattctgtttatgtggtgagtcacatatattaatttgcatatactgaatctaacttgcatgccaggaattaagcctattagataatagtgaattaattttgatgtgctgctagattcaacttgctagtattctggtgaggatatttgtgtttatgttcagcagggatactgacctgtatttt----------------------------ttctgtctttgccaggttttgatatcacagtgatgcagacttcatagaatgag-taaggaaaagaccctctttcttgattttttggaatagtagaattagtatcaagtcttctttgcatatctggtagaattcagctgtgaatccatctggtctaggg-c----------------tttttttttagttggtagggtttttt-aaattgctgattcaattgaggaactcaatattggcctgttcacattttaaatttcttcctgattcaatattgggaggttgtgtgtctccaggaatttatccatttcctcttgactttctagtttgtgtgcatagaggtgttcataatagtctcaaga-ttatttttgtatttctgttagatcaattgtaatgtcacctttgtttctgattatggttaactggatcttctcttttttttt---- i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1625843 847 + 2203405 agtactatgctgaacagaagcagtgagagtaggcatcct--tgtcttgtttgagttctgaaggggaatgcttccagtttttgcctcttcaatatgatgttggctgtgggattatcatagattgctcttattgaggtacattccttttatgcctaattttttgagggttatcattatgaagggatagtagattatattgcaggctttttccatgtctattgagatgatcata------tgatttttgtttttaattctgtttatgtggtgcgtcacatatattaatttgcatatattgaatctaacttgcatgccaggaattaagcctactagatcatagtgaattaattttgatgtgctgctagattcagcttgctagtattctggtgaggatatttctgtttatgttcagcagggatactgaactgtatttt----------------------------ttctgtctttgccaggttttgatattatggtgatgcagacttcatagaatgag-taaggaaaagaccctcttccttaattttttgtaatagtggaattagtatcaagtcttctttgtatatctggtagaattcagctgtgaatccatctggtctaggg-c----------------cttttttct-gttggtagggttttttaaaattgctgattcaattgcagaactcaatattgtcctgttcacatttt-aatttcttcctgattcaatattgggaggttgtgtgtctccagaaatttatccatttcctcttgactttctagtttgtgtgcatagaggtgttcataatagtctcaaga-tt-tttttgtatttctgttagatcaattgtactgtcacctttgtttctgattatggttaactggatcttctcttttttttttt-- i cebCap1.NW_016107689v1 C 0 I 110 s aotNan1.NW_018502140v1 3578020 846 - 14941987 agtactatgttgaacagaagtagtgagaagaggcatcct--tgtcttgtttgagctcttaaggggaatgcttccagtttttgcctcttcaatatgatgttagctgtgggattatcatacattgctcttattgaggtacattccttttatgcctaattttttgagggttatcattatgaagggatagtagattatattgcaggctttttccatggctattgagatgatcata------tggtttttgtttttaattctgcttatgtggtgagtcacatatattaatttgcatatattgaatctaacttgcatgccaggaattaagcctactagatcatagtgaattaattctgatgtgcttctagattcagcttgctagtattctggtgaggatatttgtgtttatgttcagcaggggtacttacctgtatttt----------------------------ttctgtctttgccaggttttgatatcacggtgatgcagacttcatagaatgag-taaggtaaagaccctcttccttgattttttggaatagtggaattagtatcaagtcttctttgtatatccagtagaatttagctgtgaatccatttggtctaggg-c----------------tgttttttg-gttggtagggttttttaaaattgctgattcaattgcggaactcaatattggtctgttcacattttaaatttcttcatgattccatattgggaggttgtgtgtctccaggaatttatccatttcctcttgactttctagtttgtatgcatagaggtgttcataatagtctcaaga-tt-tttttgtatttctgttagatcaattgtaatgtcacctttgtttctgattatggctaactggatcttcttttttttttt---- i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e panTro5.chr18 65009932 7936 + 78221452 I a score=527778.000000 s hg38.chr18_GL383571v1_alt 106658 99 + 198278 gttaatctagctagtggtctatcaatcttctttatcctttcaaataaccaacttttggttttatcaattctttgtgtaaa-tttttgagtctcaattttg s panPan2.chr18 64135475 99 + 77229886 gttaatctagctagtcgtctatcaatcttctttatcctttcaaataaccaacttttggttttatcgattctttgtgtaaa-tttttgagtctcaattttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5355303 99 + 17472758 gttaatctagctagtggtctatcaatcttctttatcctttcaaataaccaacttttggttttatcgattctttgtgtaaa-tttttgagtctcaattttg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139395393 99 - 152096393 gttaatctagctagtggtctatcaatcttctttatcctttcaaataaccaacttttggttttatggattttttgtgtaaa-tttttgagtctcaattttg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57344819 96 + 70235451 gttaatctagctagtggtctatcaatcttc---atcctttcgaataaccaacttttggttttattgattctttgtataaa-tttttgagtctcaattttg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63036214 96 - 75711847 gttaatctagctagtggtctatcaatcttc---atcctttcgaataaccaacttttggttttattgattctttgtataaa-tttttgagtctcaattttg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13588968 96 - 18804593 gttaatctagctagtggtctatcaatcttc---atcctttcgaataaccaacttttggttttattgattctttgtataaa-tttttgagtctcaattttg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13205715 96 + 18905526 gttaatctagctagtggtctatcaatcttc---atcctttcgaataaccaacttttggttttattgactctttgtataaa-tttttgagtctcaattttg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60035621 96 - 72318688 gttaatctagctagtggtctatcaatcttc---atcctttcgaataaccaacttttggttttattgattctttgtataaa-tttttgagtctccattttg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 369229 96 - 1517660 gttaatctagctagtggtctatcaatcttc---atcctttcgaataaccaacttttggttttattgattctttgtataaa-tttttgagtctcaattttg i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105238181 99 + 117903854 cttaatctagctagtgctctatcaattttctttattctttcaaataatcaa-ttttggttttattgattctttgtataaattttttgagtctcaatttTG i calJac3.chr13 C 0 I 1 s aotNan1.NW_018502140v1 3578866 99 - 14941987 cttaatctagctattggtctatcaattttctttattcttttgaataatcaacttttggttttattgattctttgtataaa-tttttgagtctcaatttTG i aotNan1.NW_018502140v1 C 0 I 7 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e panTro5.chr18 65009932 7936 + 78221452 I a score=3987503.000000 s hg38.chr18_GL383571v1_alt 106757 1043 + 198278 ttcagttctgctcggattttagtaatttattttcttctgctaactttggggctggtatattttgatttttctagttcctctagctgtgatgttacattgttaatctgcgatctttctaa-tttttgaggtgggcatttagcactataaattttcctcttaacactgcttttttctgcatcccagagattttggtatgttgtgtctctattttcatttatttccaagaatttattttttgttttctttatcaatttcattttttaaacaaaagtcattcaggaacaagttgtttcatttctatgtattgtgtggttttgggagatcttcttagtattgacttctatttttgttccactatggtctgagtatggttggtaagattttgatttatttgattattcaacattatgaatggctgagcatgtgactttatgttcaagcatgtgactgatcttgaagtatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtccagtaggtctacttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcctaggtctagaagcagttgttttataaggttgagtgctccaatgttgggtgtatatatatttaggatagttaagtcttcttgttgaatagaaccctttatcattctgtaatgcctttcttctacc-ttttttactgttattggtttaaagtctattttatctgttgcaagaatagtgacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatgctttgaacctatgggtatcattacatgtgagatgggtctcttgaagacagcagatggatgaatctttttcttttttaatccagcttgcatctttgtgccctttaaattggatgtttagactgtttacatgcaaagttaatattgatat s panPan2.chr18 64135574 1041 + 77229886 ttcagttctgcttg---tttagtaatttattttcttctgctaactttggggctggtatattttgatttttctagttcctctagctgtgatgttacattgttaatctgcgatctttctaa-tttttgaggtgggcatttagcactataaattttcctcttaacactgcttttttctgcatcccagagatttcggtatgttgtgtctctattttcatttatttccaagaatttattttttgttttctttatcaatttcattttttaaacaaaagtcattcaggaacaagttgtttcatttctatgtattgtgtggttttgggagatcttcttagtattgacttctatttttgttccactatggtctgagtatggttggtaagattttgatttatttgattattcaacattatgaatggctgagcatgtgactttatgttcaagcatgtgactgatcttgaagtatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtccagtaggtctacttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcctaggtctagaagcagttgttttatgaggttgagtgctccaatgttgggtgtatatatatttaggatagttaagtcttcttgttgaatagaaccctttatcattctgtaatgcctttctttgacctttttttactgttattggtttaaagtctattttatctgttgcaagaatagtgacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtatcattacatgtgagatgggtctcttgaagacagcagatggatgaatctttttcttttttaatccagcttgcatctttgtgccctttaaattggatgtttagactgtttacatgcaaagttaatattgatat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5355402 1039 + 17472758 ttcagttctgctcggattttagtaatttattttcttctgttaactttggggctggtatattttgatttttctagttcctctagctgtgatgttacattgttaatctgcgatct---aac-tttttgagttgggcatttagcactataaattttcctcttaacactgcttttttctgcatcccagagatttcggtatgttgtgtctctattttcatttatttccaagaatttattttttgttttctctatcaatttcattttttaaac-aaagtcattcaggaacaagttgtttcatttctatgtattgtgtggttttgggagatcttcttagtattgacttctatttttgttccactatggtctgagtatggttggtaagattttgatttatttgattattcaacattatgaatggcttagcatgtgactttatgttcaagcatgtgactgatcttgaagtatgttctgtgtgcagatgaaaataatgtatattttgtggctgatgggtggagtgttctgtagatgtccagtaggtctacttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcctaggtctagaagcagttgttttatgaggttgagtgctccaatgctgggtgtatatatatttaggatagttaagtcttcttgttgaatagaaccctttatcagtctgtaatgcctttctttgacc-ttttttactgttattggtttaaagtctactttatctgatgcaagaatagtgacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatattttgaacctatgggtgtcattacatgtgagatgggtctcttgaagacagcagatggatgaatctttttctttttaaatccagcttgcatctttgtgccctttaaattggatgtttagactgtttacatgcaaagttaatactgatat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139395492 1037 - 152096393 ttcagatctgctcggatttgagtaatttattttattctgctaactttggggctggtatattttgatttttctagttcctctagctgtgatgttacattgttaatctgagatctttctaactttttgaggtgggcatttagcactgtaaattttcctcttaacactac-tttttctgcatcccagagattttggtatgttgtgtctctattttcatttatttccaata----tttttttgttttctctatcaatttcattttttaaacaaaagtcattcaggaacaagttgtttcatttctatgtattgtgtggttttgggagaccttcttagtattgacttctatttttgttccactatcgtctgagtatggttggtaagattttgatttatttgattattcaacattatgaatggccgagcatgtgactttatgttc-agcatgtgactgatcttaaagtatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaagtctacttagtcaagcattgaatttacgtccagtatttctttgttagttttctgtctcaataacctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcataggtctagaagcagttattttatgaggttgagtgctccaatgttggatgtatatatatttaggatagttaagtcttcttgttgaatagaaccctttatcattctgtaatacctttctttgac--ttttttactgttattggtttaaagtctatttcatctgatgcaaaaatagtgacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagatgggcctcttgaagacagcagatggatgaatctttttcttttttaatccagcttgcatctttgtgccctttaaatagtacgtttagactgtttacatgcaaagttaatattgatat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57344915 1028 + 70235451 ttcagttctgctcagattttagtaatttattttcttctgctaactttggggttgatatgttttgatttttctagttcctctagctgtgatgttacattgttaatct--gatctttctaactttttgaggttggcatttagccctgtaaattttcctcttaatactgtttttttctgcatcccagagattttggtatgttgtgtctctattttcattcatttccaaga----attttttgttttctctatcaatttcattttttaaacaaaagccattcaggaacaagttgtttcatttctatgtattgtgtggttttgagagatcttcttagtattgatatctatttttgttccattgtggtctgagtatggttggtaagattttgatttatttgatttttcaatattatgaatagctaagcatgtgactttatgtccatgcatgtgtctcattttgaagaatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaggtctagttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcataggtctagaagcagttgttttttgaggttgagtgctccaatgttgggtgcatatatatttaggatagttaagtcttcttgttgaatagaactctttatcattctgtaatgcctttctttgaca-ttttttactgttactggtttaaagtctattttatctgatgcaagaatagggacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagataggtctcttgaagacagcagatggatgaaactttttgtttttaaatccagct----------tgccctttaaataggatgtttagaccgtttacatgcaaagctaatattgatat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63036310 1028 - 75711847 ttcagttctgctcggattttagtaatttattttcttctgctaactttggggttgatatgttttgatttttctagttcctctagctgtgatgttacattgttaatct--gatctttctaactttttgaggttggcatttagccctgtaaattttcctcttaatactgtttttttctgcatcccagagattttggtatgttgtgtctctattttcattcatttccaaga----attttttgttttctctatcaatttcattttttaaacaaaagccattcaggaacaagttgtttcatttctatgtattgtgtggttttgagagatcttcttagtattgatatctatttttgttccattgtggtctgagtatggttggtaagattttgatttatttgatttttcaatattatgaatagctaagcatgtgactttatgtccatgcatgtgtctcattttgaagaatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaggtctagttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcataggtctagaagcagttgttttttgaggttgagtgctccaatgttgggtgcatatatatttaggatagttaagtcttcttgttgaatagaactctttatcattctgtaatgcctttctttgaca-ttttttactgttactggtttaaagtctattttatctgatgcaagaatagggacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagataggtctcttgaagacagcagatggatgaaactttttgtttttaaatccagct----------tgccctttaaataggatgtttagaccgtttacatgcaaagctaatattgatat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13589064 1028 - 18804593 ttcagttctgctcggattttagtaatttattttcttctgctaactttggggttgatatgttttgatttttctagttcctctagctgtgatgttacattgttaatct--gatctttctaactttttgaggttggcatttagccctgtaaattttcctcttaatactgtttttttctgcatcccagagattttggtatgttgtgtctctattttcattcatttccaaga----attttttgttttctctatcaatttcattttttaaacaaaagccattcaggaacaagttgtttcatttctatgtattgtgtggttttgagagatcttcttagtattgatatctatttttgttccattgtggtctgagtatggttggtaagattttgatttatttgatttttcaatattatgaatagctaagcatgtgactttatgtccatgcatgtgtctcattttgaagaatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaggtctagttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcataggtctagaagcagttgttttttgaggttgagtgctccaatgttgggtgcatatatatttaggatagttaagtcttcttgttgaatagaactctttatcattctgtaatgcctttctttgaca-ttttttactgttactggtttaaagtctattttatctgatgcaagaatagggacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagataggtctcttgaagacagcagatggatgaaactttttgtttttaaatccagct----------tgccctttaaataggatgtttagaccatttacatgcaaagctaatattgatat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13205811 1027 + 18905526 ttcagttctgctcggattttagtaatttattttcttctgctaactttggggttgatatgttttgatttttctagttcctctagctgtgatgttacattgttaatct--gatctttctaactttttgaggttggcatttagccctgtaaattttcctcttaacactg-ttttttctgcatcccagagattttggtatgttgtgtctctattttcattcatttccaaga----attttttgttttctctatcaatttcattttttaaacaaaagccattcaggaacaagttgtttcatttctatgtattgtgtggttttgagagatcttcttagtattgatatctatttttgttccattgtggtctgagtatggttggtaagattttgatttatttgatttttcaatattatgaatagctaagcatgtgactttatgtccatgcatgtgtctcattttgaagaatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaggtcgagttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctttcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcataggtctagaagcagttgttttttgaggttgagtgctccaatgttgggtgcatatatatgtaggatagttaagtcttcttgttgaatagaactctttatcattctgtaatgcctttctttgaca-ttttttactgttactggtttaaagtctattttatctgatgcaagaatagggacccctgctctttttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagataggtctcttgaagacagcagatggatgaaactttttgtttttaaatccagct----------tgccctttaaataggatgtttagaccatttacatgcaaagctaatattgatat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60035717 1025 - 72318688 ttcagttctgctcggattttagtaatttattttcttctgctaactttggggttgatatgttttgatttttctagttcctctagctgtgatgttactttgttaatct--gatctttctaactttttgaggctggcatttagccctataaattttcctcttaacactg-ttttctctgcatcccagagattttggtatgttgtgtctctattttcattcatttccaaga----attttttgttttctctatcaatttcattttttaaacaaaagccattcaggaacaagttgtttcatttctatgtattgtgtggttttgagagatcttcttagtattgatttctatttttgttccactatggtctgagtatggtcagtaagattttgatttatttgatttttcaatattatgaatggctaagtgtgtgactttatatccatgcatgtgtctcattttgaagaatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaggtctagttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaagaccccactattagtatgtggctctttaagtcttctcataggtctagaagcagttgttttatgaggttgagtgctccaatgttgggtgcatatatatttatgatagttaagtcttcttgttgaatagaactctttatcattccgtaatgcctttctttgaca-ttttttac--ttactggtttaaagtctattttatctgatgcaagaataaggacccctgctcttcttttgttttctatttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagatgggtctcttgaagacagcagatagatgaatatttttgtttttaaatccagct----------tgccctttaaataggatgtttagaccgtttacatgcaaagctaatattgatat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 369325 1025 - 1517660 ttcagttctgctcggattttagtaatttattttcttctgctaactttggggttgatatgttttgatttttctagttcctctagctgtgatgttacattgttaatct--gatctttctaactttttgaggttggcatttagccctgtaaattttcctcttaacactg-ttttttctgcatcccagagattttggtatgttgtgtctctattttcattcatttccaaga----attttttgttttctctatcaatttcattttttaaacaaaagccattcaggaacaagttgtttcatttctatgtattgtgtggttttgagagatcttcttagtattgatatctatttttgttccattgtggaacaa--atggttggtaagattttgatttatttgatttttcaatattatgaatagctaagcatgtgactttatgcccatgcatgtgtctcattttgaagaatgttctgtgtgcagatgaaaataatgtatattttgtggttgatgggtggagtgttctgtagatgtctagtaggtctagttagtcaagcattgaatttaagtccagaatttctttgttagttttctgtctcaataatctgtctaatgctgtcagtgagctgttgaacaccccactattagtatgtggctctttaagtcttctcataggtctagaagtagttgttttttgaggttgagtgctccaatgttgggtgcatatatatttaggatagttaagtcttcttgttgaatagaactcttcatcattctgtaatgcctttctttgaca-ttttttactgttactggtttaaagtctattttatctgatgcaagaatagggacccctgctctttttttgttttctgtttacatgatggatctttctccaaccctatactttgaacctatgggtgtcattacatgtgagataggtctcttgaagacagcagatggatgaaactttttgtttttaaatccagct----------tgccctttaaataggatgtttagaccgtttacatgcaaagctaatattgatat i manLeu1.NW_012106698v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e panTro5.chr18 65009932 7936 + 78221452 I a score=4925545.000000 s hg38.chr18_GL383571v1_alt 107800 1081 + 198278 gtgaggttttgatccaatcttggagctgttaatggttgctttgaagtttctatgttattgttgctt--------------------tataggatctgtgggttctgtacttaaatgtgtttttgtggtagctggtattgttcttttgtttacatatttagaattcccttaacaatctcttgtaatactaatctagtggtaacaagttcccttagcagttgcttgtctgaaaaatactttatttttcctt---ttatgaagcttaatttggtgggacatgaaattcttggttggttggaatttcttgtctttgagaatgctggaagtatgtccccaatcttccctggctggtaaggtttctgctgagaaatctgccgttagcctgacggggttccttttgtacatgatttgacatttttctctaggtgactttaagattttttctttagcattgactttgggcagtctggtgactatatgccttggggatattcattttgtatattatgttgcaggtgttctctggttttcttgtatctggatgtctacctctctagcaagattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatcccttttaaaattatttttgtccaagttagtttgaaaaatcagtcttcaggccaggtgcagtggctcatgcctgtaatcccagcactttgggaggccggggcaggcggatcatgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctactgaaaatacaaaaaattagccaggtgtcgtggtgggcacctgtagtcccagctacttgggaggccgaggcaggagaacggcgtgaacccaggaggcagagcttgcagtgagccgagatcatgccactgcactccagcctgggcaacagagcgagactccgtct-c----------aaaaaaaaaaaaaaatcagtattcaaactctaaatttcttttt-cttcttc-ttcttttttttttttt s panTro5.chr18 65017868 1076 + 78221452 gtgaggttttgatccaatcttggagctgttaatggttgctttgaagtttctatgttattgttgctt--------------------tataggatctgtgggttctgtacttaaatgtgtttttgtggtagctggtattgttcttttgtttacatatttagaattcccttaacaatctcttgtaatgctaatctagtggtaacaagttcccttagcagttgcttgtctgaaaaatactttatttttccttagtttatgaagcttaatttggtgggacatgaaattcttggttggttggaatttcttgtctttgagaatgctggaagtatgtccccaatcttccctggctggtaaggtttctgctgagaaatctgccgttagcctgatggggttccttttgtacatgatttgacatttttctctaggtgactttaagattttttctttagcattgactttgggcagtctggtgactatatgccttggggatattcattttgtatattatgttgcaggcgttctctggttttcttgtatctggatgtctacctctctagcaagattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatcccttttaaaattatttttgtccgacttagtttgaaaaatcagtcttaaggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctggggcaggcggatcatgaggtcaggagattgagaccatcctggctaacacagtgaaaccctgtctctactgaaaatacaaaaaattagccaggtgtcgtggtgggcacctgtagtctcagctacttgggaggccgaggcaggagaacggcgtgaacccaggaggcagagcttgcagtgagccgagatcgtgccactgcactccagcctgggcaacagagtgagactccatct-c----------aaaaaaaaaaaaaaatcagt-ttcaaactctaaatttcttttt-cttcttc-tt-------ttttttt i panTro5.chr18 I 7936 C 0 s panPan2.chr18 64136615 1081 + 77229886 gtgaggttttgatccaatcttggagctgttaatggttgctttgaagtttctatgttattgttgctt--------------------tataggatctgtgggttctgtacttaaatgtgtttttgtggtagctggtattgttcttttgtttacatatttagaattcccttaacaatctcttgtaatgctaatctagtggtaacaagttcccttagcagttgcttgtctgaaaaatactttatttttccttagtttatgaagcttaatttggtgggacatgaaattcttggttggttggaatttcttgtctttgagaatgctggaagtatgtccccaatcttccctggctggtaaggtttctgctgagaaatctgccgttagcctgatggggttccttttgtacatgatttgacatttttctctaggtgactttaagattttttctttagcattgactttgggcagtctggtgactatatgccttggggatattcattttgtatattatgttgcaggtgttctctggttttcttgtatctggatgtctacctctctagcaagattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatcccttttaaaattatttttgtccgacttagtttgaaaaatcagtcttaaggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctggggcaggcggatcatgaggtcaggagattgagaccatcctggctaacacagtgaaaccctgtctctactg-aaatacaaaaaattagccaggtgttgtgttgggcacctgtagtcccagctacttgggaggccgaggcaggagaacggcgtgaacccaggaggcagagcttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagagtgagactccatct-c-----------aaaaaaaaaaaaaatcagtattcaaactctaaatttctttttacttcttT-CT--TTTTTTTTTTTT i panPan2.chr18 C 0 I 305 s gorGor5.CYUI01014964v1 5356441 1077 + 17472758 gtgaggttttgatccaatcttggagctgttaatggttgctttgaagtttctattttattgttgctt--------------------tataggatctgtgggttctgtacttaaatgtgtttttgtggtagctggtattgttcttttgtttacatatttagaattcccttaacaatctcttgtaatgctaatctagtggtaacaagttcccttagcagttgcttgtctgaaaaatactttatttttccttagtttatgaagcttaatttggtgggacatgaaattcttggttggttggaatttcttgtctttgagaatgctggaagtatgtccccagtcttccctggctggtaaggtttctgctgataaatctgccgttagcctgatggggttccttttgtacatgatttgacatttttctctaggtgactttaagattttttctttagcattgactttgggcagtctggtgactatatgccttggggatattcattttgtatattatgttgcaggtgttctctggttttcttgtatctggatgtctacctctctagcaagattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttaacaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatcccttttaaaattatttttgtccgagttagtttgaaaaatcagtattcaggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggcc-gggcaggc-gatcatgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctactgaaaatacaaaaaattagccaggtgtcgtggtgggcacctgtagtcccagctacttgggaggccgaggcaggagaacggcgtgaacccaggaggtagagcttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcgagactccgtct-c-------aaaaaaaaaaaaaaaaaatcagtattcaaactctaaatttcttttt-cttcttc-tt-------tttttt- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139396529 1081 - 152096393 gtgaggttttgatccaatcttggagctgttaatggttgctttgaagtttctattttatcattgctt--------------------tataggatctgtgggttatgtacttacatgtgtttttgtggtagctggtattgttcttttgtttacatatttagaattcccttaacaatctcttgtaatgctaatctagtggtaacaagttcccttagcggttgcttgtctagaaaatactttatttttccttagtttatgaagcttagtttggtgggacatgaaattcttggttggttggaatttc------tttagaatgctggaagtatgtcctcaatctttgctggctggtaaggtttctgctgagatatctgctattagcctgatggggttctttttgtacatgatttgacatttttctccaggtgactttaagattttttcttcagcattgactttgggcagtctggtgac--tatgccttggtgatattcattttgtatattctgttgcaggtgttctctggttttcttgtatctggatgtctacctctctagcaagattagaaaaattttcttgaattattccatcgaatatgttttccaggttgtttaccttttctccttttctctcagggatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatcccttttaaaattatttttgtccgagttagtttgaaaaatcagtcttcaggccaggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcggatcatgaggtcaggagatcaagaccatcctggctaacatggtgaaaccctgtctctactgaaaatac----aattagccgggtgtcatggcggtcgcctgtagtcccagctactagggaggccgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgtgccactgcatgccagcctgggcaacagagtgagactccatct-caaaaa-aaaaaaaaaaaaaaaaaaatcagtcttcaaactctaaatttcttttt-cttcttc-ttcttctttttttttt i nomLeu3.chr4 C 0 I 4 s rheMac8.chr18 57345943 1078 + 70235451 gtgaggttttgatccagtcttggagctttttattgttgctttgaagtttctattttatcgttgctt--------------------tatgggatctgtgggttatgtacttaaatgtgtttctgtggtagctggtattgttcttgtgtttacatatttagaatttccttagcaatctcttgtaatgctaatctagtggtaacaagttcccttagtggttgcttgtctggaaaacattttatttttccttagtttat-aagcttactttggtgggacatgaaattcttggttggttggaatttcttgtctttgaaaatgctgaaagtatgtccccaatc----ctggctggtaagctttctgctaagaaatctgccattagcctgatggggttccttttgtacatgatttgacaattttctctaggtgcctttaagattttttctttagtattgactttggagagtctggtgactatatgccttggtgatattcattttgtacattatgttgcaggtgttctctggttttcttatatctggatatctacctctctagcaatattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatctcttttaaaatgatttttgtctgagttagtctgaaaaagcagtcttcagtccaggtgcagtggctcacgcctgtaatcccagcactttgggaggctgatgcaggcggatcacgaggtcaggagattgagactatcctggctaacacagtgaaaccccatcactactaaaaatataaaaaattagcagggtgtggtgatgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccagaaggcggagcttgcagtgagccgagattgtgctactgtactccaaccggggtaatggagcaagactccatct-a--aaa-aaataaataaataaataaatcagtcttcaaactccaaattgcttttt-cttcttc-tt-------tttttt- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63037338 1078 - 75711847 gtgaggttttgatccagtcttggagctttttatggttgctttgaagtttctattttatcgttgctt--------------------tatgggatctgtgggttatgtacttaaatgtgtttctgtggtagctggtattgttcttgtgtttacatatttagaatttccttagcaatctcttgtaatgctaatctagtggtaacaagttcccttagtggttgcttgtctggaaaacattttatttttccttagtttat-aagcttactttggtgggacatgaaattcttggttggttggaatttcttgtctttgaaaatgctgaaagtatgtccccaatc----ctggctggtaagctttctgctaagaaatctgccattagcctgatggggttccttttgtacatgatttgacaattttctctaggtgcctttaagattttttctttagtattgactttggagagtctggtgactatatgccttggtgatattcattttgtacattatgttgcaggtgttctctggttttcttatatctggatatctacctctctagcaatattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatctcttttaaaattatttttgtctgagttagtctgaaaaagcagtcttcagtccaggtgcagtggctcacgcctgtaatcccagcactttgggaggctgatgcaggcggatcacgaggtcaggagattgagactatcctggctaacacagtgaaaccccatcactactaaaaatataaaaaattagcagggtgtggtgatgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccagaaggcggagcttgcagtgagccgagattgtgctactgtactccaaccggggtaatggagcaagactccatct-a--aaa-aaataaataaataaataaatcagtcttcaaactccaaattgcttttt-cttcttc-tt-------tttttt- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13590092 1079 - 18804593 gtgaggttttgatccagtcttggagctttttatggttgctttgaagtttctattttatcgttgctt--------------------taagggatctgtgggttatgtacttaaatgtgtttctgtggtagctggtattgttcttgtgtttacatatttagaattcccttagcaatctcttgtaatgctaatctagtggtaacaagttcccttagtggttgcttgtctggaaaacattttatttttccttagtttat-aagcttactttggtgggacatgaaattcttggttggttggaatttcttgtctttgaaaatgctgaaagtatgtccccaatc----ctggctggtaagctttctgctaagaaatctgccattagcctgatggggttccttttgtacatgatttgacaattttctctaggtgcctttaagattttttctttagtattgactttggagagtctggtgactatatgccttggtgatattcattttgtacattatgttgcaggtgttctctggttttcttatatctggatatctacctctctagcaatattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcatttttttaaatctcttttaaaattatttttgtctgagttagtctgaaaaagcagtcttcagtccaggtgcagtggctcacgcctgtaatcccagcactttgggaggctgatgcaggcggatcacgaggtcaggagattgagattatcctggctaacacagtgaaaccccatcactactaaaaatataaaaaattagcagggtgtggtgatgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccagaaggcggagcttgcagtgagccgagattgtgctactgtactccaactggggtaatggagcaagactccatct-a--aaa-aaataaataaataaataaatcagtcttcaaactccaaattgcttttt-cttcttcttt-------tttttt- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13206838 1079 + 18905526 gtgaggttttgatccagtcttggagctttttatggttgctttgaagtttctattttatcgttgctt--------------------tatgggatctgtgggttatgtacttaaatgcgtttctgtggtagctggtattgttcttgtgtttacatatttagaattcccttagcaatctcttgtaatgctaatctagtggtaacaagttcccttagtggttgcttgtctggaaaacattttatttttccttagtttat-aagcttactttggtgggacatgaaattcttggttggttggaatttcttgtctttgaaaatgctgaaagtatgtccccaatc----ctggctggtaaggtttctgctaagaaatctgccattagcctgatggggttccttttgtacatgatttgacaattttctctaggtgcctttaagattttttctttagtattgactttggagagtctggtgactatatgccttggtgatattcattttgtacattatgttgcaggtgttctctggttttcttatatctggatatctacctctctagcaatattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatctcttttaaaattatttttgtctgagttagtctgaaaaagcagtcttcagtccaggtgcagtggctcacgcctgtaatcccagcactttgggaggccgatgcaggcggatcacgaggtcaggagattgagactatcctggctaacacagtgaaaccccatcactactaaaaatataaaaaattagcagggtgtggtgatgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccagaaggcggagcttgcagtgagccgagattgtgctactgtacttcaacctgggcaatggagcaagactccatct-a--aaataaataaataaataaataaatcagtcttcaaactccaaattgcttttt-cttcttc-tt-------tttttt- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60036742 1085 - 72318688 gtgaggttttgatccagtcttggagctgttaatggttgctttgaagtttctattttatcgttgtataatatgtataatatgtataatatgggatctgtgggttatgtacttaaatgtgtttctgtggtagctggtattgttcttttgtttacctatttagaattcccttagcaatctcttgtaatgctaatctagtggtaacaagttcccttagt-gttgcttgtctggaaaacattttatttttccttagtttat-aagcttactttggtgggacatgaaattcttggttggttggaatttcttgtctttgaaaatgctggaagtatgtccccagtc----ctggctggtaaggtttctgctaagaaatatgctattagcctgatggggttccttttgtacataatttgacaattttctctaggtgcctttaagattttttcttaaa----------ggagagtctggtgactatatgccttgatgatatccattttgtacattatgttgcaggtgttctctggttttcttatatctcgatgtctacctctctagcaatattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaacaatttatcaccttggttgctttacatagtctcatatttcttgaagactgttcattttttaaaatcccttttaaaattatttttgtccgagttagtttgaaaaagcagtcttcagtccaggtgcagtggctcatgcctataatcccagcactttgggaggccgaggcaggtggatcacaaggtcaggagatcgagactatcctggctaacacagtgaaaccccatcattactaaaaatataaaaaattagcagggtgtggtggcgggagcctgtagttccagctacttgggaggctgaggcaggagaatggcgtgaacccagaaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggcaacggagcaagactctctct-----ca-aaataaataaataaataaatcagtcttcaaactccaaatttcttttt-cttcttt-tt-------tttttt- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 370350 1079 - 1517660 gtgaggttttgatccagtcttggagctttttatggttgctttgaagtttctattttatcgttgctt--------------------tatgggatctgtgggttatgtacttaaatgtgtttctgtggtagctggtattgttcttgtgtttacatatttagaattcccttagcaatctcttgtaatgctaatctagtggtaacaagttcccttagtggttgcttgtctggaaaacattttatttttccttagtttat-aagcttactttggtgggacatgaaattcttggttggttggaatttcttgtctttgaaaatgctgaaagtatgtccccaatc----ctggctggtaaggtttctgctaagaaatctgccattagcctgatggggttccttttgtacatgatttgacaattttctctaggtgcctttaagattttttctttagtattgactttggagagtctggtgactatatgccttggtgatattcattttgtacattatgttgcaggtgttctctggttttcttatatctggatatctacctctctagcaatattagaaaaactttcttgaattattccatcaaatatgttttccaggttgtttaccttttctccttttctctcaggaatgccaataatgtatcaccttggttgctttacatagtgtcatatttcttgaagactgttcattttttaaaatctcttttaaaattatttttgtctgagttagtctgaaaaagcagtcttcagtccaggtgcagtggctcacgcctgtaatcccagcactttgggaggccgatgcaggcggatcacgaggtcaggagattgagactatcctggctaacacagtgaaaccccatcactactaaaaatataaaaaattagcagggtgtggtgatgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccagaaggcggagcttgcagtgagccgagattgtgctactgtactccaacctgggcaatggagcaagactccatctaa--ata-aaataaataaataaataaatcagtcttcaaactccaaattgcttttt-cttcttc-tt-------tttttt- i manLeu1.NW_012106698v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I a score=-11692.000000 s hg38.chr18_GL383571v1_alt 108881 4 + 198278 tttt--- s panTro5.chr18 65018944 4 + 78221452 tttt--- i panTro5.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5357518 4 + 17472758 tttt--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139397614 4 - 152096393 tttt--- i nomLeu3.chr4 I 4 C 0 s rheMac8.chr18 57347021 2 + 70235451 ---t--g i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63038416 2 - 75711847 ---t--g i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13591171 2 - 18804593 ---t--g i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13207917 4 + 18905526 ---ttgg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60037827 4 - 72318688 ---tttt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 371429 4 - 1517660 ---tttt i manLeu1.NW_012106698v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e panPan2.chr18 64137696 305 + 77229886 I a score=5185760.000000 s hg38.chr18_GL383571v1_alt 108885 1104 + 198278 gacagggtctcactctgtcaccaaggctaaagtacagtggcatgatgtcagctcactgcaacctctgcctcccaggcccaagtgattctcctgcctcagcctcctgagtagctggggctacaggtgcctaccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgatcaggctggtcttgaactcctcaactcaagtgatccgctcacctcggcctctgaaagtgctggaattacaggcaggagtcaccatgactggcctctaaatttctttcttctgcttagtgaagtccattgataaaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgatttcttt-ttaacatgtttatattttccttcatttcctggactgattaagaaatttctatgtaatgattttcaaccttgtcttggctttcagtgaacttcctggctatctattctttgaattctttatctgtcatttttgagtttccatttggctaaggacctttgttggagagctagtgcaatcttttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggttccttctcatctggagacactggaacttctaatttttgtaattatttttttgtaggtagaacttttgtttttctttcttcccatgtaatattatgta-tattttttcttttcttttgcatttttttt-cctttcttagggggtgtgactgaagagaatattgggtagggtcttttggctttgcttctctgtagtcctatgcacttcttttggtgagtttttattaggctgtgcggtttgacctacaagccagtagatggtgcttatgagtaaaaggtggttgtagccaatgtgagcggatatatgctttatccttgcttactggagagagttctctgttgcctcatgcaatggacttatctttgaggtgcacagtggtctgagctccctgctcagtcctgggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggtcctgtgatggcaggcacaaacactactgccaaggg s panTro5.chr18 65018948 1105 + 78221452 gacagggtctcactctgtcaccaaggctaaagtacagtggcatgatgtcagctcactgcaacctctgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctggggctacaggtgcctaccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtcttgaactcctcaactcaagtgatccactcacctcggcctctaaaagtgctggaattacaggcaggagtcaccacgactggcctctaaatttctttcttctgcttagtgaagtccgttgataaaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgatttcttt-ttaacatgtttatattttccttcatttcctggactgattaagaaatttctatgtaatgattttcaaccttgtcttggctttcagtgaacttcctggctatctattctttgaattctttatctgtcatttttgagtttccatttggttaaggacctttgttggagagctagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggttccttctcatctggagacactggaacttctaatttttgtaattatttttttgtaggtagaacttttgtttttctttcttcccatgtaatattatata-tagtttttcttttcttttgcatttttttttcctttcttagggggtgtgactgaagagaatattgggtagggtcttttggctttgcttctctgtagtcctatgcacttcttttggtgagtttttattaggctgtgcggtttgacctacgagccagtagatggtgcttatgagtaaaaggtggttgtagccaatgtgagcggatatatgctttatccttgcttactggagagagttctctgttgcctcatgcaatggacttatctttgaggtgcacagtggtctgagctccctgctcagtcctgggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggtcctgtgatggcaggcacaaacactactgccaaggg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64138001 1103 + 77229886 gacagggtctcactctgtcaccaaggctaaagtacagtggcatgatgtcagctcactgcaacctctgcctcccaggctcaagtgattctcttgcctcaggctcctgagtagctggggctacaggtgcctaccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtcttgaactcctcaactcaagtgatccactcacctcggcctctgaaagtgctggaattacaggcaggagtcaccacgactggcctctaaatttctttcttctgcttagtgaagtccgttgataaaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgatttatttcttt-ttaacatgtttatattttccttcatttcctggactgattaagaaatttctatgtaatgattttcaaccttgtcttggctttcagtgaacttcctggctatctattctttgaattctttatctgtcatttttgagtttccatttggttaaggacctttgttggagagctagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggttccttctcatctggagacactggaacttctaatttttgtaattatttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-tattttttcttttcttttgcattttttt--cctttcttagggggtgtgactgaagagaatattgggtagggtcttttggctttgcttctctatagtcctatgcacttcttttggtgagtttttattaggctgtgcggtttgacctacaagccagtagatggtgcttatgagtaaaaggtggttgtagccaatgtgagtggatatatgctttatccttgcttactggaaagagttctctgttgcctcatgcaatggacttatctttgaggtgcacagtggtctgagctccctgctcagtcctgggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggtcctgtgatggcaggcacaaacactactgccaaggg i panPan2.chr18 I 305 C 0 s gorGor5.CYUI01014964v1 5357522 1093 + 17472758 gacagggtctcactctgtcaccaaggctaaagttcagtggcatgatgtcagctcactgcaacctctgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctg--------ggtgcctaccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtcttgaactcctcaactcaagtgatccactcacctcggcctccgaaagtgctggaattacaggcaggagtcaccatgactggcctttaaatttctctcttctgcttagtgaagtccgttgataaaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgatttcttt-ttaacatgtttatattttccttcatttcctggactgattaagaaatttctatgtaatgattttcaaccttgtcttggctttcagtgaacttcctggctatctattctttgaattctttatctgtcatttttgagtttccatttggttaaggacctttgttggagagctagtgcaatcctttggtggtgtcactacattcagattttttatggcgccagatttcatgcactggttccttctcatctggagacactggaacttctaatttttgtaat--tttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-tattttttcttttcttttgcatttttttt-cctttctt-gggggtgtgactgaagagaatattgggtagggtcttttggctttgcttctctatagtcctacgcacttcttttggtgagtttttattaggctgtgcggtttgacctacaagccagcagatggtgcttatgagtaaaaggtggttgtagccaatgtgagtggatatatgctttatccttgcttactggaaagagttctctgttgcctcacgcaatggacttatctttgaggtgcacagtggtctgagctccctgctcagtcctgggggtgtggtgaaaagatgga-------cagggctggactgggtaggcctacctacaggttctgtgatggcaggcacaaacactactgccaaggg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139397618 1107 - 152096393 gacagggtctcactctgtcaccaaggctgaagtgcagtggcatgatctcagctcactacaacctctgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctggggctacaggtgcctaccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtctcaaactcctcaattcaagtgatccactcacctaagcctccgaaagtgctggaattacaggcaggagtcaccatgactggcctctaaatttctttcttctgcttagtgaagtccgttgataaagatttcacttgtattttgaaaatctttgagtttttcaacttcagaagccctgattcatttttttaaaaacatgtttatattttccttcatttcctggactgattaagaggtttctatgtaatgattttcaaccttgtcttggctttcagtgagcttcctggctatctattctttgaattctttgtctgtcatttttgagtttccatttggttaaggacctttgctggagagctagtgcaatcctttggtgttgtcactacattcagattttttatggtgccagatttcatgcactggttccttctcatctggagacattggaacgtctaatttttgtaat--tttttttgtaggtagaacttttgtttttcttcctttccatgtaatattatcta-c--tttttcttttcttttgccttttttt--cctttcttagggggtgtgacggaagagaatattgggtagggtcttttggctttgcttctctatagtcctatgcacttcttttggtgattttttattaggctgtgcggtttgacctacaagccagtagatggcgcttatgagtaaaaggtggttgtggccaatgtgggtgggtatatacttgatccttgcttactggaaagagctctctgttgcctcaggcaatggacttatcttcgaggtgcacagtggtctgagctccctgctcagtcctgggggcatggcggaaagatggactgagtccagggctggactgagtaggcatacctacgggtcctgtgatggcaggcacaaacactactgcgaaggg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57347023 1098 + 70235451 gatggagtctcactctgtcaccaaggctaaagtgcagtggcatgatctcggctctctgcaacctccgcctcccaggctcaagtgattctcctacctcagcctcctgagtagctggggctacaggtgcctgccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtctcgaactcttcaattcaagagatccactcaccttggcctccgaaagtgctggaattacaggcaggaatcaccatgactgaactctacatttctttcttctgcttagtgaagtccgttgatagaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgagttattt-ttaacgtgtttatatcttccttcatttcttggactgattaagaagtttctacgtaatgattttcaaccttgtcttggctttcagtgagcttcctggctatctattctttgaattctttgtctgtcatttttgagtttccatttggttaaggacgtttgctggagagtgagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggtttcttctcatctaccgacattggaacttctaatttttgtaatcatttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-t--tttttcttttcttttgccttctttt--cctttcttagggagtgtgactgaagaaaatattgggtagggtcttttggctttgcttctccatagtcctatgcacttcttttcgttattttttatcaggctgtgcggtttgacctacaagccagtagacggcgcttgt-agt-aaaggtgtttgtggccagtgtg-gtgggtatatacttgatctttgcttactggaaagagctctctgttgcctcaggcagtgggcttatctttgaggtgcacagtgttctgagctccctgcttagtcctaggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggcactgtgatggcaggcacaaactctactgccaaggg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63038418 1098 - 75711847 gatggagtctcactctgtcaccaaggctaaagtgcagtggcatgatctcggctctctgcaacctccgcctcccaggctcaagtgattctcctacctcagcctcctgagtagctggggctacaggtgcctgccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtctcgaactcttcaattcaagagatccactcaccttggcctccgaaagtgctggaattacaggcaggaatcaccatgactgaactctacatttctttcttctgcttagtgaagtccgttgatagaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgagttattt-ttaacgtgtttatatcttccttcatttcttggactgattaagaagtttctacgtaatgattttcaaccttgtcttggctttcagtgagcttcctggctatctattctttgaattctttgtctgtcatttttgagtttccatttggttaaggacgtttgctggagagtgagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggtttcttctcatctaccgacattggaacttctaatttttgtaatcatttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-t--tttttcttttcttttgccttctttt--cctttcttagggagtgtgactgaagaaaatattgggtagggtcttttggctttgcttctccatagtcctatgcacttctttttgttattttttatcaggctgtgcggtttgacctacaagccagtagacggagcttgt-agt-aaaggtgtttgtggccagtgtg-gtgggtatatacttgatctttgcttactggaaagagctctctgttgcctcaggcagtgggcttatctttgaggtgcatagtggtctgagctccctgcttagtcctaggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggcactgtgatggcaggcacaaacactactgccaaggg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13591173 1098 - 18804593 gatggagtctcactctgtcaccaaggctaaagtgcagtggcatgatctcggctctctgcaacctccgcctcccaggctcaagtgattctcctacctcagcctcctgagtagctggggctacaggtgcctgccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtctcgaactcttcaattcaagagatccactcaccttggcctccgaaagtgctggaattacaggcaggaatcaccatgactgaactctacatttctttcttctgcttagtgaagtccgttgatagaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgagttattt-ttaacgtgtttatatcttccttcatttcttggactgattaagaagtttctacgtaatgattttcaaccttgtcttggctttcagtgagcttcctggctatctattctttgaattctttgtctgtcatttttgagtttccatttggttaaggacgtttgctggagagtgagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggtttcttctcatctaccgacattggaacttctaatttttgtaatcatttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-t--tttttcttttcttttgccttctttt--cctttcttagggagtgtgactgaagaaaatattgggtagggtcttttggctttgcttctccatagtcctatgcacttcttttcgttattttttatcaggctgtgcggtttgacctacaagccagtagacggcgcttgt-agt-aaaggtgtttgtggccagtgtg-gtgggtatatacttgatctttgcttactggaaagagctctctgttgcctcaggcagtgggcttatctttgaggtgcacagtggtctgagctccctgcttagtcctaggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacatacaggcactgtgatggcaggcacaaacactactgccaaggg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13207921 1098 + 18905526 gatggagtctcactctgtcaccaaggctaaagtgcagtggcatgatctcggctctctgcaacctccgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctggggctacaggtgcctgccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctgctctcgaactcttcaattcaagagatccactcaccttggcctccgaaagtgctggaattacaggcaggaatccccatgactgaactctacatttctttcttctgcttagtgaagtccgttgatagaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgagttattt-ttaatgtgtttatatcttccttcatttcttggactgattaagaagtttctacgtaatgattttcaaccttgtcttggctttcagtgagcttcctggctatctattctttgaattctttgtctgtcatttttgagtttccatttggttaaggacgtttgctggagagtgagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggttccttctcatctaccgacattggaacttctaatttttgtaatcatttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-t--tttttcttttcttttgccttctttt--cctttcttagggagtgtgactgaagaaaatattgggtagggtcttttggctttgcttctccatagtcctatgcacttcttttcgttattttttatcaggctgtgcggtttgacctacaagccagtagacggcgcttgt-agt-aaaggtgtttgtggccagtgtg-gtgggtatatacttgatctttgcttactggaaagagctctctgttgcctcaggcagtgggcttatctttgaggtgcacagtgatctgagctccctgcttagtcctaggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggcactgtgatggcaggcacaaacactactgccaaggg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60037831 1095 - 72318688 tttggagtctcactctgtcaccaaggctaaagtgcagtggcatgatctcagctctctgtaacctctgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctggggctacaggtgcctgccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggttggtcttgaactcctcaattcaagtgatccactcacctcggcctccagaagtgctggaattacaggcaggaatcaccatgactgaactctacatttctttcttcagcttagtgaagtccgttgataaaggtttcacctgtattttgaaaatctttgagtttttcaactttagaagctctgattgatttattt-ttaacatgtttatattttccttcatttcttggactgattaagaagtttctatgtaatgattttcaaccttgtcttagctttcagtgagcttcctggctatc----ctttgaattctttatctgtcatttttgagtttccatttggctaaggacctttgctggagagtgagtgcaatcctttggtggtgtcgctacattcagattttttatggtgccagatttcatgcactggttccttctcatctaccaacattggaatttctaatttttataattatttttttgtaggtagaacttttgtttttctttctttccatgtaatattatatatt--tttttcttttcttttgccttctttt--cctttcttagggagtgtgactgaagaaaatattgggtagggtcttttggctttgcttctccatagtcctatgcacttcttttcgttattttttatcaggctgcgtggtttgacctacaagccagtagacggcgcttgt-agt-aagggtgtttgtggccaatgtg-gtgggtatatacttgatctttgcttactgaaaagagctctctgttgcctcaggcagtgggcttatctttgaggtgcacagtggtctgagctccctgcttagtcctaggggtatggtggaaagatgga-------cagggctggactgggtaggtctacctacaggtactgtgatagcaggcacaaacactactgccaaggg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 371433 1098 - 1517660 gatggagtctcactctgtcaccaaggctaaagtgcagtggcatgatctcggctctctgcaacctccgcctcccaggctcaagtgattctcctgcctcagcctcctgagtagctggggctacaggtgcctgccaccatgcccagctaatttttatatttttagtagagataaggtttcaccatgttgaccaggctggtctcgaactcttcaattcaagagatccactcaccttggcctccgaaagtgctggaattacaggcaggaatcaccatgactgaactctacatttctttcttctgcttagtgaagtccgttgatagaggtttcacttgtattttgaaaatctttgagtttttcaacttcagaagctctgattgagttattt-ttaacgtgtttatatcttccttcatttcttggactgattaagaagtttctacgtaatgattttcaaccttgtcttggctttcagtaagcttcctggctatctattctttgaattctttatctgttatttttgagtttccatttggctaaggacctttgctggagagcgagtgcaatcctttggtggtgtcactacattcagattttttatggtgccagatttcatgcactggttccttctcatctaccgacattggaacttctaatttttgtaatcttttttttgtaggtagaacttttgtttttctttctttccatgtaatattatata-t--tttttcttttcttttgccttctttt--cctttcttagggagtgtgactgaagaaaatattgggtagggtctttcggctttgcttctccatagtcctatgcacttcttttcgttattttttatcaggctgtgcggtttgacctacaagccagtagacggcgcttgt-agt-aaaggtgtttgtggccagtgtg-gtgggtatatacttgatctttgcttactggaaagagctctctgttgcctcaggcagtgggcttatctttgaggtgcacagtggtctgagctccctacttagtcctaggggtgtggtggaaagatgga-------cagggctggactgggtaggcctacctacaggcactgtgatggcaggcacaaacactactgccaaggg i manLeu1.NW_012106698v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I a score=8595.000000 s hg38.chr18_GL383571v1_alt 109989 2 + 198278 ag s panTro5.chr18 65020053 2 + 78221452 ag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64139104 2 + 77229886 ag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5358615 2 + 17472758 ag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139398725 2 - 152096393 ag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57348121 2 + 70235451 ag i rheMac8.chr18 C 0 I 104 s macFas5.chr18 63039516 2 - 75711847 ag i macFas5.chr18 C 0 I 104 s macNem1.NW_012016688v1 13592271 2 - 18804593 ag i macNem1.NW_012016688v1 C 0 I 104 s cerAty1.NW_012001075v1 13209019 2 + 18905526 ag i cerAty1.NW_012001075v1 C 0 I 105 s manLeu1.NW_012106698v1 372531 2 - 1517660 ag i manLeu1.NW_012106698v1 C 0 I 104 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e chlSab2.chr18 60038926 0 - 72318688 C a score=247978.000000 s hg38.chr18_GL383571v1_alt 109991 305 + 198278 aatccagtgggaagccaccaagtgcccagaggtgtacatagttctggagttagaaacctccttggcgccaagttctctgcatggggagggggacgcagcctaaactccacatccaggagagtgggagttccagatgcctgaagatctgcctgggcatgaagcagatagagcctc--------------ctgcacaggaaggctgggtaactgaggctactgaaccaggcaagcaggtgctccaggtgcctgaaaatctgcctggatgtgaagcaaagagggccccctgaacccagatctctccacaagaatggtagagc s panTro5.chr18 65020055 254 + 78221452 aatccagtgggaagccaccaagtgcccagaggtgtacatagttctggagttagaaacctccttggcgccaagttctctgcatggggagggggaggcagcct--------------------------------------------------gggcatgaagaagatagagcctc--------------ctgcacaggaaggctgggtaactgaggctactgaaccaggcaagcaggtgctccaggtgcctgaaa-tctgcctggatgtgaagcaaagagggccccctgaacccagatctctccacaagaatggtagagc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64139106 305 + 77229886 aatccagtgggaagccaccaagtgcccagaggtgtacgtagttctggagttagaaacctccttggcgccaagttctctgcatgggcagggggaagcagcctaaactccatatccgggagagtgggagttccagatgcctgaagatctgcctgggcatgaagcagatagagcctc--------------ctgcacaggaaggctgggtaactgaggctactgaaccaggcaagcaggtgctccaggtgcctgaaaatctgcctggatgtgaagcaaagagggccccctgaacccagatctctccacaagaatggtagagc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5358617 305 + 17472758 aatccagtgggaagccaccaagtgcccagaggtgtacgtagttctggagttagaaacctccttggcgccaagttctctgcatggggagggggaggcagcctaaactccacatccaggagagtgggagttccagatgcctgaagatctgcctgggcatgaagcagatagagcctc--------------ctgcacaggaaggctgggtaactgaggctaccgaaccaggcaagcaggtgctccaggtgcctgaaaatctgcctggatgtgaagcaaagaggcccccctgaacccagatctctccacaagaatggtagagc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139398727 319 - 152096393 aatccagtgggaagccaccaagtgcccagaggtgtacctagttctggagttagaaacctccttggccccaagttctctgcatggggagggggaggcagcctaaactccacattcaggagagtgggcgttccagatgcctgaagatctgcctgggcatgaagcagatagagcctcctgcatcaccatctctgcacaggaagggtgagtaactgaggctactgaaccaggcaagcaggtgctccagatgcctgaaaatctgcctggatgtgaagcagagagggccccctgaacccagatctctccacaagaatgtcagggc i nomLeu3.chr4 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3466892 5831 + 6513552 I e manLeu1.NW_012106698v1 372533 104 - 1517660 I e chlSab2.chr18 60038926 0 - 72318688 C e cerAty1.NW_012001075v1 13209021 105 + 18905526 I e macNem1.NW_012016688v1 13592273 104 - 18804593 I e macFas5.chr18 63039518 104 - 75711847 I e rheMac8.chr18 57348123 104 + 70235451 I a score=5081846.000000 s hg38.chr18_GL383571v1_alt 110296 911 + 198278 agctcaggctgctcatccaggcaagtgggtgctccacatggctgaagacctgcttaggtgggaagtggagagggcctcctgcaccacagtttctgcataggaagggtgagagagctcgggctgctgggccaggcaagcaggcactctgaatgtctagagttctgactggagactcagcagagaggactcca-ctgcaccacaatctcaggggagcagtctggaccacccagcaaggacatatacatgctggttccacatagccacattggccctggctgcaagtctcttcaaccaggagaaaccacagctgttgcagctcccctcccactccaggcttgtgatgggg-agagcacaattctgctggggcattgtccataatttttgctgtggaagcctctatcctgcttcagagaaggcattccaatcttcaacctgagactaaatgtctgaggaatcatgctgcaagatcaccaaagaatgactttgtatgcacgcttatcaaaaatagcatcctacttgctcatgggtctgggaaaatgcctgcagcttttcctgatgtctttccttctgggtgcctccaatcctctccccaaattagctccagagtttgggagaaacaaaagggttctttcctggcctaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtgtgtctctcccacgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcaatctcctcttggggatctggggtgtccttcataatttaggtgggttcttgttttccttctggaattaaagctcacagagttaatctttatgtactaccttgctatttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttgg s panTro5.chr18 65020309 910 + 78221452 agctcaggctgctcatccaggcaagtgggtgctccacatggctgaagacctgcttaggtgggaagtggagagggcctcctgcaccacagtttctgcataggaagggtgggacagctcgggctgctgggccaggcaagcaggcactctgaatgcctagagttctgactggagactcagcagagaggactcca-ctgcaccacaatctcaggggagcagtctggaccacccagcaaagacatatacatgctggttccacatagccacattggccctggctgcaagtctcttcaaccaggagaaaccacagctgttgcagctcccctcccactccaggcttgtgatgggg-agagcacaattctgctggggcgttgtccataatttttgctgtggaagcctctatcctgcttcagagaaggcattccaatcttcaacctgagactaaatgtctgaggaatcatgctgcaagatcaccaaagaatgactttgtatgcacgcttatcaaaaacagcatcctacttgctcatgggtctgggaaaatgcctgcagcttttcctgatgtctttccttctgggtgcctccaatcctctccccaaattagctccagagtttgggagaaacaaa-gggttctctcctggcctaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtgtgtctctcccacgctggggcttcactcacttttgtcagccaaataccatcataagggctgtttgcctgcaatctcctcttggggatctggggtgtccttcataatttaggtgggttcttgttttccttctggaattaaagctcacagagttaatctttatgtactaccttgctatttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttgg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64139411 910 + 77229886 agcttaggctgctcatccaggcaagtgggtgctccacatggctgaagacctgcttaggtgggaagtggagagggcctcctgcaccacagtctctgcacgggaagggtgggacagctcgggctgctgggccaggcaagcaggcactctgaatgcctagagttctgactggagactcagcagagaggactcca-ctgcaccacaatctcaggggagcagtctggaccacccagcaaggacatatacatgctggttccacatagccacattggccctggctgcaggtctcttcaaccaggagaaaccacagctgttgcagctcccctcccactccaggcttgtgatgagg-agagcacaattctgctggggcattgtccataatttttgctgtggaagcctctatcctgcttcagagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaagatcacgaaagaatgactttgtatgcacgcttatcaaaaatagcatcctacttgctcatgggtctgggaaaatgcctgcagcttttcctgatgtctttccttctgggtgcctccaatcctctccccaaattagctccagagtttgggagaaacaaa-gggttctctcctggcctaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtgtgtctctcccacgctggggcttcactcagttttgtcagccaaataccatcataagggctgtttgtctgcagtctcctcttggggatctggggtgtccttcataatttaggtgggttcttgttttccttctggaattaaagctcacagagttaatctttatgtactaccttgctatttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttgg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5358922 909 + 17472758 agctcaggctgctcatccaggcaagtgggtgctccacatggctgaagacctgcttaggtgggaagtggagagggcctcctccaccacagtttctgcacaagaagggtgggacagcttgggctgctgggccaggcaagcaggcactctgaatgcctagagttctgactggagattcagcagagaggactcca-ctgcaccacaatctcaggggagcagtctggaccacccagcaaggacatatacatgctggttccacatagccacattggccctggctgcaagtctcttcaaccaggagaaaccacagctgttgccgctctcctcccactccaggcttgtgatgggg-agagcacaattctgctggggcgttgtccataatttttgctgtggaagcctctatcctgcttcagagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaagatcaccaaagaatgactttgtatgcacgcttatcaaaaatagcatcctacttgctcatgggtctgggaaaatgcctgcagcttttcctgatgtctttccttctgggtgcctccaatcctct-cccaaattatctccagagtttgggagaaacaaa-gggttctctcctggcctaggctgctcagatccccagtgaaaaagtgagtcacagagggaggttgtgtgtctctcccacgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcaatctcctcttggggatctggggtgtccttcataatttaggtgggttcttgttttccttctggaattaaagctcacagagttaatctttatgtactaccttgctatttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139399046 910 - 152096393 agctcaggctgctgatccaggcaagtgggtgctccaaatggctgaagacctgcttaagtgggaagtggagagggcctcctgcaccacaatctctgcataggaagggttggacagcttgggctgctgggccaggcaagcaggcactctgaatgcctggagttctgactggaggctcagcagagaggactcca-ctgcatcaccatctcagaggagcagtccggaccacccagcaaggacacacacatgctggttccacatagccacattggccctggctgcaagtctcatcaaccaggagaaaccacagctgttgcagctctcctcccactccaggcttgtgatgggg-aaagcacaattctgctggggcattgtccataatttttgttgtggaagcctctatcctgcttcagagaaggcattccaatctggaacctgagactaaacatctgaggaaccatgctgtaaggtcaccaaagaatgactttgtatgcaccctaatcaaaaatagcatcctacttgctcatgggtctgggaaaatgcctgcagcttttcctgatgtctttccctctgggtgcctccaatcctctccgcaaattagctccagggtttgggagaaacaaa-gggttctcccctggcctagcctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtctgtctctgtcacgctggggcttcactcacttttgtcagccaaataccatcaaaaggactgtttgcctatgttctcctctttgggatctggggtgtccttcatgatttaggtggggtcctgttttccttctggaattaaagctcacagagttaatctttatgcactatcttgctatttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttcg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57348227 913 + 70235451 agctcaggttgctgatccaggcaagtgggtgctccaaatggctgaagacctgtttaggtgggaagtggagagggcctcctgtaccacagtctctgcacaggaagggtgggacagttcgggctgctgggcgaggcaagcaggcactctgaatgcctggatttctgactggaggctcagcagagaggactcca-ctgcaccacaatctcag-ggagctggctggagcatctagcaaggacacacacatgctggttccacatagccacattggccctggctgcaagtctcatcaaccaggataaaccacagctgttgcatctctcttcccaccccacgcctgtgatgggggagagcacaattctgctggggcgttgtccacaatttttgttgtggaagcctctatcctgcttctgagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcatcctacttactcatgggtctgggaaaatgcccgtagcttttcctgacgtctttccctctgggtgcctccaatcttctccccaaattagctccagggtttgggggaaacaaa-gggttctcccctggcttaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtctgtctctctcacgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcgttctcctcctcgggatctggtgtgtccctcatgatttaggtgggttcctgttttccttctggaattaaagctcgcagagttaatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcctcttctaaaccaccatctttgg i rheMac8.chr18 I 104 C 0 s macFas5.chr18 63039622 913 - 75711847 agctcaggttgctgatccaggcaagtgggtgctccaaatggctgaagacctgtttaggtgggaagtggagagggcctcctgtaccacagtctctgcacaggaagggtgggacagttcgggctgctgggccaggcaagcaggcactctgaatgcctggatttctgactggaggctcagcagagaggactcca-ctgcaccacaatctcag-ggagctggctggagcatctagcaaggacacacacatgctggttccacatagccacattggccctggctgcaagtctcatcaaccaggataaaccacagctgttgcatctctcttcccaccccacgcctgtgatgggggagagcacaattctgctggggcgttgtccacaatttttgttgtggaagcctctatcctgcttctgagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcatcctacttactcatgggtctgggaaaatgcccgtagcttttcctgacgtctttccctctgggtgcctccaatcttctccccaaattagctccagggtttgggggaaacaaa-gggttctcccctggcttaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtctgtctctctcacgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcgttctcctcctcgggatctggtgtgtccctcatgatttaggtgggttcctgttttccttctggaattaaagctcgcagagttaatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcctcttctaaaccaccatctttgg i macFas5.chr18 I 104 C 0 s macNem1.NW_012016688v1 13592377 913 - 18804593 agctcaggttgctgatccaggcaagtgggtgctccaaatggctgaggacctgtttaggtgggaagtggagagggcctcctgtaccacagtctctgcacaggaagggtgggacagttcaggctgctgggccaggcaagcaggcactctgaatgcctgaatttctgactggaggctcagcagagaggactcca-ctgcaccacaatctcag-ggagctggctggagcatctagcaaggacacacacatgctggttccacatagccacattggccctggctgcaagtctcatcaaccaggataaaccacagctgttgcatctctcttcccaccccacgcctgtgatgggggagagcacaattctgctggggcgttgtccacaatttttgttgtggaagcctctatcctgcttctgagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcatcctacttactcatgggtctgggaaaatgcccgtagcttttcctgacgtctttccctctgggtgcctccaatcttctccccaaattagctccagggtttgggggaaacaaa-gggttctcccctggcttaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtctgtctctctcacgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcgttctactcctcaggatctggtgtgtccctcatgatttaggtgggttcctgttttccttctggaattaaagctcgcagagttaatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcctcttctaaaccaccatctttgg i macNem1.NW_012016688v1 I 104 C 0 s cerAty1.NW_012001075v1 13209126 910 + 18905526 agctcaggttgctgatccaggcaagtgggtgctccaaatggctgaagacctgtttaggtgggaagtggagagggcctcctgtaccacagtctctgcacaggaagggtgggacagttcgggctgctgggccaggcaagcaggcaccctgaatgcctggagttctgactggaggctcagcagagaggactcca-ctgcaccacaatctcag-ggagctggctggagcatccagcaaggacacacacatgctggttccacatagccacactggccctggctgcaagtctcatcaaccaggataaaccacagctgttgcatctctcgtcccaccccacgcctgtgatgggggagagcacaattctgctggggcgttgtccacaatttttgttgtggaagcctctatcctgcttctgagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcatcctacttactcatgggtctgggaaaatgcccgtagcttttcctgatgtctttccctctgggtgcctccaaacctctccccaaattagctccagagtttgggggaaacaaa-gggttctcccctggcttaggctgctcagatccccagtgaaaatgtgagtcacagatggaggctgtctgtctctctcacactggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcgttctcctcttcgggatctggtgtgtccctcatgatttaggtgggttcctgttttccttctggaattaaagctcgcagagttcatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttgg i cerAty1.NW_012001075v1 I 105 I 25 s chlSab2.chr18 60038926 909 - 72318688 agctcaggttgctgatccaggcaagtgggtgctccaaatggctaaagacctgtttaggtgggaagtggagagggcctcctgtaccactgtctctgcacaggaagggt-ggacagctcgggctgctgggccaggcaagcaggcactctgaatgcctggagttctgactggaggctcagcagagaggactcca-cttcaccacaatctcag-ggagctggctggagcatccagcaaggacacacacatgctggttccacatagccatattggccctggctgcaaatttcatcaaccaggagaaaccacagctgttgcagctctcttcccaccccacgcctgtgatgggggagagcacaattctgttggggcattgtccataatttttgttgtggaagcttctatcctgcttctgagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcatcctacttactcatgggtctgggaaaatgcctgcagcttttcctgatgtctttccctctgggtgcctccaatcttctccccaaattagctccagagtttgggggaaacaaa-gggttctcccctggcttaggctgctcagatccccagtgaaaaagtgagtcacagagggaggctgtctgtctctctcacgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcgttctcctcttcgggatctggtgtgtccctcgtgatttaggtgggttcctgtttttcttctggaattaaagctcgcagagttaatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcc---tctaaaccaccatctttgg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 372637 813 - 1517660 agctcaggttgctgatccaggcaagtgggtgctccaaatggctgaagacctgtttaggtgggaagtggagagggcctcctgtaccacagtctctgcacaggaagggtgggacagttcgggctgctgggccaggcaagcaggcactctgaatgcctggagttctgactggaggctcagcagagaggactcca-ctgcaccacaatctcag-ggagctggctggagcatccagcaaggacacacacatgctggttccacatagccacattggccctggctgcaagtctcatcaaccagga---------------------------------------------------------------------------------------------taagcctctatcctgcttctgagaaggcattccaatcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcatcctacttactcatgggtctgggaaaatgcccgtagcttttcctgatgtctttccctctgggtgcctccaaacctctcccaaaattagctccagagtttgggggaaacaaa-gggttctctcctggcttaggctgctcagatccccagtgaaaatgtgagtcacagatggaggctgtctgtctctctcacgctggggcttcactcacttttgtcagccaaata-catcacaagggctgtttgcctgcgttctcctcttcgggatctggggtgtccctcatgatttaggtgggttcctgttttccttctggaattaaagctcgcagagttcatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcc---tctaa---accatctttgg i manLeu1.NW_012106698v1 I 104 I 25 s colAng1.NW_012115433v1 3472723 910 + 6513552 agctcaggctgctgatccaggcaagtgggtgctccaaatggctgaagactt-tttaggtgggaagtggagagggcctcctgtaccacagtctctgcacaggaagggtgggacagcttgggctgctgggccaggcaagtcggcactctgaatgcctggagttctgactagaggctcagcagagaggactccacctgcaccacaatctcag-ggagctggctggagcatccagcaaggacgcacacatgctggttccacatagccacattggccctggctgcaagtctcatcaaccaggagaaaccacagctgttgcatctctcttcccaccccacgcctgtgatggggaagagcacaattctgctggggcattgtccatgatttttgttgtggaagcctctatcctgcttctgagaagacattccagtcttcaacctgagactaaatgtctgaggaaccatgctgcaaggtcaccaaataatgactttgtatgcacccttatcaaaaatagcttcctacttgctcatgggtctgggaaaatgcctgcagcttttcctaatgtctttccctctgggtgcctccaatcctctccccaaattagctccagagtttgggggaaacaaa-gggttctcccctggcttaggctgctctgatccccagtgaaaaagtgagtcacagatggaggctgtctgtctctctcatgctggggcttcactcacttttgtcagccaaataccatcacaagggctgtttgcctgcattctcctcttcgggatctggggtgtccctcatgatttaggtgggttcctgttttccttctggaattaaagctcacagagttaatctttatgcactatcttgctgtttccaagtggctgaggtacactgaaagcc---tctaaaccacaatctttgg i colAng1.NW_012115433v1 I 5831 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=22520.000000 s hg38.chr18_GL383571v1_alt 111207 10 + 198278 TGGCAGGGGG s panTro5.chr18 65021219 10 + 78221452 GGGCAGGGGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140321 10 + 77229886 GGGCAGGGGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5359831 10 + 17472758 GGGCAGGGGG i gorGor5.CYUI01014964v1 C 0 I 8 s nomLeu3.chr4 139399956 8 - 152096393 ggg--ggaaa i nomLeu3.chr4 C 0 I 8 s rheMac8.chr18 57349140 10 + 70235451 GGACGGCGGG i rheMac8.chr18 C 0 I 15 s macFas5.chr18 63040535 10 - 75711847 GGACGGCGGG i macFas5.chr18 C 0 I 15 s macNem1.NW_012016688v1 13593290 10 - 18804593 GGACGGCGGG i macNem1.NW_012016688v1 C 0 I 15 s chlSab2.chr18 60039835 10 - 72318688 GGGCGGCGGG i chlSab2.chr18 C 0 I 13 s colAng1.NW_012115433v1 3473633 10 + 6513552 GGGCGGCGGG i colAng1.NW_012115433v1 C 0 I 13 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e manLeu1.NW_012106698v1 373450 25 - 1517660 I e cerAty1.NW_012001075v1 13210036 25 + 18905526 I a score=299320.000000 s hg38.chr18_GL383571v1_alt 111217 60 + 198278 AAAGAaacaacaacaa----aaacaaccaaacaaaaacCCTCTAATTTAAATTTTATGTTGTGT s panTro5.chr18 65021229 60 + 78221452 AAAGAaacaacaacaa----aaacaaccaaacaaaaacCCTCTAATTTAAATTTTATGTTGTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140331 60 + 77229886 AAAGAaacaacaacaa----aaacaaccaaacaaaaacCCTCTAATTTAAATTTTATGTTGTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5359849 60 + 17472758 aaagaaacaacaacaa----aaacaaccaaacaaaaacCCTCTAATTTAAATTTTATGTTGTGT i gorGor5.CYUI01014964v1 I 8 C 0 s nomLeu3.chr4 139399972 60 - 152096393 AAAGAaacaacaacaa----aaacaaccaaacaaaaacCCTCTAATTTAAATTTTGTGTTGTGT i nomLeu3.chr4 I 8 C 0 s rheMac8.chr18 57349165 56 + 70235451 AAAGAaacaacaacaa----aaa----caaacaaaaacCCTCTAGTTTATATTTTGTGTTGTGT i rheMac8.chr18 I 15 C 0 s macFas5.chr18 63040560 56 - 75711847 aaagaaacaacaacaa----aaa----caaacaaaaacCCTCTAGTTTATATTTTGTGTTGTGT i macFas5.chr18 I 15 C 0 s macNem1.NW_012016688v1 13593315 56 - 18804593 aaagaaacaacaacaa----aaa----caaacaaaaacCCTCTAGTTTATATTTTGTGTTGTGT i macNem1.NW_012016688v1 I 15 C 0 s cerAty1.NW_012001075v1 13210061 56 + 18905526 aaagaaacaacaacaa----aaa----caaacaaacaCCCTCTATTTTATATTTTGTGTTGTGT i cerAty1.NW_012001075v1 I 25 C 0 s chlSab2.chr18 60039858 56 - 72318688 aaagaaacaacaacaa----aaa----caaacaaaaacCCTCTAGTTTATATTTTGTGTTGTGT i chlSab2.chr18 I 13 C 0 s manLeu1.NW_012106698v1 373475 56 - 1517660 aaagaaacaacaacca----aaa----caaacaaacaCCCTCTATTTTATATTTTGTGTTGTGT i manLeu1.NW_012106698v1 I 25 C 0 s colAng1.NW_012115433v1 3473656 60 + 6513552 aaagaaacaacaacaaaaacaaa----caaacaaaaacCCTCTAGTTTATATTTTGTGTTGTGT i colAng1.NW_012115433v1 I 13 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470121 0 - 2150887 C e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=473401.000000 s hg38.chr18_GL383571v1_alt 111277 79 + 198278 TTCATGGATCCAAGTGCAGAATAGACTTTGTCTGCT---ACAAGTTACATGAATATGGTAGACAGCCTTAAAAAGCTGGTAT s panTro5.chr18 65021289 79 + 78221452 TTCATGGATCCAAGTGCAGAGGAGACTTTGTCTGCT---ACAAGTTACATGAATATGGTAGACAGCCTTAAAAAGCTGGTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140391 79 + 77229886 TTCATGGATCCAAGTGCAGAGTAGACTTTGTCTGCT---ACAAGTTACATGAATATGGTAGACAGCCTTAAAAAGCTGGTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5359909 79 + 17472758 TTCATGGATCCAAGTGCAGAGTAGACTTTGTCTGCT---ACAAGTTACATGAATACGGTAGACAGCCTTAAAAAGCTGGTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400032 82 - 152096393 TTCATGGATCCAAGGGCAGAGTAGACTTTGGCTGCTACAACAAGTTACATGAATATGGTTGGAAGCCTTAAAAACCTGGCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349221 82 + 70235451 TTCATGGATCCAAGTGCAGACTAGACTTTGGCTGCTACAACAAGTTACATGAATATGGTAGACAGCCCTAAAAACCTGGTGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63040616 82 - 75711847 TTCATGGATCCAAGTGCAGACTAGACTTTGGCTGCTACAACAAGTTACATGAATATGGTAGACAGCCCTAAAAACCTGGTGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13593371 82 - 18804593 TTCATGGATCCAAGTGCAGACTAGACTTTGGCTGCTACAACAAGTTACATGAATATGGTAGACAGCCCTAAAAACCTGGTGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210117 82 + 18905526 TTCATGGATCCAAGTGCAGACTAGACTTTGGCTGCTATAACAAGTTACATGAACATGGTAGACAGCCCTAAAAACCTGGTGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60039914 82 - 72318688 TTCATGGATCCAAGTGCAGACTAGACTTTGGCTTCTACAACAAGTTACATGAATATGGTAGACAGCCCTAAAAACCTGGTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 373531 82 - 1517660 TTCATGGATCCAAGTGCAGACTAGACTTTGGCTGCTACAACAAGTTACATGAATATGGTAGACAGCCCTAAAAACCTGGTGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3473716 82 + 6513552 TTCATGGATCCAAGTGCAGACGAGACTTTGCCTGCTACAACAAGTTACATGAATGTGATAGACAGCCCTAAAAACCTGGTAT i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 470121 82 - 2150887 TTTTTTGATCCAAGCCCAAAATTGACATTAGCTGCTAGAGTAAGCTAAAAAAATATGGTGGACAGCCTTTAAAGCTTGGTAC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e canFam3.chr1 112290825 3 - 122678785 I e otoGar3.GL873546 11219545 310 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=1362592.000000 s hg38.chr18_GL383571v1_alt 111356 206 + 198278 AAAATAGGATGAAGTGGAAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAGAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaagctaagaattcctctaagaatactgatatattaacttgtttaatcctgagaactatcccgtgaagtgggGAGTatga s panTro5.chr18 65021368 206 + 78221452 AAAATAGGATGAAGTGGAAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaagctaagaattcctctaagaatactgatatattaacttgtttaatcctcagaactatcccgtgaagtggAGAGTatga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140470 206 + 77229886 AAAATAGGATGAAGTGGAAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaagctaagaattcctctaagaatactgatatattaacttgtttaatcctcagaactatcccgtgaagtggAGAGTatga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5359988 206 + 17472758 AAAATAGGATGAAGTGGAAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacacatattgagtacttacattaagctaagaattcctctaagaatactgatacattaacttgttttatcctcagaactatcccgtgaagtgggGAGTacga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400114 206 - 152096393 AAAATAGGGTGAAGCGGGAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatactgagcacttacattaagctaagaatacctctaagaatattgatatattaacttgtttaatactcagaaccatcccacgaagtgggGagtacga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349303 206 + 70235451 AAAATAGGACGAAGTGGGAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaggctaagaaatcctctaagaatattgatatattaacttgtttaatcctcagaaccatcccatgaagtgggGGGTacga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63040698 206 - 75711847 AAAATAGGACGAAGTGGGAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaggctaagaaatcctctaagaatattgatatattaacttgtttaatcctcagaaccatcccatgaagtgggGGGTacga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13593453 206 - 18804593 AAAATAGGACGAAGTGGGAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaggctaagaaatcctctaagaatattgatatattaacttgtttaatcctcagaaccatcccatgaagtgggGGGTacga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210199 206 + 18905526 AAAATAGGATGAAGTGGGAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaggctaagaaatcctctaagaatattgatatattaacttgtttaatcctcagaaccatcccatgaagtgggGGGTacga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60039996 206 - 72318688 AAAATAGGATGAAGTGGGAAAAG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaggctaagaaatcctctaacaatattgatatattaacttgtttaatcctcagaaccatcccatgaagtgggGAGTatga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 373613 206 - 1517660 AAAATAGGATGAAGTGGGAAAGG-AAGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtactcacattaggctaagaaatcctctaagaatattgatatattaacttgtttaatcctcagaaccatcccatgaagtgggGGGTacga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3473798 206 + 6513552 AAAATAGGATGAAGTGGGAAAGG-AGGTAAAAGTCTAATATTCTACCAATTTGGAAAACAAAAAGGCCCAGAAAAGCAAGATAGAAATAAATAATaataag---agttaacaaatattgagtacttacattaggctaagaattcctctaagaatattgacatattaacttgttcaatcctcagaaccatcccatgaagtgggGAGTacga i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11219855 189 - 20685099 aaaacaaaaaAAAACAG-AAAGG-AGGTAAAAGTCCAATATTCTACCAATTCAGAGAACACAGAGGACCA-AAAAGAGAGATAGAAATGCCTAGTAATAGGAATAGTTAACACACGT---GAGCCCACATGGA---------------AAGGATATTGGTATAGTAACCTATTTTGTCCTCAGAGTGACCCTACAAAGCAGGGATTatca i otoGar3.GL873546 I 310 C 0 s dasNov3.JH575754 470203 192 - 2150887 CAAACAAGAAAAAATGAGAAAGGAAAGTAAATGGCCAATATTCTACCAATGATTAAGACAGA------------------CCAGAAACCAATAGTGATaaaaatagtttaaatatattgaacacttccaatgaaccaagtacatctctgagtattttgatgggttaatttatttaatcctcataacaaccttatgatgcaggggctaGGA i dasNov3.JH575754 C 0 I 889 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e canFam3.chr1 112290825 3 - 122678785 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=598756.000000 s hg38.chr18_GL383571v1_alt 111562 99 + 198278 aactgaattctcatcttatgccacacacaaaagtcaatcagtt-gtaaaggcctacatctaaaggcaaaactcgaaaacttttgaaaaactatacaggag s panTro5.chr18 65021574 98 + 78221452 aactgaattctcatcttatgccacacacaaaagtcaatc-gtt-gtaaaggcccacatctaaaggcaaaactcgaaaacttttgaaaaactatacaggag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140676 99 + 77229886 aactgaattctcatcttatgccacacacaaaagtcaatcagtt-gtaaaggcctacatctaaaggcaaaactcgaaaacttttgaaaaactatacagcag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360194 99 + 17472758 aactgaattctcatcttatgccacacacaaaagtcaatcagtt-gtaaaggcctacatctaaaggtaaaactcaaaaacttttgaaaaactatacaggag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400320 99 - 152096393 aactgaattctcatcttacgccacacacaaaagtcaatcagtt-gtaaaggcctacatctaaaggtaaaactctaaaactcttgaaaaactatacgggag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349509 99 + 70235451 aactgaattctcatcttacgccacacacaagagtcagtcagtt-gtaaaggcctacatctaaagataaaactctaaaacttttgaaaacctatacggaag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63040904 99 - 75711847 aactgaattctcatcttacgccacacacaagagtcagtcagtt-gtaaaggcctacatctaaagataaaactctaaaacttttgaaaacctatatggaag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13593659 99 - 18804593 aactgaattctcatcttacgccacacacaagagtcagtcagtt-gtaaaggcctacatctaaagataaaactctaaaacttttgaaaacctatacggaag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210405 99 + 18905526 aactgaattctcatcttacgccacacacaagagtcagtcagtt-gtaaaggcctacatctaaagataaaactctaaaacttttgaaaacctatacggaag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040202 99 - 72318688 aactgaattctcatctaacgccacacacaagagtcagtcagtt-gtaaaggcctacatctaaagataaaactctaaaacttttgaaaacctataagggag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 373819 99 - 1517660 aactgaattctcatcttacgccacacacaagagtcagtcagtt-gtaaaggcctacatctaaagataaaactctaaaacttttgaaaacctatacggaag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474004 99 + 6513552 aactgaattcttatcttacgtcacacacaaaagtcagtcagtt-gtaaaggcctacatctaaaggtaaaactctaaaacttttgaaaacctataccggag i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11220044 100 - 20685099 aactgagttcccatattacaccacacacaaaagtgaatcaattggggaagactcaaatacgaaacaaaaactgtgaaacttttaaaagggtccaggggag i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112290825 3 - 122678785 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=364098.000000 s hg38.chr18_GL383571v1_alt 111661 58 + 198278 aatagtttactgaacaa-----c---tttttacacaaaacccaaaaggtacaacaaagaa----------------tgagaa s panTro5.chr18 65021672 58 + 78221452 aatagtttactgaacaa-----c---tttttacacaaaacccaaaaggtacaacaaagaa----------------tgagaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140775 58 + 77229886 aatagtttactgaacaa-----c---tttttacacaaaacccaaaaggtacaacaaagaa----------------tgagaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360293 58 + 17472758 aataGTTTACTGAACAa-----c---tttttacacaaaacccaaaaggtacaacaaagaa----------------tgagaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400419 74 - 152096393 aatagtttactgaataa-----c---ttattacacaaaacccaaaaggtacaacaaagaatgagaaatcaacaaagtgagaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349608 58 + 70235451 aatagcttACTGAACAA-----C---TTTTTACACAAAACCCAAAATGTACAACaaagac----------------tgagaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041003 58 - 75711847 aatagcttactgaacaa-----c---gttttacacaaaacccaaaatgtacaacaaagac----------------tgagaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13593758 58 - 18804593 aatagcttACTGAACAA-----C---TTTTTACACAAAACCCAAAATGTACAACAAAGAC----------------TGAGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210504 58 + 18905526 aatagcttACTGAACAA-----C---TTTTTACACAAAACCCAAAATGTACAACAAAGAC----------------TGAGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040301 58 - 72318688 aatagcttactgaacaa-----c---tttttacacaaaacccaaaatgtacaacaaagac----------------taagaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 373918 57 - 1517660 aatagcttACTGAACAA-----C---TTTTTACAC-AAACCCAAAATGTACAACaaagac----------------tgagaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474103 58 + 6513552 aatagcttACTGAACAA-----C---TTTTTACACAAAACCCAAAATGTACAACAAAGAC----------------TGAGAA i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11220144 63 - 20685099 aagagttgaatgaAGTAGTACTT---TTTTTGCACAAAATCCAAAAAGCGCAGCTAAGAA----------------TAATAA i otoGar3.GL873546 C 0 I 2 s canFam3.chr1 112290828 61 - 122678785 AATAGATTAGTAAAGTA-----CTTttttttatacaaaacatggaaagtataaaaaggaa----------------tgatca i canFam3.chr1 I 3 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470395 889 - 2150887 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=1207403.000000 s hg38.chr18_GL383571v1_alt 111719 208 + 198278 attctgctgaactgaaattaagaatttaatatttacgaaatgttagcataaaaagtatgaaaagactaacta-----------ctgttattttcaatccttaaactgacaaaagattcatatataaaatatatgaagaacattcatacatcaataataatcagacaaacaagggaatgtaagaattggccaaagtcttaaaagg--aggttttgacaaaat s panTro5.chr18 65021730 208 + 78221452 attctgctgaactgaaattaggaatttaatatttacgaaatgttagcataaaaagtatgaaaagactaacta-----------ctgttattttcaatccttaaactgacaaaagattcatatataaaatatatgaagaacattcatacatcaataataatcagacaaacaagggaatgtaagaattggccaaagtcttaaaagg--agcttttgacaaaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64140833 208 + 77229886 attctgctgaactgaaattaggaatttaatatttacgaaatgttagcataaaaagtatgaaaagactaacta-----------ctgttattttcaatccttaaactgacaaaagattcatatataaaatatatgaagaacattcatacatcaataataatcagacaaacaagggaatgtaagaattggccaaagtcttaaaagg--agcttttgacagaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360351 208 + 17472758 attctgctgaactgaaattaggaatttaatatttatgaaatgttagcataaaaagtatgaaaagactaacta-----------ctgttattttcaatccttaaactgacaaaagattcatatataaaatatatgaagaacattcatacatcaataataatcagacaaacaagggaatgtaagaattggccaaagtcttaaaagg--agcttttgacaaaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400493 209 - 152096393 attcagcttaactgaaattaagaatttaatatttatgaaatgttagcataaaaagtatgaaaagactaacta-----------ctgttattttcaatccttaaactgacaaaagattcatatataaaatatatgaagaacattcatacatcaataataatcaga-aaacaagggaatgtaagaattggccaaagtcttaaaaggacagcatttaacaaaat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349666 201 + 70235451 attcagctgaactgaaattaagaatttaatatttgtgaaatgttagcataaaaagtatgaaaagtctaacta-----------cggttattttcaatccttaaactgacaaaagattcatatataaaat-tat------tattcatacatcaataataatcagacaaacaagggaatgtaagaactggccaaagtcttaaaagg--aacttttgacaaaat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041061 201 - 75711847 attcagctgaactgaaattaagaatttaatatttgtgaaatgttagcataaaaagtatgaaaagtctaacta-----------cggttattttcaatccttaaactgacaaaagattcatatataaaat-tat------tattcatacatcaataataatcagacaaacaagggaatgtaagaactggccaaagtcttaaaagg--aacttttgacaaaat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13593816 201 - 18804593 ATTCAGCTGAACTGAAATTAAGAATTTAATATTTGTGAAATGTTAGCATAAAAAGTATGAAAAGTCTAACTA-----------CGGTtattttcaatccttaaactgacaaaagattcatatataaaat-tat------tattcatacatcaataataatcagacaaacaagggaatataagaactggccaaagtcttaaaagg--aacttttgacaaaat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210562 201 + 18905526 ATTCAGCTGAACTGAAATTAAGAATTTAATATTTGTGAAATGTTAGCATAAAAAGTATGAAAAGTCTAACTA-----------CGGTtattttcaatccttaaactgacaaaagattcatatataaaat-tat------tattcatacatcaataataatcagacaaacaagggaatgtaagaactggccaaagtcttaaaagg--aacttttgacaaaat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040359 201 - 72318688 attcagctgaactgaaattaagaatttaatatttatgaaatgttagtataaaaagtatgaaaagtctaacta-----------ctgttattttcaatctttaaactgacaagagattcatatataaaat-tat------tattcatacatcaataataatcagacaaacaagggaaagtaagaactggccaaagtcttaaaagg--aacttttgacaaaat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 373975 201 - 1517660 attcagctgaactgaaattaagaatttaatatttgtgaaatgttagcataaaaagtatgaaaagtctaacta-----------cggttattttcaatccttaaactgacaaaagattcatatataaaat-tat------tattcatacatcaataataatcagacaaacaagggaatgtaagaactggccaaagtcttaaaagg--aacttttgacaaaat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474161 200 + 6513552 ATTCAGCTGAACTTAAATTAAGAA-TTAATATTTATAAAATGTTAGCATAAAAAGTATGAAAAGTCCAACTA-----------CTGTTATTTTAAATCCTTAAACTGACAAAAGATTCATATATAAAAT-TGT------TATTCATACATCAATAATAATCAGACAAACAAGGGAATGTAAGAATTGGCCAAAGTCTTAAAAGG--AACTTTTGACAAAAT i colAng1.NW_012115433v1 C 0 I 126 s canFam3.chr1 112290889 206 - 122678785 agtaaactgtactgaaattcaaaattttgtgtttatgaaatatcaccataaatagtatgaaaacactagacaaaaactcagagaagttatttgtaatccttaaactgacacgaggttcatatacaagatatataaggcactttcatacctcaatagtaataagacaa------------caaaattgtccattgtcttaaagag---gttcttcacaaaag i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220207 2 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=40507.000000 s hg38.chr18_GL383571v1_alt 111927 8 + 198278 tgtaaacc s panTro5.chr18 65021938 8 + 78221452 tgtaaacc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141041 8 + 77229886 tgtaaacc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360559 8 + 17472758 tgtaaacc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400702 8 - 152096393 agtaaacc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349867 8 + 70235451 agtaaacc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041262 8 - 75711847 agtaaacc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594017 8 - 18804593 agtaaacc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210763 8 + 18905526 agtaaacc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040560 8 - 72318688 agtaaacc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374176 8 - 1517660 agtaaacc i manLeu1.NW_012106698v1 C 0 C 0 s canFam3.chr1 112291095 8 - 122678785 actaaacc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220207 2 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I e colAng1.NW_012115433v1 3474361 126 + 6513552 I a score=2327947.000000 s hg38.chr18_GL383571v1_alt 111935 390 + 198278 caaacaaccta--aatatgtga----aaagacacttaaacatcaccatctagagaaac---------gaaattaaatacacaatgaaatgccttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaaacactataaagaaatggaacatggcattttct------catg---tattccttgtgagactataaattgcagcatgcaatttgggaaaacagtttggtattagttggcacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtatatgtcctagagaaactcttatcaagtatactgggaaacatgttaaataacagtaataa-agcatcaataccaacaaaaccataaataacACTTGT-----GCTTCTCCATGTAGAAG s panTro5.chr18 65021946 389 + 78221452 caaacaaccca--aatatgtga----aaagacacttaaacatcaccatctagagaaac---------aaaattaagtacacaatgaaatgccttttaaaccc-tttctaataccagtttaat-------aaaatgtctgataatagcaaacattataaagaaatggaacatggcattttct------catg---tattccttgtgagactataaattgcagcacgcaatttgggaaaacagtttggtattagttggtactgttcaacatgtttgcatattctaaagtccaacctattacaca-------------cctatgtatatgtcctagagaaactct-atcaagtatactgggagacatgttaaataacagtaataa-agcatcaataccaacaaaaccataaataacACTTGT-----GCTTCTCCACGTAGAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141049 390 + 77229886 caaacaaccta--aatatgtga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacaatgaaatgccttttaaacccttttctaataccagtctaat-------aaaatatgtgataatagcaaacattataaagaaatggaacatggcattttct------catg---tattccttgtgagactataaattgcagcacgcaatttgggaaaacagtttggtattagttggcacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtatatgtcctagagaaactct-accaagtatactgggagacatgttaaataacagtaataa-agcatcaataccaacaaaaccataaataacACTTGT-----GCTTCTCCACGTAGAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360567 388 + 17472758 caaacaaccta--aatatgtga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacaatgaaatgccttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaaacattataaagaaatggaacatggcattttct------catg---tattccttgtgagactataaattgcagcacgcagtttgggaaaacagtttggtattagttggtacagttgaatatatttgcatattctaaagtccaacctattacaca-------------cctatgtatatgtcctagagaaac-ct-atcaagtatactgggagacatgtTAAATAACAGTAATAA-AGCATCAATACCAACAAAACCATAAATAACACTTGT-----GCTTCTCCATGTAGAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139400710 397 - 152096393 caaacaaccta--aatatgtga----aaagacacttaaacatcaccatctagagaaacaatgcaatgaaaattaaatacgcaatgaaatgccttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattataaagaaatggaacatggcattttct------catg---tattccttgtgagactataagttgcagcacgcaatttgggaaaacagtttggtatcatttggtactgttgaatatgtttgcatattctaaagtccaatctattacgca-------------cctatgtatatgtcctagagaaactct-atcaagtatattgggagacaagttaaataacagtaataa-agcatcaataccaacaaaaccataaataacAC-TGT-----GCTTCTCCATGTAGAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57349875 388 + 70235451 caaacaaccta--aatatatga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagcaaaatgctttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattataaagaaatggaacatggcattttgt------catg---tattccttgtaaaactataaattgcagcacgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtataagtgctagagaaactct-atcaagtatac-agtagacacgtTAAATAACAGTAATAA-AGCATCAATTTCAACAAAACCATAAATAACACTTGT-----GCTTCTCCATGTAGAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041270 388 - 75711847 caaacaaccta--aatatatga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagcaaaatgctttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattataaagaaatggaacatggcattttct------catg---tattccttgtaaaactataaattgcagcacgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtataagtgctagagaaactct-atcaagtatac-agtagacacgtTAAATAACAGTAATAA-AGCATCAATTTCAACAAAACCATAAATAACACTTGT-----GCTTCTCCATGTAGAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594025 388 - 18804593 caaacaaccta--aatatatga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagcaaaatgctttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattataaagaaatggaacatggcattttct------catg---tattccttgtaaaactataaattgtagcacgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtataagtgctagagaaactct-atcaagtatac-agtagacacgttaaataatagtaataa-agcatCAATTTCAACAAAACCATAAATAACACTTGT-----GCTTCTCCATGTAGAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13210771 388 + 18905526 caaacaaccta--aatatatga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagcaaaacgctttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattacaaagaaatggaacatggcattttct------catg---tattccttgtgagactataaattgcagcacgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtataagtcctagagaaactct-atcaagtatac-agtagacacgtTAAATAACAGTAATAA-AGCATCAATTTCAACAAAACCATAAATAACACTTGT-----GCTTCTCCATGTAGAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040568 388 - 72318688 caaacaaccta--agtatgtga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagtgaaatgccttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattataaagaaatggaacatggcattttct------catg---tattccttgtgagactataaattgcagcatgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtataagtcctagagaaactct-atcaagtatac-ggtagacatgttaaataacggtaataa-agcatcaataccaacaaaaccataaataacACTTGT-----GCTTCTCCATGTAGAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374184 388 - 1517660 caaacaaccta--aatatatga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagcaaaatgctttttaaaccc-tttctaataccagtctaat-------aaaatatctgataatagcaagcattacaaagaaatggaacatggcattttct------catg---tattccttgtaagactataaattgcagcacgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacaca-------------cctatgtataagtcctagagaaactct-atcaagtatac-agtagacacgtTAAATAACAGTAATAA-AGCATCAATTTCAACAAAACCATAAATAACACTTGT-----GCTTCTCCATGTAGAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474487 398 + 6513552 caaacaaccta--aatatgtga----aaagacacttaaacatcaccatctagagaaac---------aaaattaaatacacagtgaaatgccttttaaacgc-tttctaataccagtctaat-------aaaatacc---taatggcaagcattataaagaaatggaacatggcattttct------catg---tattccttgtaagactataaattgcagcatgcaatttgggaaaacagtttggtattcgttggtacagttgaatatgtttgcatattctaaagtccaacctattacacacctatgtataagccctatgtataagtcctagagaaactct-atcaagtgtac-ggtagacatgttaaataacagtaataa-agcatcaatatcaacaaaaccataaataacACTTGT-----GCTTCTCCATGTAGAAG i colAng1.NW_012115433v1 I 126 C 0 s canFam3.chr1 112291103 399 - 122678785 cagacaacccatgaacacatgaaaggaaagatggttaaatatc-tcatcaggaaagtc---------caaattaaacacataatgagattaattcaatattc-tt--------cagtttggcaaatacaaaaaagtctagcaatatcaggtattgtgaggaaatggaacaagacatgatctttaagacatactttgttgctgatgagaatacaaattactacatgtactttggataaacagtcttgtattttctggtatagttgaatatgttta-atgtcctacaatccag-atattgcatg-------------cctatatatatgcccttga-aaattcc-atacagtccacagggaaacatgtTAAATAATAGTAATAATAAGATCAACAACGACAAAATTGCAAGTAATTCTTGTATAAGGCTT------ACAGAAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220207 2 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I e saiBol1.JH378121 19430521 1219 - 31320352 I a score=69771.000000 s hg38.chr18_GL383571v1_alt 112325 9 + 198278 TTAATTTTA s panTro5.chr18 65022335 9 + 78221452 TTAATTTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141439 9 + 77229886 TTAATTTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360955 9 + 17472758 TTAATTTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401107 9 - 152096393 TTAATTTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350263 9 + 70235451 TTAATTTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041658 9 - 75711847 TTAATTTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594413 9 - 18804593 TTAATTTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211159 9 + 18905526 TTAATTTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040956 9 - 72318688 TTAATTTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374572 9 - 1517660 TTAATTTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474885 9 + 6513552 TTAATTTTA i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19431740 9 - 31320352 tcaatttTG i saiBol1.JH378121 I 1219 I 1 s canFam3.chr1 112291502 9 - 122678785 CTAATTTTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e calJac3.chr13 105238280 1 + 117903854 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220207 2 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I a score=47281.000000 s hg38.chr18_GL383571v1_alt 112334 8 + 198278 AGTGTATC s panTro5.chr18 65022344 8 + 78221452 AGTGTATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141448 8 + 77229886 AGTGTATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360964 8 + 17472758 AGTGTATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401116 8 - 152096393 AGTGTATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350272 8 + 70235451 AGTGTATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041667 8 - 75711847 AGTGTATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594422 8 - 18804593 AGTGTATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211168 8 + 18905526 AGTGTATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040965 8 - 72318688 AGTGTATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374581 8 - 1517660 AGTGTATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474894 8 + 6513552 AGTGTATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105238281 6 + 117903854 GGTGTT-- i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19431750 6 - 31320352 GGTGTT-- i saiBol1.JH378121 I 1 C 0 s canFam3.chr1 112291511 8 - 122678785 AGGGCATT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220207 2 - 20685099 I e aotNan1.NW_018502140v1 3578965 7 - 14941987 I e cebCap1.NW_016107689v1 1626690 110 + 2203405 I a score=565320.000000 s hg38.chr18_GL383571v1_alt 112342 48 + 198278 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT s panTro5.chr18 65022352 48 + 78221452 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141456 48 + 77229886 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5360972 48 + 17472758 ACAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401124 48 - 152096393 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350280 48 + 70235451 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041675 48 - 75711847 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594430 48 - 18804593 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211176 48 + 18905526 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60040973 48 - 72318688 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374589 48 - 1517660 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474902 48 + 6513552 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105238287 48 + 117903854 ATAAAATTCAATTAGTTTTCAAAATAATCTTGTGAAATAAGAAATGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19431756 47 - 31320352 ATAAAATTCAATTAGTCTTCAAAA-AATCTTATGAAATAGGAAATGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1626800 48 + 2203405 ATAAAATTCAATTAGTCTTCAAAATAATCTTATGAAATAGGAAATGAT i cebCap1.NW_016107689v1 I 110 C 0 s aotNan1.NW_018502140v1 3578972 48 - 14941987 ATAAAATTCAATTAGTCTTCAAAATAACCTTATGAAATAGGAAATGAT i aotNan1.NW_018502140v1 I 7 C 0 s canFam3.chr1 112291519 46 - 122678785 ATAAAAGTCA--CAGTCCTCAAAGTAATCTTATGAAATAGGAAGTGAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220207 2 - 20685099 I a score=395693.000000 s hg38.chr18_GL383571v1_alt 112390 34 + 198278 ATATGTACCATTATTAATAAGCACACATGCATAG s panTro5.chr18 65022400 34 + 78221452 ATATTTACCATTATTAATAAGGACACATGCATAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141504 34 + 77229886 ATATTTACCATTATTAATAAGGACACATGCATAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5361020 34 + 17472758 ATATTTACCATTATTAATAAGCACACATGCATAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401172 34 - 152096393 ATATTTACCATTATTAATAAGCACACATGCATAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350328 34 + 70235451 ATATTTACCACTATTAATAAGCACATATGCATAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041723 34 - 75711847 ATATTTACCATTATTAATAAGCACATATGCATAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594478 34 - 18804593 ATATTTACCATTATTAATAAGCACATATGCATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211224 34 + 18905526 ATATTTACCATTATTAATAAGCACATATGCATAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60041021 34 - 72318688 ATATTTACCATTATTAATAAGCACACATGCATAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374637 34 - 1517660 ATATTTACCATTATTAATAAGCACATATGCATAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474950 34 + 6513552 ATATTTACCATTATTAATAAGCACACATGCATAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105238335 34 + 117903854 ATATTTATCATTATTAATAGGCACACATGCACGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19431803 34 - 31320352 ATATTTATCATTATTAATAAGCACACATGTACAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1626848 34 + 2203405 ATATTTATCATTATTAATAAGCACACATGTATAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3579020 34 - 14941987 ATATTTACCATTATTAATAAGCACACATGCACAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11220209 34 - 20685099 ATATTTCCCATTATTAATGGGCTTACATGCACAG i otoGar3.GL873546 I 2 I 4 s canFam3.chr1 112291565 30 - 122678785 ATATTCCTCATTATTAATAAAAatgcatat---- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=331193.000000 s hg38.chr18_GL383571v1_alt 112424 33 + 198278 CT--GAAAAAATGCA-AAAATAAAAT-----AAA-GTAAAAT s panTro5.chr18 65022434 33 + 78221452 CT--GAAAAAATGCA-AAAATAAAAT-----AAA-GTAAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141538 33 + 77229886 CT--GAAAAAATGCA-AAAATAAAAT-----AAA-GTAAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5361054 33 + 17472758 CT--GAAAAAATGCA-AAAATAAAAT-----AAA-GTAAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401206 34 - 152096393 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350362 34 + 70235451 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041757 34 - 75711847 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594512 34 - 18804593 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211258 34 + 18905526 CT--GAAAAAATGCA-AAAATAAAATA----GAA-GTAAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60041055 34 - 72318688 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374671 34 - 1517660 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3474984 34 + 6513552 CT--GAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105238369 36 + 117903854 CTAAAAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19431837 35 - 31320352 CT--AAAAAAATGCA-AAAAAAAAAAA----AAAGGTACAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1626882 35 + 2203405 CT-TAAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3579054 35 - 14941987 CT-AAAAAAAATGCA-AAAATAAAATA----AAA-GTAAAAT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112291595 39 - 122678785 gt--ggaaaaatggagaaaataaaataagataaa-gtaaaat i canFam3.chr1 C 0 I 1289 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11220243 4 - 20685099 I a score=2841799.000000 s hg38.chr18_GL383571v1_alt 112457 282 + 198278 TTGggctgggcacagtggctcacgcctgaaatcccaacattttgggggactaag--gcaggaggatagcttgaggctaggagtttgagatcagcctgggtcccttagggagat--------------aaattaaaaaaaattatccggccatggtggctcatacctgtagccacagctactcagggggctgaggtgggaggatcgcttgagcctggaaggttaaggctgcagtgagccatgatcacaccactgcactcaagtctgggtgacagagagagaccctgtctc-aaaaaaata s panTro5.chr18 65022467 281 + 78221452 TTGggctgggcacagtggctcacacctgaaatcccaacattttgggggactaag--gcaggaggatagcttgaggctaggagtttgagatcagcctgggtcccttagggagat--------------aaattaaaaaaa-ttatccggccatcgtggctcatacctgtagccacagctactcagggggctgaggtgggaggatcgcttgagcctggaaggttaaggctgcagtgagccatgatcacaccactgcactcaagtctgggtgacagagagagaccctgtctc-aaaaaaata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141571 282 + 77229886 TTGggctgggcacagtggctcacgcctgaaatcccaacattttgggggactaag--gcaggaggatagcttgaggctaggagtttgagatcagcctgggtcccttagggagat--------------aaattaaaaaaa-ttatccggccatcgtggctcatacctgtagccacagctactcagggggctgaggtgggaggatcgcttgagcctggaaggttaaggctgcagtgagccatgatcacaccactgcactcaagtctgggtgacagagagagaccctgtctcaaaaaaaata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5361087 281 + 17472758 TTGggctgggcacagtggctcacgcctgaaatcccaacattttgggggactaag--gcaggaggatagcttgaggctaggagtttgagatcagcctgggtcacttagggagat--------------aaattaaaaaaa-ttatccggccatggtggctcatacctgtagccacagctactcagggggctgaggtgggaggatcgcttgagcctggaaggttaaggctgcagtgagccatgatcacaccactgcactcaagtctgggtgacagagagagaccctgtctc-aaaaaaata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401240 294 - 152096393 TT-ggccgggcacagtggctcatgcctgtaatcccaacactttgggaaactaag--gcaggaggatagcttgaggctaggagtttgagaccagcctggttcacgtagggagatctaatttctacaaacaattaaaaaaa-ttattcggccatggtggcttatacctgtagcaacagctgctcagggggccgaggtgggaggatcgcttgagcttgcaaggttaaggcagcagtgagctgtgatcacaccactgcactcaagcctgggtgacagagagagatcctgtctc-aaataaata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350396 295 + 70235451 TTGggccggacatagcggctcacgcctgtaatcccaacactttgggaggctaag--gcaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttagggagatatcatcactataagcaattaaaaaaa-ttatccgaccatggtgactcatacctgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggttaaggctgcagtgagccatgatcacactgctgcactccagcctgggtgacagagagagaccctgtctc-aaaaaaata i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63041791 295 - 75711847 TTGggccggacatagcggctcacgcctgtaatcccaacactttgggaggctaag--gcaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttagggagatatcatcactataagcaattaaaaaaa-ttatccgaccatggtgactcatacctgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggttaaggctgcagtgagccatgatcacactgctgcactccagcctgggtgacagagagagaccctgtctc-aaaaaaata i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594546 295 - 18804593 TTGggccggacatagcggctcacgcctgtaatcccaacactttgggaggctaag--gcaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttagggagatatcatcactataagcaattaaaaaaa-ttatccgaccatggtgactcatacctgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggttaaggctgcagtgagccatgatcacactgctgcactccagcctgggtgacagagagagactctgtctc-aaaaaaata i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211292 295 + 18905526 TTGggccggacatagcggctcacgcctgtaatcccaacactttgggaggctaag--gcaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttagggagatatcatcactacaagcaattaaaaaaa-ttatccggccatggtgactcatacctgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggttaaggctgcagtgagccatgatcacactgctgcactccagcctgggtgacagagagagaccctgtctc-aaaaaaata i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60041089 295 - 72318688 TTGggctgggcacaggggctcacgcctgtaatcccaacactttgggaggctaag--gcaggaggatagcttgaggctaggagtttgaggccagcctgggtcacttagggagataccatcactacaaacaactaaaaaaa-ttatctggccatggtgactcatacctgtagccacagctactcaggggtctgaggtgggaggatcacttgagcctggaaggttaaggctgcagtgagccgtgatcacactgctgcactccagcctgggtgacagagagagaccctgtctc-aaaaaaata i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 374705 295 - 1517660 TTGggccggacatagcggctcacgcctgtaatcccaacactttgggaggctaag--gcaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttagggagatatcatcactacaagcaattaaaaaaa-ttatccggccatggtgactcatacctgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggttaaggctgcagtgagccatgatcacactgctgcactccagcctgggtgacagagagagaccctgtctc-aaaaaaata i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3475018 295 + 6513552 TTGggctgggcacagcggctcacgcctgtaatcccaacattttgagaggctaag--gcaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttacggagatagcatcactacaaacaattaaaaaaa-ttatccggccatggtgactcatacctgtagccacagctactcagggggctggggtgggaggatcacttgagcctggaaggttaaggctgcagtgagctgtgatcacactgctgcactctagcctgggtgacagagagagaccctgtctc-aaaaaaata i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105238405 297 + 117903854 TTGggccaggcacagtggttcatgcctgtaatcccaaaactttgggaggctaagaaacagaagggtagcttgaggctaggagtttgagaccagcctgggtcacttcgggatatcccatctctacaaaaaattaaaaaaa-ttattcagccatggtggctcatacatgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggtcaaggctgcagtgagccgtgatcacaccactgcactccagcctgggtgacagagcaggaccctgtctc-aacaaaata i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19431872 294 - 31320352 TTGggccaggcacagtggctcatgcctgtaatcccaacactttgggaggctaag--acaggaggatagcttgaggctaggagtttgagaccagcctgggtcactttgggagagcccatctctacaaacaattaaaaaaa-ttattcggccatggtggttcatacatgtagccacagctactcagggggctgaggtgggaggatcacttgagcctggaaggtcaaggctgcagtgagccaaga-cacaccactgcactccagcctgggtgacagagcaggaccctatctc-aacaaaata i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1626917 294 + 2203405 TTGggccaggcacagtggctcatgcctgtaatcccaatac-ttgggaggctaag--acaggaggatagcttgaggctaggtgtttgagaccggcctgggtcacttcaggagatcttatctctataaacaattaaaaaaa-tcattcagccatggtggcttatacatgtagccacagctactcagggggctgaagtgggaggatcacttaagcctagaaggtcaaggctgcagtgagccatgatcacaccactgcactccagcctgggtgacagagcaggaccccgtctc-aacaaaata i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3579089 295 - 14941987 TTGggccagacacagtggctcatgcctgtaatcccaacactttgggaggctaag--acaggaggatagcttgaggctaggagtttgagaccagcctgggtcacttcgggagatcccatctctacaaacaattaaaaaaa-ttattcggccatggtggctcatacacgtaaccacagctactcaggggactgaggtgggaggatcacttgagcctgaaaggtcaaggctgcagtgagtcgtgatcacatcactgcactccagcctgggtgacagagcaggaccctgtctc-aacacaata i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I e otoGar3.GL873546 11220243 4 - 20685099 I a score=7349327.000000 s hg38.chr18_GL383571v1_alt 112739 767 + 198278 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGAGTGCAGAGGAGTAGTGGTGTAATGGGGCTTCTAACATGCTGCATTGCTCCATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACATTTAA----AACTGTGTATTATATTCATTTTATACATGTTCAACCAATAAATTCACTTCTTTCCATATTCTCAGGGACACACAGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACCTAAGTAATTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCAGACAGCACTGCCAACAGAAAATCAggaatcagaaatgcttcatgtagaagactgcagttactctgtgactctggggataattaggaaatctccaggtggt-aaaagaggagaaagagcactcaggcaTCCTTAA----------------AAAAAAAAAaaacaa-----------tcaagaagaa----caagcaagcaagcaaCCTGGAAATACCTGGTACAACTTAAAGGTAGAATGGGATAAATTGAAGTAAATTAGGACATTAGAAATATGACTACATTTTTAACTTTGGCTACAGTCT-AAAGTCAATCACCTtctc--------------------------------tctctttctgtctc------------------------------tctctgtctccctatttctatctctctccctct------cACACACAGCAATAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA s panTro5.chr18 65022748 775 + 78221452 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGCATGAGAGTGCAGAGGAGTAGTGGTGTAATGGGGCTTCTAGCATGCTGCATTGCTCCATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACATTTAA----AACTGTGTATTATATTCATTTTATACATGTTGAACCAATAAATTCACTTATTTCCATATTCTCAGGGACACACGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACGTAAGTAATTATCGCATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCAGACAGCACTGCCAACAGAAAATCAggaatcagaaatgcttcatgtagaagactgcagttactctgtgactctggggataattaggaaatctccaggtggt-aaaagaggagaaagagcactcaggcaTCCTTaa----------------aaaaaaaaaaaaaaaaaaa-------tcaagaagaaaaagcaagcaagcaagcaaCCTGGAAATACCTGGTACAACTTAAAGGTAGAATGGGATAAATTGAAGTAAATTAGGACATTAGAAATATGACTACATTTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctctttctgtctc------------------------------tctctgtctccctatttctatctctctccctct------cACACACAGCAATAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64141853 770 + 77229886 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGAGTGCAGAGGAGTAGTGG-GGAATGGGGCTTCTAGCATGCTGCATTGCTCCATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACATTTAA----AACTGTGTATTATATTCATTTTATACATGTTGAACCAATAAATTCACTTCTTTCCATATTCTCAGGGACACACGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACGTAAGTAATTATCGCATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCAGACAGCACTGCCAACAGAAAATCAggagtcagaaatgcttcatgtagaagactgcagttactctgtgactctggggataattaggaaatctccaggtggtaaaaagaggagaaagagcactcaggcaTACCTTA----------------AAAAAAAAAAAAaa------------tcaagaagcaaaagcaagcaagcaagcaaCCTGGAAATACCTGGTACAACTTAAAGGTAGAATGGGATAAATTGAAGTAAATTAGGACATTAGAAATATGACTACATTTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctctttctgtctc------------------------------tctctgtctccctatttctatctctctccctct------cACACACAGCAATAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5361368 770 + 17472758 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGATATGAGAGTGCAGAGGAGTAGTGGTGTAATGGAGCTTCTAACATGCTGCATTGCTCCATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACATTTAA----AACTGTGTATTATATTCATTTTATACATGTTGAACCAATAAATTCACTTCTTTGCATATTCTCAGGGACACACGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTATGTAAGTAATTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAACGGAGAGGGCAGACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgtagaagactgcacttactctgtgactctggggataattaggaaatctccaggtggt-aaaagaggagaaagagcactcaggcaTCCTTaa----------------aaaaaaaaaaaaaaaaa---------tcaagaagaaaaagcaagcaagcaagcaaCCTGGAAATACCTGGTACAACTTAAAGGTAGAATGGGATAAATTGAAGTAAATTAGGACATTAGAAATATGACTACATTTTTAAC--TGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctctttctgtctc------------------------------tctctgtctccctatttctatctctctccctct------cACACACA-CAATAGAGTGATTTTGACAGCAAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139401534 755 - 152096393 aaaat------aaaaacaaaaaaTAGAAGGAAAGTTTTACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGTGCGCAGAGGAGTAGTGGTGTAATGGGGCTTCTAACATGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACA-TTAA----AAATGTGTATTATATTCATTTTATACACGTTGAACCAATAAATTTACTTCTTTCCATATTCTCAGGGACACACGGAGACACCTTC----GGCTGAAAGGCAGGCAT-AGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTTTTTTCACAGCACAATGGAGAGGGCAGACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactctggggataattaggaaatctccaggtggt-aaaagaggagaaagagcactcaggc-TCCTTaa----------------aaaaaaaaaaaaaa------------tcaagaagaaaaagcaagcaagcaagcaaCCTGGAAATACCTGGTACAATTTAAAGGTAGAATGGGATAAATTGAAGTAAATTAGGACACTAGAAATACGACTATATTTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTTCTC--------------------------------TT--------TCTC------------------------------TCTCTGTCTCCCTATT----TCTCTCTGCCTCT------CACACACAGCAATAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTGTGGTTCAATAATTCATATGGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57350691 780 + 70235451 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGGGCGCAGGGGAGTCGTGGTGTAATGGGGTTTCTAATGTGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTA--------TTCACGTTGAA----AAATGTGTAATATATTCATTTTATACATGTTGAACCAATAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCGAACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactccagggataattaggaaatctccaggtggt-aaaagaggggaaaaagcactcaggcaTCTTTAa---------aataaataaataaataaataaataaataaaAATTCAAGAAGAAAATGCAGGCAAGCAAGCAACCTGGAAATAGTTGGTACAAC-TAAAGGTAGAATGGGATAAATGTAAGTAAATTAGGACA-TAGAAATATGACTATATGTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctct-----tttc------------------------------tctctgtctctctctctctgtctctctccctttcACACACACACACAGCAATAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63042086 782 - 75711847 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGGGCGCAGGGGAGTCGTGGTGTAATGGGGTTTCTAACGTGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTA--------TTCACATTGAA----AAATGTGTAATATATTCATTTTATACATGTTGAACCAATAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCGAACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactccagggataattaggaaatctccaggtggt-aaaagaggggaaaaagcactcaggcaTCTTTAA--------aaataaataaataaataaataaataaataaaAATTCAAGAAGAAAATGCAGGCAAGCAAGCAACCTGGAAATAGTTGGTACAACTTAAAGGTAGAATGGGATAAATTTAAGTAAATTAGGACATTAGAAATATGACTATATGTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctc------tttc------------------------------tctctgtctctctctttctgtctctctccctttcACACACACACACAGCAACAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13594841 774 - 18804593 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGGGCGCAGGGGAGTCGTGGTGTAATGGGGTTTCTAACGTGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTA--------TTCACATTGAA----AAATGTGTAATATATTCATTTTATACATGTTGAACCAATAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCGAACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactccagggataattaggaaatctccaggtggt-aaaagaggggaaaaagcactcaggcaTCTTTAA----------------aaataaataaataaataaataaaGATTCAAGAAGAAAATGCAGGCAAGCAAGCAACCTGGAAATAGTTGGTACAACTTAAAGGTAGAATGGGATAAATTTAAGTAAATTAGGACATTAGAAATATGACTATATGTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctc------tttc------------------------------tctctgtctctctctctctgtctctctccctttcACACACACACACAGCAACAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13211587 766 + 18905526 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGGGTGCAGAGGAGTCGTGGTGTAATGGGGTTTCTAACGTGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTA--------TTCACATTGAA----AAATGTGTAATATATTCATTTTATACATGTTGAACCAATAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCGAACAGCTCTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactccagggataattaggaaatctccaggtggt-aaaagaggggaaaaagcactcaggcaTCTTTAA----------------aaataaataaacaaataaataaaaattcaagaagaaaatGCAGGCAAGCAAGCAACCTGGAAATAGTTGGTACAACTTAAAGGTAGAATGGGATAAATTTAAGTAAATTAGGACATTAGAAATATGACTATATGTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctc------tttc------------------------------tctctgtctccctctttctgtctctctTCCTTT--CACACACACACAGCAATAGAGTGATTTTGACAGCGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCA------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60041384 791 - 72318688 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCCGGTATGAGGGTGCAGAGGAGTCGTGGTGTAATGGGGTTTCTAACGTGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACATTTAA----AAATGTGTATTATATTCATTTTATACATGTTGAACCATTAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----AGCTGAAAGGCAGGCATAAGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCAGACAGCGCTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactctggggataattaggaaatctccaggtggt-aaaagaggggaaaaagcactcaggcaTCCTTAACaataaataaataaataaataaataaataaataaataaaAATTCAAGAAGAAAAT----GCAAGCAAACAACCTGGAAATAGTTGGTACAACTTAAAGGTAGAATGGGATAAATTTAAGTAAATTAGGACATTAGAAATATGACCATATGTTTAACTTTGGCTACAGTCT-AAAGTCAATCAACTtctc--------------------------------tctc------tttc------------------------------tctctgtctccctatttctctctctctcccttt--cACACACACACAGCAATAGAGTGATTTTGACAGTGAA-GAAATGGAATAGGAACATTTATGGTTCAATAATTCATATGGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 375000 772 - 1517660 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACACAAGTCAAGAT------AAGGGTTCCATCTTCATGGCTGGTATGAGGGTGCAGAGGAGTCGTGGTGTAATGGGGTTTCTAACGTGCTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTA--------TTCACATTGAA----AAATGTGTAATATATTCATTTTATACATGTTGAACCAATAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACATAAGTAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCGAACAGCGCTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgttactccagggataattaggaaatctccaggtggt-aaaagaggggaaaaagcactcaggcaTCTTTAA----------------aaataaataaataaataaataaaaattcaagaagaaaatGCAGGCAAGCAAGCAACCTGGAAATAGTTGGTACAACTCAAAGGTAGAATGGGATAAATTTAAGTAAATTAGGACATTAGAAATATGACTATATGTTTAACTTTGGCCACAGTCT-AAAGTCAATCAACTtctc--------------------------------tgtc------tttc------------------------------tctctgtctccctctttctgtctctctcccttt--cACACACAGACAGCAATAGAGTGATTTTGACAGTGAAGGAAATGGAATAGGAACATTTATGTTTCAATAATTCATATGGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3475313 770 + 6513552 aaaat------aaaaataaaaaaTAGAAGGAAAGTTTAACATAAGTCAAGAT------AAGAGTTCCATCTTCATGGCTGGTATGAGGGTGCAGAGGAGTCGTGGTGTAATGGGGTTTCTAACATACTGCATTGCTCTATTC------TATTCCTTATTCTGGGCAGCAAATACTTGTATTCACTATTTCACATTTAA----AAATGTGTATTATATTCATTTTATACATGTTGAACCAATAAATTTACTTCTTTGTATATTCTCAGGGACACATGGAGACACCTTC----GGCTGAAAGGCAGGCATAAGTTACATAA-CAAGTATCACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGAGGGCGGACAGCGCTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagttactctgtgactccggggataattaggaaatctccaggtggt-aaa--aggggaaaaagcactcaggcaTCCTTAA--------------------aaataaataaataaataaaaattcaagaagaaaat----GCAAGTAAGCAACCTGGAAATAGTTGGTACAACTTAAAGGTAGAATGGGATAAATTTAAGTAAATTAGGACATTAGAAATATGACTATATTTTTAACTTTGGCTACAGTCTAAAAGTCAATCAACTtctc--------------------------------tctc------tttc------------------------------tctctgtctccctatttctgtctctctcccttt--cACACACGCACAGCAATACAGTGATTTTGACAGTGAAGGAAATGGAATAGGAACATTTATGCTTCAATAATTCATATGGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105238702 819 + 117903854 aaaac------------aaaaaaTAGAAGGAAAATTTAACACAAGTCAAGAT------AAGGGTTCTAGCTTCATGGCTGGTATGGGAGTGCAGATGATTAGTAGTGCAATGGGGCTTCCAATGTGCTGCATTACTGTATTC------CATTTCTTATTCTGGGCAGAAAATACTTGTATTCACCATTTCACACTAAAA---AAATGTATATTATATTCATTTTGTACATGTAGAACAAATAAATTTA---CTTTCTATATTTTCAGGGACACAAGGAGACACCTTC----AGCTGAAAGG-AGGCATAAGTTACATAAG----TATTACATGCTGAGAAGGCATGTGCAATTTGTTTTCGCAGCACAATGGAGATGGCGGACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagtcactctggtactctgaggataattaggaaatctccaggtggt-aaaagaggggaaagagcactcaggcaTCCTTTT----------------ACAAAAACAT----------------TCAAGAAGAAAAAGCAAGTAAGCCAGCAATCTAGAAATACGAGGTACAACTTAAAGGTAGAATGAGATAAACTGAAGTAAATGAGGACATTAAAAATATGACTATATTTTTAATTTTGGCTACAGTCT-AAAGTCAATCAATTtccctctctctctctctctctctctctctctctctctctctttctctctctctctctctctctcgctctctctttctctctctctctctccctgtttttgtctctttcccttt--cACATACACACTGCAATAGAGTGATTTTGACAGTGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATACAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19432166 771 - 31320352 aaaacaaacaaacaaaaaaaaAATAGAAGGAAAATTTAACACAAGTCAAGAT------AAGGGTTCTATTTTCATGGCTGGTATGAGAGTGCAGATGATTAGTAGTGCAATGGGGCTTCCAACGTGCTATGTTACTCTATTC------CATTTCTTATTCTGGGCAGCAAATACTTGTATTCACCATTTCACACtaaaa-atatatatatattatattCATTTTGTATGTGCAAAACAAATAAATTTACTCCTCTCTATATTCTCAGGGACATAAGGAGACACCTTC----GGCTGAAAGG-AGGCATAAGTTACATAAG----TATTACATGCTGAGAAGGCATGTGGAATTTGTTTTCACAGCACAATGGAGGTGGCGGACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagtcattctggtactccgaggataattaggaaatctccaggtggt-aaaagaggggaaagaggactcagacaTCCTTTT----------------AAAAAAACAT----------------TCAAGAAGAAAAAGCAAGCAAGCCAGCAACCTAGAAATACGAGGTACAATTTAAAGGTAGCATGGGATAAACTGAAGTAAATGAGGATATTAGAAATATGACTATATTTTTAATTTTGGCTACAGTCA-AAAGTCAATCAATTTCCCG-------------------------------TCTCTTTCCCACTC----------------------------------TGTCTCCCTGCTTTTATCTCTTTCCCTTT--CACATACACACAGCAATAGAGTGATTTTGACAGTGAAGGAAATGGAATAGGAACATTTATGGTTCAATAATTCATACAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1627211 740 + 2203405 aaaac-----------aaaaaaaTAGAAGGAAAATTTAACACAAGTCAAGAT------AAGGGTTCTACCTTCATGGCTGGTATGAGAGTGCAGATGATTAGTAGTGCAATGGGGCTTCCAACATGCTGCATTACTCTACTC------CATTTCTTATTCTGGGCAGCAAATACTTGTATTCACCATTTCACACTAAA----AAATGTATATTATATTCATTTTGTTCGTGTAGAACAAATAAATTTACTGCTTTCTATATTCTCAGGGACACAAGGAGACACCTTC----GGCTGAAAGG-AGGCATAAG---------------TTACATGCTGAGAAGGCATGTGCAATTTGTTTTCACAGCACAATGGAGGTGGCGGACAGCACTGCCAAGAGAAAATCAggaatcagaaatgcatcatgcagaagattgtagtcactctggtactctgaggataattaggaaatctccaggtggt-aaaagaggggaaagagcaatcaggcaTGCTTTT----------------AAAAAAACAT----------------TGAAGAAGAAAAAGCAAGCAAGCCAGCAACCTAGAAATACGAGGTACAA-TTAAAGGTACAATGGGATAAACTGAAGTAAATGAGGACATTAGAAATAAGAC------ATTAATTTTGGCTACAGCCG-AAAGTCAATCAATTtccc--------------------------------tctctttctctctc------------------------------tctctgtctccctgcttttgtctctttcccttt--cACATACACA--GCAATAGAGTGATTTTGACAGTGAAGGAAATGGAATAGGAATATTTATGGTTCAATAATTCATACAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3579384 764 - 14941987 aaaac-----------aaaaaaaTAGAAGGAAAATTTAACACAAGTTAAGAT------AAGGGTTCTATCTTCATAGCTGGTATGAGAGTGCAGATGATTAGTAGTGCAATGGGGCTTCCAATGTGCTGCATTACTCTATTC------CATTTCTTATTCTGGGCAGCAAATACTTGTATTCACCATTTCACACTAAAAAAAATATGTATATTATATTCATTTTGTACATGTAGAACGAATAAATTTACTCCTTTCTATTTTCTCAGGGACACAAGGAGACACCTTC----AGCTGAAAGG-AGGCATAAGTTACATAAG----TATTACATGCTGAGAAGGCGTCTGCAATTTGTTTTCACAGCACAATGGAGATGGCGGACAGCACTGCTAAGAGAAAATCAggaatcagaaatgcttcatgcagaagattgcagtcactctggtactctgaggataattaggaaatctccaggtggt-aagagaggggaaagagtactcaggAATCCTTTT----------------AAAAAAACAT----------------TCAAGAAGAAAAAGCAAGCAAGCCAGCAACCTAGAAATATGAGGTACAACTTAAAGGTAGAATGGGATAAACTGAAGTAAATGAGGACATTAGAAATATGACTATATTTTTAATTTTGGCTACAGTCT-AAAGTCAATCAATTtctc--------------------------------tctctttctctcac------------------------------tctctgtctccctgtttttgtctctttcccttt--cACATACACACAGCAATAGAGTGATTTTGACAGTGAAGGAAATTGAATAGGAACATTTATGGTTCAATAATTCATGCAGA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11220247 706 - 20685099 AAAAT------GCAAAAATGAAATTAAAGGAAAATTTAACACAAGTCGAGATACGAGGAAGGGCTGTATTTTCAGTGTTGG---GTATGCGCCTGTGAGTAGTAGTGTAATAGGGTTTCCAATATACTAGATTATTCTATTCTATGAATATTTCTTATTTGTGGCAGTGAGTACTTCTATTCATT--TTTATATTATT----TTCTATATG-TATATTCATTTTATATTGGTTGAGCAAATAAATTCACTTCTTTCTATATTCTCAGGAATACATGGAGACATTGCTGGCGGGCTGCAAGGCAGGCATAAATCCGAGCAGCGAGTACTAAGTGCTGGGAAGGGAGGGACACTTTGTTCTAACAGCACAATGGAGAGGGCAA-------TGCGAAGAGAAAATCAGGAATCAGAAATGCTTCATGCACAAGACTGCAGTTCCTCCGGGATGCTGAGGATAATTAGGAAATCTCCAGGTGGT-AGAAGAGGTGAAAGTGCACTGGA-----CTTTT----------------AACAAAACGT----------------TCAAGAAGAAAAACCTAGCATGCAAGAA----GTAAATTCCACGTACAACCAAGAGAGGAAATG-GATACACTGAAGGAAATTAGGGATATCAGTATTTTTTTTTTTTTTTTACATAGTCTACAACCT-AAATTCAATC-------C--------------------------------CCCC------TCCA-----------------------------------------------------------------CACACAGACACAATGAGAGAGTGAATCTGACAGTCAGGAGAATGG-----------TAATGACTCAAGAATTCATAAGAA i otoGar3.GL873546 I 4 I 128 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=758395.000000 s hg38.chr18_GL383571v1_alt 113506 68 + 198278 AGGGCTTAAAATATGCAAGATGAATCAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC s panTro5.chr18 65023523 68 + 78221452 AGGGCTTAAAATATGCAAGATAAATCAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64142623 68 + 77229886 AGGGCTTAAAATATGCAAGATGAATCAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5362138 68 + 17472758 AGGGCTTAAAATATGCAAGATGAATCAAAAGAGATGCCAAAAGTTTCATGTTCACACTGTGTTTATTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139402289 68 - 152096393 AGGGCTTAAAATATGCAAGATGAATGAAAAGAGATGCCAAAAGTTTCACATTCACACTGTGTTTATTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57351471 68 + 70235451 AGGGCTTAAAATATGCAAGACGAATGAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63042868 68 - 75711847 AGGGCTTAAAATATGCAAGACAAATGAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13595615 68 - 18804593 AGGGCTTAAAATATGCAAGACGAATGAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13212353 62 + 18905526 ------TAAAATATGCAAGACGAATGAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60042175 68 - 72318688 AGGGCTTAAAATATGCAAGACGAATGAAAAGAGATGCCAAAAGTTTCACGTTCACACTGTGTTTATTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 375772 68 - 1517660 AGGGCTTAAAATATGCAAGACGAATGAAAAGAGATGCCAAAAGTTTCATGTTCACACTGTGCTTATTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3476083 68 + 6513552 AGGGCTTAAAATACGCAAGACAAATGAAAAGAGATGCCAAAAGTTTCACATTCACACTGTGTTTATTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105239521 68 + 117903854 AGGGTCTAAAATATGCAAGATGAATGAAAAGAGATGCCAAAATTTTCACGTTCACACTGTGTTTATTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19432937 68 - 31320352 AGGGCTTAAAATATGCAAGATGAATGAAAAGAGATGCCAAAATTTTCACATTCACACTGTGTTTATTC i saiBol1.JH378121 C 0 I 2 s cebCap1.NW_016107689v1 1627951 68 + 2203405 AGGGCTTAAAATATGCAAGATGAATAAAAAGAGATGCCAAAATTTTCACATTCACACTGTGTTTATTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3580148 68 - 14941987 AGGGCTTAAAATACGCAAGACGAATGAAAAGAGATGCCAAAATTTTCACGTTCACACTGTGTTTATTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11221081 67 - 20685099 AAGGCTTAGAATATGTCAGGTGAATGGAAAGAGATGCAGAAGGTGTTGTG-TCACGCTGCGTTTATTC i otoGar3.GL873546 I 128 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=21840.000000 s hg38.chr18_GL383571v1_alt 113574 2 + 198278 AA s panTro5.chr18 65023591 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64142691 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5362206 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139402357 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57351539 2 + 70235451 AA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63042936 2 - 75711847 AA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13595683 2 - 18804593 AA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13212415 2 + 18905526 AA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60042243 2 - 72318688 AA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 375840 2 - 1517660 AA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3476151 2 + 6513552 AA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105239589 2 + 117903854 AA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1628019 2 + 2203405 AA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3580216 2 - 14941987 AA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11221148 2 - 20685099 AA i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I e saiBol1.JH378121 19433005 2 - 31320352 I a score=517645.000000 s hg38.chr18_GL383571v1_alt 113576 48 + 198278 CAAACATACTTTT---AAAACAATTTTAGTGTGTCTTGAAGAAGGGGTGGG s panTro5.chr18 65023593 48 + 78221452 CAAACATACTTTT---AAAACAATTTTAGTGTGTCTTGAAGAAGGGGTGGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64142693 48 + 77229886 CAAACATACTTTT---AAAACAATTTTAGTGTGTCTTGAAGAAGGGGTGGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5362208 48 + 17472758 CAAACATACTTTT---AAAACAATTTTAGTGTGTCTTGAAGAAGGGGTGGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139402359 48 - 152096393 CAAACATACTTTT---AAAACAATTTCAGTGTGTCTTGAAGTAGGGGCGGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57351541 49 + 70235451 CAAACATACTTTC--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63042938 49 - 75711847 CAAACATACTTTC--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13595685 49 - 18804593 CAAACATACTTTC--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13212417 49 + 18905526 CAAACATACTTTC--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60042245 49 - 72318688 CAAACATACTTTT--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 375842 49 - 1517660 CAAACATACTTTC--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3476153 49 + 6513552 CAAACATACTTTT--AAAAACAATTTTAGTGTGTCTTGAAGTAGGGGTGGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105239591 48 + 117903854 CAAACATACTTTT---AAAACAATTTTGGTGTGTCTTGAAGtaggagtgga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433007 48 - 31320352 CAAACATACTTTT---AAAACAATTTTGGTGTATCTTGAAGTAGGGGTGGG i saiBol1.JH378121 I 2 C 0 s cebCap1.NW_016107689v1 1628021 48 + 2203405 CAAACATACTCTT---AAAACAATTTTGGTGTGTCTTGAAGTtggggtggg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3580218 48 - 14941987 CAAACATACTTTT---AAAACAATTTTGGTGTGTCTTGACGTAggggtggg i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11221150 50 - 20685099 -AAACATACTTTGGGGGAAAAAAATCTGGTGTGTCTTAAAGTAAGGGTGGG i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=1093743.000000 s hg38.chr18_GL383571v1_alt 113624 119 + 198278 TACTAGGGCAAACATCTTTGGCTTGCTAATCAAATATCTTTTCCTAATCCT-TTTCCCCTTGCCTACCTTC-TGAAGAAATAGAAATGTTAAATTTGCATATTTATGTACACTCTCAAAGC s panTro5.chr18 65023641 120 + 78221452 TACTAGGGCAAACATCTTTGGCTTGCTAATCAAATATCTTTTCCTAATCCT-TTTCCCCTTGCCTACCTCCCTGAAGAAATAGAAATGTTAAATTTGCATATTTATGTACACTCTCAAAGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64142741 120 + 77229886 TACTAGGGCAAACATCTTTGCCTTGCTAATCAAATATCTTTTCCTAATCCT-TTTCCCCTTGCCTACCTCCCTGAAGAAATAGAAATGTTAAATTTGCATATTTATGTACACTCTCAAAGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5362256 120 + 17472758 TACTAGGGCAAACATCTTTGCCTTGCTAATCAAATATCTTTTCCTAATCCT-TTTCCCCTTGCCTACCTCCCTGAAGAAATAGAAATGTTAAATTTGCATATTTATGTACACTCTCAAAGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139402407 119 - 152096393 TACTAGGGTAAACATCTTTGGCTTGCTAATCAAATATCTTTTCCTAATCC--TTTCCCCTTGCCTACATCCCTGAAGAAATAGAAATGTTAAATTTGCATATTTATGTACACTCTCAAAGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57351590 120 + 70235451 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGATATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAACAGAAATGTTAAATTCGCATATTTATGTACACTCTCAAAGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63042987 120 - 75711847 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGATATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAACAGAAATGTTAAATTCGCATATTTATGTACACTCTCAAAGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13595734 120 - 18804593 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGATATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAATAGAAATGTTAAATTCGCATATTTATGTACACTCTCAAAGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13212466 120 + 18905526 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGATATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAATAGAAATGTTAAATTCGCATATTTATGTACCCTCTCAAAGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60042294 120 - 72318688 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGATATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAATAGAAATGTTAAATTCGCATATTTATGTACACTCTCAAAGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 375891 120 - 1517660 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGATATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAATAGAAATGTTAAATTCGCATATTTATGTACACTCTCAAAGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3476202 120 + 6513552 TACTAGGGCAAACATCTTTGGCTTGCTAATCAGGTATCTTTTCCTAATCCT-TTTCCTCTTGCCTACCTCCCGAAAGAAATAGAAATGTTAAATTCGCATATTTATGTACACTCTCAAAGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105239639 119 + 117903854 taatggggcaaatatttttggcttgctaatcaaatttcttttcctaatcat-tttcctcttccctacctccctaaaGAAATAGAAATGTTATATTCTCATATTTATATACATTCTCAAAA- i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1628069 120 + 2203405 aaatggggcaaatatttttggcttgctaatcgtatttcttttcctaatcat-tttcccctttcctacctccctaaaGAAATAGAAATGTTAAATTCTCATATTTATATACATTCTCAAAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3580266 120 - 14941987 taatggggcaaatatttttggcttgctaatcatatttattttcctaatcat-tttcccctttcctacctccctaaaGAAATAGAAATGTTAAATTCTCATATTTATATACATTCTCAAAAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11221200 120 - 20685099 TGTTAGAGCCAATATGTTTAGCTTGTTGTTCTAATATCTTTTCCTGATCATCTTCCCCCTTGTTTTCTTGCCTAAAGAAGTAAAAAT-TCAGATTATCTTATTTCCACACCTTCTCATAGC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I e saiBol1.JH378121 19433055 0 - 31320352 C a score=631888.000000 s hg38.chr18_GL383571v1_alt 113743 70 + 198278 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGATACATACATAATGATTGCTCTA----CTAGAATTATCT-G s panTro5.chr18 65023761 66 + 78221452 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGATACATA----ATGATTGCTCTA----CTAGAATTATCT-G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64142861 70 + 77229886 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGATACATACATAATGATTGCTCTA----CTAGAATTATCT-G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5362376 66 + 17472758 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGATACATA----ATGATTGCTCTA----CTAGAATTATCT-G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139402526 66 - 152096393 TAAAGGTGGTCAGGTATTACAGTTTCACCTAATGAGACATA----ATGATTGCTCTA----CTAGAATTATCT-G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57351710 66 + 70235451 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGAGACATA----ATGATTTTTCTA----CTAGAATTATCT-G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63043107 66 - 75711847 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGAGACATA----ATGATTTTTCTA----CTAGAATTATCT-G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13595854 66 - 18804593 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGAGACATA----ATGATTTTTCTA----CTAGAATTATCT-G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13212586 66 + 18905526 TAAAGGTGGTCACGTATTACAGTTTCACCTAATGAGACATA----ATGATTTTTCTA----CTAGAATTATCT-G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60042414 67 - 72318688 TAAAGGTGGTCACGTATTACAGTTTCACCTAACGAGACATA----ATGATTTTTCTA----CTAGAATTATCTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 376011 66 - 1517660 TAAAGATGGTCACGTATTACAGTTTCACCTAATGAGACATA----ATGATTTTTCTA----CTAGAATTATCT-G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3476322 66 + 6513552 TAAAGGTGATCACGTATTACAGTTTCACCTAATGAGACATA----ATGATTGTTCTA----CCAGAATTATCT-G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105239758 65 + 117903854 TAAAGGTGGTCAAATGTTACAGTTTCACCTAATGAGACATA----ATGACTGTTCTA----CTAGAATTATGT-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433055 61 - 31320352 TAATGG----CACATGTTACAGTTTCACCTAATGAGACATA----ATGACTATTCTA----CTAGAATTATGT-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1628189 65 + 2203405 TAAAGGCGGTCACATGTTACAGTTTCACCTAATGAGACATA----ACGACTATTCTA----CTAGAATTATGT-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3580386 65 - 14941987 TAAAGATGGTCACATGTTACAGTTTCACCGAATAAGACATA----ATGACTATTCTA----CTAGAATTATGT-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11221320 71 - 20685099 TTAGGGTGGTCACACGTTACAATTCCATCCCGTGAGACATA---AATGATTATTCTCATTTCTGGCAATTTCT-G i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1254033 2862 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=7220319.000000 s hg38.chr18_GL383571v1_alt 113813 668 + 198278 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGAGGATGTAATGTGTTAATACTGGCAGTTATTTTGTTAGCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAAT-ACTAGCA---ACTTCCTTCCTCAAGGCTTTTTATGGTCTCA--GGGGG-------------------------------------AAA-AAAAAGTCATATTTGTTAAAGCCATTGCTTGAGATTTCTATCACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTCCTCACTGAGAAAGCAAAGCTGAAACATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAAGAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAAGAATTGGTATGAAGTTAGAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTGCCTATGCATGCGCATAACAATGGTGATTTTAAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTCATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGCTGAAACCTTAAAATGTT-AGAAACATGAAAACAGAAACTCCTAAGTGCCCA s panTro5.chr18 65023827 666 + 78221452 GGGAAGATTCTCTT--CCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGAGG-TGTAATGTGTTAATACTGGCAGTTATTTTGTTAGCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAAT-ACTAGCA---ACTTCCTTCCTCAAGGCTTTTTATGGTCTCA--GGGGG------------------------------------GAAA-AAAAAGTCGTATTTGTTAAAGCCATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTCCTCACTGAGAAAGCAAAGCTGAAACATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAAGAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAAGAATTGGTACGAAGTTAGAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTGCCTATGCATGGGTGTAATAATGGTGATTTTAAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTCATGATGAAGATATTTCTAAAACATAGCAAATATTTCGCAAGTTCTATTTAATGCTGAAACCTTAAAATGTT-AGAAACATGAAAACAGAAACTCCTAAGTGCCCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64142931 668 + 77229886 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGAGGATGTAATGTGTTAATACTGGCAGTTATTTTGTTAGCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAAT-ACTAGCA---ACTTCCTTCCTCAAGGCTTTTTATGGTCTCA--GGGGG-------------------------------------GAA-AAAAAGTCGTATTTGTTAAAAACATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTCCTCACTGAGAAAGCAAAGCTGAAACATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAAGAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAAGAATTGGTATGAAGTTAGAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTGCCTATGCATGCGCATAACAATGGTGATTTTAAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTCATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGCTGAAACCTTAAAATGTT-AGAAACATGAAAACAGAAACTCCTAAGTGCCCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5362442 668 + 17472758 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGAGGCTGTAATGTGTTAATACTGGCAGTTATTTTGTTAGCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAAT-ACTAGCA---ACTTCCTTCCTCAAGGCTTTTTATGGTCTCA--GGGGG------------------------------------AAAA-AAAAAGTCGTATTTGTTAAAGCCATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGGAAGTTTATTCCTCACTGAGAAAGCAAAGCTGAAACATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAAGAAGAATTGGCATGGG-CTAA----------------GGAAATTTA-GAAAGAATTGGTATGAAGTTAGAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGAATTGCCTATGCATGTGCATAACAATGGTGATTTTAAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTCATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGCTGAAACCTTAAAATGTT-AGAAACATGAAAACAGAAACTCCTAAGTGCCCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139402592 686 - 152096393 GGGAAGATTCTCTTTTCCCGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGAGGATGTAATATGTTAATACTGGCAGTTATTTTGTTACCATGAGCATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAGT-ACTAGCA---ACTTCCTTCCTCAAGACTTTTTATGGTCTCA--GGGAGaaaataa-aa----ataaaaat--------------aaaa-ataaaGTCGTATTTGTTAAAGCCATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTACTAGAAAGTTTATTCCTCACTGAGAAAGCAAAGCTGAAACATTCCAAGTTATTCCTTTGGTTCCGCCATTGGTTATGGGAAGAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAAGAATTGGTATGAAGTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTTCCTATGCATGCGCATAACAATGGTGATTTTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTTATGAAGAAGATATTTCTAAAACACAGCAAATATTTTCCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAGCAAAATCTCCTAAGTGCCCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57351776 704 + 70235451 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTATTCCTTCAATCTTGACAGAGGATGTAATGTGTTAATACTGACAGTTAGTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGATATCAGCAAACCACTGAACCAAT-ACTAGCA---GCTTCCTTCCTCGAGACTTTTTATGGTCTCA--GGGAGaaaaaaa-acaaaaaaaaaaacaaaaaacaaaaacaaaaa-caaaaaTTGTATTTGTTAAAATTATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTCACTGAGAAAGCAAAGCTGAAATATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAATAAGAATTGGCATGCG-CTAA----------------GGAAATTTATGAAATAATCAGTATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTTCCTATGTATGCATATAACAATGGTGATTCTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCGTTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACCACTAAGTGCTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63043173 702 - 75711847 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTATTCCTTCAATCTTGACAGAGGATGTAATGTGTTAATACTGACAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGATATCAGCAAACCACTGAACCAAT-ACTAGCA---GCTTCCTTCCTCGAGACTTTTTATGGTCTCA--GGGAGaaaaaaa-ac--aaaaaaaaacaaaaaacaaaaacaaaaa-caaaaaTTGTATTTGTTAAAATTATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTTGCTGAGAAAGCAAAGCTGAAATATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAATAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAATAATCAGTATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTTCCTATGTATGCATATAACAATGGTGATTCTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCGTTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACCCCTAAGTGCTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13595920 704 - 18804593 GGTAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACCGAGGATGTAATGTGTTAATACTGACAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGATATCAGCAAACCACTGAACCAAT-ACTAGCA---GCTTCCTTCCTCGAGACTTTTTATGGTCTCA--GGGAGAAAaaaa-acaaaaaaaaaaacaaaaaacaaaaacaaaaa-caaaaaTTGTATTTGTTAAAATTATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTCGCTGAGAAAGCAAAGCTGAAATATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAATAAGAAATGGCATGGG-CTAA----------------GGAAATTTATGAAATAATCAGTATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTTCCTATGTATGCATATAACAATGGTGATTCTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACCCCTAAGTGCTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13212652 699 + 18905526 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACCGAGGATGTAATGTGTT-ATACTGACAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGACATCAGCAAACCACTGAACCAAT-ACTAGCA---GCTTCCTTCCTCGAGACTTTTTATGGTATCA--GGGAGGaaaaaa-ac----aaaacaacaaaaaacaaaaacaaaaa-caaaaaTTGTATTTGTTAAAATTATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTCGCTGAGAAAGCAAAGCTGAAATATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAATAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAATAATCAGTATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTTCCTATGTATGCATATAACAATGGTGATTCTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACCCCTAAGTGCCCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60042481 699 - 72318688 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGAGGATGTAATGTGTTAATACTGACAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGACATCAGCAAACCACTGAACCAAT-ACTAGCA---GCTTCCTTCCTCGAGAATTTTTATGGTCTCA--GGGGGaagaaaa-cc----aaaaaaacaaaaaacaaaaacaaaaa-c-aaaaTTGTATTTGTTAAAGCCATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTCACTGAGAAAGCAAAGCTGAAATATTCCAAGTTATTCCCTTGGTTCTGCCATTGGTTATGGGAATAAGAATTGGCATGGG-CTAA----------------GTAAATTTATGAAATAATCAGTATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAACGTCCTTTTGATTTTCCTATGTATGCATGTAACAATGGTGATTCTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTACTAAAATTTAATTCATTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACTCCTAAGTGCCCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 376077 701 - 1517660 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCCTGACTGAGGATGTAATGTGTTAATACTGACAGTTATTTTGTTACCATGAGAATGTCAGAACATCCACCTCTGACATCAGCAAACCACTGAACCAAT-ACTAGCA---GCTTCCTTCCTCGAGACTTTTTATGGTCTCA--GGGAGAAAAAAACCC----AAaaaaacaaaaaacaaaaacaaaaa-caaaaaTTGTATTTGTTAAAATTATTGCTTGAGATTTCTATTACCTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTCGCTGAGAAAGCAAAGCTGAAATATTCCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAATAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAATAATCAGTATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTTGATTTTCCTATGTATGCATATAACAATGGTGATTCTGAATATCAGAATCATCTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCGTTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACCCCTAAGTGCCCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3476388 700 + 6513552 GGGAAGATTCTCTTTTCCTGGTAAAGAGATTTAAGCATCAGTTGCCATCAC-----CTTTTCCTTCAATCTGGACCGAGGATGTAATATTTTAATACTGGCAGTTACTTTGTTACCACGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAAT-ACTAGCA---ACTTCCTTCCTCGAGACTTTTTATGGTCTCAGGGGGGGaaaaaaa-ac----aaaaaaataacaaaaaaaaacaacaa--aaaaaTTGTATTTGTTAAAGCCATTGCTTGAGATTTCTATTACCTGAGGCTATAAGTATTTCTGGCTGCTAGAAAGTTTATTTCTCACTGAGAAAGCAAAGCTGAAATATTTCAAGTTATTCCTTTGGTTCTGCCATTGGTTATGGGAATAAGAATTGGCATGGG-CTAA----------------GGAAATTTATGAAATAATCAGCATGAATTTAAAAGAAACATTTTA----------------CATAAAATGAAGAGAAATGTCCTTTT-ATTTTCCTATGCATGCATATAACAATGGTGATTCTGAATATCAGAATCATTTAAATTCTGGA----GCATTGAACATTTAGGTCACAATAAGTGAAATTATTAAAATTTAATTCATTTATGATGAAGATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACCTTAAAATGTT-AGAAACATGAAAACAAAAACTCCTAAGTGCCCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105239823 667 + 117903854 GGGAAGATTCTCTTTCCCTGTTAAAGAGATTTTAGCATCTGTTGCCATCAC-----CTCTTCC-TCAATCTTGACTGTGTATGTAATGTCTTAATACTGGCAGTTATTTTGTTACCATGAGAATGTCAGAGAATCCACCTCTGACATCACCAAACCACTGAACCAATAAAAAGTA---ACTTCC-----------TTTTTATTGTCTCA--GG---------------------------------------AAAGAAAAAAATCAAGCATGTTAAAGCCATTGCTTGAGATTTCTATTACTTGAGGCTAGGCGTATTTCTGGCAGCTAGAAAGTTTATTCCTCACTGAGAAAG-AAAGCCAAAATATTCCTAGGTATGGCTTTGGTTTCACCATTGGTTATGTGAGACAGAATTGGCATGGGTTTAA----------------GGGAATTTATAAAAGAATTGGTGTGAAGTTAAAAGAAACATTTTAAGTTAAAAATAAACATAGTAAAAT-----GAAATGTCCTTCTGATTTTACTATGCATAAACAT---AATTGTGATTTTGAATAGTAGAATCATCCAACTTCTGGATGGAGTACTGAACATTTAGGTCACAATAAATGAAATTATTAAAATTTCCTTAGTTTATGATGAAAATATTTCTAAATCATAGCAAATATTTTGCAAGTTCGATTTAATGTTGAAACTTTAAAATGTT-AAAAACATGAAA-CAAAAACGTGCAAGTATCCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433116 655 - 31320352 GGGAAGATTCTCTTTCCCTGGTAAAGAGATTCAAGCATCTGCTGCCATCAT-----CTCTTCCTTCAATCTTGACTGTGGATGTAATGTCTTAATACTGGCAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCGCTGAACCAGT-ACTAGCA---ACTTCC-----------TTTTTATTGTCTCA--GG---------------------------------------AAAG-AAAAAATCAAATATGTTAAAGCCATTGCTTGAGATTTCTATTACTTGAGGCTAGAAGTATTTCCGGCTGATATAAAGTTTATTCTTCACTGAGAAAGCAAAGCTAAAATATTCCAAGCTATGGCTTTGCTTTTGCCATTGGTTGTGTGACACAGAATTGGCATGGGTTTAA----------------GGGAATTTATGAAAGAACTGGTGTGAAGTTAAAAGAAACATTTTA----------------CATAAAAT-----GAAATGTCCTTTTGATTTTACTATGCATAAACATAGCAATTGTGATTTTGAATAATAGAATCATCCAAATTTTGGATGGAACATTGAACATTTAGGTCACaataaatgaaattattaaaatttaattaatttatGATGAAAATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACTTTAAAATGTTAAAAAACATAAAA-CAAAAACGTATAAGTGTCCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1628254 654 + 2203405 GGGAAGATTCTCTTTCCCTGGTAAAGAGATTCAAGCATCTGTTGCCATCAC-----CTCTTCCTTTAATCTTGACTGTGGATGTAATGTCTTAATACTGGCAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACTACTGAACCAAT-ACTAGCA---ACTTCC-----------TTTTTATTGTCTCA--GG---------------------------------------AAAA-AAAAAATCAAATATGTTAAAGCCATTGCTTGAGACTTCTATTACTTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTCCTCACTGAGAAAGCAAAGCTAAAATATTCCAAGCTATGGCTTTGCTTTCGCCATTGGTTATGTGAGACAGAATTGGCATGGCTTTAA----------------GGGAATTTATGAAAGAATTGGTGTGAAGTTAAAAGAAACATTTTA----------------CATAAAAT-----GAAATGTCCTTTTGATTTTACTATGCATAAACATAACAATTGTGATTTTGAATAATAGGATCATCCAAATTCTGGATGGAGCATTGAACATTTAGGTCACAATAAATGAAATTATTAAAATGTAATTAATTTATAATGAAAATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGCTGAAACTTTAAAATGTT-AAAAACATGAAA-CAAAAACGTGTAAGTGTCCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3580451 655 - 14941987 GGGAAGATTCTCTTTCCCTGGTAAAGAGATTTAAGCATCTGTTGCCATCAC-----CTCTTCCTTCAATCTTGACTGTGGATGTAATGTCTTAATACTGGCAGTTATTTTGTTACCATGAGAATGTCAGAGCATCCACCTCTGACATCACCAAACCACTGAACCAAT-ACTAGCAACTACTTCC-----------TTTTTATTGTCTCA--GG---------------------------------------AAAG-AAAAAATCAAATATGTTAAAGCCATTGCTTGAGATTTCTATTACTTGAGGCTAGAAGTATTTCTGGCTGCTAGAAAGTTTATTCCTCACTGAGAAAGCAAAGCTAAAATATTCCAAGCTATGGCTTTGGTTTTGCCATTGGTTATGTGAGACAGAATTGGCATGGGTTTAA----------------GGGAATTTAAGAAAGAATTGGTGTGAAGTTAAAAGAAACATTTTA----------------CATAAAAT-----GAAATGTCCTTTTGATTTTACTATGCATAAACGTAAGAATTGTGATTTTGAATAATATAATCATCCAA--TCTGGATGGCGCATTGAACATTTAGGTCACAATAAATGAAATTATTAAAATTTAATTAACTTATGATGAAAATATTTCTAAAACATAGCAAATATTTTGCAAGTTCTATTTAATGTTGAAACTTCAAAATGTT-AAAAACATGAAA-CAAAAGCGTATAAGTGTCCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1256895 682 - 1406956 GGGAAGATTCTCTTTTCTGGGTAAAGATATTTAAGCATCTGTTGCTATCACTTTCTCTCTTCCTTCTATCTTGACTATGAATGTAGTAGCTTGATACTGGCACTTATTTTGCTACTATGAGAATGTCAGAGTGT-CATCCATGATGTTACTGAACCACTGAACCAAT-ATCAGCA---ACTTCCTTCCTCGAGGCCTTTTATTATCTCA--TGA--------------------------------------AAAA-ATAAATCCATATTTGTTACAGCCACTGGTTGGAATTTCTATTACTTAAAGCTAGATGCATTTCTAGCTGCTAGAAAGCCTATTCCTCACTGAGAGAGAAAAACTGAAGCAGTCCCAGCTATGCTTTTGGTTCTATCATTGGTTATAGGAAGAAGAGATGGCATGGA-CTTAATTAATGCCTGATCCTGGGAATTTATGTGAGAATTGGCATGGGGTTAAAAGAAACAATTTA----------------AATACAGTAAAAAGAAATGCTCCCTTGATATTCCTATGCATGCACATAAC-ATTGTGATTTTGGATATCTGAACCATCTAAATTCTAGA----GTAGGAAACATTTAGGTCACAAGTATTGAAACTATTAAAATTTACTTCATTCACGATGAAAGTATTTCTGAAACATAGTAAATATTTTGCAACTTCTATCTAA-GGTGAAACTGAAAAATGTT-AAAAACATGGAA---AAAATTCCTAAGTGTTCA i proCoq1.NW_012148742v1 I 2862 C 0 s otoGar3.GL873546 11221391 644 - 20685099 -GCCAGACTCT-TTTCCTG------GACACTGAAGCATCTGTGGCTGTCATTTTCTCTCTCCC----ATCTGGACTGTGAACGTAATGTCTTGAACCTGGCAGTGATTCTGCTACTCTGAGAATGTCCGACTGT-CGCCCCtgacattgctgaaccactgaacaaat-accagga---acttccttcctcaaggccttttattatctct--gaa--------------------------------------aaaa-ataaaaccgaatttgttaaagccactgcctgcgatttctattacttgaagccagaagcatttctagctgctaGAAAGCTCATCGGTCAGTGAGAAAGCAAAGCT---------CAAGCTGCAGTATTGTTTCCCTCATTGGTTATGGGAAGAAAAAATGGTCTGTA-CTTA--CCATAC---AGCCTGGGAATTTGTA-AACAATTGGCATGAGGTTAAAAGAAACTTCTTA----------------CCTAAAACGAAGGGAAATGTTCTTTGGATGTGCCCAGGCATACACATAAC-ATTGGGATTTTAGA-ATCTGAACCATCTAAATTCTGGA----GTATTAAATATTTAAGTCAAAAGTATTGAAACTATAAATATTTAATTCATTAATGATGAAACACTTTTGAAAACATAACAAATATATTGCAATTGCTCTCTCATGGTTAAATCTGAAAATGT------------AA---AAAATTTCTAAGTGTCCA i otoGar3.GL873546 C 0 I 292 e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=365805.000000 s hg38.chr18_GL383571v1_alt 114481 28 + 198278 TCAGCTTCGATCCTAAGCAAACTAATTG s panTro5.chr18 65024493 28 + 78221452 TCAGCTTCGATCCTAAGCAAACTAATTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64143599 28 + 77229886 TCAGCTTCGATCCTAAGCAAACTAATTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5363110 28 + 17472758 TCAGCTTCGATCCTAAGCAAACTAATTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139403278 28 - 152096393 TCAGCTTGGATCCTAAGCAAACTAATTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57352480 28 + 70235451 TCAGCTTGGATCCTAAGCAAACTAATTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63043875 28 - 75711847 TCAGCTTGGATCCTAAGCAAACTAATTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13596624 28 - 18804593 TCAGCTTGGATCCTAAGCAAACTAATTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13213351 28 + 18905526 TCAGCTTGGATCCTAAGCAAACTAATTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60043180 28 - 72318688 TCAGCTTGGATCCTAAGCAAACTAATTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 376778 28 - 1517660 TCAGCTTGGATCCTAAGCAAACTAATTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3477088 28 + 6513552 TCAGCTTGGATCCTAAGCAAACTAATTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105240490 28 + 117903854 TCAGCTTTGATCCTAAGCAAACTAATTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433771 28 - 31320352 TCAGCTTGAATCCTATGCAAACTAATTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1628908 28 + 2203405 TCAGCTTGAATCCTAAGCAAACTAATTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3581106 28 - 14941987 TCAGCTTGGATCCTAAGCAAACTAATTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1257577 28 - 1406956 TCAGTTTGGATCCTAAGTAAACTAATTG i proCoq1.NW_012148742v1 C 0 I 408 s otoGar3.GL873546 11222327 28 - 20685099 TCAGTTTGGATCCTAAGTAAGCAAATTA i otoGar3.GL873546 I 292 C 0 e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=620043.000000 s hg38.chr18_GL383571v1_alt 114509 66 + 198278 AGAGTTTACCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTCTGCTATTG s panTro5.chr18 65024521 66 + 78221452 AGAGTTTACCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTATAACAACTGTGAGGGCCTCTGCTATTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64143627 66 + 77229886 AGAGTTTACCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCCAAAACAACTGTGAGGGCCTCTGCTATTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5363138 66 + 17472758 AGAGTTTACCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTCTGCTATTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139403306 66 - 152096393 AGAGTTTACCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACGACTGTGAGGGCCTCTGCTATTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57352508 66 + 70235451 CAAGTTTATCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63043903 66 - 75711847 CAAGTTTATCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13596652 66 - 18804593 CAAGTTTATCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13213379 66 + 18905526 CAAGTTTATCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60043208 66 - 72318688 CAAGTTTATCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 376806 66 - 1517660 CAAGTTTATCTTAAATTTGTTTTTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3477116 66 + 6513552 CAAGTTTATCTTAAATTTGTTTGTATTGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGGCCTGTGCTATTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105240518 66 + 117903854 CAGGTTCATCTTAAAGCTGTTTGTATCGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGACCTGTGCTATGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433799 66 - 31320352 CAAGTTCATCCTAAAACTCTTTGTATCGA-------------------------------------------------------------------------TGATTGCCTACAACAACTGTGAGGACCTGTGCTATGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1628936 66 + 2203405 CAAGTTCATTTTAAAACTGTTTGTATCGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTGTGAGGACCTGTACTACGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3581134 66 - 14941987 CAAGTTCATCTTAAAACTGTTTGTATCGA-------------------------------------------------------------------------TGATTGCCTAAAACAACTATGAAGACCTGTGCTACGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11222355 139 - 20685099 CAAATTTACCTTAACATTGTATTTATTGATTGACTCCTCAAGATTAACAGTCAGGACCTGTACTTGTAAAATACCTTTACATACCTTAAAATTGTATTTGATTGACTCCCCAAGATAACAGTTAGGTCCCGTACTATTC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1257605 408 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=784731.000000 s hg38.chr18_GL383571v1_alt 114575 69 + 198278 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAAC--G-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT s panTro5.chr18 65024587 69 + 78221452 TTCCATTCTGAGGTGTCACTGGGAGTCTCAAAC--G-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64143693 69 + 77229886 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAAC--G-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5363204 70 + 17472758 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAAC--GAAGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139403372 71 - 152096393 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAACAGG-GAGGATTTA-CAGAGAGACGCTTTCCAATGCATCCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57352574 71 + 70235451 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAACAGG-GGGGATTTA-CAGAGGGATGCTTTCCAATGCATCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63043969 71 - 75711847 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAACAGG-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13596718 71 - 18804593 TTCCATTCTGAGGTGTCACTGGGAGTCCCAAACAGG-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13213445 71 + 18905526 TTCTATTCTGAGGTGTCACTGGGAGTCCCAAACAGG-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60043274 71 - 72318688 TTCCATTCTGAGGTGTCACTGCGAGTCCCAAACAGG-GGAGATTTA-CAGAGAGATGCTTTCCAACGCATCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 376872 71 - 1517660 TTCTATTCTGAGGTGTCACTGGGAGTCCCAAACAGG-GGGGATTTA-CAGAGAGATGCTTTCCAATGCATCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3477182 70 + 6513552 TTCCATTCTGAGGTGTCACTGGGAGT-CCAAACAGG-GAGGATTTA-CAGAGAGATGCTTTCCAACGCATCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105240584 72 + 117903854 TTACATTCTGAGATGTCACTAGGAGTCCCAAACAGG-GAGGATTTACCAGAGAGTTGCTCTCCAATCCTTCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433865 72 - 31320352 TTCCGTTCTGAGATGTCACTAGAAGTCCCACACAGG-GAGGATTTACCAGAGAGATGCTCTCCAATCCTGCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1629002 72 + 2203405 TTCCATTCTGAGATGTCACTAGGAGTCCCAAACAGG-GAGGATTTACCAGAGAGATGCTCTCCAATCCTTCCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3581200 72 - 14941987 TTCCATTCTGAGACATCATTAGGAGTCCCAAACACG-GAGGATTTACCACAGAGATGCTCTCCAATCCTTCCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1258013 71 - 1406956 TTCCATTCTGAAGTGTCACTGGGAGTCTCCAAAAGG-GGGAATTTA-TGGAGAGATACTCTCCACTGCATCCT i proCoq1.NW_012148742v1 I 408 I 807 s otoGar3.GL873546 11222494 69 - 20685099 TTCCATCCTGAAGTGTTACTGGGAGTTTTGAAA--G-GGGGACTTA-CAGAGAGATACTTCCTACTGCCTCCT i otoGar3.GL873546 C 0 C 0 e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=9573650.000000 s hg38.chr18_GL383571v1_alt 114644 967 + 198278 AAACCTCCACC------GTTTTCTGAACTCAAGAGCTGCTCTCCTTGTTTCCCTTGGCAATTCTCCATTGCCATTCTCCTCATCGGTTTATTACTCCATA----GACCCCATAGGCCAAAAACCCTCTGCTGAGGTCCaacatgctgttattttgtccatctttaaTTTATAAAGCCCATTGGTGAATGTGCTTGTTTTACCACTATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAACCTCCCAGCCTGCATATTTCAGGTATTTAATTCCTTTTCAAGTTAATAGGAAACATTTTTCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCAGACTAGGAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAGTTGTTAATAACCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGGC--------------------------------------------------TAAATTATTCT----------CATAACCACGGTTTCTTCCTTCTTGCTGTATCAGACAC---ATGATAACCATGATG----ATTCTTCTTCTGGGGTCCCATTGTCTTCTT---GCAATGTAGCTTTCATCAGCAACTTTGTCTCTCCACTAACCCCACCCCATGCTCAAGTGTTCAAACATGCCTGGCATGTTGCTGTCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCCTTCCTCATTTTGGTTAAATATTAG-AGAAATATCACTAACCTCTGCCTACAAGTATATCCAGTTGT---TAGATCTGACCcagtatttagagccattttacatatttatc-tttttataatttcaaaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtgccatgcctagccttctggctagaatccttgct-------------tcatggtcttat----tctctctcTTTCTATGGTTCCCT------------------------------CTCC s panTro5.chr18 65024656 973 + 78221452 AAACCTCCACCTCCACCGTTTTCTGAACTCAAGAGCTGCTCTCCTTGTTTCCCTTGGCAATTCTCCATTGCCATTCTCCTCATCGGTTTATTACTCCATA----GACCCCATAGGCCAAAAACCCTCTGCTGAGGTCCaacatgctgttattttgtccatctttaaTTTACAAAGCCCATTGGTGAATGTGCTTGTTTTACCGCTATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAACCTCCCAGCCTGCATATTTCAGGTATTTAATTCCTTTTCAAGTTAATAGGAAACATTTTTCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCAGACTAGGAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAGTTGTTAATAGCCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGGC--------------------------------------------------TAAATTATTCT----------CATAACCACCGTTTCTTCCTTCTTGCTGTATCAGACAC---ATGATAACCATGATG----ATTCTTCTTCTGGGGTCCCATTGTCTTCTT---GCAATGTAGCTTCCATCAGCAACTTTGTCTCTCCACTAACCCCACCCCATGCTCAGGTGTTCAAACATGCCTGGCATGTTGCTGTCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTGGTTAAATATTAG-AGAAATATCACTAACCTCTGCCTACAAGTACATCCAGTTAT---TAGATCTGACCCAGTATTTAGAACCATTTTACATATTTATC-TTTTTATAATTTCAAaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccgatatcacataactacactaatagcaagtgccatgcctagccttctggctagaatccttgct-------------tcacggtcttat----tctctctctTTCTATGGTTCCCT------------------------------CTCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64143762 967 + 77229886 AAACCTCCACC------GTTTTCTGAACTCAAGAGCTGCTCTCCTTGTTTCCCTTGGCAATTCTCCATTGCCATTCTCCTCATCGGTTTTTTACTCCATA----GACCCCATAGGCCAAAAACCCTCTGCTGAGGTCCaacatgctgttattttgtccatctttaaTTTATAAAGCCCATTGGTGAATGTGCTTGTTTTACCGCTATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAACCTCCCAGTCTGCATATTTCAGGTATTTAATTCCTTTTCAAGTTAATAGGAAACATTTTTCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCAGACTAGGAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAGTTGTTAATAACCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGGC--------------------------------------------------TAAATGATTCT----------CATAACCACCGTTTCTTCCTTGTTGTTGTATCAGACAC---ATGATAACCATGATG----ATTCTTCTTCTGGGGTCCCATTGTCTTCTT---GCAATGTAGCTTTCATCAGCAACTTTGTCTCTCCACTAACCCCACCCCATGCTCAGGTGTTCAAACATGCCTGGCATGTTGCTGTCCTAGTAGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTGGTTAAATATTAG-AGAAATATCACTAACCTCTGCCTACAAGTATATCCAGTTAT---TAGATCTGACCcagtatttagagccattttacatatttatc-tttttataatttcaaaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtgccatgcctagccttctggctagaatccttgct-------------tcacggtcttat----tctctctcTTTCTATGGTTCCCT------------------------------CTCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5363274 963 + 17472758 AAACCTCCACC------ATTTTCTGAACTCAAGAGCTGCTCTCCTTGTTTCCCTTGGCAATTCTCCATTGCCATTCTCCTCATC-GTTTATTACTCCATA----GACCCCATAGGCCAAAAACCCTCTGCTGAGGTCCAACATGCTGTTATTTTGTCCATCTTTAATTTATAAAGCCCATTGGTGAATGTGCTTGTTTTACCGCTATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAACCTCCCAGCCTGCATATTTCAGGTATTTAATTCCTTTTCAAGTTAATAGGACACATTTTTCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCAGACTAGGAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAGTTGTTAATAGTCC-TTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGGC--------------------------------------------------TAAATTATTCT----------CATAACCACCATTTCTTCCTTCTTGCTGTATCAGACAC---ATGATAACCATGATG----ATTCTTCTTCTGGGGTCCCATTGTCTTCTT---GCAATGTAGCTTCCATCAGCAACTTTGTCTCTCCACTAACCCCACCCCATGCTCAGGTGTTCAAACATGCCTGGCATGTTGCTGTCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTGGTTAAATATTAG-AGAAATATCACTAACCTCTGCCCACAAGTATATCCAGTTAT---TAGATCTGACCCAGTATTTAGAGCCATTTTACATATTTATC-TTTTTATAATTTCAAaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtgccatgcctagccttctggctagaatccttgct-------------tcacagtcttat------tctctctTTCTATGGTTCCCT------------------------------CTCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139403443 960 - 152096393 AAACCTGCACC------GTTTTCTGAACTCAAGAGCTGCTCTC--TGTTTCCCTTGGCAATTCTCCATTGCCATTCTCCTCACTGGT---TTACTCCGTA----GGCCCCATAGGCCAAAAACCCTCTGCTGAGGTCCAACATGCCATTATTTTGTCCTTCTTTAATTTATAAAGCCCATTGGTGAATGGGCTTGTTTTACCACCATTGTCTCTAGT--------------TGTCATTGATGTTTTGCTCAAACCTCCCAGCCTGCATATTTCAGGTATTTAATTCCTTTTTGAGTTAATAAGAAACATTTTTCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCAGACTAGGAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAGTTGTTAATAGCCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGGC--------------------------------------------------TAAATTATTCT----------CATAACCACTGTTTCTTCCTTCTTGCTGTATCAGACAC---A--ATAACCATGATG----ATTCTTCTTTTGGGGTCCCATTGTCTTCTT---GTAATGTAGCTTCCATCAGCAACTTTGTCTCTTTACTAACCCCATCCCATGCACAGGTGTTCAAACATGCCTGGCACGTTGCTGCCCTAGCTGTGAAGAGTGTTAAACCCGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTGTTTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCTTCTAGAAatatacctgagccagtatttagagccattttacatatttatc-tttttacaatttcaaaggtaaatataattgttatttccattttacgataacgaaa-tgag---catgaaagttaggtggctagaccaatatcacatacctaaactaatagcaagtcccatgcctagctttctggctagaatccttgct-------------tcatggtcctat----tctgtctctttCTATGGTTCCCT------------------------------CTCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57352645 964 + 70235451 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTCTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATAGGCCAAAAGCCCTCTGCTGAAGTCCAACATGTTGTTATTTTGTCCTTCTTTAATTTTTAAAGCCCATTGGTGAACGTGCTTGTTTTTCCACCATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAA-CTCCCAGCCTGCATATTTCAGGTATTTCGTTCCTTTTCAAGTTAATAGGAAACGTTTTCCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCATACTAGAAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCATAGAC------------AGCTT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACCACCGTTTCTTCCTTC---CTGTATCAGACAC---ACCATAACCATGATG----ATTCTCCTTTCGGGGCCCCATTATCTTCTT---GTAATGTACCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTGAAACATGCCTGCCATGTTGCTGCCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTCGTTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---TAGATCTGACCCAGTATTTAGAGCCATTTTACATATTTATCTTTTTTACAGTTTCAAaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtctcatgcctagctttctggctagaatccttgct-------------ACATGGTCCTATtctctctctctctttctatgtttccct------------------------------ctcC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63044040 964 - 75711847 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTCTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATAGGCCAAAAGCCCTCTGCTGAAGTCCAACATGTTGTTATTTTGTCCTTCTTTAATTTTTAAAGCCCATTGGTGAACGTGCTTGTTTTTCCACCATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAA-CTCCCAGCCTGCATATTTCAGGTATTTCGTTCCTTTTCAAGTTAATAGGAAACGTTTTCCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCATACTAGAAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCATAGAC------------AGCTT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACCACCGTTTCTTCCTTC---CTGTATCAGACAC---ACCATAACCATGATG----ATTCTCCTTTTGGGGCCCCATTATCTTCTT---GTAATGTACCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTGAAACATGCCTGCCATGTTGCTGCCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTCGTTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---TAGATCTGACCCAGTATTTAGAGCCATTTTACATATTTATCTTTTTTACAGTTTCAAaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtctcatgcctagctttctggctagaatccttgct-------------ACATGGTCCTATtctctctctctctttctatgtttccct------------------------------ctcC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13596789 964 - 18804593 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTCTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATAGGCCAAAAGCCCTCTGCTGAAGTCCAACATGTTGTTATTTTGTCCTTCTTTAATTTTTAAAGCCCATTGGTGAACGTGCTTGTTTTCCCACCATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAA-CTCCCAGCCTGCATATTTCAGGTATTTCGTTCCTTTTCAAGTTAATAGGAAACGTTTTCCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCATACTAGAAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCATAGAC------------AGCTT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACCACCGTTTCTTCCTTC---CTGTATCAGACAC---ACCATAACCATGATG----ATTCTCCTTTTGGGGCCCCATTATCTTCTT---GTAATGTACCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTGAAACATGCCTGCCATGTTGCTGCCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTCGTTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---TAGATCTGACCCAGTATTTAGAGCcattttacatatttatcttttttacagtttcaaaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtctcatgcctagctttctggctagaatccttgct-------------ACATGGTCCTATtctctctctctctttctatgtttccct------------------------------ctcC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13213516 963 + 18905526 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTGTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATAGGCCAAAAGCCCTCTGCTGAAGTCCAACATGTTGTTATTTTGTCCTTCTTCAATTTTTAAAGCCCATTGGTGAACGTGCTTGTTTTTCCACCATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAA-CTCCCAGCCTGCATATTTCAGGTATTTCGTTCCTTTTCAAGTTAATAGGAAACGTTTTCCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCATACTAGAAATGTTGGGCCTTAAAGATG------CAGTTGTGAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCATAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACCACCGTTTCTTCCTTC---CTGTATCAGACAC---ACCATAACCATGATG----ATTCTCCTTTTGGGGCCCCATTATCTTCTT---GTAATGTACCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTGAAACATGCCTGCCATGTTGCTGCCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTGGTTAGATGTTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---CAGATCTGACCCAGTATTTAGAGCCATTTTACATATTTATC-TTTTTACAGTTTCAAaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccagtatcacataactaaactaatagcaagtctcatgcctagctttctggctagaatccttgct-------------ACATGGTCCTATTCTCTCTCTCTCTTTCTGTGGTTCCCT------------------------------CTCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60043345 967 - 72318688 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTCTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATCGGCCAAAAACCCTCTGCTGAAGTCCAACATGTTGTTATTTTGCCCTTCTTTAATTTTTAAAGCCCATTGGTGAACGTCCTTGTTTTACCACCATTGTGTCTAAT--------------TGTCATTGATGTTTTGCTCAAACCTCCCAGCCTGCATATTTCAGGTATTTCGTTCCTTTTCAAGTTAATAGGAAACGTTTTTCCTTTCTCATATTCAACTATTCTATGGGGAAAAACCCATACTAGAAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACCACCGTTTCTTCCTTCTTGCTGTATCAGACAC---ACCATAACCATGATG----ATTCTCCTTTTGGGGCCCCATTATCTTCTT---GTAATGTACCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAAGTGTTGAAACATGCCTGCCATGTTGCTGCCCTAGCTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCGTTCCTCATTTTGGTTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---TAGATCTGACCCAGTATTTAGAGCCATTTTACATATTTATC-TTTTTacaatttcaaaggtaaatataattgttatttccattttaggataatggaa-tgagattcatgaaagttaggtggctagaccagtatcacataactaaactaatagcaagtcccatgcctagctttctggctagaatccgtgct-------------tcatggtcctattctctctctctCTTTCTATGGTTCCCT------------------------------CTCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 376943 967 - 1517660 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTCTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATAGGCCAAAAGCTCTCTGCTAAAGTCCAACATGTTGTTATTTTGTCCTTCTTTAATTTTTAAAGCCCATTGGTGAACGTGCTTGTTTTTCCACCATTGTCTCTAAT--------------TGTCATTGATGTTTTGCTCAAA-CTCCCAGCCTGCATATTTCAGGTATTTCGTTCCTTTTCAAGTTAATAGGAAACGTTTTCCCTTTCTCATACTCAACTATTCTATGGAGAAAAACCCATACTAGAAATGTTGGGCCTTCAAGATG------CAGTTGTTAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCATAGAC------------AACTT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACCACCGTTTCTTCCTTC---CTGTATCAGACAC---ACCATAACCATGATGATTCATTCTCCTTTTGGGGCCCCATTATCTTCTT---GTAATGTACCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTGAAACATGCCTGCCATGTTGCTGCCCTAGTTGTGAAGAGTGTTAAACCTGTATTTCATGACCTACTGGGAGTCCATTCCTCATTTTGGTTAGATGTTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---TAGATCTGACCCAGTATTTAGAGCCATTTTACATATTTATc-attttacagtttcaaaggtaaatataattgttatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccagtatcacataactaaactaatagcaagtctcatgcctagctttctggctagaatccttgct-------------ACATGGTCCTATTCTCTCTCTCTCTTTCTATGGTTCCCT------------------------------CTCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3477252 967 + 6513552 AAACCTCCAGC------GTTTTCTGAACTCAAGAGCTGCTCTCCCTGTTTACCTTGGCAATTCTCCATTGCCATTCTCATCA---GTTTATTACCCCATG----AGCCTCATAGGCCAAAAACCCTCTACTAAAGTCCAACATGTTGTTATTTTGTCCTTCTTTAATTTTTAAAGCTCATTGGTGAACGTGCTTGTTTTACCACCATTGTCTCTAAT--------------TGTCATTGATATTTTGATCAAACCCCCCAGCCTGAATATTTCAGGTATTTCGTTCCTTTTCAAATTAATAGGAAACATTTTTCCTTTCTCATACTTAACTATTCTATGGAGAAAAACCCATACTAGAAATGTTGGGCCTTAAAGATG------CAGTTGTTAATAG----------CCCTTTTA-AATCTTAAAACTGGGAAGGTAACCACAGAC------------AACCT---GGAAAAAGTAAGTTTTATTATAGTT----------------------------TTAGTTTTA-------------TAAATTATTCT----------TATAACTACCGTTTCTTCCTTCTTGCCGTATCAGACAC---ACCATAACCATGCTG----ATTCTCCTTTTGGGGCCCCATTATCTTCTT---GTAATGTAGCTTCCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTGAAACATGCCTGCTATGTTTCTGCCCTAGTTGTGAAGAGTGTTAAACCTGTTTTTCATGACCTACTTGGAGTCCATTCCTCATTTTGGTTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGTTCT---TAGATCTGACCCAGTATTTAGAGCCCTtttacttatttatc-tttttacaatttcaaaggtaaatataattattatttccattttaggataatgaaa-tgagattcatgaaagttaggtggctagaccaatatcacataactaaactaatagcaagtcccatgcctagctttctggctagaatccttgct-------------tcatggtcctattctctctctctCTTTCTATGGTTCCCT------------------------------CTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105240656 981 + 117903854 AAACCTCCACT------GTTTTCTGAACTGAAGAGCTGCTTTCCCTGTTTCCCTTGGCAATTCCCCATTGCCATTTTCTTCATTGGTTTATTGCCCTATA----TGTCGCATAGGCCAAAAACCCTCTGCTGAGGTCCAACACACTGTTATTTGATCCTTCTCTAATTTTTAATGCTTATTGGCGAATTTGCCTGTGTTCCCACCATTGTCTCTAATTGTCGGTATCTAACTGTCATTGATGTTTCACTCAAACCTCCCAGTCTGCATATTTCAGGTATTTAATTAATTTTCCACTTAATAGGAAACATTTTTCCTTTCTCATATTCAACTATTCTATGCAGAAAAACCCAGAATAGAAATGTTGGGTCTTAAAGATA------TAGTTGTTCATAG----------CCCTTTTT-AATCTCAACACTGGGAAGGTAACCACAGACCTTC------AAAACTTACCAAAAAAAGTAAGTTTTGTTATAGGC--------------------------------------------------TAAATTTTTTC----------CATAACTACTGTTTCTTCCATC---TTGCAGTAGACAC---ACCATAACCATGAGG----ATTCTTCTTCTGGAGCCCCATTATCTTCTT---GTAATGTAGCTTTCATCAGCAACTTTGTCTCTTCATTGACCCCACCCCATGCTCAGGTGTTCAAACATGCCTGCCATTTTGCTGCCCTGGTTGTGAAGCGTGTTAAACCTGTATTTCATGATCGACTGGGAGTCCATTCCTCATTTTGATTAGATATTAG-AGAAATATCACTAACCTCTACCTAGAAGTATATCCAGATCT---TAGATCTGACTCGATATTTAGAGCcattttacatatttatc-tttttataatctcaaaggtaaatataattgttatatccattttaggaaaatgaaa-tgaaattcacaaaagttaggtggctaggtcagtatcacataactaaacaaatacaaagtcCCATGCCTAGCTTTCTGGCAGGAATCCTTGCT-------------TCATGGTCCTATTCACTCCCTCTCTTTCTATTGTTCCCT------------------------------AGCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19433937 971 - 31320352 AAACCTCCACT------GTTTTCTGAACTGAAAAGCTTCTCTCCCTGTTTCCCTTGGCAATTCCACATTACCATTCTCCTCATTGGTTTATTGCCCCATA----TGTCTCATAAGCCAAAAACCCTCTGCTGAGATCCAGCACACTGTTATTTGATCCTTCTTTAATTTTTAATGCTTATTGGTGAATTTGCTTGTTCTCCCACCATTGTCTCTAATTGTCGGTGTCTAATTGTCATTGATGTTTCACTCAAATCTCCCAGCCTGCATATTTCAGGTATTTTATTCATTTTCCACTTAATTGGAAACATTTTCCCTTTCTCATATTCAACTATTCTATGGAGAAAAACCCAGACTAGAAATGTTGGGTCTTAAATATA------TAGTTGTTCATAG----------CCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTGTTATAGGC--------------------------------------------------TAAATTTTTCC----------CATAACTACCATTTCTTCCATC---TTGCAGTAGACAC---ACCATAACTACGAGG----ATTCTTCTTCTGGAGCCCCATTACCTTCCT---GTAATGTAGCTTTCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTCAGGTGTTCAAACATGCCTGTCATTTTGCTGACCTAGTGGTGAAGCCTGCTACACCTGTATTTCGTGATCTACTGGGAATCCATTCCTCATTTTGATTAGATGTTAG-AGAAATATCACTAATCTCTGCCTAGAAGTATATCCAGATCT---TAGATTTGACTGAATATTTAGAGCcattttacatatttatc-tttttataatctcaaaggtaaatataattgttatatccattttagg-aaataaaa-tgaaattcataaaagttaggtggctaggtcaatatcacataactaaacaaatagtaagatccatgcctagctttctggcaggaatccttgct-------------TCATGGTCCTATTCTCTCCTTCTGTTTCTATTGTTCCCT------------------------------ACCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1629074 971 + 2203405 AAACCTCCACT------GTTTTCTGAACTGAAGAGCTGCTCTCCCTGTTTCCCTTGGCAATTCCCCATTGCCATTCTCCTCATTGGTTTATTGCCCCATA----TGTCTCATAGGCCAAAAACCCTCTGCTGAGGTCCAACACACTGTTTTTCGATCCTTCTTTAATTTTTAATGCTTATTGGTGAATTTGCTTGTTTTCCCACCATTGTCTCTAATTGTCGGTGTCTAATTGTCATTGGTGTTTCACTCAAATCTCCCAGCCTGCATATTTCAGGTATTTAATTCATTTTCCACTTAATAGGAAACATTTTTCCTTTCTCATATTCAACTATTCTATGGAGAAAAACCTAGACTAGAAACGTTGTGTCTTAAATATA------TAGTTGTTCATAG----------CCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTGTTATAGGC--------------------------------------------------TAAATTTTTCC----------CATAACTACTGTTTCTTACAAC---TTGCAGTAGACAC---ACCATAACCACGAAG----ATTCTTCTTCTGGAGCCCCATTATCTTCTT---GTAATGTAGCTTTCATCAGCAACTTTGCCTCTTCACTAACCCCACCCCATG-TCAGGTGTTCAAACATGCCTGTCATTTTGCTGCCCTAGTTGTGAAGCCTGCTAAACCTGTATTTCATGATCTACTGGGAGTCCATTCCTCATTTTGATTATATATTAG-AGAAATATCACTAATCTCTGCCTAGAAGTATATCCAGATCT---TAGATCTGACTCAATATTTAGAGCCATTTTACATATTTATC-TTTTTATAATCTCAAAGATAAATATAATTGTTATATCCATTTTAGGAAAATGAAA-TGAAATTCATAAAAGTTAGGTGGCTAGGTCAATATCACATAACTAAACAAATAGAAAGTCCCATGCCTAGCTTTCTGGCAGGAATCTTTGCT-------------TCATGGTCCTATTCTCTCCCTCTCTTTCTATTGTTCCCT------------------------------ACCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3581272 972 - 14941987 AAACCTCCACT------GTTATCTGAACTGAAGAGCTACTCTCCCTGTTTCCCTTGGAAATTCCCCATTGCCATTCTCCTCATTGGTTTATTGCCCCATA----TATCTCATAGGTCAAAAACCCTCTGCTGAGGCCCAACACGGTGTTATTTGATCCTTCTTTAATTTTTAATGCTTATTGGTGAATTTGCTTGTTTTCCCACCATTGTCTCTAATTGTTGGTGTCTAATTGTCATTGATGTTTCACTCAAATCTCCCAGCCTGTATATTTCAGGTATTTACTTCATTTTCCACTTAATAGGAAACATTTTTCCTTTCTCATATGCAACTATTCTGTGGAGAAAAACCCAGACTAGAAATGTTGGGCCTTAAAGATA------TAGTTGTTTATAG----------CCCTTTTT-AATCTCAAAACTGGGAAGGTAACCACAGAC------------AACTT---GGAAAAAGTAAGTTTTGTTATAGGC--------------------------------------------------TAAATTTTTCC----------CATAACTACTGTTTCTTCCATC---TTGCAGTAGACAC---ACCATAACCATGAGG----ATTCTTCTTCTGGAGCCCCATTATCTTCTT---GTAATGTAGCTTTCATCAGCAACTTTGTCTCTTCACTAACCCCACCCCATGCTTAGGTGTTCAAATATGCCTGCCATTTTGCTGCCCTAGTTGTGAAGCATGTTAAGCCTATATTTCATGATCTACTGGGAGTCCATTCCTCATTTTGATTAGATATTAG-AGAAATATCACTAACCTCTGCCTAGAAGTATATCCAGATCT---TAGATATGACTCAATATTTAGAGCcattttacatatttatc-tttttataatctcaaaggtaaatataattgttatatccattttaggaaaatgaaa-tgaaattcataaaagttaggtggctaggtcagtatcacataactaaacaaatagaaagtcCCATGCCTAGCTTTCTGGCAGGAATCCTTGCT-------------TCATGGTCCTATTCTCTCCCTCTCTTTCCATTGTTCCCT------------------------------ACCC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11222563 1063 - 20685099 AAACCTCCACT------TTGCTCCGAGCCCAGGCAATGGTCCCCT--GTTCCCTTGGCAACTCTCTCTTGCCATTCTCTACACCAGCTCATGACCCCATGAGTCAGCCCTACTGGCCAAAACCACTCTTCTGAGGCCTACCACGCTGTCACTGGGCCCTTCTTTAACTTCTAGTGTGCACTGGGGAATTTGCTTGTTTCAACACCATGGTCTCTAAT--------------------TGATCTTTCTCTCATACCTTCCAGCCTCCAAATTTTAAGTATT--AGTTCCCTTCCAGTTAAAAGGAAACTTTTT---GTTCTGATATTCAACTCTTCTATACAGAAAAACACAGACCATAAATATTGGGCCTTAAAGCTGTTTAAACAATTGTTAATGG----------CCCTTTTTAAATCTCAAAATGAGAAATATACTCTCTACCCCCTCTCCCAAGAACTG---AGAAGCAGTAAGTTGTATTACAGGCTAAATTATAAAATCCTATTACATAACTATTAATTTTACGTAACTAATAGTTACATAATTTTATTACATAACCATAACTATTGTTTCTTCTTTC---TTGTATCTGGTGTCTGACCGGATCCACGTCG----GTTCTACTTTGCGGGACCTGCTGTCTTTTCTTAATAATGTAGGTTCCTTCGGCCACTTG---TCTTAACTG--TCCACCGC-TGCTCAGGACTGCCGACCTGTCTGCCGTGTTACCTCCCTAGTTGGGAAGAGCGTTTAACGCGTAACTCAAGACCTGTTTG---------CTTTATCTGGGTTACATTTTAGAAAAAATGGCACTGAACTCTGCATGGAGGTACATCCAATTGT---TAGATTTGACTCAGTATGGTGAGGTAGtttacatatttatc-tttttataatctcaaaagcagaaagaattgttacttaaa-cttaggataatgaaattgaaattcatgaaaataaggtggccagatcaacatcacagaactaaatgagcaggaagttccaggtctggctttgtggctcgaagccctgctGGTCAGTCGTTGCTCATAAtctttctctccctctctctttctctctctcCTCCTTCATGTGTGTGTGTCTCCTCCCTTTCTACTCC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112291634 1289 - 122678785 I a score=1335525.000000 s hg38.chr18_GL383571v1_alt 115611 123 + 198278 ATATAAATAAACTGGCACTAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGATATGCATCTC-------------------TTCAACTTGAGGAATTCCATTGCTTTAGAGTCTCAAGAATA-- s panTro5.chr18 65025629 123 + 78221452 ATATAAATAAACTGGCACTAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGATATGCATCTC-------------------TTCAACTTGAGGAATTCCATTGCTTTAGAGTCTCAAGAATA-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64144729 123 + 77229886 ATATAAATAAACTGGCACTAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGATATGCATCTC-------------------TTCAACTTGAGGAATTCCAATGCTTTAGAGTCTCAAGAATA-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364237 123 + 17472758 ATATAAATAAACTGGCACTAAGC--------------------------------TATTACCAATAAGAACTCGACATCTCTAGAACATATGCAGATGCACAGATATGCATCTC-------------------TTCAACTTGAGGAATTCCATTGCTTCAGAGTCTCAAGAATA-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404403 123 - 152096393 ATATAAATAAACTGGCACCAGGC--------------------------------TATTACCAATAAAAACTCAACATCTCTAGAACATATGCAGATGCACAGATATGCATCTC-------------------TTCAACTCGAGGAATTCCATTGCTTTAGAGTCTCAAGAGTA-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353609 123 + 70235451 ATATAAATAAACTGGCATCAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGCTATGCAACCC-------------------TTCAACTCGAGAAATTCCATTGCCTTAGAGTCTCAAGAATA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045004 123 - 75711847 ATATAAATAAACTGGCATCAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGCTATGCAACCC-------------------TTCAACTCGAGAAATTCCATTGCCTTAGAGTCTCAAGAATA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13597753 123 - 18804593 ATATAAATAAACTGGCATCAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGCTATGCAACCC-------------------TTCAACTCGAGAAATTCCATTGCCTTAGAGTCTCAAGAATA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214479 123 + 18905526 ATATAAATAAACTGGCATCAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGCTATGCAACCC-------------------TTCAACTCGAGAAATTCCATTGCTTTAGAGTCTCAAGAATA-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044312 123 - 72318688 ATATAAATAAACTGGCATCAAGC--------------------------------TATTACCAATAAGAACTCAACATCCCTAGAACATACGCAGATGCACAGCTATTCAACCC-------------------TTCAACTCGAGAAATTCCACTGCCTTAGAGTCTCAATAATA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 377910 123 - 1517660 ATATAAATAAACTGGCATCAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGCTATGCAACCC-------------------TTCAACTCGAGAAATTCCATTGCTTTAGAGTCTCAAGAATA-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478219 155 + 6513552 ATATAAATAAACTGGCATCAAGCCAGTTTATTTATATCTAATAAGCCAGTTTATTTATATCTAATAAGAACTCAACATCTCTAGAACATATGCAGATGCACAGCTATGCAACCC-------------------TTCAACTCGAGAAATTCCATTGCCTTAGAGTCTCAAGAATA-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241637 123 + 117903854 ACATAAATAAATTGGCACCAAGC--------------------------------TATGACCAATGATAACTCAACATCTCTAGAACATATGCAGATGCATATGTATATATCCC-------------------TTCAACTCTAGGAATTTCATTGCCTTAGAGTCTCAAGAATA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19434908 142 - 31320352 ATATAAATAAACTGGCACCAAGC--------------------------------TATTACCAATAAGAACTCAACATCTCTAGAACATATGCAGACACACAGATATATATCCCTAAGTTGAACATATTCCTATTCAACTCTAGGAATTTCATTGCCTTAGAGTCTCAAGAATA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1630045 123 + 2203405 ATATAAATAAATTGGCACCAAGC--------------------------------TATTACCAATGAGAGCTCAACATCTCTAGAACACATGCAGACGCACAGATATATATCCC-------------------TTCAACTCTAGGAATTTCATTGCCTTAGAGTCTCAAGAATA-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3582244 123 - 14941987 ATATAAATAAATTGGCACCAAGT--------------------------------TATTACCAAAGAGAACTCAACATCCCTAGAACATATGCAGACACACAGATATATATCCC-------------------TTCAACTCTAGGAATTTCATTGCCTTAGAGTCTCCAGAATA-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11223626 121 - 20685099 ATATTAATAAACCAGCCTCAA-C--------------------------------TACCACGCAAGACGCCTGAAAACCTCTACATCATCTGTAGACACACAGATCCATGCACC-------------------TTCGACTCTAGAAATTTAATTG-TTTGTATTCTCGGGAATA-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112292923 123 - 122678785 atatatataAACTGACCCCAAAC--------------------------------TCTTACTAGTAAG--TTAAACAACTCTAGAGCAGAGGCAGATGCACAAATATGCATCTC-------------------TTCAACTCTAGAAATTTAATTGTCTTAAAGTCTCAAAAAAATA i canFam3.chr1 I 1289 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=204589.000000 s hg38.chr18_GL383571v1_alt 115734 22 + 198278 TACCTTAACT--AAAGTCTAATCT s panTro5.chr18 65025752 22 + 78221452 TACTTTAACT--AAAGTCTAATCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64144852 22 + 77229886 TACTTTAACT--AAAGTCTAATCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364360 22 + 17472758 TACTTTAACT--AAAGTCTAATCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404526 23 - 152096393 TACTTTAACT-AAAAGTGTAATCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353732 23 + 70235451 TACTTTAACT-AAAAGTTTAATCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045127 23 - 75711847 TACTTTAACT-AAAAGTTTAATCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13597876 23 - 18804593 TACTTTAACT-AAAAGTTTAATCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214602 23 + 18905526 TGCTTTAACT-AAAAGTCTAATCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044435 23 - 72318688 TACTTTAACT-AAAAGTCTAATCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378033 23 - 1517660 TGCTTTAACT-AAAAGTCTAATCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478374 23 + 6513552 TACTTTAACT-AAAAGTCTAATCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241760 23 + 117903854 TACTTTAACT-AAAAGTCTAATCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19435050 23 - 31320352 TACTTTAACT-AAAAGTCTAATCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1630168 17 + 2203405 TACTTT-------AAGTCTAATCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3582367 23 - 14941987 TACTTTAACT-AAAAGCCTAATCT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112293046 24 - 122678785 AACCTTTACAAAAGAGTCTAATCC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11223747 0 - 20685099 C a score=165240.000000 s hg38.chr18_GL383571v1_alt 115756 16 + 198278 TTCATTCATAATAAAT s panTro5.chr18 65025774 16 + 78221452 TTCATTCATAATAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64144874 16 + 77229886 TTCATTCATAATAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364382 16 + 17472758 TTCATTCCTAATAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404549 16 - 152096393 CTCATTCATAATAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353755 16 + 70235451 TTCATTCATAATAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045150 16 - 75711847 TTCATTCATAATAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13597899 16 - 18804593 TTCGTTCATAATAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214625 16 + 18905526 TTCATTCATAATAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044458 16 - 72318688 TTCATTCATAATAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378056 16 - 1517660 TTCATTCATAATAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478397 16 + 6513552 TTCATCCATAATAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241783 16 + 117903854 TTCATTCATAATAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19435073 16 - 31320352 TTCATTCATAATACAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1630185 16 + 2203405 TTCATTCATAATAAAT i cebCap1.NW_016107689v1 C 0 I 7 s aotNan1.NW_018502140v1 3582390 16 - 14941987 TTCATTCATAATAAAT i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e otoGar3.GL873546 11223747 0 - 20685099 C a score=9555.000000 s hg38.chr18_GL383571v1_alt 115772 1 + 198278 T s panTro5.chr18 65025790 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64144890 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364398 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404565 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353771 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045166 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13597915 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214641 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044474 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378072 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478413 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241799 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19435089 1 - 31320352 T i saiBol1.JH378121 C 0 I 2 s aotNan1.NW_018502140v1 3582406 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e otoGar3.GL873546 11223747 0 - 20685099 C e cebCap1.NW_016107689v1 1630201 7 + 2203405 I a score=-1377.000000 s hg38.chr18_GL383571v1_alt 115773 1 + 198278 G s panTro5.chr18 65025791 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64144891 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364399 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404566 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353772 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045167 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13597916 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214642 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044475 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378073 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478414 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s aotNan1.NW_018502140v1 3582407 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 I 5 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e calJac3.chr13 105241800 0 + 117903854 C e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e otoGar3.GL873546 11223747 0 - 20685099 C e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=594235.000000 s hg38.chr18_GL383571v1_alt 115774 112 + 198278 TTATggccaggcatagtggctcacacctgcaatcccagcactttaggaggctgaggcgggcggatcacgaggtcaggaattcgagaccagcctgaccaacaaggtgaaaccc s panTro5.chr18 65025792 112 + 78221452 TTATggccaggcatagtggctcacgcctgcaatcccagcactttaggaggctgaggcgggcggatcacgaggtcaggaattcgagaccagcctgaccaacaaggtgaaaccc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64144892 112 + 77229886 TTATggccaggcatagtggctcacacctgcaatcccagcactttaggaggctgaggcgggcggatcacgaggtcaggaattcgagaccagcctgaccaacaaggtgaaaccc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364400 112 + 17472758 TTATggccaggcatagtggctcacgcctgcagtcccagcgctttagaaggctgaggcgggcggatcacgaagtcaggaattcgagaccagcctgaccaacaaggtgaaaccc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404567 111 - 152096393 TTATggccgggcatagtggctcacgcctgcaatcccagcggtttaggaggctgaggtgggtggatcacgaggtcaggaattcgagaccagcctgactaacaaggtgaaa-cc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353773 111 + 70235451 TTAGggctgggcatggtggctcacgcatgcaatcccagcac-ttgggaggatgaggtgagcggatcacgaggtcaggaattcaagaccagcctgaccaacgtggtgaaaccc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045168 111 - 75711847 TTAGggctgggcatggtggctcacgcatgcaatcccagcac-ttgggaggatgaggtgagcggatcacgaggtcaggaattcaagaccagcctgaccaacgtggtgaaaccc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13597917 111 - 18804593 TTAGggctgggcatggtggctcacgcatgcaatcccagcac-ttgggaggatgaggtgagcggatcacgaggtcaggaattcaagaccagcctgaccaacgtggtgaaaccc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214643 111 + 18905526 TTAGggctgggcatggtggctcacgcatgcaatcccagcac-ttgggaggatgaggtgagcagatcacgaggtcaggaattcaagaccagcctgaccaacgtggtgaaaccc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044476 111 - 72318688 TTAGggccaggcatggtggctcacgcatgcaatcccagcac-ttgggaggctgaggtgggcggatcacgaggtcaggaattcaagaccagcctgaccaacatggtgaaaccc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378074 111 - 1517660 TTAGggctgggcatggtggctcacgcatgcaatcccagcac-ttgggaggatgaggtgagcagatcacgaggtcaggaattcaagaccagcctgaccaacgtggtgaaactc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478415 111 + 6513552 TTAGggctgggcatggtggctcacacatgcaatcccagcac-ttgggaggctgaggtgggcagattatgaggtcaggaattcaagaccagcctgaccaatgtggtgaaactc i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e calJac3.chr13 105241800 0 + 117903854 C e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e otoGar3.GL873546 11223747 0 - 20685099 C e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=306922.000000 s hg38.chr18_GL383571v1_alt 115886 55 + 198278 catctccactaaaaatacaaaaattagctgggcgtggtggcacgcacctgtaatc s panTro5.chr18 65025904 55 + 78221452 catctccactaaaaatacaaaaattagccgggcgtggtggcacgcacctgtaatc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145004 55 + 77229886 catctccactaaaaatacaaaaattagctgggcgtggtggcacgcacctgtaatc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364512 55 + 17472758 catctccactaaaaatacaaaaattagccgggcgtggtggcacgcacctgtaatc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404678 55 - 152096393 cgtctccactaaaaatacaaaaattagccaggcgtggtggcacacacctctaatc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353884 55 + 70235451 catctccactaaaaatacaaaaattagccaggagtggtggcacgcacctgtaatc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045279 55 - 75711847 catctccactaaaaatacaaaaattagccaggagtggtggcacgcacctgtaatc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598028 55 - 18804593 catctccactaaaaatacaaaaattagccaggagtggtggcacgcgcctgtaatc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214754 55 + 18905526 tgtctccactaaaaataaaaaaattagccaggcgtggtggcacgcacctgtaatc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044587 55 - 72318688 cgtctccactaaaaatacaaaaattagccaagtgtggtggcacgcatctgtaatc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378185 55 - 1517660 cgtctccactaaaaataaaaaaattagccaggcgtggtggcacgcacctgtaatc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478526 55 + 6513552 cgtctccactaaaaatacaaaagttagccgggcgtggtggcgtgcacctgtaagc i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11223747 22 - 20685099 CACCTTAACTAAAAG---------------------------------TGTAATC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e calJac3.chr13 105241800 0 + 117903854 C e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=707580.000000 s hg38.chr18_GL383571v1_alt 115941 136 + 198278 ccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggcggaagttgcagtgagccgagatcgcaccattgcactccagcctgggagacagagtgggactccgtatcaaagaaaaaaa-aaaTTAAA s panTro5.chr18 65025959 136 + 78221452 ccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggcggaagttgcagtgagctgagatcgcaccattgcactccagcctgggcgacagagtgggactccgtatcaaagaaaaaaa-aaaTTAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145059 136 + 77229886 ccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggcggaagttgcagtgagccgagatcgcaccattgcactccagcctgggcgacagagtgggactccgtatcaaagaaaaaaa-aaaTTAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364567 135 + 17472758 ccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggcggaagttgcagtgagccgagatcgcaccattgcactccagcctgggcgacagagtgggactccatatcaaag-aaaaaa-aaaTTAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404733 136 - 152096393 ccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcatgccattgcactccagcctgggtgacagagtgagactccgtatcaaagaaaaaaa-aaaTTAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57353939 137 + 70235451 ccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcactattgtactccggcctgggtgacagagcgaggctccgtatcaaagaaaaaaataaaataaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045334 137 - 75711847 ccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcactattgtactccggcctgggtgacagagcgagactccgtatcaaagaaaaaaataaaataaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598083 137 - 18804593 ccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcactattgtactccggcctgggtgacagagcgagactccgtatcaaagaaaaaaataaaataaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214809 137 + 18905526 ccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaagcagaggttgcagtgagccgagatcgcgctattgtactccagcctgggtgacagagcgagactccgtatcaaagaaaaaaataaaataaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044642 131 - 72318688 ccagctactcaagaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccgagttcgcgctattgcact-cggcctgggtgacagaatgagactccgtatcaaagaaaaaaaca-----aa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378240 137 - 1517660 ccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcgctattgtactccggcctgggtgacagagcgagactccgtatcaaagaaaaaaataaaaTTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478581 113 + 6513552 tctgctactcaagaggctgagtcaggagaatcgcttgaac------------------------ccgagatcgcgctattgcactctggcctgggtgacagagcgagactccgtatcaaagaaaaaaaTTAAATTAA i colAng1.NW_012115433v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e calJac3.chr13 105241800 0 + 117903854 C e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e otoGar3.GL873546 11223769 0 - 20685099 C e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=7098.000000 s hg38.chr18_GL383571v1_alt 116077 1 + 198278 A s panTro5.chr18 65026095 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145195 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364702 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404869 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57354076 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045471 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598220 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214946 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044773 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378377 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478694 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11223769 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e calJac3.chr13 105241800 0 + 117903854 C e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112293070 0 - 122678785 C e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=54761.000000 s hg38.chr18_GL383571v1_alt 116078 10 + 198278 TTAATGAATA s panTro5.chr18 65026096 10 + 78221452 TTAATGAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145196 10 + 77229886 TTAATGAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364703 10 + 17472758 TTAATAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404870 6 - 152096393 TT----AATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57354077 10 + 70235451 TTAATAAATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045472 10 - 75711847 TTAATAAATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598221 10 - 18804593 TTAATAAATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214947 10 + 18905526 TTAATAAATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044774 10 - 72318688 TTAATAAATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378378 10 - 1517660 TTAATAAATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478695 10 + 6513552 TTAATAAATA i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11223770 10 - 20685099 TTTATCCTTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112293070 10 - 122678785 TTAATAAATT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e calJac3.chr13 105241800 0 + 117903854 C e dasNov3.JH575754 470395 889 - 2150887 I e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=15082.000000 s hg38.chr18_GL383571v1_alt 116088 2 + 198278 GT s panTro5.chr18 65026106 2 + 78221452 GT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145206 2 + 77229886 GT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364713 2 + 17472758 GT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404876 2 - 152096393 GT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57354087 2 + 70235451 GT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045482 2 - 75711847 GT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598231 2 - 18804593 GT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214957 2 + 18905526 GT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044784 2 - 72318688 GT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378388 2 - 1517660 GT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478705 2 + 6513552 GT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241800 1 + 117903854 -T i calJac3.chr13 C 0 I 1 s otoGar3.GL873546 11223780 2 - 20685099 AT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112293080 2 - 122678785 AT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I e saiBol1.JH378121 19435090 2 - 31320352 I a score=36414.000000 s hg38.chr18_GL383571v1_alt 116090 4 + 198278 TACT s panTro5.chr18 65026108 4 + 78221452 TACT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145208 4 + 77229886 TACT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364715 4 + 17472758 TACT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404878 4 - 152096393 TACT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57354089 4 + 70235451 TACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045484 4 - 75711847 TACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598233 4 - 18804593 TACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214959 4 + 18905526 TACT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044786 4 - 72318688 TACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378390 4 - 1517660 TACT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478707 4 + 6513552 TACT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241802 4 + 117903854 TACA i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19435092 4 - 31320352 TACA i saiBol1.JH378121 I 2 C 0 s otoGar3.GL873546 11223782 4 - 20685099 TACA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112293082 4 - 122678785 TACT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e aotNan1.NW_018502140v1 3582408 5 - 14941987 I e cebCap1.NW_016107689v1 1630201 7 + 2203405 I a score=12208411.000000 s hg38.chr18_GL383571v1_alt 116094 1171 + 198278 AATACATTTGA-TTTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAATTAAGAATTAACCTGGACAAATGATAGTTAAAAGTTCAAGAGAAA---TATAACCA-TTTTGGGGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACAAAGACTATCACACTAAAATATAGTTACATACTGGATAAT----TATGTATGTG----ACTGTGCCAAACAGCA-TTTTAA----TTATACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATGAGCCAAAATTTAACTTACTGCCACCAATAAATGAGAGGTACTT-ACTGAGCTAATAAAACATACTA-------------------------------AGTTAAGAATTTTTAAGAACTATATAAATTTAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGATTTCTTCATCAAACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTATGATTATCACTTTTCCCTTTACAATATTACT-TCAGACATCAGAGGAAAGCGGGTGTGAATATGTGGGGATGAG-----GGGCGTGCATCCTTGCATGTGCTCTATGTACTTCGATTTCACTGTTGTGTGGTACCTCATGGTGCTGCTCTATTGATAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACTGAGTAGATTAAGCTGGAAAAATTGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGCTATTTTCTGTGTTTCCGTCAAAACCGCCCTGCTATTGATAAAGG-------------ACCCAAGAAAACCACGAGGTTTTCATTTAGGATCATAATTATCCTTGATGAAAATTATCATGCTTTTGAAGACCTGCCTTAGACaaacaaa-------------------------ac--acaa-----taaaaa--aa-aaa---aa----aCCAGTACATTATGGTAGCTTGATGTGTAACATGCATTTGATTGAGAACTA----GAATACTAGCTACACTAAATTTTTAAAAGTTCCGAAAAGGA-----CTAAT-GAAAGTACCAGAGAAATTTTTATGGAAGAGAGAG------------------------------AGAGAATAGGTTCATTGGATGTGAGAAAGTGACTTGGTCATAGAATAAACACTAAATTTTTCAAAGTTTT-AAGTATTCTGTATTTCAGAGTAATATTATTAAGC s panTro5.chr18 65026112 1185 + 78221452 AATACATTTGA-TTTTATCTCAGTTGCTCAACCAAAAATGTGCAAGAATTAAGAATTAACCTGGACAAATGATAGTTAAAAGTTCAAGAGAAA---TATAACTA-TTTTGGGGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACAAAGACTATCACACTAAAATATAGTTACATACTGGATAAT----TATGTATGTG----ACTGTGCCAAACAGCA-TTTTAA----TTATACTAAAACATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATGAGCCAAAATTTAACTTACTGCCACCAATAAATGAGAGGTACTT-ACTGAGCTAATAAAACATACTA-------------------------------AGTTAAGAATTTTTAAGAACTATATAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGATTTCTTCATCAAACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTATGATTATCACTTTTCCCTTTACAATATTACT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGAG-----GGGCGTGCATCCTTGCATGTGCTCTATGTACTTCAATTTCACTGTTGTGTGGTACCTCATGGTGCTGCTCTATTGATAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACCGAGTAGATTAAGCTGGAAAAATTGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGCTATTTTCTGTGTTTCCGTCAAAACCGCCCTGCTATTGATAAAGGGCG-TTTTGGAGGACCCAAGAAAACCACGAGGTTTTCATTTAGGATCATAATTATCCTTGATGAAAATTATCATGCTTTTGAAGACCTGCCTTAGACAAACAAA-------------------------AC--ACAT-----TAAAAA--AA-AAA----------CCAGTACATTATGGTAGCTTGATGTGTAACATGCATTTGATTGAGAACTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTACCAGAGAAATTTTTATGGAAGAGAGAG------------------------------AGAGAATAGGTTCATTGGGTGTGAGAAAGTGACTTGGTCATAGAATAAACACTAAATTTTTCAAAGTTTT-AAGTATTCTGTATTTGAGAGTAATATTATTAAGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64145212 1186 + 77229886 AATACATTTGA-TTTTATCTCAGTTGCTCAACCAAAAATGTGCAAGAATTAAGAATTAACCTGGACAAATGATAGTTAAAAGTTCAAGAGAAA---TATAACCA-TTTTGGGGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACAAAGACTATCACACTAAAATATAGTTACATACTGGATAAT----TATGTATGTG----ACTGTGCCAAACAGCA-TTTTAA----TTATACTAAAAAATTCCATTAGCT---GAGACTTAGTTTCTTCAG-AATGTGATACAATACAATCCCTAATGAGCCAAAATTTAACTTACTGCCACCAATAAATGAGAGGTACTT-ACTGAGCTAATAAAACATACTA-------------------------------AGTTAAGAATTTTTAAGAACTGTATAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGATTTCTTCATCAAACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTATGATTATCACTTTTCCCTTTACAATATTACT-TCAGACATCAGAGGAAGGCGGGTGTGAATATGTGGGGATGAG-----GGGCGTGCATCCTTGCATGTGCTCTATGTACTTCGATTTCACTGTTGTGTGGTACCTCATGGTGCTGCTCTATTGATAAAAGAAACTTTTGGAAGAC-------ATGCACAACTACCGAGTAGATTAAGCTGGAAAAGTTGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGCTATTTTCTGTGTTTCCGTCAAAACCGCCCTGCTATTGATAAAGGGCG-TTTTGGAGGACCCAAGAAAACCACGAGGTTTTCATTTAGGATCATAATTATCCTTGATGAAAATTATCATGCTTTTGAAGACCTGCCTTAGACAAACAAA-------------------------AC--ACAT-----TAAAAA--AA-AAA---------AACAGTACATTATGGTAGCTTGATGTGTAACATgcatttgattgagaacta----gaatactaggtacactaaagttttaaaagttcagaaaaggaaaggactaat-gaaagtaccagagaaatttttatggaagagAGAG------------------------------AGAGAATAGGTTCATTGGGTGTGAGAAAGTGACTTGGTCATAGAATAAACACTAAATTTTTCAAAGTCTT-AAGTATTCTGTATTTGAGAGTAATATTATTAAGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5364719 1190 + 17472758 AATACATTTGA-TTTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAATTAAGAATTAACCTGGACAAATGATAGTTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGGGGTTACTTGATATAAGTTAAACAAAGAGAATTGAAATATATTTATTTCATGGTTACAAAGACTATCACACTAAAATATAGTTACATACTGGATGAT----TATGTATGTG----ACTGTGCAAAGGAGCA-TTTTAA----TTATACTAAAAAATTCCGTTAGCT---GAGACTTAGCTTCTTCAG-AATGTCATACAATACAATCCCTAATGAGCCAAAATTTAACTTACTGCCACCAATAAATGAGAGGTACTT-ACTGAGCTAATAAAACATACTA-------------------------------AGTTAAGAATTTTTAAGAACTATATAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGATTTCTTCATCAAACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTATGATTATCACTTTTCCCTTTACAATATTACT-TCAGACATCAGAGGAAAGTGGGTGTGAATATGTGGGGATGAG-----GGGCGTGCATCCTTGCATGTGCTCTATGTACTTCGATTTCACTGTTGTGTGGTACCTCATGGTGCTGCTCTATTGATAAAAGAAACTTTTGGAGGAC-------ATGAACAACTACTGAGTAGATTAAGCCTGAAAAATTGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGACAGAAGCTATTTTCTGTGTTTCCGTCAAAACCGCCCTGCTATTGATAAAGGGCA-TTTTGGAGGACCCAAGAAAACCACGAGGTTTTCATTTAGGATCATATTTATCCTTGATGAAAATTATCATGCTTTTGAAGACCCGCCTTAGACaaacaaa-------------------------ac--acat-----taaaaa--aa-aaaacaaa----acCAGTACATTATGGTAGCTTGATGTGTAACATGCTTTTGATTGAGAACTA----GAATACTAGCTACACTAAATTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTACCAGAGAAATTTTTAT-GAAGAGAGAG------------------------------AGAGAATAGGTTCATTGGGTGTGAGAAAGTGACTTGGTCATAGAATAAACACTAAATTTTTCAAAGTTTT-AAGTATTCTGTATTTGAGAGTAA---TATTAAGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139404882 1198 - 152096393 AATACATTTGA-TTTTATCTCAGTTTCTCAACCAAAAATGTGCAAAAATTAAGAATTAACCTAGACAAATGATAGTTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGGGGTTATTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACAAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTG----ACTGTGCCAAAGAGCA-TTTTAA----TTATACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATATGATACAATATGACCCTTAATGAGCCAAAATTTAACTTACTGCCACCAATAAATAAGAGGCACTT-ACTGAGCTAGTAAAACATATTA-------------------------------AGTTAAGAATTTTTAAGAATTATATAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGATCTCTTCATCAAACATCAAAATTTCTTAACCTAGTTCAAATTACTGCTATGATTATCACTTTTCCCTTCACAGTATTACT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGGG-----GGGCGTGCATCCTTGCATGTGCTCTGTGTACTTCGATTTCACTGTTGTGTGGTACCACATGGTGCTGCTCTGTTGATAAAAGAAACTTTTGGAGGAC-------ACGCACAACTACTGAGTAGATTAAGCTGGAAAAATTGAACTGTAGATTCCTCTAAAGCATATTTGCATAAAGACAATTGGCCTGAGAGAAGCTATTTTCTGTGTTTCCGTCAAAACTGCCCTGCTATTGATAAAGGGGG-TTTTGGAGGACCCAAGAAGACCACGAGGTTTTCATCTAGGATCATAATTATCCTTGATGAAAATTATCATGCTTTTGAAGACATGCCTTAGACaaacaaa-------------------------ac--acat-----taaaaa--aa-aaaaaaaaaaaCGCCAGTACATTATGGTACCTTAATGTGTAACATGCACTTGATTGAGAAGTA----GAATACTATCTACACTAAATTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTACCAGAGAAATTTTTATGGAAGAGAGAG------------------------------AGAGAATAGGTTCATTGGGTATGAGAAAGTGACTTGGTCATAGAATAAACACTAAATTTTTCAAAGTTTT-AAGTATTCTGTATTTGAGAGTAATATTATTAAGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57354093 1179 + 70235451 AATACATTTGA-ATTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAACTAAGAATTAACCTGGACAAATGATAGCTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGCGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACAAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTACACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAATAAGAGGCACTT-ACTGAGTTAGTAAAACCTA------------------------------------TTAAGAATTTTTAAGAACTATTCAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGAA--CTTCATCAGACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTGTACTTCGATCTCACTGTTGTGTGGTACCACATGGTGCTACTCTATTGAGAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACTGAGTGGATTAAGCTGGAAAAAATGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGTGATTTTCTGTGTTTCTGTCAGAACCACCCTGCTCTTGATAAAAGGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATT-TCATGCTTTTGAAGACCTGCCTTGGACAAAGAAA-------------------------AC--ACAT-----TTAAAA--AA-ACC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGATTGAGAAGTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTATCAGAGAAATATTTACAGAAGAGAGAG------------------------------ACAGAATAGGTTTATTGGGTGTGAGAAAGTGACTTGGTCGTAGAATAGATACTGAATTTTTCAAAGTTTT-AAGTATTT-------GAGAGTAATATCATTAAGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63045488 1179 - 75711847 AATACATTTGA-ATTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAACTAAGAATTAACCTGGACAAATGATAGCTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGCGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACGAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTACACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAATAAGAGGCACTT-ACTGAGTTAGTAAAACCTA------------------------------------TTAAGAATTTTTAAGAACTATTCAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGAA--CTTCATCAGACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTGTACTTCGATCTCACTGTTGTGTGGTACCACATGGTGCTACTCTATTGAGAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACTGAGTGGATTAAGCTGGAAAAAATGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGTGATTTTCTGTGTTTCTGTCAGAACCACCCTGCTCTTGATAAAAGGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATT-TCATGCTTTTGAAGACCTGCCTTGGACAAAGAAA-------------------------AC--ACAT-----AAAAAA--AA-CCC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGATTGAGAAGTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTATCAGAGAAATATTTACAGAAGAGAGAG------------------------------ACAGAATAGGTTTATTGGGTGTGAGAAAGTGACTTGGTCGTAGAATAGACACTGAATTTTTCAAAGTTTT-AAGTATTT-------GAGAGTAATATCATTAAGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13598237 1179 - 18804593 AATACATTTGA-ATTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAACTAAGAATTAACCTGGACAAATGATAGCTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGCGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACGAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTACACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAAAAAGAGGCACTT-ACTGAGTTAGTAAAACCTA------------------------------------TTAAGAATTTTTCAGAACTATTCAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGAA--CTTCATCAGACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTGTACTTCGATCTCACTGTTGTGTGGTACCACATGGTGCTACTCTATTGAGAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACTGAGTGGATTAAGCTGGAAAAAATGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGTGATTTTCTGTGTTTCTGTCAGAACCACCCTGCTCTTGATAAAAGGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATT-TCATGCTTTTGAAGACCTGCCTTGGACAAAGAAA-------------------------AC--ACAT-----AAAAAA--AC-CCC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGATTGAGAAGTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTATCAGAGAAATATTTACAGAAGAGAGAG------------------------------ACAGAATAGGTTTATTGGGTGTGAGAAAGTGACTTGGTCGTAGAATAGACACTGAATTTTTCAAAGTTTT-AAGTATTT-------GAGAGTAATATCATTAAGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13214963 1180 + 18905526 AATACATTTGA-ATTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAACTAAGAATTAACCTGGACAAATGATAGCTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGCGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACGAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTACACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATATGATACAATACAATCCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAATAAGAGGAACTT-ACTGAGTTAGTAAAACCTA------------------------------------TTAAGAATTTTTAAGAACTATTCAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGAA--CTTCATCAGGCATCAAAATTGCTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTGTACTTCGATCTCACTGTTGTGTGGTACCACATGGTGCTACTCTATTGAGAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACTGAGTGGATTAAGCTGGAAAAAATGAACTGTAGATTCCTCTAAAGCACATTTGCATAAAGACAATTGGCCTGAGAGAAGTGATTTTCTGTGTTTCTGTCAGAACCACCCTGCTCTTGATAAAAGGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATC-TCATGCTTTTGAAGACCTGCCTTGGACAAAGAAA-------------------------AC--ACAT-----AAAAAA--AACCCC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGATTGAGAACTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTATCAGAGAAACATTTACGGAAGAGAGAG------------------------------ACAGAATAGGTTTATTGGGTGTGAGAAAGTGACTTGGTCGTAGAATAGACACTGAATTTTTCAAAGTTTT-AAGTATTT-------GAGAGTAATATCATTAAGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60044790 1190 - 72318688 AATACATTTGA-ATTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAACTAAGAATCAACCTGGACAAATGATAGTTAAAAGTTCAAGAGAAATATTATAACAA-TTTTGGCAGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATACATTTATTTCATTGTTACAAAGGCTATCACATTAAAATACAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTATACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAATAAGACGCACTT-ACTGAGTTAGTAAAACCTA------------------------------------TTAAGAATTTTTAAGAACTATTCAACTTCAACGTTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATATAAAATCCTCATTACAGAACTCTTCATCAGACATCAAAATTGTTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAAAATGTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTGTACTTTGATCTCACTGTTGTGTGGTACCACATGGTGCTGCTCTATTGATAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACCGAGTGGATTAAGCTGGAAAAATTGAACTGTAGATTTCCCTAAAGCACGTTTGCATAAAGACAACTGGCCTGAGAGAAGTGATTTTCTGTGTTTCCGTCAGAACTGCCCTGCTGTTGATAAAAAGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATT-TCATGCTTTTGAAGACCTGTCTTGGACAAAGAAA-------------------------AC--ACATTAAAAAAAAAA--AA-ACC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGATTGAGAACTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAACGACTAATGGAAAGTATCAGAGAAACCTTTATGGAAGACAG----------------------------------AGAATAGGTTTATTGGGTGTGAGAAAATGACTTGGTCATAGAACAGACACTGAATTTTTCAAAGTTTT-AAGTATTCTGTATTGGAGAGTAATATCATTAAGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 378394 1180 - 1517660 AATACATTTGA-ATTTATCTGAGTTGCTCAACCAAAAATGTGCAAAAACTAAGAATTAACCTGGACAAATGATAGCTAAAAGTTCAAGAGAAATATTATAACCA-TTTTGGCGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTGTTACGAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTACACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATCCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAATAAGAGGCACTT-ACTGAGTTAGTAAAACCTA------------------------------------TTAAGAATTTTTAAGAACTATTCAAATTCAACATTTAGGACATACA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGAA--CTTCATCAGACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAATATGTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTGTACTTCGATCTCACTGTTGTGTGGTACCACACGGTGCTACTCTATTGAGAAAAGAAACTTTTGGAGGAC-------ATGCACAACTACTGAATGGATTAAGCTGGAAAAAATGAACTGTAGATTCCTCTAAAGCACATTTGCAAAAAGACAACTGGCCTGAGAGAAGTGATTTTCTGTGTTTCCGTCAGAACCACCCTGCTCTTGATAAAAGGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATC-TCATGCTTTTGAAGACCTGCCTTGGACAAAGAAA-------------------------AC--ACATT----AAAAAA--AC-CTC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGACTGAGAACTA----GAATACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTATCAGAGAAATATTTACGGAAGAGAGAG------------------------------ACAGAATAGGTTTATTGGGTGTGAGAAAGTGACTTGGTCGTAGAATAGACACTGAATTTTTCAAAGTTTT-AAGTATTT-------GAGAGTAATATCATTAAGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3478711 1192 + 6513552 AATACATTTGA-ATTTATCTCAGTTGCTCAACCAAAAGTGTGCAAAAACTAAGAATTAACCTGGA-AAATGATAGCTAAAAGCTCAAGAGAAACGTTATAACCA-TTTTGGCGGTTACTTGATATAAGTTAAATAAAGAGAATTGAAATATATTTATTTCATTTTTACGAAGGCTATCACATTAAAATATAGTTACATACTGGATAAT----TATGTATGTGACTAACTGTGCCAAAGAGCA-TTTTAA----TTATACTAAAAAATTCCATTAGCT---GAGACTTAGCTTCTTCAG-AATGTGATACAATACAATTCCTAATAAGCCAAAATTTAACTTACTGCCACCAATAAATAAGAGGCACTT-ACTGAGTTAGTAAAGCCTA------------------------------------TTAAGAATTTTTAAGAACTATTCAAATTCAACATTTAGGACATACA-CTTTTAACATAAGCAAACACTGATTATACTGGTGATGTAAAATCCTCATTACAGAATGCTTCATCAGACATCAAAATTGCTTAACCTAGTTCAAATTACTGCTAAGATTATCACTTTTCCCTTCACAATATTCCT-TCAGACATCAGAGGAAAGCAGGTGTGAATATTTGGGGATGAG-----GGGCATGCATCCTTGCATGTGCTCTGTATACTTCCATCTCACTGTTGTGTGGTACCACATTGTGGTGCTCTATTGATAAAAGAAACTTTTGGAGGAC-------ACGCACAACTACTGAGTGGATTAAGCTGGAAAAATTGAACTGTAGATTCCTCTAAAGCACGTTTGCATAAAGACAATTGGCCTGAGATAAGTTATTTTCTGTGTTTCCATCAAAACCACCCTGCTGTTGATAAAAGGAGATTTTGGAGGACCCAAGAAAACCACAAGGTTTTCATCCAGGATCATAGTTATCCTTGATGAAAATT-TCATGCTTTTGAAGACCTGCCTTGGACAAAGAAA-------------------------AC--AAATT----AAAAAA--AA-AAC---------ACCAGTACCTTATAGTACCTTGATGTGTAACATGCATTTGATTGAGAATTACTAGCTACACTAGCTACACTAAAGTTTTAAAAGTTCAGAAAAGGAAAGGACTAAT-GAAAGTATCAGAGAAATATTTATGGAAGAGAGAG------------------------------AGGGAATAGGTTTATTGGATATGAGAAAGTGACTTGGTCATAGAATAGACACTGAGTTTTTCAAAGTTTT-AAGTATTCTGTATTTGAGAATAATATCATTAAGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105241806 1156 + 117903854 AATACATCTGA-TTTTATCTCAGTTGCTCAAC----------CAAAAATTAAGAATTAACCTGGATAAATAATAGTTAAAAGTTCAAGAGAAATATTAAAATCA--TTTTTTAGTTACTTGATATAAGCTAAATAAAGAGAATTGAAATACATTTATTTCATTGTTACAAAGGCTATCAAATTAAGCTATAGTTACATACTGGATAATTGAGTATGTATGTGACTAACTGTGCCAAAGAGCATTTTTAA----TTACACTAAAAAATTCTATTAGCT---GAGACTTAACTTCTTCAG-AATGT-ATACAATACAATCCCTAATGAGTC-------AACGTACTGCCACTAGTAAATAAGAGGCACTTGACTGAGCTAG-TAAAAAGA-------------------------------------TAAGAATTTTTAAGAACTATGTAAATTCAACATTTAGGACATACA-ATTTTAACATTAGCAATCACTGATTATACTGGTGACGTAAAATTCTCAATATAGATCTCTTCATTGAACATCAAAATTGCTTAACCTAGTTGAAATTACAGCTATGATTATCACTTTTCCCTTCACAGTATTACT-TTAGACATCAGCGGAAAGCAGGTGAGAATATGTGGGGACAAG-----AGGCATGCGTCCTTGCATGTGCTCTACGTACCTCAATTTCACTGTTGTATGGAACCATGTGGTGCTGCTCAATTGATAAAAGAAACTATTTGAGGAC-------ACACACAACTACTGAGTAGATGAAGCTAGAAAAATTGAACTGTAGATTCCTCTAAAGCAAGTTTACATGAAGACAATTGGCCTGATAAAAGTTATTTTCTGTGTTTCCATCAAAACCACGCAGTTATTGATAAAAGGAAATTTTTGAGGACCAAAGAAAACCACAGGGTTTTTGTCTAGGATCATAATTACCTTGGATGAAAATTATCATGCTTTTGAAGACCTGCCTTGGGCAAACAAA-------------------------ACTTATGT-----TATAAA--AA---C---------ACCAGTACATTATGTTACCTTGATGTGTAACATGCATTTGATTCAGAATTA----GAATACTAGCCACACTAAATTTTT-AAAGTTCAGTAAAGGAAAGGACTAAT-GA--GTATCAGATAAGTATTTATGAAAGAGAGAGAG----------------------------AGAGAATAGGTATATTGGGTGTGAGAAAGTGACTTGGTACTAGAATAAACACTAAGTTTTT---------------TTCTGTATTTGAGAACAA---TATTAAGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19435096 1211 - 31320352 AATACATTTAA-TTTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAATTAAGAATTAACCTGGACAAATAATAGTTAAAAGTTCAAGAGAAATATAATAATCATTTTTTTTAGTTACTTGATATAAGCTAAATAAAGAGAACTGAAATACATTTATTTCATTGTAACAAAGGCTATCAAATTAAACTATAGTTACGTACTGGATAATTGAATATGTATGTTACTAAATGTGCCAAAGAGCATTTTAAA----TTATACTAAAAAATTCTATTAGCT---GAGACTTAACTTCTTTAG-AATGTGATACAATACAATCCCTAATCAGCC-------AACTTACTGCCACCAGTAAATAAGAGGTACTT-ACTGAGCTAGTTAAAAATA-------------------------------------TAAGAATTTTTAAGAACTATGTAAATTCAAGATTTAGGACATACA-ACTTTAACATTAGCAAACACTGATTATACTGGTGATGTAAAATTCTCAATATAGATCTCTTCATTAAACATAAATATTGCTTAACCTAGTTGAAATTACAGCTATGATTATCACTTTTCCCTTTACAGTATTACT-TCAGACATCAGAGGAAAGCAGGTGAGAATATGTGGGGACCAG-----GGGCACGCATCCTTGCATGTGCTCTGTGTACTTCTATTTCACCTTTGTATGGTACCACGTGGTGCTGCTCTATTGATAAAGGAAACTTTTTGAGGAC-------AGAAACAACTATTGAGTAGATTAAGCTGGAAAAATTGAACTGTAGATTCCTCTAAAGCAAATTGTCATGAAGACAATTCGCCTCATAAAAGTTATTTTCTGTATTTCCATCAAAACCAAGCAGTTATTGATAAAAAGAGATTTTTGAGGAACAAAGAAAACCACAAGGTTTTCGTCTAGGATCATAATTATCTTGGATGAAAATTACCATGCTTTTGAAGACCTGCCTTGGACAAACAAA-------------------------AC--ACAT-----TATAAA--AA---C---------ATCAGTATATTATGGTACCCTGATGTGTAACATGCATTTGATTCAGAATTA----GAATACCAGCTACACTAAATTTTT-AAAGTTCAGAAAAGGAAAGGACTAAT-GAATGTATCAGAGAAATATTTATGGAagagagagagagagagagagagagagagagagagagaaagagaATAGGTATATTGGGTGTGAGAAAGTGACTTGGTCCTAGAATAAAGACAAAATTTTTCAAAGTTTT-AAGTATTCTGTATTTGAGAGCAA---TATTAAGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1630208 1185 + 2203405 AATACATTTGA-TTTTATCTCAGTTGCTCAGCCAAAAATGTGCAAAAATTAAGAATTAACCTGGACAAATAATAGTTAAAAGTTCAAGAGAAATATAATAATCA-TTTTTTCAGGTACTTGATATAAGCTAAATAAAGAGAATTGAAATACATTTATTTCATTGTTACAAAGGCTATCATATTAAACTATAGTTACATACTGGATAATTGAGTATGTATGTGACTAACTGTGCCAAAGAGCATTTTTAA----TTATACTAAAAAATTCTATTAGCT---GAGAGTTAACTTCTTCAG-AATGTGATACAATACAATCCCTAATGAGCC-------AACTTACTGCCACCAGTAAATAAGAGGCACTT-ACTGAGCTAGTAAAAAATA-------------------------------------TAAGAATTTTTAAGAACTATGTAAATTCAAGATTTAGGACATACA-ATTTTAACATTAGCAAACACTGATTATACTGGTGATGTAAAATTCTCAATATAGATCTCTTCATTAAACATCAAAATTGCTTAACCTAGTTGAAATTACAGCTATGATTATCACTTTTCCCTTCACAGTATTACT-TCAGACATCAGAGGAAAGCAGGTGAGAACACGTGGGGACGAA-----GGGCATGCATCCTTGCATGTGCTCTATGTGCTTCAGTTTTACTTTTGTAGGGTACCACGTGGTGCTGCTCTATTGATAAAAGAAA-TTTTTGAGGAC-------ACACACAACTACTGAGTACATTAAGCTGGAAAAATTGAACTGTAGATTCCTCTAAACCAAATTTACATGAAGACAATTGGCCTCATAAAAGTTATTTTCTGTGTTTCCATCAAAACCACACAGTTATTGATAAAAGGAGATTTTTGAGGACCAAAGAAAACCACAAGGTTTTTGCCTAGGATCATAATTATCTAGGATGAAAATTACCATGCTTTTGAAGACCTGCCTTGGACAAACAAA-------------------------AC--ACAT-----TATAAA--AA---C---------ACCAGTATATTATGGCACCTTGATGTGTAACATGCATTTGATTCAGAATTA----GAATACCAGCTACATTAAATTTTT-AAAGTTCAGAAAAGGAAAGGACTAAT-GAATGTATCAGAGAAATATTTATGGAagagagagagagag------------------------agaCAATAGGTATATACGGTGTGAGAAAGTGACTTGGTCCTAGAATAAACACTATATTTTTCAAAGTTTT-AAGTATTCTATATTTGAGAGCAA---TATTAAGC i cebCap1.NW_016107689v1 I 7 C 0 s aotNan1.NW_018502140v1 3582413 1186 - 14941987 AATACATTTGA-TTTTATCTCAGTTGCTCAACCAAAAATGTGCAAAAATTAAGAATTAACCTGGACAAATAATAGTTAAAAGTTCAAGAGAAATATTACAATCA-TTTTTTTAGTTACTTGATATAAGCTAAATAAAGAGAATTGAAATACATTTATTTCATTGTTACAAATGCTATCAAATTAAACTATAGTTACATACTGGATAATTGAGTATGTATGTGAC----TGTGCCAAAGAGCAATTTTAA----TTATACTAAAAAATTCTATTAGCT---GAGACTTAACTTCTTCAG-AATGTGATACAATACAATCCCTAATGAGCC-------AACTTACTGCCACCAGTAAATAAGAGGCACTT-ACTGAGCTAGTAAAAAATA-------------------------------------TAAGAATTTTTAAGAACTATGTAAATTCAACATTTAGGACATACA-ATTTTAACATTAGCAAACACTGAGTATACTGGTGATGTAAAATTCTCAATATAGATCTCTTCATTAAACATCAAAATTGCTTAAGCTAGTTGAAATTACAGCTATGATTATCACTTTTCCCTTCACAGTATTACT-TCAGACATCAGAGGAAAGCAGGTGAGAATATGTGGGGACGAG-----GGGCATGCATCCTTGCATGTGCTCTATGTACTTCGATTTCACTGTTGTATGGTACCACATGGTGCTGCTCTATTGATAAAAGAAACTTTTTGAGGAC-------ACACACAACTACTGAGTAGATTAAGCTGGAAAAATTGAACTGTAGATTCCCCTAAAGCAAGTTTACATGAAGACAATTGGCCTGATAAAGGTTATTTTCTGTGTTTCCATCAAAACCATGCAGTTATTGATAAAAGGATATTTTTGAGGACCAAAGAAAACCACAAGGTTTTCGTCTAGGATCATAATTATCTTGGATAAAAATTACCATGCTTTTGAAGACCTGCCTTGGACAAACAAA-------------------------ACACATGT-----TATAAA--AA---C---------ACCAGTACATTATGGTACCTTGATGTGTAACATGCATTTGATACAGGATTA----GAATACTAGCTACACTAAATTTTT-AAAGTTAAGAAAAGGAAAGGACTAAT-GAATGTATCAGAGAAATATTTATGGAagagagagagagagag----------------------agagaATAGGTATATTGGGTGTGAGAAAGTGACTTGGTCCTAGAATAAACACTAAATTTTTCAAAGTTTT-AAGTATTCTGTATTTGAGAACAA---TATTAAGC i aotNan1.NW_018502140v1 I 5 C 0 s otoGar3.GL873546 11223786 1134 - 20685099 TATAGATT-----TTTATCTCAGTTGCTCAGCCACCAATATGCAAAAGTCAAGAAATGACCTAGACCAAGAATCTTTGTAATTTTAAGACAAAGGTAAAGATCA-TTTCTGGTGATACTTAATGTAGCTT----AAAGAGCATTTCAATATACTTATTTCATTGTTACAAAGATTATCACACTAATGTATGGTTACATGCTAGACAATTAATTATGCGTGTGACT-ACTCAGCCAAAGACTG-TTGTAAA-TGATAAACAAATACGTTTCATTAGCT---GAGACTTAACTTCTTCAG--ATATGATACCGTATAATCCTTAACCAGCTAAAAATTAACATATTGCCACCAGTAA---AGAGAAACTT-ACCGAGCTAGTCAAAAACATTA------------------------------TAAAAAAGGATTTTTAAGAACTAGAAAAATTCAACATCTAGGATGCACAGATCTCAACATAAGCAAACACTGATTACACTGGTGATTTAAAATCCTCATTACACGCCTCTTCATCAAGCATCAAAATCGCTTAACCTAGTTCGGATTATCACCATGGCTGCCACTTTTCCTTTCAGGATGTCACT-CCCAGTATCAGAGGAA-GCAGGTGGGAATGTGGTGGGGCTGG-----GAGTA----------------------GTGCTCCAATTCCATT-CTGTGT-GTACCAGATGATCCT-CTTTATTGATAAAGGGAG-TTTGGGAGGACCACAGAAAACCACAACTAATGAATAGTTTAAGCTTGAAAAAGTGAACCATAGATTGC----AATCACTTTTACATAAAGACACTGACATAAAGATAAGTTATTTTCTGTGTGTCAATCAAAACTAC-----------------------------------------CTGCTAGGT----------GACTGTTATTATGCTAAGCGAAAATTATTA---TTTTAAAGAACTTCAAGGAAGAAAAAGAAATACAAAACAAACTACACATACACAC--ACAT-----TTAAAA--AT---A---------AGAAATATTTTATGATCCCTTAACCTATAACATGCATTTG----AGAACGA----AAAGACTTACTACGCTAAATTTTTACCAGTTCAAAAAAAGAGAGGATCAAT-AGATAAAAAAGGGAAATATTTATAGAAAAAAGAGACAAAC------------------------AGAGAATGGGGATGTAGACTGTGAGAAAGTGACTTCCTCCTCGGAGACGGCTGAAATATTGAAAAGTTGT-TAGGATTCTGTATTTGAGAGTAA---TATTAAGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112293086 1151 - 122678785 ---ATATGTGATTTTTATTTGATTTGCTCAACCACAAATGTAGAAAAGTTAAGAAT----CCAGAAAAGTAATAGTTA-GATTTCAAGAGAAATACAATTATAA-TTTTAAGAGTTACCAGATATGAGTT-----AAGAGAATTATAATGTATTTATTTCATTGTAA-AAAGGCTAGCACTTTGACTTGTGGTTATATACTAGATATCTGATGATGTATGTGACTACTCATGCTAAAGAGTATTCCTAAACTTATAAACAAACAAATTCCAATAGCTCAGAAGACTCAACTTCTTCAGAAATGTAATGCAGTACAAACCTT----GGCCAAAATTTAATTCACTACAACCAGTACACCAGAGGCACTT-ACTGAGCTCATGAaaaacaaaacaaaacaaaacaaaacaaaaATAATAAACACAAAAAATAACTTTCAGGAACTAT--AAATTCAGTGCCTAAGACATAGA-ATTTTAACATAAGCAAACACTGATTATACTGGTGATTTGAAATCCTCATTACAGATGCCTTCATCAAGCATCAAAATTGCTTAACCTAGTTCAAATTACTACTATGGTTTCCACTTTTCCCTTCAAAATGTCACTCCCAAAGAGCAGAGGAAAGTAGATGTTGACTAGGAGGAGGGAGTATAAGGGAATGCTTTC-TGCATGTGCTCTACGAAGTTTGATTTTACTGTTGGGTGCTACCAGATGGTGCTCCTTTCTGGAAAAAAAG----TTTGGAGGAGCAATAGAAACCACAACCAATGAGCGGATTAGG-TGGGGAAAGTGGACCATAAGTT--------GCATGTTTACATAAATACAGCTGGCATGAAATAAGTTATTTTCTCTG--TCCATCAAAACTGTCCTGCT--------------------------------------------------CCATGATCATTATTATCCTAGAGGAAAATTGCCATGCTTTTACGCACTTGCCTTGAAGAGAGGGA-AAAGGAAATAAGC-----------AC--ACAT-----TAAAAAATAA-AAT---------ACAAATACATTGTATTACCTAAATGCGC-------------------ATTG-----------ACCTACACTAAATTTTTAGATATTCAGAAAGAGAACCAATCAGA-AAAA-----AAAAATATATTTATGGAAAAGAAAG------------------------------AGAGAATGGGTATGTTGGATGTCCAAAAATGACTTGGTCCTTGAATAAAGACTAAGTCTTGAAAAGATGTAAAGTATTCTGTCCTTAAAATTAATAATATTAAGC i canFam3.chr1 C 0 I 189 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=685008.000000 s hg38.chr18_GL383571v1_alt 117265 66 + 198278 TTAATTTACATATTTTATTTTTTAACTTTCTAAGTAATTTAGATTGGCCTTGCTCAATAA-TTTCTC s panTro5.chr18 65027297 66 + 78221452 TTAATTTACATATTTTATTTTTTAACTTTCTAAGTAATTTAGATTGGCCTTGCTCAATAA-TTTATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64146398 66 + 77229886 TTAATTTACATATTTTATTTTTTAACTTTCTAAGTAATTTAGATTGGCCTTGCTCAATAA-TTTCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5365909 66 + 17472758 TTAATTTACATATTTTATTTTTTAACTTTCTAAGTAATTCAGATTGGCCTTGCTCAATAA-TTTCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139406080 66 - 152096393 TTAATTTACATATTTTATTTTTTAACTTTCTAAGTAATTTAGATTGGCCTTGCTCAATAA-TTTCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57355272 66 + 70235451 TTAATTTACATATTTCTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGTTCAATAA-TTTCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63046667 66 - 75711847 TTAATTTACATATTTCTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGTTCAATAA-TTTCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13599416 66 - 18804593 TTAATTTACATATTTCTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGTTCAATAA-TTTCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13216143 66 + 18905526 TTAATTTACATATTTCTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGTTCAATAA-TTTCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60045980 66 - 72318688 TTAATTTACATATTTTTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGCTCAATAA-TTTCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 379574 66 - 1517660 TTAATTTACATATTTCTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGTTCAATAA-TTTCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3479903 67 + 6513552 TTAATCTACATATTTTTATTTTTAACTTTCTAAGTAATTTAGATTGGCATTGTTCAATAATTTTCTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105242962 65 + 117903854 TTGACTTACATATTTTATTTTTTAAC-TTCTTAGTAATTTAGATCGCCCTTGCTCAGTAA-TTTCTC i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19436307 65 - 31320352 TTGACTTACATATTTTATTTTTTAAC-TTCTTAGTAATTTAGATTGGCCTTGCTCAATAA-TTTCTC i saiBol1.JH378121 C 0 I 5 s cebCap1.NW_016107689v1 1631393 65 + 2203405 TTGACTTACATATTTTATTTTTTAAC-TTCTTAGTAATTTAGATTGGCCTTGCTCAATAA-TTTCTC i cebCap1.NW_016107689v1 C 0 I 5 s aotNan1.NW_018502140v1 3583599 65 - 14941987 TTGACTTACATATTTTATTTTTTAAC-TTCTTAGTAATTTAGATTGGCCTTGCTCAATAA-TTTCTC i aotNan1.NW_018502140v1 C 0 I 20 s otoGar3.GL873546 11224920 57 - 20685099 CTCATTTAACaatattatatttttaatttctaaataatttaGATCAGCTT---------G-TTCCTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112294426 65 - 122678785 TTAACTTG-ACATTTTATGTTTTTACTTTCTAAGTGACTTAGACTGGCTCTCCTTCATAA-TTTCCC i canFam3.chr1 I 189 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=294108.000000 s hg38.chr18_GL383571v1_alt 117331 34 + 198278 CAAATATATGTATAGGAATCCTGTCATTTTAAGA s panTro5.chr18 65027363 34 + 78221452 CAAATATATGTATAGGAATCCTGTCATTTTAAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64146464 34 + 77229886 CAAATATATGTATAGGAATCCTGTCATTTTAAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5365975 34 + 17472758 CGAATATATGTATAGGAATCCTGTCATTTTAAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139406146 34 - 152096393 CAAATATATGTATAGGAATCCTGTCATTTTAAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57355338 34 + 70235451 CAAATACATGTATAGGAATCCTGTCATTTTAAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63046733 34 - 75711847 CAAATACATGTATAGGAATCCTGTCATTTTAAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13599482 34 - 18804593 CAAATACATGTATAGGAATCCTGTCATTTTAAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13216209 34 + 18905526 CAAATACATGTATAGGAATCCTGTCATTTTAAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60046046 34 - 72318688 CAAATATATGTATAGGAATTCTGTTATTTTAAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 379640 34 - 1517660 CAAATACATGTATAGGAATCCTGTCATTTTAAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3479970 34 + 6513552 CAAATATATGTATAGGAATCCTGTCATTTTAAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105243032 33 + 117903854 TAATGACA-GTATAGGATTCCTGTCATTTTAAGA i calJac3.chr13 I 5 C 0 s saiBol1.JH378121 19436377 28 - 31320352 TAATCACA-GTATAGGATTCCTGTCATTT----- i saiBol1.JH378121 I 5 C 0 s cebCap1.NW_016107689v1 1631463 33 + 2203405 TAATGACA-GTGTAGGATTCCTGTCATTTTAAGA i cebCap1.NW_016107689v1 I 5 C 0 s otoGar3.GL873546 11224977 30 - 20685099 CAAATATGTGTTTAGGAAACATGTCATTTT---- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112294491 30 - 122678785 CAAATACGTGTACACGGAACCTGCCATTTT---- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e aotNan1.NW_018502140v1 3583664 20 - 14941987 I a score=8794458.000000 s hg38.chr18_GL383571v1_alt 117365 870 + 198278 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAACTAGTATTGGTGAAATTA----TTTCAATGTGTATATTAATAGCTATTGCCTTATTAAACTATATAT----A-AAAGTGAATATATATATTGAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATGGAAAAGcac-------tatttaatgtgttctttgtatcagccatatttagaataaaaatgcaaggtagatattagtattgccattttacagatgaggaaactatggctcagaatggttaagtgacttgtcccaagtcacact----acaaataggcccaactgtgggccttaggagtcagacattcctaaattttaata-ccgtgtatttcctctacacGGT---TCTCTAAAATTACCTACAGTAACATGAAATGCACAGCTCTTCCATGTTAACCACGGTCTTTCTGCTCTCATAGATACTGTAGTATAATAACTCCCAGTTTACCCACAAGACTT-CCCACCAGACTATGAATCCCTT-AAGTCTTCCCTGAAATCTATTCCTGGTATACAGAGTTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAAGCCCCATATtgtagtgaat----ggaaacttgactgtggtatgagatcagcttgattga------------gc------------ctgccactcaccagctttatgacttagtataagttatttagatttt-tgaggc---------act---------ctcctactttttgaaaacaga----------atgccttgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttatgcacaTAAATGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGCAAAAGACCTGAAATAGGCAGAA s panTro5.chr18 65027397 870 + 78221452 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAACTAGTATTGGCGAAATTA----TTTCAATGTGTATATTAATAGCTATTGCCTTATTAAACTATATAT----A-AAAGTGAATATATATATTGAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATGGAAAAGCAA-------TATTTAATGTGTTCTTTGTATCAGCCATATTTAGAATAAAAAtgcaaggtagatattagtattgccattttacagatgaggaaactatggctcagaatggttaagtgacttgtcccaagtcacact----acaaataggcccaactgtgggccttaggagtcagacattcctaaattttaata-ccgtgtatttcctctacacAGT---TCTCTAAAATTACCTACAGTAACATGAAATGCACAGCTCTTCCATGTTAACCACGGTCTTTCTGCTCTCATAGATACTGTAGTATAATAACTCCCAGTTTACCCACAAGACTT-CCCACCAGACTGTGAATCCCTT-AAGTCTTCCCTGAAATCTATTCCTGGTATACAGAGTTTCAATAAATATTGTAATTATGGTTATTTAAAAAAATAAAGCCTCATATtgtagtgaat----ggaaacttgactgtggtatgagatcagcttgattga------------gc------------ctgccactcaccagctttatgacttagtataagttatttagatttt-tgatgc---------act---------ctcctaatttttgaaaacaga----------atgccttgccgaatttaggaagtttaaatcatttaatgtaagcaagacgttatgcacaTAAATGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGCAAAAGACCTGAAGTAGGCAGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64146498 869 + 77229886 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAACTAGTATTGGCGAAATTA----TTTCAATGTGTATATTAATAGCTATTGCCTTATTAAACTATATAT----A-AAAGTGAATATATATATTGAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATGGAAAAGcac-------tatttaatgtgttctttgtatcagccatatttagaataaaaatgcaaggtagatattagtattgccattttatagatgaggaaactatggctcagaatggttaagtgacttgtcccaagtcacact----acaaataggcccaactgtgggccttaggagtcagacattcctaaattttaata-ccgtgtatttcctctacacAGT---TCTCTAAAATTACCTACAGTAACATGAAATGCACAGCTCTTCCATGTTAACCACGGTCTTTCTGCTCTCATAGATACTGTAGTATAATAACTCCCAGTTTACCCACAAGACTT-CCCACCAGACTATGAATCCCTT-AAGTCTTCCCTGAAATCTATTCCTGGTATACAGAGTTTCAATAAATATTGTAATGATGGTTATTT-AAAAAATAAAGCCCCATATtgtagtgaat----ggaaacttgactgtggtatgagatcagcttgattga------------gc------------ctgccactcaccagctttatgacttagtataagttatttagatttt-tgaggc---------act---------ctcctaatttttgaaaacaga----------atgccttgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttatgcacaTAAATGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGCAAAAGACCTGAAATAGGCAGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5366009 869 + 17472758 AAATCTGTCATTGTAAGAAAGCCTGTCATTGTAAAAAAACTAGCATTGGTGAAATTA----TTTCAATGTGTATATTAATAGCTATTGCCTAATTAAACTATATAT----A-AAAGTGAATATACATATTGAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATGGAAAAGcac-------tatttaatgtgttctttgtatcagccatatttagaataaaaatgcaaggtagatattagtattgccattttacagatgaggaaactatggctcagaatggttaagtgacttgtccaaagtcacact----acaaataggcccaactgtgggccttaggagtcagacattcctaaattttaata-ccgtgtatttcctctac-CAGT---TCTCTAAAATTACCTACAGTAACATGAATTGCACAGCTCTTCCATATTAACCACGGTCTTTCTGCTCTCATAGATACTGTAGTATAATAACTCCCAGTTTACCCACAAGACTT-CCCACCAGACTATGAATCCCTT-AGGTCTTCCCTGAAATCTATTCCTGGTATACAGAGTTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAAGCCCCATATtgtagtgaat----ggaaacttgactgtggtatgagatcagcttgattga------------gc------------ctgccactcaccagctttatgacttagtataagttatttagatttt-tgaggc---------act---------ctcctaatttttgaaaacaga----------atgccttgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttatgcacaTAAATGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGCAAAAGACCTGAAATAGGCAGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139406180 872 - 152096393 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAACTAGTATTGGTGAAATTA---TTTTCAATGTGTACATTAATAGCTATTGCTTTATTAAACTATATAT----A-ACAGTGAATATATATATTGAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACAGATGTAAAAGcac-------tatttaatgtgttctttgtatcagccatatttagaataaaaatgcaaggtagatattagtattgacattttacagatgaggaaactatggctcagaatggttaagtgacttgtcccaagtcacgct----acacataggcccagctgtgggtcttaggagtcagacattcctaaattttaata-ccgtgtatttcctctacacAGT---TCTCTAAAATTACCT-CAGTAACATGAATTGCACAGCTCTTCCATGTTAACCACAGTCTTTCTGCTCTCATAGATATTGTAATATAATAACTCCCAGTTTACCCACAAGACTT-CCCACCAGACTATGAATCCCTTGGGGTCTTCCCTGAAATCTATTCCTGGTATATAGAGTTTCAATAAATATTGTAATGATGGTTTTCTAAAAAAATAAGGCCCCATATTGTAGTGAAT----GGAAACTTGATTGTGGTATGAGATCAGCTTGATTGA------------GC------------ctgccactcaccagctttatgacttagtataagttatttagattttctgaggt---------act---------ctcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttatgcacaTAAATGTTCCATGAACATGACTTTACTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAATAGGCAGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57355372 862 + 70235451 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTGGTGAAATTA---TTTTCAATGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----T-AAAGTGCATATA------GAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATTGAAaagcac-------tatttaatgtattctttgtatcagccatatttataataaaaatacaagatagatattagtattgccattttacagatgaagaaactatgactcagaatggttaagttacttgtcccaagtcacact----acaaataggcccaactgtgggtcttaggagtcagatatttctaaattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAATTACCTATAGTAACACAAATTGCACAGCTCTTCCATGTTAATCACAATCTTTCTGCTCTCATATATATTATTGTATAATAACTCTCAGTTTACCCACAACACTT-CCCACCAGACTATGAATCCCTT-GGGTCTTCCCTGAAATCTATGCCTGGTATATAGAATTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAGGCCCCATATtgtagtgaat----agaaacttgactgtggtatgagatcagc----ttga------------gc------------ctgccactcaccagctttatgacttagtgtaagttatttagattttctgaggc---------act---------gtcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAACGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAACAGGCAGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63046767 862 - 75711847 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTGGTGAAATTA---TTTTCAATGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----T-AAAGTGCATATA------GAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATTGAAaagcac-------tatttaatgtattctttgtatcagccatatttataataaaaacacaagatagatattagtattgccattttacagatgaagaaactatgactcagaatggttaagttacttgtcccaagtcacact----acaaataggcccaactgtgggtcttaggagtcagatatttctaaattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAATTACCTATAGTAACACAAATTGCACAGCTCTTCCATGTTAATCACAATCTTTCTGCTCTCATATATATTATTGTATAATAACTCCCAGTTTACCCACAACACTT-CCCACCAGACTATGAATCCCTT-GGGTCTTCCCTGAAATCTATGCCTGGTATATAGAATTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAGGCCCCATATTGTAGTGAAT----AGAAACTTGACTGTGGTATGAGATCAGc----ttga------------gc------------ctgccactcaccagctttatgacttagtgtaagttatttagattttctgaggc---------act---------gtcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAACGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAACAGGCAGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13599516 862 - 18804593 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTGGTGAAATTA---TTTTCAATGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----T-AAAGTGCATATA------GAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATTGAAaagcac-------tatttaatgtattctttgtatcagccatatttataataaaaatacaagatagatattagtattgccattttacagatgaagaaactatgactcagaatggttaagttacttgtcccaagtcacact----acaaataggcccaactgtgggtcttaggagtcagatatttctaaattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAATTACCTATAGTAACACAAATTGCACAGCTCTTCCATGTTAATCACAATCTTTCTGCTCTCATATATATTATTGTATAATAACTCCCAGTTTACCCACAACACTT-CCCACCAGACTATGAATCCCTT-GGGTCTTGCCTGAAATCTATGCCTGGTATATAGAATTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAGGCCCCATATtgtagtgaat----agaaacttgactgtggtatgagatcagc----ttga------------gc------------ctgccactcaccagctttatgacttagtgtaagttatttagattttctgaggc---------act---------gtcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAACGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAACAGGCAGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13216243 876 + 18905526 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTGGTGAAATTA---TTTTCAACGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----T-AAAGTACATATA------GAA----AAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATTGAAaagcac-------tatttaatgtattctttgtatcagccatatttataataaaaatacaagatagatattagtattgccattttacagatgaagaaactatgactcagaatggttaagtgacttgtcccaagtcacact----acaaataggcccaactgtgggtcttaggagtcagatatttctaaattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAATTACCTATAGTGACACAAATTGCACAGCTCTTCCATGTTAATCACAATCTTTCTGCTCTCATATATATTATTGTATAATAACTCCCAGTTTACCCACAACACTT-CCCACCAGACTATGAATCCCTT-GGGTCTTCCCTGAAATCTATGCCTGGTATATAGCGTTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAGGCCCCATATtgtagtgaat----agaaacttgactgtggtatgagatcagc----ttga------------gc------------ctgccactcaccagctttatgacttagtgtaagttatttagattttctgagtctaatttttgactcagaaattagtcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAACGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAACAGGCAGAA i cerAty1.NW_012001075v1 C 0 I 993 s chlSab2.chr18 60046080 862 - 72318688 AAATCCATCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTAGCAAAATTA---TCTTCAATGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----T-AAAGTGCATATA------GAAAAGGAAATAATTTTTTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATGGAAAAGcac-------tatttaatgtattctttgtatcagccatatttaaaataaaaatgcaagatagatattagtattgtcattttacagatgaagaaactatgactcagaatggttaagtgacttgtcccaagtcacact----gcaaataggcccaactgtgggtcttaggagtcagacatttctaaattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAATTACCTATAGTAACACAAATTGCACAGCTCTTCCATGTTAATCACAATCTTTCTGCTCTCATATATATTATTGTATAATAACTCCCAGTTTACCCACAAGACTT-TCCACCAGACTATGAATCCCTT-GGGTCTTCCCTGAAATCTATGCCTGGTATATAGAGTTTCAATAAATATTATAATGATGGTTATTTAAAAAATTAAAGCCCCATATtgtagtgaat----agaaacttgactgtggtatgagaccagc----ttga------------gc------------ctgccactcaccagctttatgacttagtgtaagttatttagattttctgaggc---------act---------gtcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAACGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAATAGGCAGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 379674 861 - 1517660 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTGGTGAAATTA---TTTTCAACGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----T-AAAGTGCATATA------GAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATTGAAaagcac-------tatttaatgtattctttgtatcagccatatttataataaaaatacaagatagatattagtattgccattttacagatgaagaaactatgactcagaatggttaagtgacttgtcccaagtcacact----acaaataggcccaactgtgggtcttaggagtcagatatttctaaattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAATTACCTATAGTAACACAAATTGCACAGCTCTTCCATGTTAATCACAATCTTTCTGCTCTCATATATATTATTGTATAATAACTCCCAGTTTACCCACAACACTT-CCCACCAGACTATGAATCCCTT-TGGTCTTCCCTGAAATCTATGCCTGGTATAGAGAGTTTCAATAAATATTGTAATGATGGTTATTTAAAAAAATAAGGCCCCATATtgtagtgaat----agaaacttgactgtggtatgagatcagc----ttga------------gc------------ctgccactcaccagctttgtgacatagtgtaagttatttagattttctgaggc---------act---------gt-ctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAACGTTCCATGAACATGACTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACCTGAAACAGGCAGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3480004 862 + 6513552 AAATCTGTCATTGTAAGAAAACCTGTCATTGTAAAAAAAGTAGTATTGGTGAAATTA---TTTTCAATGTGTATATTAATAGCTATTGCTTTATTAAACTATACAT----A-CAAGTGCATATA------GAAAAAGAAATAATTTATTAGTGAACTTCATTGAAATA-AATTGTAAA---TAATTTTTCCAACACATGGAAAAGTAC-------TATTTAATGTATTCTTTGTATCAGCCATATTTAGAATAAAAATgcaagacagatattagtattgccattttacagatgaagaaaccaggactcagaatggttaagtgccttgtcccaagtcacact----actaataggcccaactgtgggtcttaggagtcagacatttctacattttaata-ctgtgtatttcctctacacAGT---TCTCTAAAACTACCTATAGTAACACAAATTGCACAGCTCTTCCATGTTAATCACAGTCTTTCTGCTCTCATATATATTATTGTATAATAGCTCCCAGTTTACCCACAAGACTT-CCCACCAGACTATGAATCCCTT-GGGTCTTCCCTGAAATCTATGCCTGGTATATAGAGTTTCAATAAATATTGTAATGACGGTTATTTAAAAAAATAAAGCCCCATATTGTAGTCAAT----AGAAACTTGACTGTGGTATGAGATCAGc----ttga------------gc------------ctgccactcaccagctttatgacttagtgtaagtgatttagattttctgaggc---------act---------gtcctaatttttgaaaacaga----------atgcctcgctgaatttaggaagtttaaatcatttaatgtaagcaagacgttATTCACATAAATGTTCCATGAACATGGCTTTAGTGCCATGAGACCTGCACAGCCAGAAAAAGACTTGAAATAGGCAGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105243065 793 + 117903854 AAAACTG------------------TCATTATAAGAAAACTAGTATTGACAAAATTA---TTTTCAATGTGTAAATTAATAACAATTGCTTTATTAAACTATACAC----A-AAAGTGAATATATATATTGAATAAAAAAGAATTT----GTCAACTTCATTGAAATA-AATTTTAAG---TAA-TTTCCCAACACATGGAAAAGCA--------TAATTAATATGTTCTTTGCATCAGTCATATTTAGAATAAAAATGca-----------------------------------------------agaat-gttaagtgacttgccccaagtcacact----acagatagaccctactgtgggtcttaggagtcagatattcctaaattttaata-tgatgtatttgctctacgcagt---tctctgAATTTACCCACACTACGATGAATTGCACAGCTCTTTCAT-TTAACCATGGTCTTTCTGCTCTCATAGATACTATCATATAATAACTCCCAGTTTATCCACAAGACTTCCCCCCCCAACTATGAATCCCTC-AGGTCTTCCCTGAAATCTATGCCTGGTATACAGAATTTCAATAAATATCGTAATGATGGTTATTT-AAAAAATGAAGCCCCATATTGTAGTG-AT----AGAAACTTGACTGTGATATGAGATCAAC----TTGA------------GC------------TTGCCGCTCATCAGCTTTACGACTTAGTATAAGTTACTCAGGTTTGCTGAGGA---------ACT---------CTCCTAATTTTTGAAGACAGA----------ATGCCTCACTGAATTTAGAAAGTTTAAATCATTTAATGTAAGGAACACATAATGTACGT-TATGTTCCATCAACCTGACTTTAGTGGCGTGAGACCTGCAGCGCCAGAAAAAGACCTGAAATAGGAAGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19436405 780 - 31320352 -------------------------------TAAGGAAACTAGTATTGACAAAATTA---TTTTCAATGTGTAAATTAATAACAATTGCTTTATTAAACTATACAC----A-AAAGTGAATATATATACTGAATAAGAAAGAATTT----GTGAACTTCATTGAAAT--AATTTTAAG---TAC-TTTTCCAACACATGGAAAAGCA--------TATTTAATGTGTTCTTTGCATCAGTCATATTTAGAATAAAAATGTA-----------------------------------------------agaatggttaagtgacttgccccaagtcacact----acaaatagacccaactgtgggtcttaggagtcagatattcctaaattttaata-cgatgtatttgctctatgcagt---tctctAAATTTACCCACACTAACATGAACTGCACAGCTCTTTCAC-TTAACCACAGTCTTTCTGCTCTCATAGATACTATGGTATAATAACTCCCAGTTTATCCACAAGACTT-CCCACCAGACTATGAATCCCTC-AGGTCTTCCCTGAAATCTATGCCTGGTATATAGAATTTCAAT-AATATTGTAAAGATGGTTATTT-AAAAAATGAAGCCCCATATTGTAGTGAAT----AGAAACTTGACTGTGATATGAGATCAAC----TTGA------------GC------------TTGCTGCTCAACGGCTTTATGACTTAGTCTAAGTTATTTAGATTTTCTGAGGC---------ACT---------CTCCTAAGTTTTGAAGACAGA----------ATGCCTCATTGAATTTAGAAAGTTTAAATCATTTAATGTAAGGAACACATTATGTACATAAATGTTTCATCAACCTGACTTTAGTGGCGTGAGAGCTGCATAGCCAGAAAAAGATCTGAAATAGGCAGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1631496 812 + 2203405 AAACCTGTCATTATAAGAAAACTTATCATTATAAGAAAACTAGTATTGACAAAATTA---TTTTCAATGTGTAAATTAATAACAATTGCTTTATTAAACTATACAC----A-AAAGTGAATATATATATTGAATAAGAAAGAATTT----GTGAACTTCATTGAAAT--AATTTTAAG---TAA-TTTTCCAACACATGGAAAAGCA--------TATTTAATGTATTCTTTGCATCAGTCATATTTAGAATAAAAATGCA-----------------------------------------------agaatggttaagtgacttgccccaagtcacacT----ACAAATAGACCTAACTGTGGGTCTTCAGAGTCAGATATTCCTAAATTTTATTA-CGATGTATTTGCTCTATGCAGT---TCTCTAAATTTACCCACACTAACATGAATTGCACAGCTCTTTCAT-TTAACCACAGTCTTTCTGCTCTCATAGATACTATTGTATAATAACTCCCAGTTTATCCACAAGACTT-CCCACCAGACTATGAATCCCTC-AGGTCTTCCCTGAAATCTATGCCTGCTCTATAGAATTTCAATAAATATTGTAATGATGGTTATTT-TAAAAATTAAGCCCCATATtgtagtggat----agaaacttgactgtgatatgagatcaac----ttga------------gc------------ttgccgctcaacagctttatgacttagtataagttatttagattttctgaggc---------act---------ctcctaatttttgaaGACAGA----------ATGCCTCACTGAATTTAGAAAGTTTAAATCATTTAATGTAAGGAACACATTATGTACATAAATGTTCCATCAACCTGACTTTAGTGGTGTGAGACCTGCACAGCCAGAAAAAGACCTGAAATAGGCAGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3583684 813 - 14941987 ATTTCTGTCATTGTAAGAAAACCTGTCATCATAAGAAAACTAGTATTGACAAAATTA---TTTTCAATGTGTAAATTAATAACAATTGCTTTATTAAACTATACAC----A-AAAGTGAATATATATATTGAATAAGAAAGAATTT----GTGAACTTCATTGAAATA-AATTTTAAG---TAA-TTTTCCAACACATGGAAAAGCA--------TATTTAATGTGTTCTTTGCATCAGTCATATTTAGAATAAAAATGCA-----------------------------------------------agaatggttaagtgacttgccccaagtcacact----acaaatagacccaactgtgggtcttaggagtcagatattcctaaattttaata-tgatgtatttgctcTATGCAGT---TCTCTAAATTTACCCACACTAACATGAATTGCATAGCTCTTTCAT-TTAACCACAGTCTTTCTGCTCTCATAGGTACTATTGTATAATAACTCCCAGTTTATCCACAAGACAT-CTCACCAGACTATGAATCCCTC-GGGTCTTCCCTGAAATCTATGCCTGGTATATAGAATTTAAATAAATATTGTAATGATGGTTATTT-AAAAAATGAAGCCCCACATTGTAGTGAAT----AGAAACTTGACTGTGATATGAGATCAAC----TTGA------------GC------------TTGCTGCTCATCAGTTTTATGATTTAGTATAAGTTATTTAGATTTTGTGAGGC---------ACT---------CTCCTAATTTTTGAAGACAGA----------ATGCCTCACTGAATTTAGAAAGTTTAAATCATTTAATGTAAGGAACACATTATGTACATAAATGTTCCATCAACCTAACTTTAGTGGCACGAGACCTGCACAGCCAGAAAAAGACCTGAAATAGGCAGAA i aotNan1.NW_018502140v1 I 20 C 0 s otoGar3.GL873546 11225007 841 - 20685099 ----------CTGTAAG---------------GAAGGGACCAGTATTGTCAATTTTGTTTTTTTTAATGTGGACG-TAACAGCAACTGCTCTATTGAACTACAGAG----ACCAGGTAGCTACATATATTGAAAGAGGAATAATTTATTTGCGATTGTCATTAAAATA-AATGTTAAAAGGAAGCCTTTCAAACACAGAGAATA-TGC-------TATTTAAC---TCCTTTGCATCAGTCatctttagaataaaggtgggaagcaaatagaggttttgtcattttacggatgaagaaactacgtctcggaacggttcagtaactcgcccccactcacgtc----aggagcagaccta-------gtatttaaattgaggaattcttggctcctaagc-tctagctttgcccccgcacagt-----gctgctcTGACCCTGGCTGAGAGGGACAGCACAG-TCCTCTGTGTTAACCACAGCCTTTCTGCTCTGACAGGCATTATAGTATTTCAGTTCCCAGTTTATCCACATGACTT-CCCACCAGACTATGACCCCTTT-GGGTCTTCCCTAAAATCTGTGC-------ATAGAGTCTCAATAAATAGTGCAGTGATGGCT-TTTAAAGGAATGAAGCCCAgtgctgtagttgatataaagaaacctgactttggtgcaagatcaac----tcag------------gcttcagcccctgactgccactcacctgctacatgacttggtggaagttattcagatttcctgaagt---------att---------ttcctactttttgaaaccatc----------atggcctactgaatttatgagacttatattacctaacgtaagtaaaacattatgcacgtaactgtaccataagcCTGACATTAGTGCTGTAAGAACTGCAGAGCCAG--AAGGACCCGAGACAAGCAGAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112294521 859 - 122678785 ---------------------------TTCCTAAAAGAACTAGAACTGGCAAAATTA---TGTTTAAAAAATAGTATAACAGCAGTTGTTTTATTGAAGTGCACAGGAAAA-AAAATAAATGTACATATTGAAAAAG--ATAATTT----GTGGACTTCATTAAATTGTAAAAGTACA---TA--TTTTCAAACACATGGAAACTGACACCCACATATTTAAAGTGTCCTTTGTGTGAGTCTTGcttacaataaaactgagtagtagatcccagtattctaactttatagatgagggaaggatagctcagagtagttacgtaactt-ccccaagtcatactccaaataaataaaccaaatattgcattttagga-------atgcctaaatcctaagatccagatctttcctctacacAGTGCATTTCAAATATTATCCACACTGACACGAATTGCATCATTCTGC----TTAACCACAGCCTTTCCGCACTGAGAGCCATTATGGTATTATAGCTCCTCCTGTATCCATGTAGCCT-CCCACCAGATGATGAATTTTTT-CTGTCTTCCTGAAAATATGGGCCTAAGCCATAGCATCTCAATCAATATTTCAATGATGTGTATTA-AAAGAAcaaagccccatgttgtactgggg----aggatcttaattttg-taccagatcaac----ttggccttctatccctgc------------ctagcatccattggctttatgacatggtataagttagttaggttttcggggac---------act---------ttcctagttttcgaaaacagaataacaatatatacttgactgaacatatggagcttaagtaatctaatgtatgcaaaacATCATGCACATAATTATACCATGAGCATAACTTTAGTGCTGT--GATCCACAGAGCTGGAAAGAGACCTCAAGTGTGCAAAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=117498.000000 s hg38.chr18_GL383571v1_alt 118235 14 + 198278 CCATTCAGATTGCA s panTro5.chr18 65028267 14 + 78221452 CCATTCAGATTGCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147367 14 + 77229886 CCATTCAGATTGCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5366878 14 + 17472758 CCATTCAGATTGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407052 14 - 152096393 CAATTCAGATTGCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356234 14 + 70235451 CCATTCAGATTGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63047629 14 - 75711847 CCATTCAGATTGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600378 14 - 18804593 CCATTCAGATTGTG i macNem1.NW_012016688v1 C 0 C 0 s chlSab2.chr18 60046942 14 - 72318688 CCATTCAGATTGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 380535 14 - 1517660 CCATTCAGACTGTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3480866 14 + 6513552 CCATTCAGATTGCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105243858 14 + 117903854 TCTTTCAGATTGCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437185 14 - 31320352 TCTTTCAGATTGCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632308 14 + 2203405 TCTTTCAGATTGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584497 14 - 14941987 TCTTTCAGATTGCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11225848 14 - 20685099 TTATTGGGGTTACA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112295380 14 - 122678785 CTACTTAGATAAGA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e cerAty1.NW_012001075v1 13217119 993 + 18905526 I a score=379579.000000 s hg38.chr18_GL383571v1_alt 118249 36 + 198278 TAAAAATGTCTACGTGAATTTTT----GTCTGGCTAGATC s panTro5.chr18 65028281 36 + 78221452 TAAAAATGTCTACGTGAATTTTT----GTCTGGCTAGATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147381 36 + 77229886 TAAAAATGTCTACGTGAATTTTT----GTCTGGCTAGATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5366892 36 + 17472758 TAAAAATGTCTACGTGAATTTTT----GTCTGGCTAGATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407066 36 - 152096393 TAAAAATATCTACGTGAATTTTT----GTCTGGCTAGATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356248 36 + 70235451 TAAAAATATCTACATGAATTTTT----GTCTGGCTAGATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63047643 36 - 75711847 TAAAAATATCTACATGAATTTTT----GTCTGGCTAGATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600392 36 - 18804593 TAAAAATATCTACATGAATTTTT----GTCTGGCTAGATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13218112 36 + 18905526 TAAAAATATCTACATGAATTTTT----GTCTAGCTAGATC i cerAty1.NW_012001075v1 I 993 C 0 s chlSab2.chr18 60046956 36 - 72318688 TAAAAATATCTACATGAATTTTT----GTCTGGCTAGATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 380549 36 - 1517660 TAAAAATATCTACATGAATTTTT----GTCTGGCTAGATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3480880 36 + 6513552 CAAAAATATCTACGTGAATTTTT----GTCTGGCTAGATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105243872 36 + 117903854 TAAAAATAGCTATGTGAATTTTT----GTCTGGCTAGACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437199 36 - 31320352 TTAAAATAGCTATGTGAATTTTT----GTCTGGCTAGACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632322 36 + 2203405 TAAAAATAGCTATGTGAATTTTT----GTTTGGCTAGACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584511 36 - 14941987 TAAAAATAGCTACGTGAATTTTT----GTCTGGCTAGACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11225862 35 - 20685099 TGAAGCCGTCTATGAGAG-TTCT----GTCTGCCCAGACC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112295394 38 - 122678785 TGAAAATATCAA--AGAATTTTTgggagtctgggtggctc i canFam3.chr1 C 0 I 212 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=2162855.000000 s hg38.chr18_GL383571v1_alt 118285 241 + 198278 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTATAGAAGCAGGTTAGCCGCAgtgtgtatgtttgtg-gtgtgtgtgcatgtgtgtgtgtgtgCACA-CGCTGGGGACAGGAAAGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTG-TAAGTTTATGGTAGATAATACATATGTACACCATAGTGTACTTTATATATTTT s panTro5.chr18 65028317 239 + 78221452 CAAATAATATTCTCTTAATATAC-AATTCAATTATAATAAGGAGATTATAGAAGCAGGTTAGCCGCAgtgtgtatgtttgtg-gtgtgtgtgc--gtgtgtgtgtgtgCACA-CGCTGGGGACAGGAAAGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTG-TAAGTTTATGGTAGATAATACATATGTACACCATAGTGTACTTTATATATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147417 239 + 77229886 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTATAGAAGCAGGTTAGCCGCAgtgtgtatgtttgtg-gtgtgtgtgc--gtgtgtgtgtgtgCACA-CGCTGGGGACAGGAAAGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTG-TAAGTTTATGGTAGATAATACATATGTACACCATAGTGTACTTTATATATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5366928 233 + 17472758 CAAATAAGATTCTATTAATATAC-AATTCAATTATATTAAGGAGATTATAGAAGCAGGTTAGCCGCAgtgtgtatgtctgtg-gtgt--------gtgtgtgtgtgtgCACA-TGCTGGGGACAGGAAAGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAGTTGAATAAAAGTACAACTTGAACCTG-TAAGTTTATGGTAGATAATACATATGTACACCATAGTGTACTTTATATATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407102 237 - 152096393 TAAATAATATCCTATTAATATAC-AATTCAATTATAAGAAGGAGATTAGAGAAGCAAGTTAGCCACAgtgtgtatgtttgtg-gtgtgtgt----gtgtgtgtgtgtgCACA-CACTGGGGACAGGAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTG-TAAGTTTATGGTAGATAACACATATGTACACCATAGTGTACTTTATATATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356284 234 + 70235451 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTAGAAAAGCAAGTTACCCGCAgtgtgtgtgttt----gtgtgtgt----gtctgtgcatgtgCACA-CACCAGGGACA-GAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTGTTAAGTTTATGGTAGATAATACAGACGTACACCATAGTGTACTTTATAAATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63047679 234 - 75711847 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTAGAGAAGCAAGTTACCCGCAgtgtgtgtgttt----gtgtgtgt----gtctgtgcatgtgCACA-CACCAGGGACA-GAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTGTTAAGTTTATGGTAGATAATACAGACGTACACCATAGTGTACTTTATAAATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600428 234 - 18804593 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTAGAGAAGCAAGTTACCCGCAgtgtgtgtgtgt----gtgtgtgt----gtctgtgcatgtgCACA-CACCAGGGACA-GAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTGTTAAGTTTATGGTAGATAATACAGACGTACACCATAGTGTACTTTATAAATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13218148 235 + 18905526 CAAATAATATTCTATTAATATACAAATTCAATTATAATAAGGAGATTAGGAGAGCAAGTTACCCGCAgtgtgtgtgttt--g-gtgtgtgt----ttttgtgcatgtgCACACCACCAGGGACA-GAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAACCTG-TAAGTTTATGGTAGATAATACAGATGTACA-CATAGTGTACTTTATATATTTT i cerAty1.NW_012001075v1 C 0 I 598 s chlSab2.chr18 60046992 232 - 72318688 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTAGAGAAGCAAGTTA-CCGCAgtgtgtgtgtgt----gtgtgtgt----gttcgtgcatgtgCACA-CACCAGGGACA-GAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTTGAGCCCA-TAAGTTTATGGTAGATAATACAGACGTACACCATAGTGTACTTTATATATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 380585 233 - 1517660 CAAATAATATTCTATTAATATAC-AATTTAATTATAATAAGGAGATTAGAGAAGCAAGTTACCCGCAgtgtgtgtgttt----gtgtgtgt----gtttgtgcatgtgCACA-CACCAGGGACA-GAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAACTGAATAAAAGTACAATTTGAACCTG-TAAGTTTATGGTAGATAATACAGACGTACACCATAGTGTACTTTATATATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3480916 234 + 6513552 CAAATAATATTCTATTAATATAC-AATTCAATTATAATAAGGAGATTAGAGAAGTAAGTTACCCGCAgtgtgtgtgttt----gtgtgtgt----gtttgtgcatgtgCACA-CACCGGGGACAGGAAGGGTGTGGAAATTCTCCAACCCATGGAGAGAAAATAATTGAATAAAAGTACAACTGGAACCTG-TAAGTTTATGGTAGATAATACAGACGTACACCATAGTGTAATTTATATATTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105243908 222 + 117903854 C--ATAATATTCTATTAATTTAC-AATTCAATT---ATA---AGATTAGAGAAGCAAGTTAGCTGCAGTGTA--------TGTGTTTGTGT----GTGCGTGTATGTGCACA-CACTGGGGACAGGAAGGGTGTGAAAATTCTCCAACCCATGGAAGGAAAATAATTGAATAAAAGTACAATTTGAATCTG-TAAGTTTATACCAGATAATACTTATGTACACCATAGTGTACTTCATATATTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437235 208 - 31320352 CAAATAATATTCTATTAATATAC-AATTCAATTATAATA---AGATTAGAGAAGCAAGTTAGCTGCAG------------------TGTGT----GTGGGTGTATGTGCACA-CACTGAGGGCAGG-AGGGTGTGAAAATTCTCCGACCCACGGAAGGAAAATAATTGAATAAAAGTACAACTTGAATCTG---------TACCAGATAATACATATGTACATCACAGTGTACTTCATGTATTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632358 217 + 2203405 CAAATAATATTCTATTAATATAC-AATTCAATTATAATA---AGATTAGAGAAGCAAGTTAGCTGCAg------------------tgtgt----gtgtgtgtatgtgCACA-CACTGGGGACAGGAAGGGTGTGAAAATTCTCCAACCCATGGAAGGAAAATTATTGAATAAAAGTACAACTTGAATCTG-TAAGTTTATACCAGATAATACATATGTACACCATAGTGTATTTCATATATTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584547 235 - 14941987 CAAATAATATTCTATTAATATAC-AATTCAATTATAATA---AGATTAGAGAAGCAAGTTAGCTGCAGTGTATGTTtgtgtgtgtgtgtgt----gtgtgtgtgtgCACGCA-CACTGGGGACAGGAAGGGTGTGAAAATTCTCCAACCCATGGAAGGAAAATAATTGAATAAAAGTACAACTTGAATCTG-TAAGTTTATACCAGATAATACATATGTACACCATAGTGTACCTCATATATTTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11225897 210 - 20685099 CAAATAACAGTCTATTAATGTAT-AATCCAACCGTAAGA---AGATCAGAAGAGCAAGTTAGCTGC--------------------TATGG----GTGTCTGCATGTGCTAA------GGGATAAGATGGGTTTAGAAATTCTCCAACTCATACAGAGGAGAGAACTGGATAAAAGTATAACTTGAATCTG-TAAGTTTAAGGCAGATAATATTTGTGGAAATTCTCACACATTCTACCTACCTT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I a score=778968.000000 s hg38.chr18_GL383571v1_alt 118526 92 + 198278 GTAA--GTATAGTTTTAACTTACAGTTTCATATTCACACTGACTTATTAGGTAGCACAGTTT----ATCTATAATGCAAGTCAAATCACCCTGAATAT s panTro5.chr18 65028556 92 + 78221452 GTAA--GTATAGTTTTAACTTACAGTTTCATATTCACACTGACTTATTAGGTAGCACAGTTT----ATCTATAATGCAAGTCAAATCACCCTGAATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147656 92 + 77229886 GTAA--GTATAGTTTTAACTTACAGTTTCATATTCACACTGACTTATTAGGTAGCACAGTTT----ATCTATAATGCAAGTCAAATCACCCTGAATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367161 92 + 17472758 GTAA--GTATAGTTTTAACTTACAGTTTCATATTCACACTGACTTATTAGGTAGCACAGTTT----ATCTATAATGCAAGTCAAATCACCCTGAATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407339 90 - 152096393 GTAA--GTATAGTTTTAACTT--AGTTTCATATTCACACTGACTTATTAGATAGCACAGTTT----ATCTATAATGCAAGTCAAATCACCCTGAATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356518 90 + 70235451 GTAA--GTATAGTTTTAACTTACAGTCTCATATTCACACTCACTTATTAGACAG--CAGTTT----ATCTATAATGCAAATCAAATCACCCTGAATAC i rheMac8.chr18 C 0 I 1322 s macFas5.chr18 63047913 90 - 75711847 GTAA--GTATAGTTTTAACTTACAGTCTCATATTCACACTCACTTATTAGACAG--CAGTTT----ATCTATAATGCAAATCAAATCACCCTGAATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600662 90 - 18804593 GTAA--GTATAGTTTTAACTTACAGTCTCATATTCACACTCACTGATTAGACAG--CAGTTT----ATCTATAATGCAAATCAAATCACCCTGAATAC i macNem1.NW_012016688v1 C 0 I 1326 s chlSab2.chr18 60047224 85 - 72318688 GTAA--GTATAGTT-----TTACCGTCTCATATTCATGCTCACTTACTAGACAG--CAGTTT----ATCTATAATGCAAATCAAATCACCCTGAATAC i chlSab2.chr18 C 0 I 1326 s manLeu1.NW_012106698v1 380818 90 - 1517660 GTAA--GTATAGTTTTAACTTACAGTCTCATATTCACACTCACTTATTAGACAG--CAGTTT----ATCTATAATGCAAATCAAATCACCCTGAATAC i manLeu1.NW_012106698v1 C 0 I 1327 s colAng1.NW_012115433v1 3481150 90 + 6513552 GTAA--GTATGGTTTTAACTTACAGTCTCATATTCACACTCACTTATTAGATAG--CAGTTT----ATCTATAATGCAAATCAAATCACCCTAAATAT i colAng1.NW_012115433v1 C 0 I 53 s calJac3.chr13 105244130 92 + 117903854 GTAA--ATATAGTTTTAACTTAAAGTCTCATATTCGCACTTACTTGATAGATAGCACAGTTT----ATCCCTAATGCAAATAAAGTCACCCTGAATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437443 92 - 31320352 GTAA--ATATAGTTTTAACTTAAAGTCTCATATTCATACTTACTTGGTAGATAGCACAGTTT----ATCTCTAATGCAAGTCAAGTCACCCTGAATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632575 92 + 2203405 GTAA--ATATAGTTTTAACTTAAAGTCTCACATTCACACTTACTTGGTAGATAGCACAGTTT----ATCTCTAAAGCAAGTCAAGTTACCCTGAATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584782 92 - 14941987 GTAA--ATATAGTTTTAACTTAAAGTCTCATATTCACACTTACTTGGTAGATAGCACAGTTT----ATATCTAATGCAAGTCAAGTCACCCTGAATAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226107 98 - 20685099 ATAATCATATTGTTTTAACTTACAGTCTTCTGCTCAGATCTGCTGATTAGATGGCACAGTTTGCTGATCAATGACGCAAATCAAATCACCCCGGGCAT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e cerAty1.NW_012001075v1 13218383 598 + 18905526 I a score=53093.000000 s hg38.chr18_GL383571v1_alt 118618 13 + 198278 AAACTGTTCTCAG s panTro5.chr18 65028648 13 + 78221452 AAACTGTTCTCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147748 13 + 77229886 AAACTGTTCTCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367253 13 + 17472758 AAACTGTTCTCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407429 13 - 152096393 AAACTGTTCTCAG i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63048003 11 - 75711847 --ACTGCTGTCAG i macFas5.chr18 C 0 C 0 s calJac3.chr13 105244222 13 + 117903854 AAATTGCTCTCAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437535 13 - 31320352 AAATTGCTCTCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632667 13 + 2203405 AAATTACTCTCAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584874 13 - 14941987 AAATTGCTCTCAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226205 13 - 20685099 AAACTGCTCTCGG i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e colAng1.NW_012115433v1 3481240 53 + 6513552 I e manLeu1.NW_012106698v1 380908 1327 - 1517660 I e chlSab2.chr18 60047309 1326 - 72318688 I e cerAty1.NW_012001075v1 13218383 598 + 18905526 I e macNem1.NW_012016688v1 13600752 1326 - 18804593 I e rheMac8.chr18 57356608 1322 + 70235451 I a score=119549.000000 s hg38.chr18_GL383571v1_alt 118631 22 + 198278 GTTGAGCTTCCTGGCACATCAG s panTro5.chr18 65028661 22 + 78221452 GTTGAGCTTCCTGGCACATCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147761 22 + 77229886 GTTGAGCTTCCTGGCACATCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367266 22 + 17472758 GTTGAGCTTCCTGGCACATCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407442 22 - 152096393 GTTGAGCTTCCTGGCACATCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57357930 22 + 70235451 GTTGAGCTTCCTGGCACATCAG i rheMac8.chr18 I 1322 C 0 s macFas5.chr18 63048014 17 - 75711847 GTTTAACCTTCTAGCCT----- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13602078 22 - 18804593 GTTGAGCTTCCTGGCACATCAG i macNem1.NW_012016688v1 I 1326 C 0 s cerAty1.NW_012001075v1 13218981 22 + 18905526 GTTGAGCTTCCTGGCACATCAG i cerAty1.NW_012001075v1 I 598 C 0 s chlSab2.chr18 60048635 22 - 72318688 GTTGAGCTTCCTGGCACATCAG i chlSab2.chr18 I 1326 C 0 s manLeu1.NW_012106698v1 382235 22 - 1517660 GTTGAGCTTCCTGGCACATCAG i manLeu1.NW_012106698v1 I 1327 C 0 s calJac3.chr13 105244235 21 + 117903854 GTTCAACATTCTAGC-CTTCAG i calJac3.chr13 C 0 I 1020 s saiBol1.JH378121 19437548 21 - 31320352 GTTCAACATTCTAGT-CTTCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632680 21 + 2203405 GTTCAACATTCCAGC-CTTCAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584887 21 - 14941987 GTTCAACATTCCAGC-CTTCAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226218 17 - 20685099 ATTCCATATTCTGGCCT----- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e colAng1.NW_012115433v1 3481240 53 + 6513552 I a score=111175.000000 s hg38.chr18_GL383571v1_alt 118653 24 + 198278 GGAGAGAAAAGATGGGAATAAGTT s panTro5.chr18 65028683 24 + 78221452 GGAGAGAAAAGATGGGAATAAGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147783 24 + 77229886 GGAGAGAAAAGATGGGAATAAGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367288 24 + 17472758 GGAGAGAAAAGATGGGAATAAGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407464 24 - 152096393 GGAGACAAAAGATGGGAATAAGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57357952 24 + 70235451 GGAGAGAAAAGATGGTAATAAGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63048031 6 - 75711847 ------------------TAAGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13602100 24 - 18804593 GGAGAGAAAAGATGGGAATAAGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13219003 24 + 18905526 GGAGAGAAAAGGTGGGAATAAGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60048657 24 - 72318688 GGAGAGAAAAGATGGGAATAAGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 382257 24 - 1517660 GGAGAAAAAAGATGGGAATAAGTT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105245276 24 + 117903854 GGAGAGAAAAGATGGGAATAAGTT i calJac3.chr13 I 1020 T 1044 s saiBol1.JH378121 19437569 1 - 31320352 -----------------------T i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11226235 6 - 20685099 ------------------TAAGTT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e aotNan1.NW_018502140v1 3584908 0 - 14941987 C e cebCap1.NW_016107689v1 1632701 0 + 2203405 C e colAng1.NW_012115433v1 3481240 53 + 6513552 I a score=22232.000000 s hg38.chr18_GL383571v1_alt 118677 11 + 198278 TTCTGTGAGAA s panTro5.chr18 65028707 11 + 78221452 TTCTGTGAGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147807 11 + 77229886 TTCTGTGAGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367312 11 + 17472758 TTCTGTGAGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407488 11 - 152096393 TTCTGTGAGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57357976 11 + 70235451 TTCTGTGAGGA i rheMac8.chr18 C 0 T 1343 s macFas5.chr18 63048037 2 - 75711847 CT--------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13602124 11 - 18804593 TTCTGTGAGGA i macNem1.NW_012016688v1 C 0 T 1347 s cerAty1.NW_012001075v1 13219027 11 + 18905526 TTCTGTGAGGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60048681 11 - 72318688 TTCTGTGAGGA i chlSab2.chr18 C 0 T 1347 s manLeu1.NW_012106698v1 382281 11 - 1517660 TTCTGTGAGGA i manLeu1.NW_012106698v1 C 0 T 1348 s calJac3.chr13 105244256 4 + 117903854 TTCT------- i calJac3.chr13 T 1044 C 0 s saiBol1.JH378121 19437570 3 - 31320352 -TCC------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632701 4 + 2203405 TTCT------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584908 4 - 14941987 TTCT------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226241 8 - 20685099 -TCTGATAG-- i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e colAng1.NW_012115433v1 3481240 53 + 6513552 I a score=41910.000000 s hg38.chr18_GL383571v1_alt 118688 4 + 198278 GACA s panTro5.chr18 65028718 4 + 78221452 GACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147818 4 + 77229886 GACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367323 4 + 17472758 GACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407499 4 - 152096393 GACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356644 4 + 70235451 GACA i rheMac8.chr18 T 1343 C 0 s macFas5.chr18 63048039 4 - 75711847 GACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600788 4 - 18804593 GACA i macNem1.NW_012016688v1 T 1347 C 0 s cerAty1.NW_012001075v1 13219038 4 + 18905526 GACA i cerAty1.NW_012001075v1 C 0 T 656 s chlSab2.chr18 60047345 4 - 72318688 GACA i chlSab2.chr18 T 1347 C 0 s manLeu1.NW_012106698v1 380944 4 - 1517660 GACA i manLeu1.NW_012106698v1 T 1348 C 0 s calJac3.chr13 105244260 4 + 117903854 GACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437573 4 - 31320352 GACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632705 4 + 2203405 GACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584912 4 - 14941987 GACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226249 4 - 20685099 AATA i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e colAng1.NW_012115433v1 3481240 53 + 6513552 I a score=67569.000000 s hg38.chr18_GL383571v1_alt 118692 10 + 198278 TATAACCGTC s panTro5.chr18 65028722 10 + 78221452 TATAACCGTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147822 10 + 77229886 TATAACCGTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367327 10 + 17472758 TATAACCGTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407503 10 - 152096393 TATAACCATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356648 10 + 70235451 TATAATTGTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63048043 10 - 75711847 TATAACTGTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600792 10 - 18804593 TATAACTGTC i macNem1.NW_012016688v1 C 0 C 0 s chlSab2.chr18 60047349 10 - 72318688 TATAACTGTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 380948 10 - 1517660 TATAACTGTC i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105244264 10 + 117903854 TACAACTGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437577 10 - 31320352 TACAACTGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1632709 10 + 2203405 TACAACTGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584916 10 - 14941987 TACAACTGTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226253 5 - 20685099 -----TCGTC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e colAng1.NW_012115433v1 3481240 53 + 6513552 I e cerAty1.NW_012001075v1 13219042 656 + 18905526 T a score=2302054.000000 s hg38.chr18_GL383571v1_alt 118702 262 + 198278 TTCAACTTGCTAgagattacaaaaattatttcctgaatttgtctttcaaccctggaaagatttgtaattaagtaaaaagataataaaagcaaataaactcaCTGATTTAATTATTTGATGATAAAGTAAGGGATA-TGGTTTTAATCACTAGAACaatctgcatctatttggcattgaaaggccaacaatgcttaataaacgttatcattatagagattttgaaagactggacttaagatttcaatttta---aaatgtctaatta s panTro5.chr18 65028732 262 + 78221452 TTCAACTTGCTAgagatgacaaaaattatttcctgaatttgtctttcaaccctggaaagatttgtaattaagtaaaaagataataaaagcaaataaactcactgatttaattatttgatgataaagtaagggata-tggttttaatcactagaacaatctgcatctatttggcattgaaaggccaacaatgcttaataaacgttatcattatagagattttgaaagattggacttaagatttcaatttta---aaatgtctaatta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64147832 262 + 77229886 TTCAACTTGCTAgagatgacaaaaattatttcctgaatttgtctttcaaccctggaaagatttgtaattaagtaaaaagataataaaagcaaataaactcaCTGATTTAATTATTTGATGATAAAGTAAGGGATA-TGGTTTTAATCACTAGAACaatctgcatctatttggcattgaaaggccaacaatgcttaataaacgttatcattatagagattttgaaagattggacttaagatttcaatttta---aaatgtctaatta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367337 262 + 17472758 TTCAACTTGCTAgagatgacaaaaattatttcctgaatttgtctttcaaccctggaaagatttgtaattaagtaaaaagataataaaagcaaataaactcaCTGATTTAATTACTTGATGATAAAGTAAGGGATA-TGGTTTTAATCACTAGAACAATCTGCATCTATTTGGCATTGAAAGGCCAACAATGCTTAATAAACGTCATCATTATAGAGATTTTGAAAGATTGGACTTAAGATTTCAATTTTA---AAACGTCTAATTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407513 262 - 152096393 TTCAACTTGCTAgagatgacaaaaattatttcctgaacttgtctttcaactctggaaagatttataattaagtaaaaagataacaaaagcaaataaactcaCTGATTTAATTATTTGATGATAAAGTAAGGGATA-TGGTTTTAATCACTAGAACAATCTGCATCTATTTGGCATTGGAAGGCCAACGATGCTTAATAAATGTTATCATTATAGAGATTTTGAAAGATTGAACTTAAGATTTCAATTTTA---AAATGTCTAATTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356658 262 + 70235451 TTCAACTTGCTAGAGACGATAAAAATTATTTACTGAACTTGTCTTTCAACCCTAGAAAGATTTATAATTAAGGAAAAAGATAACAGAAGCAAATAAACTCACTGATTTAATTATCTGATGATAAAGTAAGGGATA-TGGTTTTAAACACTAGagcaatctgcatctatttggcactgaaaggccaacaatgtttaataaacgttatcattgtagagattttggaagatcagacttaagatttcaatttta---aaatgtctaatta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63048053 262 - 75711847 TTCAACTTGCTAGAGACGATAAAAATTATTTACTGAACTTGTCTTTCAACCCTAGAAAGATTTATAATTAAGGAAAAAGATAACAGAAGCAAATAAACTCACTGATTTAATTATCTGATGATAAAGTAAGGGATA-TGGTTTTAAACACTAGAGCAATCTGCATCTATTTGGCACTGAAAGGCCAACAATGTTTAATAAACGTTATCATTGTAGAGATTTTGGAAGATCAGACTTAAGATTTCAATTTTA---AAATGTCTAATTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13600802 262 - 18804593 TTCAACTTGCTAGAGACGATAAAAATTATTTACTGAACTTGTCTTTCAACCCTAGAAAGATTTATAATTAAGGAAAAAGATAACAGAAGCAAATAAACTCACTGATTTAATTATCTGATGATAAAGTAAGGGATA-TGGTTTTAAACACTAGagcaatctgcatctatttggcactgaaaggccaacaatgtttaataaacgttatcattgtagagattttggaagatcagacttaagatttcaatttta---aaatgtctaatta i macNem1.NW_012016688v1 C 0 C 0 s chlSab2.chr18 60047359 262 - 72318688 TTCAACTTGCTAGAGACGATAAAAATTATTTACTGAACTTGTCTTTCAACCCTAGAAAGATTTATAATTAAGGAAAAAGATAACAAAAGCAAATAAACTCACTGATTTAATCATCTGATGATAAAGTAAGGGATA-TGGTTTTAAACGCTAGAGCAATCTGCATCTATTTGGCACTGAAAGGCCAGCAATATTTAATAAACGTTATCATTGTAGAGATTTTGGAAGATCAGACTTAAGATTTCAATTTTA---AAATGTCTAATTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 380958 262 - 1517660 TTCAACTTGGTAGAGACGATAAAAATTATTTACTGAACTTGTCTTTCAACCCTATAAAGATTTATAATTAAGGAAAAAGATAACAGAAGCAAATAAACTCACTGATTTAATTATCTGATGATAAAGTAAGGGATA-TGGTTTTAAACACTAGagcaatctgcatctatttggcactgaaaggccaacaatgtttaataaacgttatcattgtagagattttggaagatcagacttaagatttcaatttta---aaatgtctaatta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3481293 262 + 6513552 TTCAACTTGTTACAGACGATAAAAATTATTTACTGAACTTGtctttcaaccctggaaagatttataattaagtaaaaagataacaaaagcaaataaactcaCTGATTTAATTATTTGATGATAAAGTAAGGGATA-TGGTTTTAAACACTAGAGCAATCTGCATCTATTTGGCATTGAAAGGCCAACAATGTTTAATAAAAGTTATCATTGTAGAGATTTTGGAAGATTAGACTTAAGATTTCAATTTTA---AAATGTCTAATTA i colAng1.NW_012115433v1 I 53 C 0 s calJac3.chr13 105244274 251 + 117903854 TTCAA----------ATAACAGAAATTATTTCCTGAACTTGTCTTTCAACACTGGAAAGATTTATAACTAAGTAAAAAGATAATAAAAGCAAATAAACTCACTGATTTAATTATTTCATGATAAAGTAAGGGATA-TGGCTTT-ATCACTAGAACAACCTGCAGCTATTTGGCATTGAAAGGCCCACAGTGCTTCATAAACATTATCACTGCAAAGATTTTGAAAGATCAGATTTAAGATTTCAATTTTA---AAATGTCTAGTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19437587 251 - 31320352 TTCAA----------ATAACAAAAATTATTTCCTGAACTTGTCTTTCGACCCTGGAAAGATTTATAGCTAATTAAAAAG---ATAAAAGCAAATAAACTCACTGATTTAATTATTTCATGATAAAGTAAGGGATA-CGGTTTT-ATCACTAGAACAACCTACAGCTATTTGGCATTGAAAGTCCCACAGCGTTTCATAAACATTATCACTGCAGAGATTTTGAAAGATCAGATTTAAGATTTCAATTTTATTTATTTGTTTAGTTA i saiBol1.JH378121 C 0 M 875 s cebCap1.NW_016107689v1 1632719 251 + 2203405 TTCAA----------ATAACAAAAATTATTTCCTGAACTTGtctttcgaccctggaaagatttataactaattaaaaagataataaaagcaaataaactcattgatttaattatttcatgataaagtaagggata-tggtttt-atcactagaacaacctgcagctgtttggcattgaaaggcccacagtgtttcataaatattaccactgcagagattttgaaagatcagatttaagatttcaatttta---aaatgtctagtta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3584926 251 - 14941987 TTCAA----------ATAACAAAAATTATTTCCTGAACTTGtctttcaaccctggaaagatttataactaagtaaaaagataataaaagcaaataaactcactgatttaattatttcatgataaagTAAGGGATA-CGGTTTT-ATCACTAGAACAACCTGCAGCTATTTGGCATTGAAAGGCGCACAGTGTTTCATAAACATTATCACTGCAGAGATTTTGAAagatcagatttaagatttcaatttta---aaatgtctagtta i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226258 247 - 20685099 TCCAATTGGCAGGAGATGAC--AAATTATTTTCTGGACATGTCTTTCAACCTTAGGAAAATTTACAAAGATTCAAAA-------------AACTAAATTCATAGATTTAATTCTCTAATGAAGAGATCAGGGATATTGGTTTTAATCACTGGAACATTCTGCATACATTTAACATCAAAGTATCTATAATGTTTAAT-AACGCCATTGTTGTAAAGATTCTAATGGATTGACCTTGAAATTTCAATATAA---AAATGTCTAGTTA i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e cerAty1.NW_012001075v1 13219042 656 + 18905526 T a score=9555.000000 s hg38.chr18_GL383571v1_alt 118964 1 + 198278 a s panTro5.chr18 65028994 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148094 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367599 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407775 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356920 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63048315 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13601064 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s chlSab2.chr18 60047621 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 381220 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3481555 1 + 6513552 A i colAng1.NW_012115433v1 C 0 I 312 s calJac3.chr13 105244525 1 + 117903854 A i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1632970 1 + 2203405 a i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3585177 1 - 14941987 a i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226505 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e saiBol1.JH378121 19437838 875 - 31320352 M e cerAty1.NW_012001075v1 13219042 656 + 18905526 T a score=139532.000000 s hg38.chr18_GL383571v1_alt 118965 16 + 198278 gtaaatgaccttaagt s panTro5.chr18 65028995 16 + 78221452 gtaaatgaccttaagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148095 16 + 77229886 gtaaatgaccttaagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367600 16 + 17472758 GTAAATGACCTTAAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407776 16 - 152096393 GTAAATGACCTTAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57356921 16 + 70235451 gtaaatgaCCTTAAGT i rheMac8.chr18 C 0 I 321 s macFas5.chr18 63048316 16 - 75711847 GTAAATGACCTTAAGT i macFas5.chr18 C 0 I 321 s macNem1.NW_012016688v1 13601065 16 - 18804593 gtaaatgaCCTTAAGT i macNem1.NW_012016688v1 C 0 I 321 s chlSab2.chr18 60047622 16 - 72318688 GTAAATGACCTTAAGT i chlSab2.chr18 C 0 I 321 s manLeu1.NW_012106698v1 381221 16 - 1517660 gtaaatgaCCTTAAGT i manLeu1.NW_012106698v1 C 0 I 321 s colAng1.NW_012115433v1 3481868 16 + 6513552 GTAAATGACCTTAAGC i colAng1.NW_012115433v1 I 312 C 0 s calJac3.chr13 105244526 16 + 117903854 GTAAATGACCTTAAGT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1632971 16 + 2203405 gtaaatgactttaagt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3585178 16 - 14941987 gtaaatgactttaagt i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226506 16 - 20685099 GTAACAGATCCTGAAT i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e saiBol1.JH378121 19437838 875 - 31320352 M e cerAty1.NW_012001075v1 13219042 656 + 18905526 T a score=616574.000000 s hg38.chr18_GL383571v1_alt 118981 81 + 198278 tgtggcagcaatg----tggcatcacagcaacttgacaatgttttaatgattgttg-gaatgtttaaatgaactaat-aagacttac s panTro5.chr18 65029011 81 + 78221452 tgtggcagcaatg----tggcatcacagcaacttgacaatgttttaatgattgttg-gaatgtttaaatgaactaat-aagacttac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148111 81 + 77229886 tgtggcagcaatg----tggcatcacagcaacttgacaatgttttaatgattgttg-gaatgtttagatgaactaat-aagacttac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367616 80 + 17472758 TGTGGCAGCAATG----TGGCATCACAGCAACTTGACAATGTTTTAATGATTGTTG-GAATG-TTAAATGAACTGAT-AAGACTTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407792 81 - 152096393 TGTGGCAGCAATT----TGGCATCACAGCAACTTGACAATGTTTTAATGATTGTTG-GAATGTTTAAATGAACTAAT-AAGACTTAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57357258 81 + 70235451 tgtggcagcaatt----tggcatcacagcaacttgacaaaattttaatgattgttg-gaatgtttaaatgaactaat-aagacttac i rheMac8.chr18 I 321 C 0 s macFas5.chr18 63048653 81 - 75711847 tgtggcagcaatt----tggcatcacagcaacttgacaaaattttaatgattgttg-gaatgtttaaatgaactaat-aagacttac i macFas5.chr18 I 321 C 0 s macNem1.NW_012016688v1 13601402 81 - 18804593 tgtggcagcaatt----tggcatcacagcaacttgacaaaattttaatgattgttg-gaatgtttaaatgaactaat-aagacttac i macNem1.NW_012016688v1 I 321 C 0 s chlSab2.chr18 60047959 81 - 72318688 tgtggcagcaatt----tggcatcacagcaacttgacaaaattttaacgattgtta-gaatgtttaaatgaactaat-aagacttat i chlSab2.chr18 I 321 C 0 s manLeu1.NW_012106698v1 381558 82 - 1517660 tgtggcagcaatt----tggcatcacagcaacttgacaaaattttaatgattgttg-gaatgtttaaatgaactaataaagacttac i manLeu1.NW_012106698v1 I 321 C 0 s colAng1.NW_012115433v1 3481884 81 + 6513552 TGTGGCAGCAATT----TGGCATCACAGCAACTTGACAAAGTTTTAATGATTGTTG-GAATGTTTAAATGAACTAAT-AAGACTTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105244542 80 + 117903854 TGTGACAGCAACT----TGGCATCACAGCAACCTGACAATGTTTTAATGACTGTTGAAAATGTTTAAATTAACT--T-AAGACTTAC i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1632987 80 + 2203405 tgtgacagcaact----tggcatcacagcaaactgacaatgttttaatgactgttgaaaatgtttaaatgaact--t-aagacttac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3585194 80 - 14941987 tgtgacagcaact----tggcatcacagcaacctgacaatgttttaatgactgctgaaaatgtttaaatgaact--t-aagacttac i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226522 82 - 20685099 TGTCACAGCAAGTTAAATGATGTCAAAGCAACTTGACAATATTTTACAGATTATTA-AAAAG-GTAGATGAATT--T-CAGACTAGC i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e saiBol1.JH378121 19437838 875 - 31320352 M e cerAty1.NW_012001075v1 13219042 656 + 18905526 T a score=69776.000000 s hg38.chr18_GL383571v1_alt 119062 21 + 198278 tatacttaATTTTTTTT--------------------------------------------------AATT s panTro5.chr18 65029092 20 + 78221452 tatacttaattttttt---------------------------------------------------aatt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148192 20 + 77229886 tatacttaattttttt---------------------------------------------------aatt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367696 20 + 17472758 TATACTTAATTTTTTT---------------------------------------------------AATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407873 20 - 152096393 TATACTTCATTTTTTT---------------------------------------------------AATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57357339 21 + 70235451 tatacttagttttttat--------------------------------------------------aatt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63048734 21 - 75711847 tatacttagttttttat--------------------------------------------------aatt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13601483 21 - 18804593 tatacttagttttttat--------------------------------------------------aatt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13218386 21 + 18905526 TATACTTAGTTTTTTTT--------------------------------------------------AATT i cerAty1.NW_012001075v1 T 656 C 0 s chlSab2.chr18 60048040 21 - 72318688 tatacttaGTTTTTTCA--------------------------------------------------AATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 381640 21 - 1517660 tatacttaGTTTTTTTT--------------------------------------------------AATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3481965 21 + 6513552 AATACTTAATTTTTTTA--------------------------------------------------AATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105244622 71 + 117903854 TACAATTAATTTGTCATTATTAGATTTACAAGATTTCTTTAAATCTGGGAAATGTTTTCCTTTTGTGtatt i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1633067 71 + 2203405 tacacttaattttttattattagatttacaagatttctttaaatcttggaaaagttttccttttgtgtatt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3585274 71 - 14941987 tacatttaattttttattattagatttacaagatttctttaaatcttggaaaagttttccttttgtgtatt i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226604 56 - 20685099 tataattaatacttaag---------------attaatttaaatttggaaaaaattttctttatatatatt i otoGar3.GL873546 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112295432 212 - 122678785 I e saiBol1.JH378121 19437838 875 - 31320352 M a score=4207505.000000 s hg38.chr18_GL383571v1_alt 119083 462 + 198278 TAAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAACGTATGAAGGGATATAATTACTAAGTTAAAAGTAAAATAAATAGACTAATGATATTTTTTAGTTGAATTTAAACACAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTAACTCTCATCTCTACATAGTC-----TTTGCTGTACATAAACATTTCTTTCAGATT-AAAAAAAAATTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAAGCTATTTGTCATACTACACTATCACAGTTTGGCTAGCTCATATTAAAATTGCTTCATATTATTCTGtaactatatagataaatggtcaataacaacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTCGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG s panTro5.chr18 65029112 460 + 78221452 taAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAACATATGAGGGGATATAATTACTAAGTTATAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAATTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTAACTCTCATCTCTACATAGTC-----TTTGCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAAGCTATTTGTCATACTACGCTATCATGGTTTGGCTAGCTCATATTAAAATTGCTTCATATTATTCTGtaactatatagataaatggtcaataacaacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTCGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148212 460 + 77229886 taAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAACATATGAGGGGATATAATTACTAAGTTATAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAATTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTAACTCTCATCTCTACATAGTC-----TTTGCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAAGCTATTTGTCATACTACGCTATCATGGTTTGGCTAGCTCATATTAAAATTGCTTCATATTATTCTGtaactatatagataaatggtcaataacaacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTCGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTACGGTTTCAATAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5367716 461 + 17472758 TAAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAACGTATGAAGGGATATAATTACTAAGTTATAAGTAAAATAAATAGACTAGTGATATTTTT-AGTTGAATTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTAACTCTCATCTCTACATAGTC-----TTTGCTGTACATAAACATTTCTTTCAGATT-AAAAAAAAATTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAAGCTATTTGTCATACTACACTATCACAGTTTGGCTAGCTCATATTAAAATTGCTTCATATTATTCTGTAACTATATAGATAAATGGTCAATAACAACAAAAATCCATATACAAT-AAA---AACATAAATTTTAAAATTAATTTTTGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139407893 454 - 152096393 TAAACTATTTAAAA-----ATAAAA-TGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGGATATAATTACTAAGTTATAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAATTTAAATATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTAACTCTCATCTCTACATAGAC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAAAAAAATTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAAGCTGTTTGTCATACTACACTATCACCGTTTGGCTA--TCATATTAAAATTGCTTCATATTATTCTGTAACTATATAGATAAATGGTCAACAACGACAAAAATCCATATACAAT-AAA---AGTATAAATTTTTAAATTAATTTTCGAGAGGGAAGA------GTCTATGATGATTATGCTTATGGTTTCAATAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57357360 456 + 70235451 taaactatttaaAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGCATATAATTATTAAGTTACAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAGTTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTCTCATCTCTACATAGTC-----TTTTCTGTATATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAATACCATTTGATAA--ATCTTAGTTTTCTTCAATCTATTTGTCATACTACACTATCAAGATTTGGCTATCTCATATTAAAATGGCTTCATATTATTCTGCaactatatagataaatggtcaataactacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTTGAGAGGGAAGA------GTCTATCATGATTATGCTTATGGTTTCAATAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63048755 459 - 75711847 taaactattt-aaA-----ATTAAATTGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGCATATAATTATTAAGTTACAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAGTTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTCTCATCTCTACATAGTC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAATACCATTTGATAA--ATCTTAGTTTTCTTCAATCTATTTGTCATACTACACTATCAAGATTTGGCTATCTCATATTAAAATGGCTTCATATTATTCTGCaactatatagataaatggtcaataactacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTTGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13601504 460 - 18804593 taaactatttaaAA-----ATAAAATTGATTAC-----ATTTGAAAGTACAATTTAAAATGTATGAAGGCATATAATTATTAAGTTACAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAGTTTAAACATAAACTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTCTCATCTCTACATAGTC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAATACCATTTGATAA--ATCTTAGTTTTCTTCAATCTATTTGTCATACTACACTATCAAGATTTGGCTATCTCATATTAAAATGGCTTCATATTATTCTGCAACTATATAGATAAATCGTCAATAACTACAAAAATCCATATACAAT-AAA---AATATAAATTTTAAAATTAATTTTTGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13218407 460 + 18905526 TAAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGCATATAATTATTAAGTTACAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAGTTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTGTCATCTCTACATAGTC-----TCTTCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAATCTATTTGTTATACTACACTATCAAGATTTGGCTATCTCATATTAAAATGGCTTCATATTATTCTGCaactatatagataaatggtcaataactacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTTGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60048061 460 - 72318688 TAAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGCATATAATTATTAAGTTACAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAGTTTAAACGTAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTCTCATCTCTACATAGTC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAACACCATTTGATAA--AGCTTAGTTTTCTTCAATCTATTTGTCATACTACACTATCAAGATTTGGCTATCTCATATTAAAATTGCTTCATATTATTCTGTAACTATATAGATAAATGGTCAATAACTACAAAAATCCATATACAAT-AAA---AATATACATTTTAAAATTAATTTTTGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 381661 460 - 1517660 TAAACTATTTAAAA-----ATAAAATTGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGCATATAATTATTAAGTTACAAGTAAAATAAATAGACTAATGATATTTTT-AGTTGAGTTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTCTCATCTCTACATAGTC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAAAAAA-TTCACCCT--TGTAAAACACCATTTGATAA--ATCTTAGTTTTCTTCAATCTATTTGTCATACTACACTATCAAGATTTGGCTATCTCATATTAAAATGGCTTCATATTATTCTGCaactatatagataaatggtcaataactacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTTGAGAGGGAAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3481986 459 + 6513552 TAAACTATTTAAAA-----AT-AAATTGATTAT-----ATTTGAAAGTACAATTTAAAATGTATGAAGGGATATAGTTATTAAGTTATAAGTAAAATTAGTGGACTAATGATATTTTT-AGTGGAATTTAAACATAAATTGAGGCATTTTTATGATG-TGTC------AAAAAACAATGGTAGTTTCACTCTCATCTCTACATAGTC-----TTTTCTGTACATAAATATTTCTTTCAGATTAAAAAAAAA-TTCACCCT--TGTAAAACACCATTTGATAA--ATGTTAGTTTTCGTCAATCTATTTGTCATACTACAC-ATCAAGGTTTGGCTATCTCATTTTAAAATTGCTTCAGATTATTCTGtaactatatagataaatggtcaataactacaaaaatccatatacaat-aaa---aatataaattttaaaattaatTTTCAAGACGTTAGAGTCT--GTCTATCATGATTATGCTTATGGTTTCAATAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105244693 447 + 117903854 taaaatatttaaaa-----ataaaatCGAATAC-----ATTTGAAAGTACAATTTAAAATGTATGAAGGGATATAATTACT--GTTACAAGTAAAATAAATAGACTAATGATTTTTTT-AGTTGAATTTAAATGTAAATTGAGGCATTTTTATGATG-TGTT------GAAAAACAATGGTAGCTTAACT-----CTCTACACAGTC-----TTTTCTGCACAAAAACATTTCTTTCAGATT-AAAACATATTTCACCGT--TGTAAAAAACCATTTGATAA--ATCTTAGTTTTCGTCAGTCTGGTTGTCATACTACTATACCAAGGTTTGACTGTCTCATATTAAAATTGCTTCATATTACCCTGTAACTATGTAGataaataatcaataatcataaaaatctatattcaat-aaa---aatacaaattttaaagttaattttCAAGAGGGAAAAG---------ATTATGATTATGCTTAAGGTTTCAAGAG i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1633138 443 + 2203405 taaaatatttaaaa-----ataaaattgaatacattatatttgaaactac-----aaaatgtatgaagggatataattaCT--GTTATAAGTAACATAAATAGACTAATGATTTTTTT-AGTTGAATTTAA--------------ATTTTTATGATG-TGTT-------AAAAACAATGGTAGCTTAACTA--GACTCTACATAGTC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAACATATTTCACCCT--TGTAAAAAACCATTTGATAA--ATCTTAGTTTTCTTCAGTCTGGTTGCCATACTGCAATACCACGGTTTGACTGTCTCATATTAAAATTGCTTCATATTACTCTGTAACTATATAGATAAATGATCAATAACCATAAAAATCTATATTCAATAAAA---AATATAAATTTTAAAGTTAATTTTCAAGAGGGAAAAGATC--ATCTATCATGATTATGCTTAAGGTTTCAAGAA i cebCap1.NW_016107689v1 C 0 I 323 s aotNan1.NW_018502140v1 3585345 454 - 14941987 taaaatatttaaaa-----ataaaattgaatacattatatttgaaagtacaatttaaaatgtatgaagggatataattaCT--GTTATAAGTAAAATAAATAGACTAATGATTTTTTT-AGTTGAATTTAAATGTAAATTGAGGCATTTTTATGATG-TGTT------AAAAAACAATGGTAGCTTAACT-----CTCTACATAGTC-----TTTTCTGTACATAAACATTTCTTTCAGATT-AAAACACATTTTGCCCT--TGTAAAAAACCATTTGATAA--ATCTTAGTTTTCCTCAGTCTGGTTGTCATACTACAATACCAAGGTTTGACTGTCTCATATTAAAATTG-TTCATATTACTCTGtaactatatagataaatgatcaataaccataaacatctatattcaat-aaa---aatataaatTTTAAAGTTAATTTTCAAGAAGGAAAAGATT------ATCATGATTACGCTTAAGGTTTCAAGAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11226660 412 - 20685099 taaaatattttaaa-----ataaa------tat-----GCTTGAAAATCCAACTTAAAGCATATTAGAG-----AATTTCTAAGTTATAAATAAAATAA----ACTAATGAGATTTTGGAGTGGAATTTAAAGTTAAGGTGAAGCATTTTGACCATGTTGTA------ACAAAACAGTGGTAATTTAACTCTCAACCACATGTGGTT-----CTTTCTGTTCAAAGAAGTTTCTTTCATATA-GAAAAAAATAGCACTA------AAAAAATCATTTGATAA--ACATTAGCTTTTTTCCATTTCTGTGTC---------------------------TCAT-TTAAAATTGCTTCATATCATTCTGTAACTGGATAGATAAATGGTCAATAACTATGAAAATCCATGAACAGC-aaa---aatataaattttata-ttaatttCCAA---GGAGGAGGCA--CTCTATCATGATTACGGTTATAGTTCCATTCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112295644 457 - 122678785 TAAACAATTCAATGCAATTATAATATAGATTAT-----GGCTGAAAATACAATTTAAAGTATCTGAGGGAATATAATTACAA---TATAAAGGAAATGGATAG---AATGAGATATTA-AGTTGAATTTAAAGCTAAACTGAAGAATTTTTATGATG-TGTCACTCTAATGAAACAATGGTAATCTATAACTCAAATGATTGAGGTTAGTAGTTTTTCATGCATAAATTTTTCTCTTAG----AAGAAAAA--CCACCCTGCTAAAAAATAATGTTTGATAAATATATTAGTTTCTTTTTATCTG--TGTCCTATCATACTATGAATATTTGACT----------------GCCTCATATTATTCAGAAACTAGGTAGATGAGTGCTCAATAACTATAAAAATCCTTAAACAGT-AAATAGAATATAAATTTCAAAATTTGCTTCTTAGAGGATAGAGACTGTGTGTTTCATGATTATTTTCATAGCGCCAATAT i canFam3.chr1 I 212 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e saiBol1.JH378121 19437838 875 - 31320352 M a score=2522674.000000 s hg38.chr18_GL383571v1_alt 119545 260 + 198278 CAAATTGAATTTA-----------TGACATTAATAATTATCTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAGTGTTGAGCTTCCTGGCACATTAGGGAGAGAA--------------------------AGACAGCAGGCTGGGGCCAAC-GAAAGAgtcctatatttcattttaaattattac--------ctgtaccattctaaaattctccc----gaagtacact-cagagactt-aggaaaagattatatcccat s panTro5.chr18 65029572 260 + 78221452 CAAATTGAATTTA-----------TGACATTAATAATTATCTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAA--------------------------AGACAGCAGGCTGAGGCCAAC-GAAAGACTCCTatattcaattttaaattattac--------ctgtaccattctaaaattctctc----gaagtacact-cagagactt-aggaaaagattatatcccat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148672 260 + 77229886 CAAATTGAATTTA-----------TGACATTAATAATTATCTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAA--------------------------AGACAGCAGGCTGGGGCCAAC-GAAAGACTCCTatattcaattttaaattattac--------ctgtaccattctaaaattctctc----gaagtacact-cagagactt-aggaaaagattatatcccat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5368177 260 + 17472758 CAAATTGAATTTA-----------TGACATTAATAATTATCTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTTACCTAACTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAA--------------------------AGACAGCAGGCTGGGGCCAAC-GAAAGAgtcctatattcaattttaaattattac--------ctgtaccattctaaaattctccc----gaagtacact-cagagactt-aggaaaagattatatcccat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139408347 285 - 152096393 CAAATTGAATTTA-----------TGACATTAATAATTATTTTCTTTACTGATACATGGTGAAAAGTGGTAGTTCTGAGGTTATCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAAAAGACGGGAATAAGTTTTCTGTGAGGAGACAGCAGGCTGGGGCCAAC-AAAAGAATCCTATATTTAATCTTAAATTATGA---------CTGTACCATTCTAAAATTCTCCT----GAAATACACT-CAGAGACTT-AGGAAAAGATTATATCCCAT i nomLeu3.chr4 C 0 I 296 s rheMac8.chr18 57357816 274 + 70235451 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTTTGAGGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAAAAGATGGTAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------ATTCAATTTTAAATTGTTAC--------CTGTAGCATTCTAAAATTCTCCT----GAAATACACT-CGGAGACTT-AGGAAAAGATTATATCCCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63049214 274 - 75711847 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTTTGAGGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAAAAGATGGGAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------ATTCAATTTTAAATTGTTAC--------CTGTAGCATTCTAAAATTCTCCT----GAAATACACT-AGGAGACTT-AGGAAAAGATTATATCCCAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13601964 274 - 18804593 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTTTGAGGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAAAAGATGGGAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------ATTCAATTTTAAATTGTTAC--------CTGTAGCATTCTAAAATTCTCCT----GAAATACACT-CGGAGACTT-AGGAAAAGATTATATCCCAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13218867 274 + 18905526 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTCACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAAAAGGTGGGAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------attcaattttaaattgttac--------ctgtaccattctaaaattctcct----gaaatacact-cggagactt-aggaaaagattatatcccat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60048521 275 - 72318688 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTTACCTAATTTTGCTTCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAGAAAAGATGGGAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------ATTCAATTTTAAATTGTTAC--------CTGTACCATTCTAAAATTCTCCT----GAAATACACT-CGGAGACTTAAGGAAAAGATTATATCCCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 382121 274 - 1517660 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTTTGACGTTACCTAATTTTGCTCCCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACATCAGGGAGAAAAAAGATGGGAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------attcgattttaaattgttac--------ctgtaccattctaaaattctcct----gaaatacact-cggagactt-aggaaaagattatatcccat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3482445 274 + 6513552 CAAATTGAATTTA-----------CGACATTAATAATTATTTTCTTTACTGATATATGGTGAAAAGTGGTAGTTCTGAGGTCACCTAATTTTGCTCCCTGATTGGCAAGCAAAGGAAACCAGAATGTTGAGCTTCCTGGTACATCAGGGAGAGAAAAGATGGGAATAAGTTTTCTGTGAGGAGACAGCAGGATGGGGCCAAC-A------------attcaattttaaattgttac--------ctgtaccattctaaaattctcct----gaaataccct-cggagactt-aggaaaagattatatcccat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105245140 286 + 117903854 CAAATTTAATTTA-----------TGACATTAATAATTATTTTCTTTAATGATGTATAGTGAAAAGTGGTAGTTCTGAGGTTAGCTAATTTTGCTCTCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACACCAGGGAGAGAAAAGATGGGAATAAGTTTTCTATGAGGAGACAGTAGTCCAGGGCCAAC-GAAAAAGTCttatattaaattttaaattattat--------GTATTCCATGCTAAAATTCTTCT----GAAATATACT-CAAAAACTT-AAGAAAAGATTATATCCCAT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1633904 280 + 2203405 CAAATTTAATTTA-----------TGACATTAATAATTATTTTCTTTAATGATGTATAATGAAAAGTGGTAGTTCTGAGGTGAGCTAATTTTGCTCTCTGTTTGGCAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACAGCAGGGAGAGAAAAGACGGGAACAAGTTTTCTGTAAGGAGAGAGTAGTCCGGGGCCAACAAAAAAAATCTTATA-------TTAAATTATTAC--------CTGTTCCATGCTAAAATTCTTCT----GAAATATACT-CAAAAATTT-AAGAAAAGATTACATCCCAT i cebCap1.NW_016107689v1 I 323 C 0 s aotNan1.NW_018502140v1 3585799 286 - 14941987 CAAATTTAATTTA-----------TGACATTAATAATTATTTTCTTTAATGATGTATAATGAAAAGTGGCAGTTCTGAGGTTAGCTAATTTTGCCCTCTGTTTGGTAAGCAAAAGAAACCAGAATGTTGAGCTTCCTGGCACACCACAGAGAGAAAAGATGGGAACAACATTTCTGTAAGGAGACAGTAGTCCAGGGCCAAC-GAAAAAgtctcatattaaattttaaattattac--------ctgttccatgctaaaattcttct----gaaatatgct-caaaaactt-aagaaaagattatatcccat i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11227072 301 - 20685099 CTAACTGAATTAATTTAGATATGTTGACCCTAAAGATTATTTTTTTCCACGATGTATGATGTGAAGTAGAAGGTCTAAGATTAGCTCATTTTACCTTCTCTTTGACATAGAAAAGCAAATGGAATTTTGAGACCTCTGGGACGGTGCAGAAAATGAAGATGGGAATAAGAGCTCTGTAACAAGACTACAGGCCA-GGCCAGA-GAAAGAGCCTCACATTCAGTCTTAAATCATTCC--------CTGCACCATGCTAAAATACTCCTCAAAGAAATACACTGAAAAGAGTT-AAGAAAAGATTATATCACAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112296101 297 - 122678785 Ctaaattaattaatataaaa----tgacattataaattattttCTCTGCTGAT-CCTGATGTGCAGTGTCAGTTCTGAAGTTAGCTGATGTTGCCTTCTGTTTGGCATGCAAAAGAGACTGGAATTTTGAGTTCTCTGGCAC-CCAGGAAGAAGGAAGATAG-AAGAAGTTTTCTGTCAGGAGACAACAGCTGGGGGCCAAA-A-AAGCATCTCTTATTCATTTTCAACTTATTGCTAAGTACTCTGTACCATGCAAAAATTCTCCT----GAAGTAAACC-CAAAAAGTC-AAGAAAATATTACATTACAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e saiBol1.JH378121 19437838 875 - 31320352 M a score=1836141.000000 s hg38.chr18_GL383571v1_alt 119805 182 + 198278 cacgatcttttatta------------------------------atggttccttggagaattgagagaaga-ttttgtccaagtttgaaacaaatcatgcagagggaaaatatcaggatgca-gTGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGAGAGAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA s panTro5.chr18 65029832 180 + 78221452 cacgatcttttatta------------------------------atggttcattggagaaatgagagaagt-ttttgtccaagtttgaaacaaatcatgcagagggaaaatatcaggatgca-gtgtacaagaaaaattagcaagagcgataaagtgaaggcaggagagagg-----ccacattgcaa----cctgaaaaaca--taagaatcccagtggaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64148932 180 + 77229886 cacgatcttttatta------------------------------atggttcattggagaattgagagaaga-ttttgtccaagtttgaaacaaatcatgcagagggaaaatatcaggatgca-gtgtacaagaaaaattagcaagagcgataaagtgaaggcaggagagagg-----ccacattgcaa----cctgaaaaaca--taagaatcccagtggaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5368437 182 + 17472758 cacgatcttttatta------------------------------atggttcattggagaattgagagaaga-ttttgtccaagtttgaaacaaatcatgcagagggaaaatatcaggatgca-gTGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGAGAGAGG-----CCACATTGCAA----CCTGAAAAACGGATAAGAATCCCAGTGGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139408928 182 - 152096393 CACGATCTTTTATTA------------------------------ATGGTTCATTGGAGAATTGAGAGAAGA-TTTTGACCAAGTTTGAAACAAATCATGCAGAAGGAAAATATCAGGATGCA-ATGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGAGAGAGG-----CCACATTGCAA----CCTGAATAACAGATAAGAATCACAGTGAAA i nomLeu3.chr4 I 296 C 0 s rheMac8.chr18 57358090 182 + 70235451 CATGATCTTTTATTA------------------------------ATGGTTCTTTGGAGAACTGAGAGAAGA-TTTTGTCCAAGTTTGAAACAAATCATGCAGAGGGAAAGTATCAGGATGCA-ATGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGCGACAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63049488 182 - 75711847 CATGATCTTTTATTA------------------------------ATGGTTCTTTGGAGAACTGAGAGAAGA-TTTTGTCCAAGTTTGAAACAAATCATGCAGAGGGAAAGTATCAGGATGCA-ATGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGCGACAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13602238 182 - 18804593 CATGATCTTTTATTA------------------------------ATGGTTCTTTGGAGAACTGAGAGAAGA-TTTTGTCCAAGTTTGAAACAAATCATGCAGAGGGAAAGTATCAGGATGCA-ATGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGCGACAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13219141 182 + 18905526 catgatctttcatta------------------------------atggttctttggagaactgaaagaaga-ttttgtccaagtttgaaacaaatcatgcagagggaaagtatcagGATGCA-ATGTACAAGAAAAAATAGCAATAGCGATAAAGTGAAGGCAGGCGACAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60048796 182 - 72318688 CATGATCTTTTATTA------------------------------ATGGTTCTTTGGAGAACTGAGAGAAGA-TTTTGTCCAAGTTTGAAACAAATCATGCAGAGGGAAAGTATCAGGATGCA-ATGTACAAGAAAAATTAGCAATAGCGGTAAAGTGAAGGCAGGCGACAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 382395 182 - 1517660 catgatcttttatta------------------------------atggttctttggagaactgagagaaga-ttttgtccaagtttgaaacaaatcatgcagagggaaagtatcagGATGCA-ATGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAAGCAGGCGACAGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3482719 182 + 6513552 catgatcttttatta------------------------------atggttctttggagaagtgagagaaga-ttttgtccaagtttgaaacaaaTCATGCAGAAGAAAAGTATCAGGATGCA-ACGTACAAGAAAAATTAGCAATAGCGATAAAGTGAAGGCAGGCGACAGG-----CCACGTTGCAA----CCTGAAAAACATTTAAGAGTCCCAGTGGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105245426 183 + 117903854 CACAATATTTTATTA------------------------------ATGGTTTATTGGAGAATTGAGGGAAGATTTTTCTACAAATTTGAAACAAATCATGCA-ATAAAAAATATCAAGATGCAAATGCACAAGAAAAATCAGCAATAGTGATAAAGTGAAGGCAGAAGAGGGG-----CCACTTTACAG----CCTGAAAAACAAATAAGAATCCCAGTGGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19438722 158 - 31320352 CACAATCTTTTATTA--------------------------------GGCTTATCGGAGAATTGAGGGAAGATTTTTGTACAAATTCGAAACAAATCATGAA-ATGGAAAATATCAGGATGCAGATGCACAAGAAAAATTAGCAATAGTGATAAAGTGAAGGCAGAAGAGGGG-----CCACATTGCAA----CC-----------------------TGGAA i saiBol1.JH378121 M 875 C 0 s cebCap1.NW_016107689v1 1634184 181 + 2203405 CACAATCTTTTATTA--------------------------------GGTTTATTGGAGAATTAAGGGAAGATTTTTGTACAAATTTGAAACAAATCATGCA-ATGGAAAATATCAGGATGCAGATGCACAAGAAAAATTAGCAATAGTGATAAAGTGAAGGCAGAAGAGGGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3586085 182 - 14941987 cacaatcttttatta------------------------------atggtttattggacaattgaggggagATTTTTGTTCAAATTTGAAACAAATCATGCA-ATGGAAAATATCA-GATGCAAATGCACAAGAAAAATTAGCAATAGTGATAAAGTAAAGGCAGAAGAGGGG-----CCACATTGCAA----CCTGAAAAACAGATAAGAATCCCAGTGGAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11227373 207 - 20685099 CATGCTCTTTTATTATAATAAAAGATCTTTATTATAACCATTATGATGGTTCATTAAAGAATTGAGTAAAGA-TTTTGTCCAAGTTTGAAAGAAA-----AGGAGGAAAAGTACCAGGCTGCGGATGTATAGGTAAGATAAGCAACTCTGGGACAGAGATAGCAGAAGAGGAC-----AGTAATTACAA----CCCCCAC-ACAGACAAGAATCCCCATGGAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112296398 192 - 122678785 TATGATCCTTCATTA------------------------------ACGGTGCACAAGAATATTGAGGGAAGA-TTCTATCCAAGTTTAGGACAAATCAACCAGAAAAAAAATGTCAAGCTGTGGACGTGCAGATAAGATTATTAACTATTACCAAGAGAAGGCAGAAGAGGTGAGATCTCTCCtcacaaggatccttaaaagtggaaaaggctgacagaggga i canFam3.chr1 C 0 I 153 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I a score=3345581.000000 s hg38.chr18_GL383571v1_alt 119987 325 + 198278 TCCTGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAGATCTCAGGTGTTATAGGGTGTCAGAAGTCAAATTATGTGTTTGTATTTT-AAAAATGAATAACCCCAAAATGCTGGATATCATAAGAATTTCAATACAGGAACATCTTCATGCATGCCCGAACATCTAGCTCTA---AAGTTGGAATGTTTAAATCCCATGAATATATATTGTGAAGATAATTTTAGCATATTAAATACAGAGCCAGAA---TTAATCAGAATACTGGGCTGAAGCCCTGGATTTTTCTAAACCTGTGACATGGGACAAGTCTCTGGGTCTCCATTTGTTTTAT s panTro5.chr18 65030012 325 + 78221452 tcctGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAGATCTCAGGTGTTATAGGGCGTCAGAAGTCAAATTATGTGTTTGTATTTT-AAAAATGAATAACCCCAAAATGCTGGATATCATAAGAATTTCAATATAGGAACATCTTCATGCATGCCCGAACATCTAGCTCTA---AAGTTGGAATGTTTAAATCCCATGATTATATATTGTGAAGATAATTTTAGCATATTAAATACAGAGCCAGAA---TTAATCAGAATACTGGGCTGGAGCCCTGGATTTTTCTAATCCTGTGACATGGGACAAGTCTCTGGGTCTCCATTTATTTTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64149112 325 + 77229886 tcctGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAGATCTCAGGTGTTATAGGGCGTCAGAAGTCAAATTATGTGTTTGTATTTT-AAAAATGAATAACCCCAAAATGCTGGATATCATAAGAATTTCAATATAGGAACATCTTCATGCATGCCCGAACATCTAGCTCTA---AAGTTGGAATGTTTAAATCCCATGATTATATATTGTGAAGACAATTTTAGCATATTAAATACAGAGCCAGAA---TTAATCAGAATACTGGGCTGGAGCCCTGGATTTTTCTAATCCTGTGACATGGGACAAGTCTCTGGGTCTCCATTTATTTTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5368619 325 + 17472758 TCCTGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAGATCTCAGGTGTTACAGGGCATCAGAAGTCAAATTATGTGTTTGTATTTT-AAAAATGAATAACCCCAAAATGCTGGATATCATAAGAATTTCAATATAGGAACATCTTCATGCATGCCCGAACATCTAGCTCTA---AAGTTGGAATGTTTAAATCCCATGAATATATATTGTGAAGATAATTTTAGCATATTAAATACAGAGCCAGAA---TTAATCAGAATACTGGGCTGAAGCCCTGGATTTTTCTAATCCTGTGATATGGGACAAGTCTCTGGGTCTCCATTTATTTTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139409110 324 - 152096393 TCCTGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAGATCTCAGGTGTTATAGGGCGTCAGAAGTCAAATTATGTGTTCGTACTTT-AAAAATGAATAACCCCAAAATGCTAGATATCATAAGAATTTCAACACAGGAACGTCTTCATGCATGCCCAAACATCTAGCTCTA---AAATTGGAATG-TTAAATCCCATGAATATATATCGTGAAGATAATTTTAGCATATTAAATACAGAGCCAGAA---TTAATCAGAATACTGGGCTGAAGCCCTGGATTTTTCTAATCCTGTGACATGGGACAAGTCTCTGAATCTCCATTTCTTTTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57358272 323 + 70235451 ACCTGTGAGAATCCT-AG-AAAATC-AAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAATCAAATTATGTGTTTGCATTTT-AAAAATGTATAACCCCGAAGTGCTGGATATCATAAGAATTTCAATATAGAAACCTCTTCCTGCATGCCCGAACATCTAGCTCTA---AAATTGGAATGTTTGAATCCCATGAATATATATCATGAagacaattttggcatattaaatacagaaccagaa----taatcagaatactgggctgaagtcctggatttttctaatcctgtgacatgagacaagtctctgagtctccatttcttttac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63049670 323 - 75711847 ACCTGTGAGAATCCT-AG-AAAATC-AAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAATCAAATTATGTGTTTGCATTTT-AAAAATGTATAACCCCAAAGTGCTGGATATCATAAGAATTTCAATATAGAAACCTCTTCCTGCATGCCCGAACATCTAGCTCTA---AAATTGGAATGTTTGAATCCCATGAATATATATCATGAAGACAATTTTGGCATATTAAATACAGAACCAGAA----TAATCAGAATACTGGGCTGAAGTCCTGGATTTTTCTAATCCTGTGACATGAGACAAGTCTCTGAGTCTCCATTTCTTTTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13602420 323 - 18804593 ACCTGTGAGAATCCT-AG-AAAATC-AAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAATCAAATTATGTGTTTGCATTTT-AAAAATGTATAACCCCAAAGTGCTGGATATCATAAGAATTTCAATATAGAAACCTCTTCCTGCATGCCCGAACATCTAGCTCTA---AAATTGGAATGTTTGAATCCCATGAATATATATCATGAagacaattttggcatattaaatacagaaccagaa----taatcagaatactgggctgaagtcctggatttttctaatcctgtgacatgagacaagtctctgagtctccatttcttttac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13219323 325 + 18905526 ACCTGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAATCAAATTATGTGTTTGCATTTT-AAAAATGTATAACCCCAAAGTGCTGGATATCATAAGAATTTCAATATAGAAACATCTTCCTGCATGCCCGAACATCTAGCTCTA---AAATTGGAATGTTTGAATTCCATGAATATATATCATGAagacaattttggcatattaaatacagaaccagaa---ttaatcagaatactgggctgaagtcctggatttttctaatcctgtgacatgagacaagtctctgagtctccatttcttttac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60048978 325 - 72318688 ACCTGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAGTCAAATTATGTGTTTGCATTTT-AAAAATGTATAACCCCAAAGTGCTGGATATCATAAGAATTTTAATATAGAAACATCTTCCTGCATGCCCGAACATCTAGCTCTA---AAATTGGAATGTTTGAATCCCATGAATATATATCATGAAGACAATTTTGGCATATTAAATACAGAACCAGAA---TTAATCAGAATACTGGGCTGAAGTCCTGGATTTTTCTAATCCTGTGACATGAGACAAGTCTCTGAGTCTCCATTTCTTTTAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 382577 325 - 1517660 ACCTGTGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAATCAAATTATGTGTTTGCATTTT-AAAAATGTATAACCCCAAAGTGCTGGATATCATAAAAATTTCAATATAGAAACATCTTCCTGCATGCCCGAACATCTAGCTCTA---AAATTGGAATGTTTGAATCCCATGAATATATATCATGAagacaattttggcatattaaatacagaaccagaa---ttaatcagaatactgggctgaagtcctggatttttctaatcctgtgacatgagacaagtctctgagtctccatttcttttac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3482901 324 + 6513552 TCCTATGAGAATCCT-AG-AAAATCAAAAGAAATTCTGAAATCTCAGGTGTTATAGGGCATCAGAAGTCAAATTATGTGTTTGTATTTT-AAAAATGAATAACCCCAAAATGCTGGATATCGTAAGAATTTCAATATAGAAACATCTTCCTGCATGCCCGAACATCTAGCTCTA---AAACTGGAATGTTTGAATCCCATGAATATATATCATGAAGACAATTTtggcatattaaacacagaaccagca---ttaatcagaa-actgggctgaagtcctggattttcctaatcctgtgacatgggacaagtctctgagtctccatttcttttac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105245609 327 + 117903854 TCCTGCCGGAATCCTGAGAAAAATCAAAAAAAATTCTGAGATCACAGGTGTTACAGGGCATCAGAAGTCAAATTCTGCATTTGTATTTT-AAAAATGGATAACCCCACAACACAAGATATCATAAGAATTTCACTACAGGAACATCTTCATCCATACCCAAACATCTAGTTCTA---AAATTGGAATGTTTAAGTCCCATGAATATATATCACGAAGATAATTTTGGCATATTAAATACAGAGCCAGAA---TTAATCAGAATACTGGGCTGAAGACCTGGGTTTTTCTAATCCTGTGACATGAGACAAGTCTCTGAGTCTCCATTTCTTTTAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19438880 326 - 31320352 TCCTGTGGGAATCCTGAG-AAAATCAAAAGAAATTCTGAGATCACAGGTGTTACAGGGCATCAGAAGTCAAATTATGCATTTGCATTTT-AGAAATGGATAACCCCACAACACTGGATATCATAAGAATTTCACTATAGGAACATCTTCATCCATACCCAAACATCTAGCTCTA---AAATTGGAATGTTTAAGTCCCATGAATATATATCACAAAGATAATTTTGGCATATTAAATACAGAGCCAGAA---TCAGTCAGAATACTGGGCTGAAGTCTTGGATTTTTCTAACCCTGTGACAAGAGACAAGTCTCTGAGTCTCCATTTCTTTTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1634365 297 + 2203405 TCCTGTGGGAATCCTGAG-AAAATCAA-----------------------------GGCATCAGAGGTCAAATTATGCATTTGTATTTTAAAAAATGGATAACCCCACAACACCGGATATCGTAAGAATTTCACTATAGGAACATCTTCATCCATATCCAAACATCTAGGTCTA---AAATTGGAATGTTTCAGTCCCATGAATATATATCACAAagataa-tttggtatattaaatactgagccagaa---ttaatcagaatactgggctgaagtcctggatttttctaatcctgtgacatgagacaagtctctgagtctccatttcttttac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3586267 329 - 14941987 TCCTGTGGGAATCCTGAG-AAAATCAAAAGAAATTCTGAGATCACAGATGTTACAGGGCATCAGAAGTCAAATTATGCATTTGTATTTT-AAAAATGGATAACCCCACAACACCGGATATCATAAGAATTTCACTATAGGAACATCTTCATCCATACCCAAACATCTAGCCCTAAGGAAACTGGAATGTTTAAGTCCCATGAATATATATCACAAAGATAATTTTGGCATATTAAATACAGAGCCAGAA---TTAATCACAATACTGGGCTGAAGTCCTGGATTTTTCTAATCCTGTGACATGAGATAAGTCTCTAAGTCTCCATTTCTTTTAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11227580 321 - 20685099 TCCTGTGTGAATCTTCAG-AAAATCATGAGAAACCTGGGGAACATCAATATT-----GTATCAGAAGTCAAATTATGTATTTGTGCTTA-AAGTATTAATAAACTCATA-CACTGGATATCTTAA-ATTTTCACCACGGAAACATCTTCATGAAAGCCCAAATATGTAGCTTTA---AAATTGG-ATGTTTAATTCTTGTGAATATCTATCATGAAGTTAATTTTGGCATATTAAATACTGAGCCAGAGTTGTTAATCAGAATACTGGGCTAACATCCTGGATTATTTCAATTCTGGGACATGGAACAAATCTCTGAGCCTGTATTTCTTTGAT i otoGar3.GL873546 C 0 I 122 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112296590 153 - 122678785 I a score=11124964.000000 s hg38.chr18_GL383571v1_alt 120312 1154 + 198278 TATGAATACTTACTATACTAgcttgcaatctgccagctgctattctatgggctttacatattaaacttaac-ttttacaacaaccctatggaaggttctgttattataatccttttacatcttgaagggaatgaggcacagaaatattaagtaactggccagaagtcatgcaatgttagtacattgtagtggcaggatttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTGTCTTTCTTTACCTCAGCAAACTTTTGCAGAGCTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATaattctaaagtaaattctaaagtaaaAAGGCTTTCT-AAACTCACCTTAAACATAGATAACATGTTTCTTTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGTTATTAACACATTTATAAATATTCAGATAATTATTTTTACTCTTCCCTTAAGCATTTTGCATAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGCAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTGGAGAAATGGTGGGTCAGATTATTTGGATAATTAGTTCCTACAATTCAATTTAATGGCATATGCTCCATCTATTTCCTAACATATTTAGAAATGTTTCCAACTCAATGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTATATAATATTACCAGGTCTTATAA------GTGACTTTAATAAATTTCT----------------------------T-------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------G--------------------------------------------------------ATGTTTATTAAAATGACTAGTCTGTTGGACAGCAGAGAGAGGAATGTTTCTAACTCACTGCTGTGGTTTCCATGAGGAGGGGTTTTTACTTGCTCTCCTCTTACCTCTTTCCACGGGGGCAAAGTTACCTGCTGATAAATATAGAGGGGAACTGCCAAATAGTCTAGACTCCAGTCCTGATGTTTCTTGGGAATCAGCCTTACCTGAGAGTAAGATTAAGTGTTCTAATCCATGCCTCCAGGTTAAGAGTACTGTAAGGACAGATTTCCATGtgcggtttccagcaccacttggggctgggtgggaaactttgccaaaatctactcttaagtattagggagtt s panTro5.chr18 65030337 1154 + 78221452 TATGAATACTTACTATACTAgcttacaatctgccagctgctattctatgggctttacatattaaacttaac-ttttacaacaaccctatggaaggttctgttattataatccttttacgtcttgaagggaatgaggcacagaaatattaagtaactggccagaagtcatgcaatgttagtacattgtagtggcaggatttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTGTCTTTCTTTACCTCAGCAAACTTTTGCAGAGCTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATaattctaaagtaaattctaaagtaaaAAGGCTTTCT-AAACTCACCTTAAACATAGATAACATGTTTCTTTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGTTATTAACACATTTATAAATATTCAGATAATTATTTTTACTCTTCCCTTAAGCATTTTGCATAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGCAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTGGAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTAATGGCATATGCTCCATCTATTTCCTAACATATTTAGAAATGTTTCCAACTCAATGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTATATAATATTACCAGGTCTTATAA------GTGACTTTAATAAATTTCT----------------------------T-------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------G--------------------------------------------------------ATGTTTATTAAAATGACTAGTCTGTTGGACAGCAGAGAGAGGAATGTTTCTAACTCACTGCTGTGGTTTCCATGAGGAGGGTTTTTTACTTGCTCTCCTCTTACCTCTTTCCACGGGGGCAAAGTTACCTGCTGATAAATGTAGAGGGGAACTGCCAAATAGTCTAGACTCCAGTCCTGATGTTTCTTGGGAATCAGCCTGACCTGAGAGTAAGATTAAGTGTTCTAATCCATGACTCCAGGTTTAGAGTACTGTAAGGACAGATTTCCATGtgcggtttccagcaccacttggggctgggtgggaaactttgccaaaatctactcttaagtattagggagtt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64149437 1154 + 77229886 TATGAATACTTACTATACTAgcttacaatctgccagctgctattctatgggctttacatattaaacttaac-ttttacaacaaccctatggaaggttctattattataatccttttacgtcttgaagggaatgaggcacagaaatattaagtaactggccagaagtcatgcaatgttagtacatcgtagtggcaggatttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTGTCTTTCTTTACCTCAGCAAACTTTTGCAGAGCTCCCAAAGAATGCATGGTGATATATTTTACAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATaattctaaagtaaattctaaagtaaaAAGGCTTTCT-AAACTCACCTTAAACATAGATAACATGTTTCTTTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGTTATTAACACATTTATAAATATTCAGATAATTATTTTTACTCTTCCCTTAAGCATTTTGCATAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGCAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTGGAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTAATGGCATATGCTCCATCTATTTCCTAACATATTTAGAAATGTTTCCAACTCAATGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGATAGCTAAACTACTATATAATATTACCAGGTCTTATAA------GTGACTTTAATAAATTTCT----------------------------T-------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------G--------------------------------------------------------ATGTTTATTAAAATGACTAGTCTGTTGGACAGCAGAGAGAGGAATGTTTCTAACTCACTGCTGTGGTTTCCATGAGGAGGGTTTTTTACTTGCTCTCCTCTTACCTCTTTCCACGGGGGCAAAGTTACCTGCTGATAAATCTAGAGGGGAACTGCCAAATAGTCTAGACTCCAGTCCTGATGTTTCTTGGGAATCAGCCTGACCTGAGAGTAAGATTAAGTGTTCTAATCCATGACTCCAGGTTTAGAGTACTGTAAGGACAAATTTCCATGtgcggtttccaacaccacttggggctgggtgggaaactttgccaaaatctactcttaagtattagggagtt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5368944 1154 + 17472758 TATGAATACTTACTATACTAgcttacaatctgccagctgctattctatgggctttacatattaaacttaac-ttttacaacaaccctatggaaggttctgttattataatccttttacatcttgaagggaatgaggcacagaaatattaagtaactggccagaagtcatgcaatgttagtacattgtagtggcaggacttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTGTCTTTCTTTACCTCAGCAAACTTTTGCAGAGCTCCCGAGGAATGCATGGTGATATATTTTACAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATaattctaaagtaaattctaaagtaaaAAGGCTTTCT-AAACTCACCTTAAACATAGATAACATGTTTCTTTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGTTATTAACACATTTATAAATATTCAGATAATTATTTTTACTCTTCCCTTAAGCATTTTGCATAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGTAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTAGAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTAATGGCATATGCTCCATCTATTTCCTAACATATTTAGAAATGTTTCCAACTCAATGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTATATAATATTACCAGGTCTTATAA------GTGACTTTAATAAATTTCT----------------------------T-------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------G--------------------------------------------------------ATGTTTATTAAAATGACTAGTCTGTTGGACAGCAGAGAGAGGAATGTTTCTAACTCACTGCTGTGGTTTCCATGAGGGGGGGTTTTTACTTGCTCTCCTCTTACCTCTTTCCACGGGGGCAAAGTTACCTGCTGATAAATCTAGAGGGGAACTGCCAAATAGTCTAGACTCCAGTCCTGATGTTTCTTGGGAATCAGCCTGACCTGAGAGTAAGATTAAGTGTTCTAATCCATGACTCCAGGTTAAGAGTACTGTAAGGACAGATTTCCATGtgcggtttccagcaccacttggggctgggtgggaaactttgccaaaatctactcttaagtattagggagtt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139409434 1144 - 152096393 TATGaacacttattatactagcttacaatctgccagctgctattctatgggctttacatactaaacttaac-ttttacaacaaccctatggaaggttctgttcttataatccttttacatcttgaagggaatgaggcacagaaatattaagtaattggcctgaagtcatgcaatgttagtacattgtagtggcaggatttgaacttaggaagtttggctgcagCCAACTGGAAATCATTTCCTGCTTGTCTTTCTTTACCTCAACAAACTTTTGCAGAGCTCCCAAGGAATGCATGGTGATCTATTTTACAATGCTTAGTCCAGTTCCATCCCTGATCTCGAAGAGCACATAATTCTAAAGTAAATTCTGAAGTAAAAAGGCTCTTTAAAACTCACCTTAAACATAGATAACATGTTTCTTTGGAAACATACTTAGCAATTTATAGATA-------AAAGGAAAATGATGTTATTAACATATTTATAAATATTCAGATTATTACTTTTATTCTTCCCTTAAGCATTTTGCAAAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGTGGCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTACTGGCATACGCTCCATCTATTTCCTAACATACTTAGAAATGTTTCCAATTCAATGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTATATAATGTTACCAGGTCTTATAA------GTGACTTTAATAAATTTCT----------------------------T-------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------G--------------------------------------------------------ATGTTTATTAAAATGACTAGTCTGTTGGACAGC--agagaggaatgtttctaactcactgctgtggtttccatgaggaggggtttttacatgctctgctcttacctctttccacgggggcaaagttacctgctgataaatctagaggggaactgccaaatagtctagactccagtcctgatgtttcttgggaatcagcctgacctgagagtaagattaagtgttctaatccatgcctccaggtt--gagtactgtaagggcagatttccatgtgcggtttccagcaccacttggggctgggtgggaaactttgccaaaatctagtcttaagtattagggagct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57358595 1231 + 70235451 tatgaacacttattataatagcttataatctgccagctgctattccatgggctttacaaattaaacttaac-ttttataacaaccctatggaaggttctgttattagaatccttttacatcttgaagggaatgaagtgcaaaaatactaagtaact-gcctgaagtcatgcagtgttagtacattgtagtggcaggatttgaacataggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTATCTTTCTTTACCTCAACAAACCTTTGCAGAACTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCACAGTTCCATCCCTGATGTCGAAGTGTACATaattctaaagtaaattctaaagtaaaAAGGGTCTCTAAAACTCACCTTAAACATAGATAACATGTTTCTGTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGCTATTAACATATTT----ATATTCAGATAATTATTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGCATCTTGTATGAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATCATTACTTCCTACAATTCAATTTACTGGCGTATGCTCCATCTATTTCCTAACATACTTTGAAATGTTTCCAACTCATTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTGTATAATGTTACCAGGTCTTATAA------TTGACTTTAATAAACTTCTAAAAATTTGTATTTT-TTCAAAGATAAAT-------------------------------------------------------------------------------------------------------A------------------------------------------------TTTTGTCTATCCTATCCACAGCTGG------------------------TTTTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATTAAAATGACTAGTCTGTTGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGAGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACAGGGGCAAAGTTACCTGCTGATAAATCTAGAGGCGAACTGCCAAAGAGTCTAGACTCCAGTCCTGATGTtttttgggaatcagcctgacctgagagtgagattaagtgttctaatccatgcctccaggttaagagtactgtaaggacagatttccatgtgcggtttccagcaccacctggggctgggtgggaaactttgctgaaacccagtcttaagtattagggagtt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63049993 1231 - 75711847 TATGaacacttattataatagcttataatctgccagctgctattccatgggctttacaaattaaacttaac-ttttataacaaccctatggaaggttctgttattagaatccttttacatcttgaagggaatgaagcgcaaaaatactaagtaact-gcctgaagtcatgcagtgttagtacattgtagtggcaggatttgaacataggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTATCTTTCTTTACCTCAACAAACCTTTGCAGAACTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCACAGTTCCATCCCTGATGTCGAAGTGTACATaattctaaagtaaattctaaagtaaaAAGGCTCTCTAAAACTCACCTTAAACATAGATAACATGTTTCTGTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGCTATTAACATATTT----ATATTCAGATAATTGTTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATACATAAGGCAACTTGTATGAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATCATTACTTCCTACAATTCAATTTACTGGCGTATGCTCCATCTATTTCCTAACATACTTTGAAATGTTTCCAACTCATTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTGTATAATGTTACCAGGTCTTATAA------TTGACTTTAATAAACTTCTAAAAATTTGTATTTT-TTCAAAGATAAAT-------------------------------------------------------------------------------------------------------A------------------------TTTTGTCTATCCTATCCACAGCTG------------------------G------------------------TTTTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATTAAAATGACTAGTCTGTTGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGAGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACAGGGGCAAAGTTACCTGCTGATAAATCTAGAGGCGAACTGCCAAAGAGTCTAGACTCCAGTCCTGATGTTTCTTGGGAATCAGCCTGACCTGAGAGTGAGATTAAGTGTTCTAATCCATGCCTCCAGGTTAAGAGTACTGTAAGGACAGATTTCCATGtgcggtttccagcaccacctggggctgggtgggaaactttgctgaaacccagtcttaagtattagggagtt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13602743 1231 - 18804593 tatgaacacttattataatagcttataatctgccagctgctattccatgggctttacaaattaaacttaac-ttttataacaaccctatggaaggttctgttattagaatccttttacatcttgaagggaatgaagcgcaaaaatactaagtaact-gcctgaagtcatgcagtgttagtacattgtagtggcaggatttgaacataggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTATCTTTCTTTACCTCAACAAACCTTTGCAGAACTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCACAGTTCCATCCCTGATGTCGAAGTGTACATaattctaaagtaaattctaaagtaaaAAGGCTCTCTAAAACTCACCTTAAACATAGATAACATGTTTCTGTGGAAACATACTTAGCAATCTATAGATCTTAGTATAAAGAAAAATGATGCTATTAACATATTT----ATATTCAGATAATTATTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATACGTAAGGCATCTTGTATGAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATCATTACTTCCTACAATTCAATTTACTGGCGTATGCTCCATCTATTTCCTAACATACTTTGAAATGTTTCCAACTCATTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTGTATAATGTTACCAGTTCTTATAA------TTGACTTTAATAAACTTCTAAAAATTTGTATTTT-TTCAAAGATAAAT-------------------------------------------------------------------------------------------------------ATTTTGTCTATCCTATCCACAGCTG------------------------------------------------G------------------------TTTTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATTAAAATGACTAGTCTGTTGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGAGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACAGGGGCAAAGTTACCTGCTGATAAATCTAGAGGCGAACTGCCAAAGAGTCTAGACTCCAGTCCTGATGtttcttgggaatcagcctgacctgagagtgagattaagtgttctaatccatgcctccaggttaagagtactgtaaggacagatttccatgtgcggtttccagcaccacctggggctgggtgggaaactttgctgaaacccagtcttaagtattagggagtt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13219648 1233 + 18905526 tatgaacacttattataatagcttataatctgccagctgctattccatgggttttacaaattaaacttaac-ttttataacaaccctatggaaggttctgttattagaatccttttacatcttgaagggaatgaagcgcaaaaatactaagtaactggcctgaagtcatgcagtgttagtacattgtagtggcaggatttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTATCTTTCTTTACCTCAACAAACCTTTGCAGAACTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCACAGTTCCATCCCTGATGTCGAAGTACACATaattctaaagtaaattctaaagtaaaAAGGCTCTCTAAAACTCACCTTAAACATAGATAACATGCTTCTGTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGCTATTAACATATTT----ATATTCAGATAATTATTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATACGTAAGGCATCTTGTATGAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTACTGGCGTATGCTCCATCTATTTCCTAACATACTTTGAAATGTTTCCAACTCATTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAAACAGCTAAACTACTGTATAATGTTACCGGGTCTTATAA------TTGACTTTAATAAACTTCTAAAAACTTGTATTTTATTCAAAGATAAAT-------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------TTTTGTCTATCCTATCCACAGCTGGTTTTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATTAAAATGACTAGTCTGTTGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGTGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACAGGGGCAAAGTTACCTGCTGATAAATCTAGAGGCGAACTGCCAAAGAGTCTAGACTCCAGTCCTGATGtttcttgggaatcagcctgacctgagagtgagattaagtgttctaatccatgcctccaggttaagagtactgtaaggacagatttccatgtgcggtttccagcaccacttggggcggggtgggaaactttgccgaaacccagtcttaagtattagggagtt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60049303 1208 - 72318688 TATGaaaacttattagaatagcttataatctgccagctgctattccatgggcttgacaaattaaacttaac-ttttataacaaccctatggaaggttctgttattataatccttttacatcttgaagggaatgaagcgcaaaaatactaagtaactggcctgaagtcatgcagtgttcgtacattgtagtggcaggatttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTATCTTTCTCTACCTCAACAAACCTTTGCAGAACTCCCAAGGAATGCATGGTGATATATTTTACAATGGCTAGCACAGTTCCATCCCTGATCTCGAAGTGCACATaattctaaagtaaattctaaagtaaaAAGGCTCTCTAAAACTCACCTTAAACATAGATAACATGTTTCTGTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGTTATTAACATATTT----ATATTCAGATAATTATTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGCATCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGCTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTACTGGCGTATGCTCCATCTATTTCCTAATATACTTTGAAATGTTTCCAATTCATTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTGTATAATGTTACCAGGTCTTATAATTGACTTTGACTTTAATAAATTTCTAAAAATTTGTATTTTATTCAAAGATAAAT-----------------------------------------------------------------------------ATTTTGTCTATCCTATCCACAGCTGGT------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATTAAAATGACTAGTCTGTTGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGAGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACATGGGCAAAGTTACCTGCTGATAAATCTAGAGGCGAACTGCCAAATAGTCTAGACTCCAGTCCTGATGTTTC-----------------------------TTAAGTGTTCTAATCCATGCCTCCAGGTT--GAGTACTGTAAGGACAGATTTCCATGtgcagtttccagcaccacttggggctgggtgggaaactttgccgaaacccagtcttaagtattagggagtt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 382902 1232 - 1517660 tatgaacacttattataatagcttataatctgccagctgctattccatgggctttacaaattaaacttaac-ttttataacaaccctatggaaggttctgttattagaatccttttacatcttgaagggaatgaagcgcaaaaatactaagtaactggcctgaagtcatgcagtgttagtacattgtagtggcaggatgtgaacttaggaagtttggctccaACTAACTGGAAATAATTTCCTGCTTATCTTTCTTTACCTCAACAAACCTTTGCAGAACTCCCAAGGAATGCATGGTGATATATTTTACAATGGTTAGCACAGTTCCATCCCTGATGTCGAAGTGCACATaattctaaagtaaattctaaagtaaaAAGGCTCTCTAAAACTCACCTTAAACATAGATAACATGTTTCTGTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGCTATTAACATATTT----ATATTCAGATAATTATTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATACGTAAGGCATCTTGTATGAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTACTGGCGTATGCTCCATCTATTTCCTAACATACTTTGAAATGTTTCCAACTCATTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCTAAACTACTGTATAATGTTACTGGGTCTTATAA------TTGACTTTAATAAACTTCTAAAAATTTGTATTTTATTCAAAGATAAAT-----------------------------------------------------------------------------ATTTTGTCTATCCTATCCACAGCTGGT------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATTAAAATGACTAGTCTG-TGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGAGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACAGGGGCAAAGCTACCTGCTGATAAATCTAGAGGCGAACTGCCAAATAGTCTGGACTCCAGTCCTGATGtttcttgggaatcagcctgacctgagagtgagattaagtgttctaatccatgcctccaggttaagagtactgtaaggacagatttccatgtgcggtttccagcaccacttggggctgggtgggaaactttgtcgaaacccagtcttaagtattagggagtt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3483225 1232 + 6513552 tatgaacacttattttaatagcttacaatctgccagctgctattccatgggctttacaaattaaatttaac-ttttacaacaaccctatggaaggttctgttattataatccttttacatcttgaagagaatgaagcgtaaaaatattaagtaactggcctgaagtcatgcaatattagtacattgtagtggcaggatttgaacttaggaagtttggctccaACCAACTGGAAATAATTTCCTGCTTATCTTTCTTTACCTCAACAAACCTTTGCAGAACTCCCAAAGAATGCATGGTGATATATTTTACAATGGTTAGCACAGTTCCACCCCTGATCTCGAAGTGCACATaattctaaagtaaattctaaagtaaaAAGGCTCTCTAAAACTCACCTTAAACATAGATAACATGTTTCTGTGGAAACATACTTAGCAATTTATAGATCTTAGTATAAAGAAAAATGATGTTATTAACATATTT----ATATTCAGATAATTATTTTTATTCTTCCCTTAAGCATTTTGCATAGTTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGCATCTTGTATCAAAATAAATAGTTTGAAATTTAAATTTGAAGAAATGGTGGGTCAGATTATTTGGATAATTACTTCCTACAATTCAATTTACTGGTGTATGCTCCATCTATTTCCTAACATACTTTGAAATGTTTCCAACTCAGTGCTATGGTTTCCATGAGGAGGGATTTTTATTTTGAGACAGCGAAACTACTGTATAATGTTACCAGGTCTTATAA------TTGACTTTAATACATTTCTAAAAATTTGTATTTTATTCAAAGACAAAT----------------------------------------------------ATTTTGTCTATCCTATCCACAGCTGG-------------------------T------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATAAATTGGCTGATTTGGATGTTTATT-AAATGACTAGTCTGTTGGACAGC--AGAGAGGAATGTTTCCAACTCACTGCTGTGGTTTCCTTGAGGAGGGGTTTTTACTTGTTCTCCTCTTACCTCTTTCCACAAGGGCAAAGTTACCTGCTGATAAATCGAGAGGCGAACTGCCAAATAGTCTAGACTCCAGTCCTGATGTTTCTTGGGAATCAGCCTGACCTGAGAGTGAGATTAAGCGTTCTAATCCATGCCTCCAGGTTAAGAGAACTGTAAGGACAGATTTCCATGTGCGGTTTCCAGCACCACTTGGGGCTGGGTGGCAAACTTCACCGAAACCCAGTCTTAAGTATTAGGGAGTT i colAng1.NW_012115433v1 C 0 M 1730 s calJac3.chr13 105245936 1229 + 117903854 TATGaacacttattataatagcctacaatctgccagctgctattctatgggttttacacattaaacttaac-ttctacaacaaacctatggaaggttctgttattataatctttccacatcttgaagagaatgaggcacagaaatattaagtaactggcctaaagtcatgcaatattagtacattgtagtaaggggatttgaacttaggaagtttggctccaACCAAGTGGAAATAATTTCCTGCTTA-TCTT-TTTACCTCAATAAACTTTTGCAGCACTCCCAAGGAATGCATGGTGATATATTTTATAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATAATTCTAAAGTAAGTTCTAAAGTAAAAAGCCTC-CTAAAACTCAAATTAACCATAGATAATATGTTCCCATGGAAACATACTTTGCAATTTATAGATCTTAATATAAAGAAAAATGGTATTTTTAACATATTT----ATAGTCAGATAATTATTTTTATTGTTCCCTTAAGCA-TTTGCATAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGGTAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATGTGAAGAAACGGTGGATCACATTATTTGGAGAATTACTTCCTACAATTCAATTTACTGGTATATGTTGCATCCATTTCCTAGCATAATTTGAGATGTTTCCAACTCAGTGCCATGGTTTCCATGAGGAGAAATTTTTACTTTGAGATAACTAAACTACTATATAATGTTACCAGGTTTTACAA------CTGACTTTAATAAATTTCTGAAAATTTGTATTTTATTCAAAGATAAATGGTTTGTCTGTCTTAATCCACAGCTGG----------------------------------------------------------------------------T------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATGAATTGGCTGATTTGGATGTTTATTAAAATAACTAGTCTGCTGGACAGC--AGAGAGCAATGTTTAAAACTCGATGCTGTGGTTTCCATGAGGAGTGGTTTTTACTGGCTCTCCTCTTACTTCTTTCCCCA-GGGCAAAGTTACCTGCTGATAAATCCAGAGGGGAACTGCCAAATAGTGTAGACTCCAGTCCTGATGTTTCTTGGGAATCGGCCTGAGATGACAGTAAGATTAAGGGTTCTAATCCACTCCTGCAGGTTAAGAGTACTGTAAGGGCAGATTTTCAATTACAATTTCAAGcagcacttggggctgggtggaaaactttgcctaaatctggtcttaagtattagggagtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19439206 1231 - 31320352 TATGaacacttattataatagcctacaatttgccagctgctattctatgggttttacacattaaacttaac-ttttacaacaaacctatggaaggttctgttattataatccttctacatcttgaagagaatgaggcacagaaatattaagaaactggcctaaagtcatgcaatatgagtacattgtagtaaggggatttgaacttaggaagtctggctccaACCAAGTGGAAATAATTTCCTGCTTATTTTT-TTTACCTCAACGAAGTTTTACAGTGCTCCCAAGGAATGCATGGTGATATATTTTATAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATAATTCTAAAGAAAGTTCTAAAGTAAAAAGCCTCTCTAAAACTCAGGTTAACCATAGATAATATGTTCCCATGGAAACATACTTTGCAATTTATAGATCTTAGTATAAAGAAAAATGATA-TTTTAACATATTT----ATAGTCAGATAATTATTTTTATTATTCCCTTAAGAA-TTTGCATAGTTTAAAAGAAGATTTTATTTATTCCAAAATATGTAAGGCAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATGTGAAGAAACGGTGGATCAGGTTATTTGGAGAATTACTTCCTACAATTCAATTTACTGGTGTATGTTGCATCTATTTCCTAACATAATATGAGATGTTTCCAACTCAGTGCTATGGTTTCCATGAAGAGAAATTTTTACTTTGAGATAGCTAAACTAGTATATAATGTTACCAGTTTTTACAA------CTGACTTTAATAAATTTCTAAAAATGTGTATTTTATTCAAAGATCAATGTTTTGTCTGTCTTAATCCACAGCTGG----------------------------------------------------------------------------T------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATGAATTGGCTGATTTGGATGTTTACTGAAATGACTAGTCTGCTGGACAGC--AGAGAGGAATGTTTAAAACTCACTGCTGTGGTTTCCATGAGGAGTGGTTTTTACTGGCTCTCCTCTTACTTCTTTCCACAGGGGCAAAGTTACCTGCTGATAAATCTAGAGGGGAACTGCCAAATAGTGTAGACTCCAGTCCTGATGTTTCttgggaatcagcctgacatgagagtaagattaagtgttctaatctattcctgcaggttaagagtactgtaagggcagatttccatgtgcgatttccagcaccacttggggctgggtcagagaatttgtttaaatctggtcttaagtattagggagtt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1634662 1224 + 2203405 tatgaacacttattataatagcctacaatttgccagctgctattctatgggttttacacattaaacttaactttttacaacaaacctatggaaggttctgttgttataatccttctacatcttgaagagaatgaggcacagaaatattaagtaactggcctaaagtcatgcaatattagtacattgtagtaaggggatttgaacttaggaagtctggctccaACCAAGTGGAAATAATTTCCTGCTTATCTTT-TTTACCTCAACAAACTTTTGCAGTGCTCCCAAGGAATGCATGGTGATATATTTTTTAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATAATTCTAAAGAAAGTTCT--AGTAAAAAGCCTCTCTAAAACTCACGTTAACCATAGATAATATGTTCCCATGGAAACATACTTTGCAATTTATAGATCTTAGTATAAAGAAAAATGATATTTTTAACATATTT----ATAGTCAGATAA------TTATTGTTCTCTTAAGCA-TTTGCATAATTTAAAACAAGATTTTATTTATTCTAAAATATGTAAGGCAGCTTGTATCAAAATAAATAGTTTGAAATTTAAATGTGAAGAAACGGTGGATCCGATTATTTGGAGAATTACTTCCTACAATTCAATTTACTGATATATGTTGCATCTATTTCCTAACATAATTTGAGATGTTTCCAACTCAGTGCTATGGTTTCCATGAGGAGAAATTTTTACTTTGAGACAGTTAAACTAC-ATATAATGTTACCAGGTTTTACAA------CTGACTTTAATAAATTTCTAAAAATTTGTATTTTATTTAAAGGTAAAT--------------------------GTTTTGTCTGTCTTAATCCACAGCTGG--------------------------------------------------T------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATGAATTGGCTGATTTGGATGTTTATTGAAATGACTAGTCTGCTGGACAGC--AGAAAGGAATGTTTGAAACTCACTGCTGTGGTTTCCATGAGGAGTGGTTTTTACTGGctctcctcttacttctttccacaggggcaaagttacctgctgataaatctagaggggaactgccaaatagtgtagactccagtcctgatgtttcttgggaatcagcctgacatgagagtaagagtaagtgttctaatacactcctgcaggttaagagtactgtaagggcagatttccatgtgcgatttccagcaccacttggggctgggtgggaaactttgcctaagtctggtcttaagtattagggagtt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3586596 1216 - 14941987 TATGaacacttattataatagcctacaatctgccagctgctattctacgggttttacacattaaacttaac-ttttacaacaaacctatgaagg--tctgttattataatccttctacatcttgaagagaatgaggcacaaaaatattaagtaactggcctaaagtcatgcaatattagtacgttgtagtaaggggatttgaacttaggaagtttggctccaACCAAGTCGAAATAATTTCCTGCTTATCATT-TTTACCTCCACAAACTTTTGCAGCGCTCCCAAGGAATGCATGGTGATACATTTTATAATGGTTAGCCCAGTTCCATCCCTGATCTCGAAGAGCACATAATTCTAAAGTAAGTTCTAAAGTAAAAAGCCTCTCTAAAACTCACGTTAACCATAGATAATATGTTCCCATGGAAACATACTTTGCAATTTATAGATCTTAGTATAAAGAAAAGTGATA-----------TTT----ATAGTCAGATAATTATTTTTATTGTTCCCTTAAGCA-TTTGAATAATTTAAAACAAGATTTTATTTATTCCAAAATATGTAAGACAGCGTGTATCAAAATAAATAGTTTGAATTTTAAATGTGAAGAAACGGCGGATCAGATTATTTGGAGAATTACTTCCTACAAGTCAATTTACTAGTAAATGTTGCATCTATTTCCTAACATAACTTGAGATGTTTCCAACTCAGTGCTATGGTTTCCATGAGGAGAAATTTTTACTTTGAGATAGCTAAACTACTATATAATGTTACCAGGTTTTACAA------CTGACTTTAATAAATTTCTAAAAATTTGTATTTTATTCAAAGATAAATGTTTTGTCTGTCTTAATCCACAGCTGGT---------------------------------------------------------------------------T------------------------------------------------------------------------T--------------------------TTGGTATTTTTAATGAATTGGCTGATTTGGATGTTTACTGAAATGACTAGTCTGCTGGACAGC--AGAGAGGAATGTTTAAAACTCACTGCTGTGGTTTCCATGAGGAGTGGTTTTTACTGGctctcct----cttctttccacaggggcaaagttacctgctgataaatctagaggggaactgccaaatcgtgtagactccagtcctgatgtttcttgggaatcagcctgacatgagaataagattaagtgttctaatccactcctgcaggttaagagtactgtaagggcagatttccatgtgcaatttccagcaccacttggggctgggtgggaaactttgcctaaataaggtcttaagtattagagagtt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112296590 153 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=596946.000000 s hg38.chr18_GL383571v1_alt 121466 69 + 198278 catctttgtcacattcttccaaactgggctttctcactaatagagcttacatttcaatctct--gatcctt s panTro5.chr18 65031491 71 + 78221452 catctttgtcacattcttccaaactgggctttctcactaatagagcttacatttcaatctctctgatcctt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64150591 69 + 77229886 catctttgtcacattcttccaaactgggctttctcactaatagagcttacatttcaatctcT--GATCCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370098 69 + 17472758 catctttgtcacattcttccaaactgggctttctcactaatagagcttacatttcaatctct--gatcctt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139410578 69 - 152096393 catctttgtcacattcttccagcctgggctttctcactaatagagcttacatttcaatctcT--GATCCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57359826 69 + 70235451 catctttgtcacattcttccagcctgggctttctcacgaatagagcttacagttcaatctcT--GATCCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051224 69 - 75711847 catctttgtcacattcttccagcctgggctttctcacgaatagagcttacagttcaatctct--gatcctt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13603974 69 - 18804593 catctttgtcacattcttccagcctgggctttctcactaatagagcttacagttcaatctcT--GATCCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13220881 69 + 18905526 catctttgtcacattcttccagcctgggctttctcactaacagagcttacatttcaatctcT--GATCCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60050511 69 - 72318688 catctttgtcacattcttccagcctgggctttctcactaatagagcttacatttcaatctct--gatcctt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384134 69 - 1517660 catctttgtcacattcttccagcctgggctttctcactaatagagcttacatttcaatctcT--GATCCTT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105247165 68 + 117903854 catctttgtcacattctt-caacctagtctttctcactaatagagctcacatttcaatctct--gatcctt i calJac3.chr13 C 0 I 479 s saiBol1.JH378121 19440437 68 - 31320352 catctttgtcacattctt-caacctagtctttctcactaatagagctcacatttcaatctct--gatcttt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1635886 68 + 2203405 cgtctttgtcacattctt-caacctagactttctcactaatagagctcacatttcaatctct--gatcttt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3587812 68 - 14941987 catctttgtcacattctt-caaccttgtctttctcactaatagagctcacatttcaatctct--gatcctt i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112296590 153 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=877921.000000 s hg38.chr18_GL383571v1_alt 121535 105 + 198278 tgttccctcgacaggatcataatg----taagcagggaaggagaagtgcaatcctgccctcctcaaaACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC s panTro5.chr18 65031562 105 + 78221452 tgttccctcgacaggatcataatg----taagcagggaaggagaagtgcaatcctgccctcctcaaaACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64150660 106 + 77229886 TGTTCCCTCGACAGGATCATAATG----TAAGCAGGGAAGGAGAAGTGCAATCCTGCCCTCCTCAAAACTGTGAACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370167 105 + 17472758 tgttccctcgacaggatcataatg----taagcagggaaggagaagtgcaatcctgccctcctcaaaACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139410647 105 - 152096393 TGTTCCCTCGACAGGATCATAATG----TAAGCAGGGAAGTAGAAGTGCAATCCTGCCCTCCTCAAAACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57359895 105 + 70235451 TGTTACCTCGACAGGATCATAATG----TAAGTAGGGAAGTAGAAGTGCACTCCTGCCCTCCTCAAAACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051293 105 - 75711847 tgttacctcgacaggatcataatg----taagtagggaagtagaagtgcaatcctgccctcctcaaaACTGTG-ACACAATCTAAACCCTCCCACAGAGATGGGGCAATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604043 105 - 18804593 TGTTACCTCGACAGGATCATAATG----TAAGTAGGGAAGTAGAAGTGCAATCCTGCCCTCCTCAAAACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13220950 105 + 18905526 TGTTACCTCGACAGGATCACAATG----TAAGTAGGGAAGTAGAAGTGCAATCCCGCCCTCCTCAAAACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAGTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60050580 105 - 72318688 tgttacctcgacaggatcataatg----taagtagggaagtagaagtgcaatcctgccctcctcaaaACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384203 105 - 1517660 TGTTACCTCGACAGGATCACAATG----TAAGTAGGGAAGTAGAAGTGCAATCCCGCCCTCCTCAAAACTGTG-ACACAATCTAAACTCTCCCACAGAGATGGGGCAATC i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105247712 108 + 117903854 TGTTCCCTCGACAGGATCAGAACGAACATAAGCAGGGAAGTAGAAGTGCAATACTG-CCTCCTCAAAACTGTA-ACAAAATCTAAACTATCCCGCAGAGAGGGGGCGATC i calJac3.chr13 I 479 C 0 s saiBol1.JH378121 19440505 107 - 31320352 tgttccctcgacaggatcagaaagaacataagcagggaagtagaagtgcgatactg-cctcctcaaaACTGTA-ACACAATCTAAACTCTCCCGCGGA-AAGGGGCGATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1635954 108 + 2203405 tgttccctcgacaggatcagaaagaacataagcagggaagtagaagtgcaatactg-cctcctcaaaACTGTA-ATATAATCTAAACTCTCCCGCTGAGAGGGGGCGATC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3587880 108 - 14941987 tgttccctcgacaggatcagaatgaacataagcagggaagtagaagtgcaatactg-cctcctcaaaACTGCA-GCACAGTCTAAACTCTCCTGCAGAGAGGGGACAATC i aotNan1.NW_018502140v1 C 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112296590 153 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=217981.000000 s hg38.chr18_GL383571v1_alt 121640 34 + 198278 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa s panTro5.chr18 65031667 34 + 78221452 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64150766 34 + 77229886 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370272 34 + 17472758 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139410752 34 - 152096393 AATGTGAGGACTCAGCAAAAGAACGC---------------------------------------------------------AGAaagaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360000 34 + 70235451 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051398 34 - 75711847 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604148 34 - 18804593 AATGTGAGGACTTAGCAAAAGAATGC---------------------------------------------------------AGAaagaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221055 34 + 18905526 AATGTGAGGACTTAGCAAAAGAATAC---------------------------------------------------------AGAaagaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60050685 30 - 72318688 AATGTGAGGACTTAGCAAAACAATGC-------------------------------------------------------------agaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384308 34 - 1517660 AATGTGAGGACTTAGCAAAAGAATAC---------------------------------------------------------AGAaagaa i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105247820 90 + 117903854 ATTGTGAGGATTTagcaaaagaatgcaggcagcctctcagagctgaaaaaggcaaggaaacaga-ttctttcctagagactccagaaagaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19440612 90 - 31320352 ATTGTGAGGATTTagcaaaagaatgcaggcagcctctaagagctgaaaaaggcaaggaaacaga-ttctttcctagagactccagaaagaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636062 91 + 2203405 ATTGTGAGGATTTagcaaaagaatgcaggcagcctctaagagctgaaaaaggcaaggaaacagatttctttcctagagactccagaaagaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3587988 90 - 14941987 ATTGTGAGGATTTagcaaaagaatgcaggcagcctctaagagctgaaaaaggcaaggaaacaga-ttctttcctagagactccagaaagaa i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111830602 28 + 195471971 aatgtgaatcct-----agagattac---------------------------------------------------------ataaag-g i mm10.chr1 N 0 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112296590 153 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=2152846.000000 s hg38.chr18_GL383571v1_alt 121674 244 + 198278 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttataagctactaagtttatggtaactt----------------gATAACCTTATACATACATGGATGATCACAATTTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTCATGC-AGGTG-AACATTGGCCTGAATTTAA-GTTATTCATGAGTAGAAACTTCCTATCATTTT s panTro5.chr18 65031701 244 + 78221452 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttataagctactaattttatggtaactt----------------gATAACCTTATACATACATGGATGATCACAATTTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTCATGC-AGGTG-AACATTGGCCTGAATTAAA-GTTATTCATGAGTAGAAACTTCCTATCATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64150800 244 + 77229886 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttataagctactaagtttatggtaactt----------------gATAACCTTATACATACATGGATGATCACAATTTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTCATGC-AGGTG-AACATTGGCCTGAATTAAA-GTTATTCATGAGTAGAAACTTCCTATCATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370306 244 + 17472758 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttataagctactaagtttatggtaactt----------------gATAACCTTATACATACATGGATGATCACAATTTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTCATGC-AGGTG-AACATTGGCCTGAATTAAA-GTTATTCATGAGTAGAAACTTCCTATCATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139410786 243 - 152096393 acacagacctaacaatacctttattttagcctaatgataccca-ttcagacttttgatttccaaaaa---------tgtaaa--ataataa-----atttctgttgttataagctactaagtttatggtaactt----------------gATAACCTTATACATACATGGATGATCACAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTCTGATGC-AGGTG-AACATTGGCCTGAATTAAA-GTTATTCATGAGTAGAAATTTTCTGTCATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360034 241 + 70235451 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttgtgatttccataaa---------tgtaaa--ataataa-----atttctgttgttatcagctact--gtttatggtaactt----------------gATAACCTTTTACATACATGGATGATCAGAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGGTG-AACACTGGCCTGAATTGAA-GTTATTCATGAGTAGAAATTTTCTATCATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051432 241 - 75711847 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttgtgatttccataaa---------tgtaaa--ataataa-----atttctgttgttatcagctact--gtttatggtaactt----------------gATAACCTTTTACATACATGGATGATCAGAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGGTG-AACACTGGCCTGAATTGAA-GTTATTCATGAGTAGAAATTTTCTATCATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604182 241 - 18804593 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttgtgatttccataaa---------tgtaaa--ataataa-----atttctgttgttatcagctact--gtttatggtaactt----------------gATAACCTTTTACATACATGGATGATCAGAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGGTG-AACACTGGCCTGAATTGAA-GTTATTCATGAGTAGAAATTTTCTATCATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221089 241 + 18905526 acacagacctaacaacacctttattttagcctgatgataccca-ttcagacttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttatcagctact--gttgatggtaactt----------------gATAATCTTTTACATACATGGATGATCAGAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGGTG-AACACTGGCCTGAATTGAA-GTTATTCATGAGTAGAAATTTTCTATCATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60050715 240 - 72318688 acacagatctaacaacacctttattttagcctaatgataccca-ttcagacttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttatcagctact--gtttatggtaactt----------------gATAA-CTTTTACATACATGGATGATCAGAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGGTG-AACACTGGCCTGAATTGAA-GTTATTCATGAGTAGAAATTTTCTATCATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384342 241 - 1517660 acacagacctaacaacacctttattttagcctaatgataccca-ttcagacttttgatttccataaa---------tgtaaa--atagtaa-----atttctgttgttatcagctact--gtttatggtaactt----------------gATAATCTTTTACATACATGGATGATCAGAA-TTTTACAAAAGCATAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGGTG-AACACTGGCCTGAATTGAA-GTTATTCATGAGTAGAAATTTTCTATCATTTT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105247910 256 + 117903854 acacagacctaacaacacctttattatagcctaatgagagccatttcaggcttttgatttccataaa---------tgtaaa--ataatga-----atttctgttgttttaagctactaagtttatggtaactt-gttacagc----agagataACTTTATACATACATGGATGGACAAAA-CTTTACAAAAGCACAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGATG-AACATTGATCTGAATTAAAAATTATTCAGGAGTAGAAATTTTCTATCACTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19440702 256 - 31320352 acacagacctaacaacacctttattgtagcataatgagacccgtttcaggcttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttttaagctactaagtttatggtaactt-gttacagc----agagataACTTTATACATACATGGATGGTCAAAA-TTTTACAAAAGCACAGA--AGGTAG-----AGCTCTGCTTTGATGC-AGACA-AACATTGGTCTGAATTAAACATTATTCATGAGTAGAAATTTTCTATCATTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636153 260 + 2203405 acacagacctaacaacacctttattgtagcctaatgagacccatttcaggcttttgatttccataaa---------tgtcaa--ataataa-----atttctgttgttttaagctactaagtttatagtaactt-gttacagcataaaaagataactTTATACATACATGGATGGTCAAAA-TTTTACAAAAGCACAGA--AGGGAG-----AGCTCTGCTTTGATTC-AGACA-AACATTGGTCTAAATTAAAAATTATTCATGAGTAGAAATTTTCTATCATTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588078 253 - 14941987 acacagacctaacaacacctttattgtagcc---tgagacccatttcaagcttttgatttccataaa---------tgtaaa--ataataa-----atttctgttgttttaagctactaagtttatggtaacttcgttacagc----agagataACTTTATACATACAAGGATGGTCAAAA-TTTTACAAAAGCACAGA--AGGGAG-----AGCTCTGCTTTGATGC-AGACG-AACATTGGTCTGAATTTAAAATTATTCATGGGTTG-AATTTTCTATCATTTT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111830630 258 + 195471971 atttgggcctacagacatctttatt---gcct--------cag-ctccaactcctgataaacatgtaaagatcatccataag--atactaagctttatgtttgtttgttaaagtaactaaggtgagggtgattt-attacagcagccat-gctaa-gttacaaatacaTCTGTGGCAAAAA-CTCAGAAAAAGCATGAC-----GAG-----TGCATTGCTTTGATGT-TGAAGAAATACTGCCCACCATTCAATGGCATTCAAGAAAACAAAATTTCTCTCATTTT i mm10.chr1 C 0 C 0 s canFam3.chr1 112296743 256 - 122678785 acaaagagctac---cacctttattttagcccagtgagactcatttcatacttctaa-----ataat---------tgaaaaagacagtaa-----gtcggtgtt-----aagacaccaaatttatggtcacac-gttacgggagtgat-aataaccttctacaTACATGTATGATCAAAA-TTCTATGAAAGCACAGAAAAGGAAGTACCTAGTTCTGCTTAGATGCTTAATA-AATATTGGCCAGAATCAACAGCCATTCATAAGCAGAAATTTTCTATTATTTA i canFam3.chr1 I 153 C 0 e proCoq1.NW_012148742v1 1258084 807 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=850137.000000 s hg38.chr18_GL383571v1_alt 121918 75 + 198278 TAGGTATGATTTTATTGAGAGTTCTACAAATATAAGCCTCATTGTACATCATATATTGAAGGATTTAGATTCAAG s panTro5.chr18 65031945 75 + 78221452 TAGGTATGATTTTATTGAGAGTTCCACAAATATAAGCCTCATTGTACATTATATATTGAAGGATTTAGATTCAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151044 75 + 77229886 TAGGTATGATTTTATTGAGAGTTCCACAAATATAAGCCTCATTGTACATCATATATTGAAGGATTTAGATTCAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370550 75 + 17472758 TAGGTATGATTTTATTGAGAGTTCCACAAATATAAGCCTCATTGTACATCATATATTGAAGGATTTAGATTCAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411029 75 - 152096393 TAGGTATGATTTTATTGAGCATTCCACAAATATAAGCCTCATTGTACATCATATATTGAAGGATTTAGATTCAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360275 75 + 70235451 TAGGTATGATTTTATTGAGAGTTCTACAAATATAAGCCTCATTGCACATCATATGTTGAAGGATTTAGATTCAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051673 75 - 75711847 TAGGTATGATTTTATTGAGAGTTCTACAAATATAAGCCTCATTGCACATCATATGTTGAAGGATTTAGATTCAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604423 75 - 18804593 TAGGTATGATTTTATCAAGAGTTCTACAAATATAAGCCTCATTGCACATCATATGTTGAAGGATTTAGATTCAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221330 75 + 18905526 TAGGTATGATTTTATCGAGAGTTCTACAAATACAAGCCTCATTGCACATCATATGTTGAAGGATTTAGATTCAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60050955 75 - 72318688 TAGGTATGATTTTATCGAGAGTTCTACAAATATAAGCCTCACTGCACATCATATGTTGAAGGATTTAGATTCAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384583 75 - 1517660 TAGGTATGATTTTATCGAGAGTTCTACAAATACAAGCCTCATTGCACATCATATGTTGAAGGATTTAGATTCAAG i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248166 75 + 117903854 TAGGTATGATTTTATTGAGAGTTCCACAAATACAAGCCTCAGTGTACATCATATATTAAAGGATTTAGATTCAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19440958 75 - 31320352 TAGGTATGATTTTATCGAGAGTTCCACAAATACAAGCCTCATCGTACATCAGATATTAAAGGATTTAGATTCAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636413 75 + 2203405 TAGGTATGATTTTATTGAGAGTTCCACAAATACAAGCCTCATTGTACATCAGATATTAAAGGATTTATATTCAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588331 75 - 14941987 TAGGTATGATTTTATTAGAAGTTCCACAAATACAAGCCTCATTGTACATCATGTATTAAAGGATTTAGATTCAAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1258891 75 - 1406956 TAGGTATGATTTTATTAGGAGTTCCACAAATATAAGCCTTGTTGTACATTATATATTAAAGGATTTAAATTCAAG i proCoq1.NW_012148742v1 I 807 I 63 s mm10.chr1 111830888 72 + 195471971 TATGTATG---CTGTTAAGAATTCCACAATTATAACCTTTACTTTGCACCATATATTAGAAGATTTAAATTGGTT i mm10.chr1 C 0 C 0 s canFam3.chr1 112296999 74 - 122678785 -AGGCATGATTTTTTAATGATTTATGCAATTATAATCTTCCTATCTTATCACATATTAAAAGATTTAAATTCAAG i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=165949.000000 s hg38.chr18_GL383571v1_alt 121993 17 + 198278 TGGCAATAATGTCTGTA s panTro5.chr18 65032020 17 + 78221452 TGGCAATAATGTCTGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151119 17 + 77229886 TGGCAATAATGTCTGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370625 17 + 17472758 TGGCAATAATGTCTGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411104 17 - 152096393 TGAAAATAATGTATGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360350 17 + 70235451 TGGCAATAATGTATGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051748 17 - 75711847 TGGCAATAATGTATGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604498 17 - 18804593 TGGCAATAATGTATGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221405 17 + 18905526 TGGCAATAATGTATGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051030 17 - 72318688 TGGCAATAATGTATGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384658 17 - 1517660 TGGCAATAATGTATGTA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248241 17 + 117903854 TAGCAATAATGAATGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441033 17 - 31320352 TAGCAATAATGTATGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636488 17 + 2203405 TAGCAATAATGTATGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588406 17 - 14941987 TAGCAATAATGTATGTA i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111830960 17 + 195471971 TGTCAAAACTTTATATA i mm10.chr1 C 0 C 0 s canFam3.chr1 112297073 17 - 122678785 TGGCAACAATTTATACA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=14292.000000 s hg38.chr18_GL383571v1_alt 122010 2 + 198278 TA s panTro5.chr18 65032037 2 + 78221452 TA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151136 2 + 77229886 TA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370642 2 + 17472758 TA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411121 2 - 152096393 TA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360367 2 + 70235451 TA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051765 2 - 75711847 TA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604515 2 - 18804593 TA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221422 2 + 18905526 TA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051047 2 - 72318688 TA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384675 2 - 1517660 TA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248258 2 + 117903854 TG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441050 2 - 31320352 TG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636505 2 + 2203405 tt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588423 2 - 14941987 TG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111830977 2 + 195471971 TA i mm10.chr1 C 0 I 6 e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112297090 0 - 122678785 C e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=158756.000000 s hg38.chr18_GL383571v1_alt 122012 20 + 198278 -TATTTATGTAtttttgaaac s panTro5.chr18 65032039 20 + 78221452 -TATTTATGTAttttggaaac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151138 20 + 77229886 -TATTTATGTAtttttgaaac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370644 20 + 17472758 -TATTTATGTAtttttgaaac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411123 20 - 152096393 -TATTTATGTAtttttgaaac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360369 20 + 70235451 -TTTTTATGTAtttttgaaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051767 20 - 75711847 -TTTTTATGTAtttttgaaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13604517 20 - 18804593 -TTTTTATGTAtttttgaaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221424 20 + 18905526 -TTTTTGTGTAtttttgaaac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051049 20 - 72318688 -TTTTTATGTAtttttgaaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384677 20 - 1517660 -TTTTTGTGTAtttttgaaac i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248260 20 + 117903854 -TAtttatttatttttaaaac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441052 21 - 31320352 TTATTTATTTATTTTTGAAAC i saiBol1.JH378121 C 0 M 189 s cebCap1.NW_016107689v1 1636507 20 + 2203405 -tatttatttatttttgatac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588425 20 - 14941987 -TATGTAtttatttttgaaac i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111830979 6 + 195471971 I e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112297090 0 - 122678785 C e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=1069886.000000 s hg38.chr18_GL383571v1_alt 122032 164 + 198278 agtgtctcactatgttacccaggttggaatg-cagtgacaggatcacagctcactgcagccttgacctcctgggatcaaacaatcttcccatctcaacctcctgagtatttgagaccacaggcatgcaccaccgcatttggctcag------------------------------------------------------tttctttctttcttctttt-- s panTro5.chr18 65032059 159 + 78221452 agtgtctcactatgttacccaggttggaatg-cagtgacaggatcacagctcactgcagccttgacctcctgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcagcaccgcatttggctcag------------------------------------------------------tttctttctttctt------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151158 162 + 77229886 agtgtctcactatgttacccaggttggaatg-cagtgacaggatcacagctcactgcagccttgacctcctgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcaccaccgcatttggctcgg------------------------------------------------------tttctttctttttt--ttt-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370664 162 + 17472758 agtgtctcactatgttacccaggttggaatgccagtgacaggatcacagctcactgcagccttgacctcctgggatcaaacaatcttcccacctcaacctcctgagtatttg-gaccacaggcatgcaccactgcatttggctcgg------------------------------------------------------tttcttctttcttt--ctt-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411143 159 - 152096393 agtgtctcactatgttacccaggttggagtg-cagtggcaggatcacagttcactgcagccttgacctcctgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcaccaccacatttggctcgg------------------------------------------------------tttctttttctttt------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360389 162 + 70235451 agtgtctcactatgttacccaggttggagtg-ccgtgacaggatcacagctcactgcagcctcgacctagtgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcaccaccacatttggctcag------------------------------------------------------tttctttctctttc--tct-- i rheMac8.chr18 C 0 I 6 s macFas5.chr18 63051787 162 - 75711847 agtgtctcactatgttacccaggttggagtg-ccgtgacaggatcacagctcactgcagcctcgacctagtgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcaccaccacatttggctcag------------------------------------------------------tttctttctctttc--tct-- i macFas5.chr18 C 0 I 6 s macNem1.NW_012016688v1 13604537 162 - 18804593 agtgtctcactatgttacccaggttggagtg-ccgtgacaggatcacagctcactgcagcctcgacctcgtgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcaccaccacatttggctcag------------------------------------------------------tttctttctctttc--tct-- i macNem1.NW_012016688v1 C 0 I 6489 s cerAty1.NW_012001075v1 13221444 160 + 18905526 agtatctcactatgttacccaggttggagtg-ccgtgacaggatcacagctcactgcagcctcgacctcgtgggatcaaacaatcttcccacctcagtctcctgagtatttgggaccacagacatgcaccaccacatttggctcag------------------------------------------------------tttctttctctttc--t---- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051069 162 - 72318688 agtgtctcactatgttacccaggttggagtg-ccgtgacaggatcacagctcactgcagcctcgacctcgtgggatcaaacaatcttcccacctcaacctcctgagtatttgggaccacaggcatgcaccaccacatttggctcag------------------------------------------------------tttctttctctttc--tct-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384697 162 - 1517660 aatatctcactatgttacccaggttggagtg-ccgtgacaggatcacagctcactgcagcctcgacctcgtgggatcaaacaatcttcccacctcaatctcctgagtatttgggaccacagacatgcaccaccacatttggctcag------------------------------------------------------tttctttctctttc--tct-- i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248280 202 + 117903854 agagtctcactatgttacctaggctggagtg-cagtgacaggatcatggctcactgcagcctcaacc----------------tctttccacctcaacctcctgagtagcttggaccacaggcatgcaccactacatctggctagttttttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctt--tcttt i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1636527 148 + 2203405 agagtctcactatgttacctaggctggagtg-cagtgacagaatcatggctcactgcagcctcaacc----------------tcttcccacctcaacctcccaagtagcttggaccacaggcatgcaccactacatctggctagt------------------------------------------------------tttctttctttctt--tcttt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588445 148 - 14941987 agagtctcactatgttacctaggctggagtg-cagtgacaggatcatggctcactgcagcctcaacc----------------tcttcccacctcaacctcctgagtagcttggaccacaggcatgcaccactatatctggctagt------------------------------------------------------tttctttctttctt--gtttt i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111830979 6 + 195471971 I e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112297090 0 - 122678785 C e otoGar3.GL873546 11227901 122 - 20685099 I e saiBol1.JH378121 19441073 189 - 31320352 M e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=30390.000000 s hg38.chr18_GL383571v1_alt 122196 15 + 198278 ttttttttttttttt--------------- s panTro5.chr18 65032218 15 + 78221452 tctttcttttttttt--------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151320 15 + 77229886 ttttttttttctttt--------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370826 15 + 17472758 ttttttttttttttt--------------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411302 4 - 152096393 -----------tttt--------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360557 15 + 70235451 ttttttttttttttt--------------- i rheMac8.chr18 I 6 C 0 s macFas5.chr18 63051955 15 - 75711847 ttttttttttttttt--------------- i macFas5.chr18 I 6 C 0 s macNem1.NW_012016688v1 13611188 15 - 18804593 ttttttttttttttt--------------- i macNem1.NW_012016688v1 I 6489 C 0 s cerAty1.NW_012001075v1 13221604 15 + 18905526 ctttttctttttttt--------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051231 15 - 72318688 ttttctttttttttt--------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384859 13 - 1517660 ttttc--tttttttt--------------- i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248482 15 + 117903854 --------cttttctt-------tctttct i calJac3.chr13 C 0 I 52 s cebCap1.NW_016107689v1 1636675 7 + 2203405 --------ctttttt--------------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588593 22 - 14941987 --------ttttttgtgtgtgtgtgtgtgt i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111830979 6 + 195471971 I e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112297090 0 - 122678785 C e otoGar3.GL873546 11227901 122 - 20685099 I e saiBol1.JH378121 19441073 189 - 31320352 M e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=1040883.000000 s hg38.chr18_GL383571v1_alt 122211 127 + 198278 gtagagatagggtcttgctatcttgcccaggctggtctcaaactcctggcctcaattaatcctcctgtcttggccccacaaagtgctgggattacaggtgtgagccatcgcatccaacc----ATTTATAT- s panTro5.chr18 65032233 127 + 78221452 gtagagatagggtcttgctatcttgcccaggctggtctcaaactcctggcctcaattaatcctcctgtcttggccccacaaagtgctgggattacaggtgtgaaccatcgcatccaacc----ATTTATAT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151335 127 + 77229886 gtagagatagggtcttgctatcttgcccaggctggtctcaaactcctggcctcaattaatcctcctgtcttggccccacaaagtgctgggattacaggtgtgagccatcacatccaacc----ATTTATAT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370841 127 + 17472758 gtagagatagggtcttgctttcttgcccaggctggtctcaaactcctggcctcaattaatcctcctgtcttggccccacaaagtgctgggattacaggtgtgagccatcgcatccaacc----ATTTATAT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411306 132 - 152096393 ttagagttagggtcttgctatcttgcctaggctggtctcaaactcctggcctcaagtaatcctcctgtcttggccccataaagtgctgggattacaagtgtgagccatcacatccaaccAACAATTTATATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360572 132 + 70235451 gtaaagatagggtctcgctatctttcccaggctagtctcgaactcctggcctcaagtaatcctcctgtcttggcccctcaaagtgctgggattacaggtgtgagccatcgcatccaaccAACAATTTATATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63051970 132 - 75711847 gtaaagatagggtctcgctatctttcccaggctagtctcgaactcctggcctcaagtaatcctcctgtcttggcccctcaaagtgctgggattacaggtgtgagccatcgcatccaaccAACAATTTATATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611203 132 - 18804593 gtaaagatagggtctcgctatctttcccaggctagtctcgaactcctggcctcaagtaatcctcctgtcttggcccctcaaagtgctgggattacaggtgtgagccatcgcatccaaccAACAATTTATATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221619 132 + 18905526 gtaaagataggctctcgctatctttcccaggctagtctcaaactcctggcctcaagtaatcctcctgtcttggcccctcaaagtgctgggattacaggtgtgagtcatcgcatccaaccAACAATTTATATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051246 132 - 72318688 gtaaagatagggtctcgctatctttcccaggctagtctcgaactcctggcctcaagtaatcctcctgtcttggcccctcaaagtgctgggattacaagtgtgagccatcgcatccaaccAACAGTTTATATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 384872 132 - 1517660 gtaaagatagggtctcgctatctttcccaggctagtctcaaactcctggcctcaagtaatcctcctgtcttggcccctcaaagtgctgggattacaggtgtgagccatcgcatccaaccAACAATTTATATA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248549 127 + 117903854 tttgagatagggtttcactatattgcccaggccagtcttgaactcctggcctcaagtaatactcctgtcttggcccatccaagtgctgagattacaggtgtgagccatcacacccaaccA-CAATTTG---- i calJac3.chr13 I 52 C 0 s saiBol1.JH378121 19441264 128 - 31320352 gtagagatagggtttcactatattgcctaggccagtcttgaactcctggcctcaagtaatcctcttgtcttggcccatccaagtgctgggattacaggtgtgagccatcacacccaaccAGCAATCTG---- i saiBol1.JH378121 M 189 C 0 s cebCap1.NW_016107689v1 1636682 128 + 2203405 gtagagataggatttcactatattgcccaggccagtcttgaactcctggcctcaagtaatcctcctgtcttggcccatccgagtgctgggattacaggtgtgagccatcacacccaaccAGCAATTTG---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588615 128 - 14941987 gtagagatagagtttcactatattgcccaggccagtcttgaactcctggcctcaggtaatcctcctgtcttggcccatccaagtgctgggattacaggtgtgagccatcacacccaaccAGCAATTTG---- i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111830979 6 + 195471971 I e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e canFam3.chr1 112297090 0 - 122678785 C e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=123544.000000 s hg38.chr18_GL383571v1_alt 122338 13 + 198278 TGGATAATTTGTG s panTro5.chr18 65032360 13 + 78221452 TGGATAATTTGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151462 13 + 77229886 TGGATAATTTGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370968 13 + 17472758 TGGATAATTTGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411438 13 - 152096393 TGGATAATTTGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360704 13 + 70235451 TGGGTAATGTGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052102 13 - 75711847 TGGGTAATGTGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611335 13 - 18804593 TGGGTAATGTGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221751 13 + 18905526 TGGATAATTTGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051378 13 - 72318688 TGGATAATTTGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385004 13 - 1517660 TGGATAATTTGTG i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248676 13 + 117903854 TGGATAATTTGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441392 13 - 31320352 TGGATAATTTGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636810 13 + 2203405 TGGATAATTTGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588743 13 - 14941987 TGGATAATTTGTA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112297090 13 - 122678785 TGGCTAATTTGTA i canFam3.chr1 C 0 C 0 e mm10.chr1 111830979 6 + 195471971 I e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=313631.000000 s hg38.chr18_GL383571v1_alt 122351 29 + 198278 TAAATCATGTATCTTCTGGTCTTCAGTGG s panTro5.chr18 65032373 29 + 78221452 TAAATCATGTATCTTCTGGTCTTCAGTGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151475 29 + 77229886 TAAATCATGTATCTTCTGGTCTTCAGTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5370981 29 + 17472758 TAAATCATGTATCTTCTGGTCTTCAGTGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411451 29 - 152096393 TGAATCATGTATCTTCTGGTCTTCAGTGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360717 29 + 70235451 TAAATCATGTATCTTCTGGTCTTTAGTGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052115 29 - 75711847 TAAATCATGTATCTTCTGGTCTTTAGTGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611348 29 - 18804593 TAAATCATGTATCTTCTGGTCTTTAGTGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221764 29 + 18905526 TAAATCATGTATCTTCTGGTCTTCAGTGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051391 29 - 72318688 TAAATCATGTATCTTCTGGTCTTCAGTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385017 29 - 1517660 TAAATCATGTATCTTCTGGTCTTCAGTGG i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248689 29 + 117903854 TAAATCATGTATCTTCTGGTCTTCAGTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441405 29 - 31320352 TAAGTCATGTATCTTCTGGTCTTCAGTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636823 29 + 2203405 TAAATCATGTATCTTCTGGTCTTCAGTGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588756 29 - 14941987 TAAATCACGTATCTTCTGGTCTTCAGTGG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111830985 29 + 195471971 TAACTCATGAGTCCTTTAGTCATCTTTAT i mm10.chr1 I 6 C 0 s canFam3.chr1 112297103 29 - 122678785 TAATTCATGTAGCCTCTGGTTTTCAGCAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1258966 63 - 1406956 I e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=194075.000000 s hg38.chr18_GL383571v1_alt 122380 17 + 198278 CACATAATGTTAT-GATT s panTro5.chr18 65032402 17 + 78221452 CACATAATGTTAT-GATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151504 17 + 77229886 CACATAATGTTAT-GATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371010 17 + 17472758 CACATAATGTTAT-GATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411480 17 - 152096393 CACATAATGTTAT-GATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360746 17 + 70235451 CACATAATGTTAT-GATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052144 17 - 75711847 CACATAATGTTAT-GATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611377 17 - 18804593 CACATAATGTTAT-GATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221793 17 + 18905526 CACATAATGTTAT-GATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051420 17 - 72318688 CACATAATGTTAT-GATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385046 17 - 1517660 CACATAATGTTAT-GATT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248718 17 + 117903854 CACATAATGTTAT-GATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441434 17 - 31320352 CACATAATGTTAT-GATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636852 17 + 2203405 CACATAATGTTAT-GATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588785 17 - 14941987 CACATAATGTTAT-GATT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1259029 17 - 1406956 CACGTAATGTTAT-GAAT i proCoq1.NW_012148742v1 I 63 C 0 s mm10.chr1 111831014 16 + 195471971 --GACAATTTTTTAAATT i mm10.chr1 C 0 C 0 s canFam3.chr1 112297132 17 - 122678785 GAAATGATTTTAT-GAAT i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 470395 889 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=4454276.000000 s hg38.chr18_GL383571v1_alt 122397 368 + 198278 AAACTACAAGGACATAAAAGCAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGGTTTAACAAACTTTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ACGAACACTCTTT-----AATACCAGATGTGAAGTGATTTCTCCTAGCGTAAAGTCAAAATACATTAGTGACT-CAGCCCTGTGACAGCTTGTACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAAAATTAATGATATGTTTGTTTGAGAATCAACTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTTAATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA s panTro5.chr18 65032419 368 + 78221452 AAACTACAAGGACATAAAAGCAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGATTTAACAAACTTTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ACGAACACTCTTT-----AATACCAGATGTGAAGTGGTTTCTCCTAGCGTAAAGTCAAAATACATTAGTGACT-CAGCCCTGTGACAGCTTGTACCCTGGAGATTGTCTCTTCAAAGTGCAGAGACAGACTGAAAAAAATTAATGATATGTTTGTTTGAGAATCAACTTAAAGGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTTAATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151521 368 + 77229886 AAACTACAAGGACATAAAAGCAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGATTTAACAAACTTTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ACGAACACTCTTT-----AATACCAGATGTGAAGTGGTTTCTCCTAGCATAAAGTCAAAATACATTAGTGACT-CAGCCCTGTGACAGCTTGTACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAAAATTAATGATATGTTTGTTTGAGAATCAACTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTTAATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371027 367 + 17472758 AAACTACAAGGACATAAAAGCAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGATTTAACAAACTTTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ACGAACACTCTTT-----AATACCAGATGTGAAGTGGTTTCTCCTAG-GTAAAGTCAAAATACATTAGTGACT-CAGCCCTGTGACAGCTTGTACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAAAATTAATGATATGTTTGTTTGAGAATCAACTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTTAATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411497 368 - 152096393 AAACTACAAGGACATAAAAGCAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGATTCAACAAACTTTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ACGAACACTCTTT-----AATACCAGATGTGAAGTGGTTTCTCCTAGCGTAAAGTCAAAATACATTAGTGACT-CAGCCCTGTGACAGCTTGTACCCTGGAGATTATCTCTTCAAAGTGCAGAGATAGACTGAAAAAAATTAATGATATGTTTGTTTGAGAATCAACTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTGAATCTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57360763 368 + 70235451 AAACTGCAAGGACATAAAAGCAATTTGGGTACATCTTTTA-AAACATGCTTAAACAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ATGAACACTTTTT-----AATACCAGATGTAAAGTGGTTTCTCCTAGCGTAAAGTCAAATTGCATTAGTGACT-CAGTCCTGTGACAGCTTGCACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAACAGTAATGATATGTTTGTTTGAGAATCAGCTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTGCATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052161 368 - 75711847 AAACTACAAGGACATAAAAGCAATTTGGGTACATCTTTTA-AAACATGCTTAAACAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ATGAACACTTTTT-----AATACCAGATGTAAAGTGGTTTCTCCTAGCGTAAAGTCAAATTGCATTAGTGACT-CAGTCCTGTGACAGCTTGCACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAACAGTAATGATATGTTTGTTTGAGAATCAGCTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTGCATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611394 368 - 18804593 AAACTACAAGGACATAAAAGCAATTTGGGTACATCTTTTA-AAACATGCTTAAACAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ATGAACACTTTTT-----AATACCAGATGTAAAGTGGTTTCTCCTAGCGTAAAGTCAAATTGCATTAGTGACT-CAGTCCTGTGACAGCTTGCACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAACATTAATGATATGTTTGTTTGAGAATCAGCTTAAATGTCTGCATACAAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTGCATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13221810 368 + 18905526 AAACTACAAGGACATAAAAGCCATTTGGGCACATCTTTTA-AAACATGTTTAAACAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ATGAACACTTTTT-----AATACCAGATGTAAAGTGGTTTCTCCTAGCGTAAAGTCAGATTGCGTTAGTGACT-CAGTCCTGTGACAGCTTGCACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAACATTAATGATATGTTTGTTTGAGAATCAGCTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTGCATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051437 368 - 72318688 AAACTACAAGGACATAAAAGCCATTTGGGCACATCTTTTA-AAACATGTTTAAACAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ATGAATACTTTTT-----AATACCAGATGTAAAGTGGTTTCTCCTAGCGTAAAGTCAAATTGCATTAGTGACT-CAGTCCTATGACAGCTTGCACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAACATTAATGATATGTTTGTTTGAGAATCAGCTTAAATGTCTGCATACGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATACTTTTGCATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385063 368 - 1517660 AAACTACAAGGACATAAAAGCCATTTGGGCACATCTTTTA-AAACATGTTTAAACAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAA--ATGAACACTTTTT-----AATACCAGATGTAAAGTGGTTTCTCCTAGCATAAAGTCAAATTGCGTTAGTGACT-CAGTCCTGTGACAGCTTGCACCCTGGAGATTATCTCTTCAAAGTGCAGAGACAGACTGAAAAACATTAATGGTATGTTTGTTTGAGAATCAGCTTAAATGTCTGCATATGAAATACTGAAATAATGTTTCTTAG--C--AGAG----------TCATATTTTTGCATTTGTTAAGACAATATAGTAGGGAATACTAATTTTATTTTGAA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105248735 364 + 117903854 AAACTACAAGGACATAAAAACAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAAACACAAACACTTTTT-----AATACCAGATGTGAAATGGTTTCTTCTAGTATAAAGTCAAAATGCATTAGTGACT-CAG-CCTGTGACAGCGTGCACCCTGGAGATTATCTCTTTAAAGTGCAGAGACAGACTGAAAAAT----GTGACATGTTAGTTTGAGAATCAACCTAAATATCTGCATATGAAATACTGA---AATGTTTCTTAG--CAGAGAG----------TTACATTTTTGAATTTGGTAAGATAATATAGTAAGGAGTACTAATTTTACTTTGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441451 365 - 31320352 AAACTACAAGGACATAAAAACAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATCATGATTTAACAAATTCTGCCAAGAACTGTCACAAGAG-----GCAAGAAACACAAACACTTTTC-----AATACCAGATGTGAAATGGTTTCTTCTAGTGTAAAGTCAAAATACATTAGTGACT-CAG-CCTGTGACAGCTTTCACCCTGAAGATTATCTCTTTAAAGTGCAGAGACAGACTGAAAAAT----TTGAC--GTTTGTTGGAGAATCAACCTAAATATCTGCATATGAAATATTGAAATAATGTTTCTTAG--CAGAGAG----------TTACATTTTAGAATTTGGTAAGACAATATAGTAAGGAATACTAATTTTACTTTGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1636869 367 + 2203405 AAACTACAAGGACATAAAAACAATTTGGGCACATCTTTTA-AAACATGTTTAAATAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAAACACAAACACTTTTT-----AATACCAGATGTGAAACGGTTTCTTCTAGTATAAAGTCAAAATACATTAGTGACT-CAG-CCTGTGACAGCTTGCACCCTGGAGATTATCTCTTTAAAGTGCAGAGACAGACTGAAAAAA----TTGACACGTTTGTTGGAGAATCAACCTAAATATCTGCATATGAAATACTGAAATAATGTTTCTTAG--CAGAGAG----------TTACATTTTTGAATTTGGTAAGACAGTATAGTAAGGAATACTAATTTTACTTTGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3588802 364 - 14941987 AAACTACAAGGACATAAAAACAATTTGGGCACATCTTTT--AAACATGTTTAAATAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCACAAGAA-----GCAAGAAACACAAACACTTTTT-----AATACCAGATGTGAAATGGTTTCTTCTAGTATAAAGTCAAAATACATTAGTGACT-CAG-CCTGTGACAGTTTGCACCCTGGAGATTATCTCTTTAAAGTGCAGAGACAGACTGAAAAAT----TTCAC--GTTTGTTTGAGAATCAACCTAAATATCTGCATATGAAATACTGAAATAATGTTTCTTAG--CAGAGAG----------TAACATTTTTGAATTTGGTAAGACAATATAGTAAGGAATACTAATTTTACTTTGAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1259046 369 - 1406956 AAACTACATAGACATAAAAGCAATTTGGACACATC-TTTA-AAAAACGTTTAAATAAACATTATGATTTAACAAACTCTGCCAAGAACTGTCAAAAGAA-----GCAAGAAACATGAACACTTTTT-----TATGCCAGATGTGAAGCAGTTTCTCTTAGTGTAAAGTCAAAATACATTAGTGACT-CAGCGCTGTGACAGCTAGTACCCTGGAGATTATCTCTTTAAAGTGCAGAGACAGACTGATGAAA-TTAATGATACGTTTGTGTGAGACTCAACCTAAATGTCTGCATATAAAATACTGCAATAATGTTTCCTAG--CAGAGAG----------TCGCATTTTT-AATTTGGTAAGATAATACAGTAAAGAATGCTAATTTTATTTTGAA i proCoq1.NW_012148742v1 C 0 I 21 s mm10.chr1 111831030 366 + 195471971 AAATGACATGGACA-------AATCTGAACTCATGTATCACAAAAATGTTTAAATAAAC---ATGATTTAACAAACTCTGCCAAGGACTGTCAAAAGCT-----GTGAGAAGCATGAACACTTTTTTTTTAAATGCCAGATATGAAGCAGTTTCTCCTAAAGTAATGTCAAACTATATTAGTGTCCACAACACTATGAGAGCTGATACTCTGGAGACTGTCTTGTTAAACTGCAGAGATTGACTGAGGAAA-TTAACGATACATTTCTGTGAGATTCAACTT-AATGTATAAATGTATAA-AGGGGAGTAATATCCCTTAGATC--AGAG----------TCACATTTCCAAATCCACTCACATAATACAGTAAGGAATAAAAATTTTACAGTGAC i mm10.chr1 C 0 I 27 s canFam3.chr1 112297149 367 - 122678785 AAACTACATGAAAATAAAAGCAATTTGAGCACATC-TTTA-AAAAATGTTTAAATAAACATTATGGTTTAACAACTTCTACCAAGCACTGTCAAAAGAA-----GCAAGAAACATGAACACTTTTT-----AATACCAGATGTGAAATAGTTCCTCCTAGCGTGAAGTCTAAATACATTAGTGACT-CAGCTCTGTGACAGCCAGCACCCTGGAGATTATCTCTTTTAAGTGCAGAAACAGACCGAGAAAA-TTAATGATATGTTTGTGAGAGATTCAACCTAAATGTCTGCATA-GAAATACAAGAATAATTTTTCCTTG--CAGATAG----------TCATATTGTC-AATTGGTTAAGATAATATAATAAGGA-TGCTATTTTACTTTTGAA i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 471284 375 - 2150887 aaTTTACATAGAAACAAAAACAATTCGGGCACATCTTT---AAAAATGTTTAAGTAAACACTATGTTTT-TTAAACTCTCCCAAGAACTGTCAAAAAAAAAAAGACAAGGAACATGAACACT-TTG-----AATACCAGATGTGAAGTGGTCTCCCCTAGTGAGAAGTCAAAATACTTTAGTGCCT-CAGTGCTGTGACAGCTAGCACCCTGGAGATAGTCTCTTTAAA--GCAGCAAAAGACTGAGGAAA-TTAATGATATGTTTCTGTTAGACTCAACCTAAACGTCTACATATAAAATACTTGAATAATGTTTCCAAG--C--AGAGAGTCATGGAATCATATTTTCAAATGTGG-AATACAGT--AGTAAGAAATGCTAACTTCACTTCTGA i dasNov3.JH575754 I 889 C 0 e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=435644.000000 s hg38.chr18_GL383571v1_alt 122765 46 + 198278 --TCTTTCATTAGTATT-------TCCAACT-TTCAGGGCACCACATACAGTTTTG s panTro5.chr18 65032787 46 + 78221452 --TCTTTCATTAGTATT-------TCCAACT-TTCAGGGCACCACATACAGTTTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151889 46 + 77229886 --TCTTTCATTAGTATT-------TCCAACT-TTCAGGGTACCCCATACAGTTTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371394 46 + 17472758 --TCTTTCATTAGTATT-------TCCAACT-TTCAGGGCACCACATACAGTTTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411865 46 - 152096393 --TCTCTCATTAGTATT-------TCCAACT-TTCAGGGCACTACATACAGTTTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361131 46 + 70235451 --TCTCTCATTAGTATT-------TCCATCT-TTCAGGGCACCACATACAGTTTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052529 46 - 75711847 --TCTCTCATTAGTATT-------TCCATCT-TTCAGGGCACCACATACAGTTTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611762 46 - 18804593 --TCTCTCATTAGTATT-------TCCATCT-TTCAGGGCACCACATACAGTTTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222178 46 + 18905526 --TCTCTCATTAGTATT-------TCCATCT-TTCAGGGCACCACATACAGTTTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051805 46 - 72318688 --TCTCTCATTAGTATT-------TCCATCT-TTCAGGGCACCACATACAGTTTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385431 46 - 1517660 --TCTCTCATTAGTATT-------TCCATCT-TTCAGGGCACCACATACAGTTTTG i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105249099 47 + 117903854 --TCCTTCATTGGTATT-------TGCAGCTGGTCAGGGTACCACATACAGTTTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441816 47 - 31320352 --TCTCTCATTCGTATT-------TGCAGCTGGTCAGGGTACCACATACAGTTTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637236 47 + 2203405 --TCTCTCATTAGTATT-------TGCAGCTGGTCAGGGTACCACATACAGTTTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589166 47 - 14941987 --TCTCTCATTAGTATT-------TGCAGCTGGTCAGGGTACCACATACAGTTTTG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831423 47 + 195471971 --CCTTTTGTTGTTGTTGTTTTGCTTCATCT-TC-----TGCCACA-AGAGTTTAA i mm10.chr1 I 27 C 0 s canFam3.chr1 112297517 47 - 122678785 --CCCCTGTTCAATATC-------GCCAACTGATCAGGGCACCAAACACAGTTTTG i canFam3.chr1 I 1 I 27 s dasNov3.JH575754 471659 49 - 2150887 ATTTCCACTTCAGCAAT-------GCTAGCTGATCAAGGTACCACATACAgttttg i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=3362131.000000 s hg38.chr18_GL383571v1_alt 122811 371 + 198278 ------------------------ACAGG-AGAAT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGATATACCTGCCCCATATGGAGGAAGGAGTGTCACcttgtcaagtcaggcactttgcaggactttatccatccagaaaggacatcttttcctagatttcacaaaggttttctatggactggtgACAGAT-CAGCATGTGATACAACAGACCACTATTCAAAATATAAAACCAAATATAATATCTTTGGCTAAAGTAGT-ATCT-AAAT--------------------ATCATAAG-TTTGCAATCATCCCTTTACATGGTTTGAAGTGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATCGATAAAGTAGAAATTTGCCTGAAATGTGTT s panTro5.chr18 65032833 371 + 78221452 ------------------------ACAGG-AGAAT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGATATACCTGCCCCATATGGAGGGAGGAGTGTCACCTTGTCAAGTCAGGCACTTtgcaggactttatccatccagaaaggacatcttttcctagatttcacaaaggttttctatggactggtgACAGAT-CAGCATGTGATACAACAGACCACTATTCAACATATAAAACCAAATATAATATCTTTGGCTAAAGTAGT-ATCT-AAAT--------------------ATCATAAG-TTTGCAATCATCCCTTTACATGGTTTGAAGTGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATCGATAAAGTAGAAATTTGCCTGAAATGTGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64151935 371 + 77229886 ------------------------ACAGG-AGAAT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGATATACCTGCCCCATATGGAGGAAGGAGTGTCACCTTGTCAAGTCAGGCACTTtgcaggactttatccatccagaaaggacatcttttcctagatttcacaaaggttttctatggactggtgACAGAT-CAGCATGTGATACAACAGACCACTATTCAAAATATAAAACCAAATATAATATCTTTGGCTAAAGTAGT-ATCT-AAAT--------------------ATCATAAG-TTTGCAATCATCCCTTTACATGGTTTGAAGTGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATCGATAAAGTAGAAATTTGCCTGAAATGTGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371440 371 + 17472758 ------------------------ACAGG-AGAAT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGATATACCTGCCCCATATGGAGGAAGGAGTGTCACcttgtcaagtcaggcactttgcaggactttatccatccagaaaggacatcttttcctagatttcacaaaggttttctatggactggtgACAGAT-CAGCATGTGATACAACAGACCACTATTCAAAATATAAAACCAAATATAATATCTTTGGCTAAAGTAGT-ATCT-AAAT--------------------ATCATAAG-TTTGCAATCATCCCTTTACATGGTTTGAAGTGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATCGATAAAGTAGAAATTTGCCTGAAATGTGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139411911 371 - 152096393 ------------------------ACAGG-AGAAT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGATATACCTGCCCCATATGGAGGAAGGAGTGTTACCTTGTCAAGTCAGGAACTTtgcaggactttatccatccagaaaggacatcttttcctagatttcacaaagattttctatggactggtgACAGAT-CAGCATGTGATAGAACAGACCACTATTCAAAATATAAAACCAAATATAACATCTTTGGCTAAAGTAGT-ATCT-AAAT--------------------ATCGTAAG-TTTACAATCATCCCTTTGCATGGTTTGAAGTGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATCGATAAAGTAGAAATTTGCCTGAAATGTGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361177 371 + 70235451 ------------------------ACAGG-AAAGT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGACTGGC-ATGGGGCTATACCTGCCCCATATGGAGGAAAGAGTGTTAActtgtccagtcaggcactttgcagggctttatccatccagaaaggacatcttttcctcgattgcacaaaggttttctatggaccagtgACAGAT-CAGCATGTGACAGAACTGACCACTATTCAAAACATAAAACCAAATATAACATCTTTGGCTAAAATAGT-ATCT-AAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGTCGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATTGATAACGTAGAAATTTGCCTGAAATGTGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052575 371 - 75711847 ------------------------ACAgg-aaagt----aggagcagaaattcagcctgaggtccactt-actaaactgggactggc-atggggctatacctgccccatatggaggaaagagtgTTAActtgtcaagtcaggcactttgcagggctttatccatccagaaaggacatcttttcctcgattgcacaaaggttttctatggaccagtgACAGAT-CAGCATGTGACAGAACTGACCACTATTCAAAACATAAAACCAAATATAACATCTTTGGCTAAAATAGT-ATCT-AAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGTCGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATTGATAACGTAGAAATTTGCCTGAAATGTGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13611808 371 - 18804593 ------------------------ACAGG-AAAGT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGACTGGC-ATGGGGCTATACCTGCCCCATATGGAGGAAAGAGTGTTAActtgtcaagtcaggcactttgcagggctttatccatccagaaaggacatcttttcctcgattgcacaaaggttttctatggaccagtgACAGAT-CAGCATGTGACAGAACTGACCACTATTCAAAACATAAAACCAAATATAACATCTTTGGCTAAAATAGT-ATCT-AAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGTCGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATTGATAACGTAGAAATTTGCCTGAAATGTGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222224 372 + 18905526 ------------------------ACAGGAAAAGT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGCTATGCCTGCCCCATATGGAGGAAGGAGTGTCAACGTgtcaagtcaggcactttgcagagctttatccatccagaaaggacatcttttcctcgattgcacaaaggttttctatagaccagtgACAGAT-CAGCATGTGATAGAACAGACCACTATTCAAAACATAAAACCAAATATAACATCTTTGGCTAAAATAGT-ATCT-AAAT--------------------ATCGTAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGCGGTGGTAG---------------------------T------------AATGGTGATCACATTTTGGATT--TATTGATAACGTAGAAATTTGCCTGAAATGTGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60051851 371 - 72318688 ------------------------ACAgg-aaagt----aggagcagaaattcagcctgaggtccactt-actaaactggggctggc-atggggctatacctgccccatatggaggaaagagtgtcaacttgtcaagtcaggcactttgcagggctttatccatccagaaaggacatcttttcctcgattgcacaaaggttttctatggactggtgACAGGT-CAGCATGTGATAGAACAGACCACTATTCAAAACATAAAACCAAATATAACATCTTTGGCTAAAATAGT-ATCT-AAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGTGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATTGATAACGTAGAAATTTGCCTGAAATGTGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385477 372 - 1517660 ------------------------ACAGGAAAAGT----AGGAGCAGAAATTCAGCCTGAGGTCCACTT-ACTAAACTGGGGCTGGC-ATGGGGCTATGCCTGCCCCATATGGAGGAAGGAgtgtcaacttgtcaagtcaggcactttgcagagctttatccatccagaaaggacatcttttcctcgattgcacaaaggttttctatggaccagtgACAGAT-CAGCATGTGATAGAACAGACCACTATTCAAAACATAAAACCAAATATAACATATTTGGCTAAAATAGT-ATCT-AAAT--------------------ATCGTAAG-TTTATAATCATTCCTTTGCATGGTTTGAAGCGGTGGTAC---------------------------T------------AATGGTGATCACATTTTGGATT--TATTGATAATGTAGAAATTTGCCTGAAATGTGTT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105249146 406 + 117903854 ------------------------AC----Agaac----aggagcggaaattcagcctgaggtacactt-actaaactggggttggc-atggggctgtacctg-cccatacggaggaataagtgtcACcttgtcaagtcaggcatatttcagggctttatccatccagaaaggacgtcttttcctagattttacaaaggttttctatggactggtgACAGAT-CAGCATGTTACAGAACAGACTATTATTCAAAATATAAAACCAAATATAACATATTTGCCTAAAGTCGC-AGTT-AAAT--------------------ATCATAAG-TTTATGATCATTCCTTTGCATGGTTTGAAGTGGTGGTACTTCACTGCAAATGAATGGCAATCATATTTCACTTCAAATGAATGGTGATCACATTTTCAATT--TATTGATAAAGTAGAAATTTGCTTGAAATGTGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19441863 382 - 31320352 ------------------------ACAGG-AGAAC----AGGAGCAGAAATTCAGCCTGAGTTACACTTAACTAAACTGGGGTTGGC-ATGGGGCTGTACCTGCCCCATATGGAGGAAGGAGTGTCACCTTGTCAAGTCAGGCACATTTcagggctttatccatccagaaaggacatcttttcctagattttacaaaggttttctatggagtggtgacAGAT---GCATGTTATGGAACAGAACATTATCCAAATTTTAAAACCAAATGTAACATATTTGACTAAAGTCAC-AGTT-AAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGTGATGGTCC---------------------------TTTACTTCAAATGAATGGTGATCACATTTTCAATT--TATTGATAAAGTAGAAATTTGTTTGAAATGTGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637283 383 + 2203405 ------------------------ACAGG-AGAAC----AGGAGCAGAAATTCAGCCTGAGTTACACTT-ACTAAACTGGGGTTGGC-ATGGGGCAGTACCTGCCCCATACGGAGGAGGAAGTGTCACCTTGTCAAGTTAGGCATATTTcagggctttatccatccagaaaggacatcttttcctagattttacaaaggttttctatggactggtgACAGAT-CAGCATGTTAAAGAACAGACCATTATCCAAATTTTAAAACCAAATATAACATATTTGACTAAAGTTGC-AGTT-AAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGGGGTGGTAC---------------------------TTCACTTCAAATGAATGGTGATCACATTTTCGATT--TATTGATAAAGTAGAAATTTGCTTGAAATGTGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589213 378 - 14941987 ------------------------ACAGG-AGAAC----AGGAGCAGAAATTCAGCCTGAGGTACACTT-ACTAAACTGGGGTTGGC-ATGGGGCTGTACCTGCCTCATATGGAGGAAGGGGTGTCACCTTGTCAAGTCAGGCATATTTCAGGGCTTTATCCATCCAGAAAGGACATCTTTTCCCAGATTTTACAAAGGTTTTCTATGGACTGGTGACAGAT-CAGCATGTTACAGAACAGATCATTATTCAAAATATAAAACCAAATATA------TTGACTAAAGTCGC-AGTTAAAAT--------------------ATCATAAG-TTTACAATCATTCCTTTGCATGGTTTGAAGTGGTGGTAC---------------------------TTCACTTCAAATGAATGGTGATCACATTTTCGATT--TATTGATAAAGTAGAAATTTGTTTGAAATGTGTT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831470 349 + 195471971 ------------------------TCAAA-AGAATAAAGAGGAGCATAAATTTAACCTGGGGTTCACAC-ACTAAGCAGAATGTGACAATGGGGCTGGTTTTGCCAGACATGAAAATTAAAGCATTCACTTGCTAAGTCATGCAC-CTGAAGTGCTCCACCCATGTAAAAAGGACAGCTTTCCCTACCGTTGGTAACAGTTTTCTATGGAGTAGCAATTAATTTTGCATATAAT--------TTACTAT---------------GACAATAATTTATTTGTTTAAGTGGAT-GTTT-AGGT--------------------ACAAAATGACTCAGAATTGGTCTTTTGTATTCTAGAAAGTGGTAGACC---------------------------T------------AAT-ATGGTGGAATTTTGAATTTGTATTGATAAAGTATGAATTTGTCTGACA------ i mm10.chr1 C 0 C 0 s dasNov3.JH575754 471708 360 - 2150887 ccctgaaccatggtgctttgccaaaaggg-caagt----gggagcagaaattcagccaaaggtcagctt-acca-------gccAGC-ATGGGGCTGCAGCTGCC-----TGAAGGAAGAGGC---------------------CACTGCAGGGCTATAGAGACCCAG--AGGGCAGCTACT-CTCGTTTGCACAAAGATGCTCTAGGGACTCGTGACAGGT-CTGCACACAAT-GTACAGATTA--------AATAT---------CATAGAATTTTTGGCTAAAGTGGTGGGtt-aaataaataaaataaagaaataaaataataaG-CTCACAATGGTTCTTCTGCATTATTTCAAGTAGTGATAC---------------------------T------------AATGATGACTGCATTTTGGATT--TATT--CAGAGTAGAAATTTGCCTGAAATACACT i dasNov3.JH575754 C 0 I 22 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=348828.000000 s hg38.chr18_GL383571v1_alt 123182 41 + 198278 GATAGGTATTATCTTGTTTTGCTTATATAAGTACACAGGCC s panTro5.chr18 65033204 41 + 78221452 GATAGGTATTATCTTGTTTTGCTTATATAAGTACACAGGCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152306 41 + 77229886 GATAGGTATTACCTTGTTTTGCTTATATAAGTACACAGGCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371811 41 + 17472758 GATAGGTATTATCTTGTTTTGCTTGTATAAGTACACAGGCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412282 41 - 152096393 GATAGGTATTATCTTGCTTTGCTTATATAAGTACACAGGCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361548 41 + 70235451 GACAGGTATTATCTTACTTTGCTTATATAAGTACACAGGCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052946 41 - 75711847 GACAGGTATTATCTTACTTTGCTTATATAAGTACACAGGCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612179 41 - 18804593 GACAGGTATTATCTTACTTTGCTTATATAAGTACACAGGCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222596 41 + 18905526 GACAGGTACTATCTTATTTTGCTTCTATAAGTACACAGGCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052222 41 - 72318688 GACAGGTATTATCTTATTTTGCTGATATAAGTACACAGGTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385849 41 - 1517660 GACAGGTATTATCTTATTTTGCTTCTATAAGTACACAGGCC i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105249552 41 + 117903854 CCCAGATACTATCTTATTTTGCTTATATAAGTACACAGGCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19442245 41 - 31320352 CCCAAATATTATCTTATTTTGTTTATATAAGTACACAGGCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637666 41 + 2203405 CCCAGATATTATCTTATTTTGCTTATATAAGTACACTGGCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589591 41 - 14941987 CCCAGATACTATCTTATTTTGCTTATGTAAGTACACAGGCC i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831819 34 + 195471971 -----AAATGATCTTATTTTGATCATACAAATTCATGGG-- i mm10.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472068 22 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=537559.000000 s hg38.chr18_GL383571v1_alt 123223 59 + 198278 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA s panTro5.chr18 65033245 59 + 78221452 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152347 59 + 77229886 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371852 59 + 17472758 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412323 59 - 152096393 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361589 59 + 70235451 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63052987 59 - 75711847 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612220 59 - 18804593 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222637 59 + 18905526 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052263 59 - 72318688 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385890 59 - 1517660 AAGTTAATATGAGTAAATGTCTATCAATGTCCAAGATTTGTAACTTC---------TATCTTAGTATA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105249593 59 + 117903854 AAATTAATATGAATAGATGACTATCAATGTCCAAGAGTTGTAATTTA---------TATCTTAGTAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19442286 59 - 31320352 AAATTAATATGAGTAGACGTCTATCAGTGTCCAAGATTTGTAATTTA---------TATCTTAGTATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637707 59 + 2203405 AAATTAATATGAGTAGATGTCTATCAATGTCCAAGATTTGTAATTTA---------TACCTTAGTATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589632 59 - 14941987 AAATTAATATGAGTAGATGTCTATCAATGTCCAAGATTTGTAATTTA---------TATCTCAGTATA i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831853 29 + 195471971 ---------------------------TGTAC---ATTTGCAATCTC---------TGCCATGGTATA i mm10.chr1 C 0 C 0 s dasNov3.JH575754 472090 62 - 2150887 AAATTTCTATG------TATTCATTAATTACTGAGATTTCAAAACTCAGGATTATTTTTTTTCATTTA i dasNov3.JH575754 I 22 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3484457 1730 + 6513552 M a score=1055190.000000 s hg38.chr18_GL383571v1_alt 123282 103 + 198278 ------------ATTATGCAATTAAAAAATGTTTCTC---TATG-TTCTGTACC--TACTGAAAGC-----------TATGATTTGC----TACGATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAGTA s panTro5.chr18 65033304 103 + 78221452 ------------ATTATGCAATTAAAAAATGTTTCTC---TATG-TTCTGTACC--TACTGAAAGC-----------TATGATTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152406 103 + 77229886 ------------ATTATGCAATTGAAAAATGTTTCTC---TATG-TTCTGTACC--TACTGAAAGC-----------TATGATTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5371911 103 + 17472758 ------------ATTATGCAATTAAAAAATGTTTCTC---TATG-TTCTGTACC--TACTGAAAGC-----------TATGATTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412382 103 - 152096393 ------------ATTATGCAATTAAAAAATGTTTCTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361648 103 + 70235451 ------------ATTATGCAATTCAAAAATGTTTTTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053046 103 - 75711847 ------------ATTATGCAATTCAAAAATGTTTTTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612279 103 - 18804593 ------------ATTATGCAATTCAAAAATGTTTTTC---TATG-TTCTGTACC--TACTGAAAGC-----------TATGACTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222696 107 + 18905526 ------------GTTATGCAATTCAAACATGTTTTTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGCTGTATACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052322 103 - 72318688 ------------ATTATGCAATTCAAAAATGTTTTTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGC----TACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 385949 107 - 1517660 ------------ATTATGCAATTCAAACATGTTTTTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGCTGTATACAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486187 103 + 6513552 ------------ATTATGCAATTCAAAAATGTTTTTC---TGTG-TTCTGTACC--TACTGAAAGG-----------TATGACTTGC----TGCAATCCTTTCTCGGTAAGCTATGAAGGGGAAACTGAGTGAATA i colAng1.NW_012115433v1 M 1730 C 0 s calJac3.chr13 105249652 103 + 117903854 ------------ATGATGAAATTCAAAAATATTGCTC---TACG-TTCTGTACC--TCCTGAAAGG-----------TATGATGTGC----TACAGTCTTTTCTCTGTAAGCTATGAAGGGGAAACTGAGTGAGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19442345 103 - 31320352 ------------ATTATGAAATTCAAAAATATTTCTC---GATG-TTCTGTACC--TACTGAAAGG-----------TATAATTTGC----TACAGTCTTTTCTCTGTAAGCTGTGAAAGGGAAACTGAGTGAGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637766 103 + 2203405 ------------ATTATGAAATTCAAAAATATTTCTC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGATTTGC----TACAGTCTTTTCTCTGTAAGCTATGAAAGGGAAACTGAGTGAGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589691 103 - 14941987 ------------ATTATGAAATTCAAAAATATTTCCC---TATG-TTCTGTACC--TACTGAAAGG-----------TATGATTTGC----TACAGTCTTTTCTCTGTAAGCTATGAAGGGGAAACTGAGTGAGTA i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831882 93 + 195471971 -------------------ATTTCAGAAATTTATATT---TTTGATTTTACGAT--TATTGCA--------------TATTATTTCT----TGAAATTCCTTCATTGTAGACTA-AAAAGCCATATTTCATGGGAA i mm10.chr1 C 0 C 0 s dasNov3.JH575754 472152 128 - 2150887 ATTTTTTGTTCTCTCTTGAAAT---AAAATACCCCTCAGAGATA-TTTTGTACTAATAGTTAACAGTGTTTTTATAATATGATTTCT----TGCAAGCCTTTCTTGGTAAGCTATGAAGGGAAAATTAGATGGATA i dasNov3.JH575754 C 0 I 39 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=267631.000000 s hg38.chr18_GL383571v1_alt 123385 25 + 198278 GTAGTTATTTAGTACCAAGGACTTG s panTro5.chr18 65033407 25 + 78221452 GTAGTTATTTAGTACCAAGGACTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152509 25 + 77229886 GTAGTTATTTAGTACCAAGGACTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372014 25 + 17472758 GTAGTTATTTAGTACCAAGGACTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412485 25 - 152096393 GTAGTTATTTAGTACCAAGGACTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361751 25 + 70235451 GTAGTTATTTAGTACCAAGGACTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053149 25 - 75711847 GTAGTTATTTAGTACCAAGGACTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612382 25 - 18804593 GTAGTTATTTAGTACCAAGGACTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222803 25 + 18905526 GTAGTTATTTAGTACCAAGGACTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052425 25 - 72318688 GTAGTTATTTAGTACCAAGGACTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386056 25 - 1517660 GTAGTTATTTAGTACCAAGGACTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486290 25 + 6513552 GTAGTTATTTAGTACCAAGGACTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105249755 25 + 117903854 GTAGTTATTTAGTACCAAGTAATTG i calJac3.chr13 C 0 I 306 s saiBol1.JH378121 19442448 25 - 31320352 GTAGTTATTTAGTACCAAGGACTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637869 25 + 2203405 GTAGTTATTTAGTACCAAGGACTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589794 25 - 14941987 GTAGTTATTTAGTACCAAGGACTTG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831975 15 + 195471971 GTAATT-TTTAGCTTT--------- i mm10.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=1092910.000000 s hg38.chr18_GL383571v1_alt 123410 116 + 198278 AAGAATAAAAAATACTTCTGCATATTTAAGTGCTGACATAGA-TATTT------------TAGTG-------------TCAGAAGAAGATGTTCATTATACATTGTTATATGAAATAAATAGATTACCAAAAAT-ATTTTATA s panTro5.chr18 65033432 113 + 78221452 AAGAATAAAAAATACTTCTGCATATTTAAGTGCTGACATAGA-TATTT------------TAGTG-------------TCAGAAGA---TGTTCATTATACATTGTTATGTGAAATAAATAGATTACCAAAAAT-ATTTTATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152534 113 + 77229886 AAGAATAAAAAATACTTCTGCATATTTAAGTGCTGACATAGA-TATTT------------TAGTG-------------TCAGAAGA---TGTTCATTATACATTGTTATGTGAAATAAATAGATTACCAAAAAT-ATTTTATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372039 116 + 17472758 AAGAATAAAAAATACTTCTGCATATTTAAGTGCTGACATAGA-TATTT------------TAGTG-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATAAATAGATTACCAAAAAT-ATTTTATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412510 113 - 152096393 AAGAATAAAGAATACTTCTGCATATTTAAATGCTGACATAGA-TATTT------------TAGTG-------------TCAGAAGA---TGTTCATTATACATTGTTATGTGAAATAAATAGATTACCAAGAAT-ATTTTATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361776 117 + 70235451 AAGAATAAAAACTACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTA-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053174 117 - 75711847 AAGAATAAAAACTACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTA-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612407 117 - 18804593 AAGAATAAAAACTACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTA-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222828 117 + 18905526 AAGAATAAAAAATACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTA-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052450 117 - 72318688 AAGAATAAAAAATACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTA-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386081 117 - 1517660 AAGAATAAAAAACACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTG-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486315 117 + 6513552 AAGAATAAAAAATACTTCTGCATATTTAAATGCTGAAGTAGA-TATTT------------TAGTA-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATACATAGATTACAAAAAATAATTTTATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105250086 109 + 117903854 aaaaaaaaaaaaTACTTCTGCATATTTAAATGCTGATAGAGA-TATTT------------TAGTG-------------TC---AGAAGATGTTCTTCATACATTGTTATGTG----AAATCGATTACAAAAAAT-ATTTTATG i calJac3.chr13 I 306 C 0 s saiBol1.JH378121 19442473 116 - 31320352 AAAATTTAAAAATACTCCTGCATATTTAAATGCTGATATAGA-TATTT------------TAGTG-------------TCAGAAGAAGATGTTTATTATACATTGTTATGTGAAATAAATAGATTATGAAAAAT-ATTTTATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1637894 116 + 2203405 AAAAGTAAAAAATACTTCTGCATATTTAAATGCTGATATAGA-TATTT------------TAGTG-------------TCAGAAGAAGATGTTCATTATATATTGTTATATGAAATAAATTGATTATGAAAAAT-ATTTTATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3589819 116 - 14941987 AAAATTAAAAAATACTTCTGCATATTCAAATGCCGATATAGA-TATTT------------TACTG-------------TCAGAAGAAGATGTTCATTATACATTGTTATGTGAAATAAATAGATTACGAAAAAT-ATTTTATG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111831990 138 + 195471971 AGGAATACAAAGTATTTTTAC--ATTTAAAAGCTAATGAAAACTATTTAAAGGATTCTAATAGTGGTTTATGTGTAAACCACAGCAATATGTTTAT--TAAAGTATTATATGAAAGAAATTTCTGCCAAAACAT-ATGATACA i mm10.chr1 C 0 I 156 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=423517.000000 s hg38.chr18_GL383571v1_alt 123526 51 + 198278 TGACCTAATGCATA---------GTCTTTTGTGGGGAGGTATGGGTAATTACTCACAGAT s panTro5.chr18 65033545 51 + 78221452 TGACCTAATGCATA---------GTCTTTTGTGGGGAGGTATGGGTAATTACTCACAGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152647 51 + 77229886 TGACCTAATGCATA---------GTCTTCTGTGGGGAGGTATGGGTAATTACTCACAGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372155 51 + 17472758 TGACCTAATGCATA---------GTCTTTTGTGGGGAGGTATGGGTAATTACTCACAGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412623 51 - 152096393 TGACCTAATGCATA---------GTCTTTTGTGGGGAGGTATGGGTAACTACTCACAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361893 48 + 70235451 TAACCTAATGCGTA---------GTCTTTTGTGGGGAGGTAT-GGTAATTACT--CAGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053291 48 - 75711847 TAACCTAATGCGTA---------GTCTTTTGTGGGGAGGTAT-GGTAATTACT--CAGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612524 48 - 18804593 TAACCTAATGCATA---------GTCTTTTGTGGGGAGGTAT-GGTAATTACT--CAGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222945 48 + 18905526 TAACCTAATGCATA---------GTCTTTTGCGGGGAGGTAT-GGTAATTACT--CAGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052567 48 - 72318688 TAACCTAATGCGTA---------GTCTTTTGTGGGGAGGTAT-GGTAATTACT--CAGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386198 48 - 1517660 TAACCTAATGCATA---------GTCTTTTGCGGGGAGGTAT-GGTAATTACT--CAGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486432 44 + 6513552 TAACCTAATGCGTA---------GTCTTTTGTGGGGAGGTAT-GGTAATT------AGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105250195 60 + 117903854 TGACCTAATGCATATGAAAATTTGTCTTTTATGAAGAGGTATGGGTAATTACTCACAGAT i calJac3.chr13 C 0 I 620 s saiBol1.JH378121 19442589 60 - 31320352 TGACCTAATGCATATTAAAATTTGTCTTTTATGGGGAGGTATGGGTAATTACTCACAGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1638010 60 + 2203405 TGATCTAATGCATATTAAAATTTGTCTTTTATGGGGAGGTATGGGTAATTACTCACAGAT i cebCap1.NW_016107689v1 C 0 I 620 s aotNan1.NW_018502140v1 3589935 60 - 14941987 TGACCTAACGCATATTAAAATTTGTCTTTTATGGGGAGGTATGGGTAATTACTCACAGAT i aotNan1.NW_018502140v1 C 0 I 606 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=96285.000000 s hg38.chr18_GL383571v1_alt 123577 9 + 198278 AAAATTCTA s panTro5.chr18 65033596 9 + 78221452 AAAATTCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152698 9 + 77229886 AAAATTCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372206 9 + 17472758 AAAATTCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412674 9 - 152096393 AAAATTCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361941 9 + 70235451 AAAATTCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053339 9 - 75711847 AAAATTCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612572 9 - 18804593 AAAATTCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13222993 9 + 18905526 AAAATTCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052615 9 - 72318688 AAAATGCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386246 9 - 1517660 AAAATTCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486476 9 + 6513552 AAAATTCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105250875 9 + 117903854 aaaaTTCTA i calJac3.chr13 I 620 C 0 s saiBol1.JH378121 19442649 9 - 31320352 AAAATTCTA i saiBol1.JH378121 C 0 I 615 s cebCap1.NW_016107689v1 1638690 9 + 2203405 aaaaTTCTA i cebCap1.NW_016107689v1 I 620 C 0 s aotNan1.NW_018502140v1 3590601 9 - 14941987 aaaaTTCTA i aotNan1.NW_018502140v1 I 606 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=1299885.000000 s hg38.chr18_GL383571v1_alt 123586 133 + 198278 GAAGTACACAGGCCAAGATGTTACAATGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATATTTTCTAATGTTTCAATGATGC-TAAAGTTTATTTTTTTAATTGTCAAAAA s panTro5.chr18 65033605 133 + 78221452 GAAGTACACAGGCCAAGATGTTACAATGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATATTTTCTAATGTTTCAATGATGC-TAAAGTTTATTTTTTTAATTGTCAAAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152707 133 + 77229886 GAAGTACACAGGCCAAGATGTTACAATGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTATGCAGACATATTTTCTAATGTTTCAATGATGC-TAAAGTTTATTTTTTTAATTGTCAAAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372215 132 + 17472758 GAAGTACACAGGCCAAGATGTTACAATGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATATTTTCTAATGTTTCAATGATGC-TAAAGTTTA-TTTTTTAATTGTCAAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412683 133 - 152096393 GAAGTACACAGGCCAATATGTTACAATGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATATTTTCTAATGTTTCAATGATAC-TAAAGTTTATTTTTCTAATTGTCAAAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57361950 133 + 70235451 GAAGTACACAGGCCAAGATGTTACAGTGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTCAATGACGC-TAAAGTTTATTTTTTTAATTGTCAAAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053348 133 - 75711847 GAAGTACACAGGCCAAGATGTTACAGTGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTCAATGACGC-TAAAGTTTATTTTTTTAATTGTCAAAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612581 133 - 18804593 GAAGTACACAGGCCAAGATGTTACAGTGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTCAATGACGC-TAAAGTTTATTTTTTTAATTGTCAAAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13223002 133 + 18905526 GAAGTACACAGGCCAAGCTGTTACGGTGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTCAATGACGC-TAAAGTTTATTTTTTTAATTGTCAATAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052624 133 - 72318688 GAAGTACACAGGCCAAGATGTTACAGTGTTTATCTCCATTTCAGTAATCATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTTAATGACGC-TAAAGTTTATTTTTTTAATTGTCAAAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386255 133 - 1517660 GAAGTACACAGGCCAAGCTGTTACGGTGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTCAATGACGC-TAAAGTTTATTTTTTTAATTGTCAAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486485 131 + 6513552 GAAGTACACAGGCCAAGATGTTA--GTGTTTATCTCCATTTCAGTAATAATATATTTTTAAGTTATTCATTTGTGCAGACATGTTTTCTAATGTTTCAATGATGC-TAAAGTTTATTTTTTTAATTGTCAAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105250884 134 + 117903854 GAAGTACACATGCCAAGATGTTACCATGTTTATCTCCATTTCATTGACAATATATTTTTAAAGTATTCATTTGTGCAGACATATTTTCTAATGTTTTGATGACGTGTAAAGTTTATTGTTTTAATTGTCAAAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19443273 134 - 31320352 GAAGTACACATGCCAAGATGTTACCATGTTTATCCCCATTTTATTGACAATATATTTTTAAATTATTCATTTGTGCAGACATATTTTCTAATGTTTTGACGATGTGCAGAGTTTATTGTTCTAATTGTCAAAAA i saiBol1.JH378121 I 615 C 0 s cebCap1.NW_016107689v1 1638699 134 + 2203405 GAAGTACACATGCCAAGATGTTACCATGTTTATCTCCATTTCATTGAAAATATATTTTTAAATTATTCATTTGTGCAGACATATTTTCTAATGTTTCGATGACGTGTAAAGTTTATTGTTTTTATTGTCAAAAA i cebCap1.NW_016107689v1 C 0 I 263 s aotNan1.NW_018502140v1 3590610 134 - 14941987 GAAGTACACATGACAAGATGTTACCATGTTTATCTCCATTTCATTGACGATATATTTTTAAATTATTCATTTGTGCAGACATATTTTCTAATGTTTCAATGACGTGTAAAGTTTATTGTTTTAATTGTCAAAAA i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=397080.000000 s hg38.chr18_GL383571v1_alt 123719 66 + 198278 AAAAACCTTCTTTCCTTAGGGTAGTTTTTGCTACTAGGGAAGAGGAGCAAACAAGAAAATGAC----ATA s panTro5.chr18 65033738 66 + 78221452 AAACACCTTCTTTCCTTAGGGTAGTTTTTGCTACTAGGGAAGAGGGGCAAACAAGAAAATGAC----ATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152840 65 + 77229886 AAAC-CCTTCTTTCCTTAGGGTAGTTTTTGCTACTAGGGAAGAGGGGCAAACAAGAAAATGAC----ATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372347 65 + 17472758 AACC-CCTTCTTTCCTTAGGGTAGTTTTTGCTACTAGGGAAGAGGGGCAAACAAGAAAATGAC----ATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412816 63 - 152096393 AC---CGTTCTTTTCTTAGGGTAGTTTTTGCTACTAGAGAAGACGGGAAAATAAGAAAACGAC----ATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57362083 61 + 70235451 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGAC------A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053481 61 - 75711847 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGAC------A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612714 61 - 18804593 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGAC------A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13223135 61 + 18905526 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGAC------A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052757 67 - 72318688 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGACATATATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386388 61 - 1517660 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGAC------A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486616 65 + 6513552 AAAA-CCACCTT--CTTAGGATAGTTTTTGCTACTAGGGAAGAGGGGAAAACAAAAAAATGAC--ATATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251018 61 + 117903854 -GGC-TTATTTT--CTTTGGAGAATTTTTGCTATGAGAGAAGAGGGGAAAATAAGAAAA-Aat----ata i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19443407 62 - 31320352 -GAC-TTATTTT--CTTTGGAGAATTTTTGCTACGAAGGAAGAGGGGAAAACAAGAAAATAAC----ata i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3590744 62 - 14941987 -GAC-TTATTTT--CTTTGGAGAATTTTTGCTATGAGAGAAGAGGGGAAAACAAGAAAATGAC----ata i aotNan1.NW_018502140v1 C 0 I 156 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e cebCap1.NW_016107689v1 1638833 263 + 2203405 I a score=989340.000000 s hg38.chr18_GL383571v1_alt 123785 155 + 198278 --TGTATAtgc-tat-------------------cactctcattcagatcagcactatttcccgctagtaatatttcagtggatacctaagtgatctATTAATCCAAAATCTCtgtactagtcaggaattttcagagaaacagaatcaacagta--tgtgtgtatacgaaatttgctca s panTro5.chr18 65033804 155 + 78221452 --TGTATAtgc-tat-------------------cactctcattcagatcagcactatttcccgctagtaatatttcagtggatacctaagtgatctATTAATCCAAAATCTCtgtcctagtcaggaattttcagagaaacagaatcaacagta--tgtgtgtatacaaaatttgctca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64152905 155 + 77229886 --TGTATAtgc-tat-------------------cactctcattcagatcagcactatttcccgctagtaatatttcagtggatacctaagtgatctATTAATCCAAAATCTCTGTCCTAGtcaggaattttcagagaaacagaatcaacagta--tgtgtgtatacgaaatttgctca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372412 155 + 17472758 --TGTATATGC-TAT-------------------CACTCCCATTCAGATCAGCACTATTTCCTGCTAGTAATATTTCAGTGGATACCTAAGTGATCTATTAATCCAAAATCTCtgtactagtcaggaattttcagagaaacagaatcaacagta--tgtgtgtatacgaaatttgctca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139412879 153 - 152096393 --CGTATATGC-TCT-------------------CACTCTCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACATGATCTATTAATCCGAAATGTCtatactagtcaggaatgttcagagaaacagaatcaacag----tgtgtgtatacgaaatttgctca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57362144 157 + 70235451 --TATATATGC-TAT-------------------CACTCGCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACAGGATCTATCAATCCAAAATCTCtgtattagtcaggaacattcagagaaacagaatcaacagtacgtgtgtatatacaaaatttgctca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053542 157 - 75711847 --TATATATGC-TAT-------------------CACTCGCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACAGGATCTATCAATCCAAAATCTCtgtattagtcaggaacattcagagaaacagaatcaacagtacgtgtgtatatacaaaatttgctca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612775 157 - 18804593 --TATATATGC-TAT-------------------CACTCGCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACAGGATCTATCAATCCAAAATCTCtgtattagtcaggaacattcagagaaacagaatcaacagtacgtgtgtatatacaaaatttgctca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13223196 157 + 18905526 --TACATATGC-TAT-------------------CACTCGCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACAGGATCTATCAATCCAAAATCTCtgtattagtcaggaacattcagagaaacagaatcaacagtacgtgtgtatatacgaaatttgctca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052824 157 - 72318688 --TATATATGC-TAT-------------------CACTCTCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACAGGATCTATCAATACAGAATCTCTGTACTAGTCAGGAACATTCAGAGAAACATAATCAACAGTAAGTGTGTAtatacgaaatttgctca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386449 157 - 1517660 --TATATATGC-TAT-------------------CACTCGCATTCAGATCAGCACTATTTCCTGCTAGTAATATTCCAGTGGATACCTACAGGATCTATCAATCCAAAATCTCtgtattagtcaggaacattcagagaaacagaatcaacagtacgtgtgtatatacgaaatttgctca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486681 157 + 6513552 --TATATATGC-TAT-------------------CACTCTCATTCAGATCAGCACTATTTCCTGCTAATAATATTCCAGTGGATACCTACAGGATCTATCAATCCAAAATCTCtgtattagtcaggaacattcagagaaacagaatcaacagtacgtgtgtatatgcgaaatttgctca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251079 125 + 117903854 tatatatatatatat--------------------atTATCATTCAGATCAGCACTATATCCTGATAGTAATATTCAGGTGGATTG--------------------------------TAGTTAGGAATAGTCAGGGAAACAGAATCAATAGTC--TGTGTGTTTATGAAATTGGCTCA i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19443469 145 - 31320352 tatatatatatatatttacatttttatatatatacatTATCATTCAGATCAGCACTATATCCTGATAGTAATATTCAGGTGGATTC--------------------------------TAGTTAGGAATAGTCAGAGAAACAGAATCAACAGTC--TGTGTGTGTACGAAAGTGGCTCA i saiBol1.JH378121 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3590806 156 - 14941987 I e cebCap1.NW_016107689v1 1638833 263 + 2203405 I a score=2583401.000000 s hg38.chr18_GL383571v1_alt 123940 447 + 198278 catgattatggaggctgcgaagtcccaatatctgcattcagcatgctggagacccatcagagctgatgatgatgcagttccagcctaagtccaaagtcctgagaaccagggaagtcaatggtgaacattcgagtccgaaagctggcagggtaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaagcagtcaggcaggggcagttccagcttactcagattttttgttctattcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttaccccaaaacacttcacagacaaatctgtaataatgtttgaccaaatatctgggcacccagtcaagtagatacataaaattaatcattgcaCATG s panTro5.chr18 65033959 447 + 78221452 catgattatggaggctgcgaagtcccaatatctgcattcagcatgctggagacccatcagagctgatgatgatgcagttccagcctaagtccaaagtcctgagaaccagggaagtcaatggtgaacattcgagtccgaaagctggcagggtaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaagcagtcaggcaggggcagttccagcttactcagattttttgttctattcaggcctgcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttaccccaaaacacttcacagacaaatctgtaataatgtttgaccaaatatctgggcacccagtcaagtagatacataaaattaatcattgcaCGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64153060 447 + 77229886 cgtgattatggaggctgcgaagtcccaatatctgcattcagcatgctggagacacatcagagctgatgatgatgcagttccagcctaagtccaaagtcctgagaaccagggaagtcaatggtgaacattcgagtccgaaagctagcagggtaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaagcagtcaggcaggggcagttccagcttactcagattttttgttctattcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccacctaccaattcaaatattaatcttaccccaaaacacttcacagacaaatgtgtaataatgtttgaccaaatatctgggcacccagtcaagtagatacataaaattaatcattgcaCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5372567 447 + 17472758 catgattatggaggctgcgaagtcccaatatctgcattcagcatgctggagacccatcagagctgatgatgatgcagttccagcctaagtccaaagtcctgagaaccagggaagtcaatggtgaacattcgagtccgaaagctggcagggtaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaagcagtcaggcaggggcagttccagcttactcagattttttgttctattcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctatcaattcaaatattaatcttaccccaaaacacttcacagacaaatctataataatgtttgaccaaatatctgggcacccagtcaagtagatacataaaattaatcattgcaCATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139413032 446 - 152096393 catgattatggaggctgtgaagtcccaatatctgcattcagcatgctggagacccatcagagctgatgatgatgcagttccagcctaagtccaaagtcctgagaaccagggaagtcaatggtgaacattcgagtccgaaagctggcagggtaaaaacccaagagtcagtgttttagttcatgtcccaaagcaggaaaagatcaaagttccagctcaaagcagtcaggcaggggcagttcctgcttactcagattttttgttctattcaggccttcaactgattggatgagggccattcgtattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttaacccaaaacacttcacagacaaatctgtaataatgtttgaccaaatatctgggcacccagtcaagtagatacataaaattaatcattgcaC-TG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57362301 442 + 70235451 catgattgtggaggctgcaaagtcccaatatctgcattcggcatgctggagacccatcggagctgatgatcatgcaattccagtctaagtccaaagttctgagaaccagggaagtccatggtgaacattcgagtccaaaagctggcagggcaaaaacccaagagccgacattttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaaccagtcagacagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattattgaggacaatctgtgttattccatctaccaattcaaatattaatctta-cccaaaacccttcacagacacatctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63053699 442 - 75711847 catgattgtggaggctgcaaagtcccaatatctgcattcggcatgctggagacccatcggagctgatgatcatgcaattccagtctaagtccaaagttctgagaaccagggaagtccatggtgaacattcgagtccaaaagctggcagggcaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaaccagtcagacagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatctta-cccaaaacccttcacagacacatctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13612932 442 - 18804593 catgattgtggaggctgcaaagtcccaatatctgcattcggcatgctggagacccatcggagctgatgatcatgcaattccagtctaagtccaaagttctgagaaccagggaagtccatggtgaacattcgagtccaaaagctggcagggcaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaaccagtcagacagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatctta-cccaaaacccttcacagacacacctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13223353 443 + 18905526 cgtgattgtggaggctgcaaagtcccaatatctgcattcggcatgctggagacccatcggagctgatgatcatgcaattccagtctaagtccaaaggtctgagaaccagggaagtccatggtgaacattcaagtccaaaagctggcagggcaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaaccagtcagacagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttaccccaaaacccttcacagacacatctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60052981 443 - 72318688 catgattgtggaggctgcaaagtcccaatatctgcattcggcatgctggagacccatcagagctgatgatcatgcaattccagtctaagtccaaagttctgagaaccagggaagtccatggtggacattcgagtccaaaagctggcagggcaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaaccagtgagacagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttaccccaaaacccttcacagacacatctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 386606 443 - 1517660 cgtgattgtggaggctgcaaagtcccaatatctgcattcggcatgctggagacccatcggagctgatgatcatgcaattccagtctaagtccaaagttctgagaaccagggaagtccatggtgaacattcgagtccaaaagctggcagggcaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaaccagtcagacagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttacccccaaacccttcacagacacatctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3486838 443 + 6513552 cgtgattgtggaggctgcgaagtcccaatatctgcattcggcacactggagacccatcggagctgatgatcatgcaattccagtctaagtccaaagttctgagaaccagggaagtccatggtggacattcgaatccaaaagctggcagggcaaaaacccaagagccgatgttttagttcatgtcccaaagcaggaaaagatcaaagtcccagctcaaagcagtcaggcagtggcagttcctgcttactcagattttttgttctgttcaggccttcaactgattggatgagggccattcatattatggaggacaatctgtgttattccatctaccaattcaaatattaatcttaccccaaaacccttcacagacacatctgtaataatgtttgaccaaatatctgggcacccagtcaagcag----ataaaattaatcattgcaCATG i colAng1.NW_012115433v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251204 1 + 117903854 I e dasNov3.JH575754 472280 39 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3590806 156 - 14941987 I e cebCap1.NW_016107689v1 1638833 263 + 2203405 I e saiBol1.JH378121 19443614 0 - 31320352 C a score=2912985.000000 s hg38.chr18_GL383571v1_alt 124387 488 + 198278 CCTTGTTTTTATACATGCTGCTGCTGTACTTATTCATTTGGTTCATATTTgactatgtcttttcccttattagaaaccttaaatcatttgccttt-tatgtagactaaaaaccaaactccacaatttggcagaagta------cagcaatttggtcctaatctcccatcaccccacacatgtaccctacactcaagctatattgctcagtgcttttcctcaaaagaataagattttttcctttgtctttttttctgt----------aacatagctttctgagtactaaaggctattcctcactttttctactagaaaataacttattcatttttttgatctagttccaaataaatgatttttcttttaagaaatctcagattatccacttaaatccatctctccattgtggtccca----tagcttttgttcacattgcctttataagatactatattatgttatactgtattatcA-----------AGCATATAATTTCATTTCTTGAATT---ATCCTC--- s panTro5.chr18 65034406 488 + 78221452 CCTTGTTTTTATACATGCTGCTGCTGTACTTATTCATTTGGTTCATATTTgactatgtcttttcccttattagaaaccttaaatcatttgccttt-tatgtagactaaaaaccaaactccacaatttggcagaagta------cagcaatttggtcctaatctcccatcaccccgcacatgtaccctacactcaagctatattgctcagtgcttttcctcaaaagaataagattttttcctttgtctttttttctgt----------aacatagctttctgagtactaaaggctattcctcactttttctactagaaaataacttattcatttttttgatctagttccaaataaatgatttttcttttaagaaatctcagattatccacttaaatccatctctccattgtggtccca----tagcttttgttcacattgcctttataagatactatattatgttatactgtattatcA-----------AGCATATAATTTCATTTCTTGAATT---ATCCTC--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64153507 488 + 77229886 CCTTGTTTTTATACATGCTGCTGCTATACTTATTCATTTGGTTCATATTTgactatgtcttttcccttattagaaaccttaaatcatttgccttt-tatgtagactaaaaaccagactccacaatttggcagaagta------caacaatttggtcctaatctcccatcaccctgcacatgtaccctacactcaagctatattgctcagtgcttttcctcaaaagaataagattttttcctttgtctttttttctgt----------aacatagctttctgagtactaaaggctattcctcactttttctactagaaaataacttattcatttttttgatctagttccaaataaataatttttcttttaagaaatctcagattatccacttaaatccatctctccattgtggtccca----tagcttttgttcacattgcctttataagatactatattatgttatactgtattatcA-----------AGCATATAATTTCATTTCTTGAATT---ATCCTC--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373014 487 + 17472758 CCTTGTTTTTATACATGCTGCTGCTGTACTTATTCATTTGGTTCGTATTTgactatgtcttttcccttattagaaaccttaaatcatttgccttt-tatgtagactaaaaaccaaactccacaatttggcagaagta------gggcaatttggtcctaatctcccatcaccccgcacatgtaccctacactcaagctatattgctcagtgcttttcctcaaaagaataagattttttcctttgtctttttttctgt----------aacatagctttctgagtactaaaggctatt-ctcactttttctactagaaaataacttattcattttttggatctagttccaaataaatgatttttcttttaagaaatctcagattatccacttaaatccatctctccattgtggtccca----tagcttttgttcacattgcctttataagatactatattatgttatactgtattatcA-----------AGCATATAATTTCATTTCTTGAATT---ATCCTC--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139413478 492 - 152096393 CCTTGTTTTTATACATGCTGCTGCTGTACTTATTCATTTGATTCATATTTgactatgtcttttcccttattagaaaccttaaatcatttgccttt-tatgtagactaaaaactaaactccacaatttggcagaagta------cagcaatttggtcctaatctcccatcaccctgcacatgtaccctatactcaagctacattgctcagtgcttttcctcaaaagaataagatgttttcctttgtctttttttctgt------aacaaacatagctttctgagtattaaagactattcttcactttttctactagacgataacttattcatttttttgatctagttccaaataaatgatttttcttttaagaaatctcagattagccatttaaatccatctctccattgtggtccca----tagcttttgttcacattgcctttatgagatactatattatgttatactgtattatcA-----------AACATAAAATTTCATTTCTTGAATT---ATCCTC--- i nomLeu3.chr4 C 0 I 1 s rheMac8.chr18 57362743 492 + 70235451 CCTTGTTTTTATACATGCTGCTGCTGTATTTATTCATTTGATTCATATTTGACTATGTCTTTTCCCATATTAGAAACCTTAAATCATTTACCTTT-TATATAGACTAAAAACCAAActccacaatttggcagaagta------cagcaatctggtcctaatctcccatcaacccccacatgtaccctacactcaagctacattgctcagtgcgtttcctcaaaagaataag-ttgttttctttgtctttttttctgt------aacaaacatagttttctgagtattaaagactcttcctcactttttctactaggcaataacttattcatctttttgatctagttccaaataaatgatttttcatttacgaaatctcggattagccatttaaatccatctctccattgtggtccca----tagcTTTTATTCTCATTGCCTTTACGAGATACTATATTATGTTATACTGTGTTATCA----------TAGCAGATAATTTCATTTCTTGAATT---ATCCTC--- i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63054141 492 - 75711847 CCTTGTTTTTATACATGCTGCTGCTGTATTTATTCATTTGATTCATATTTGACTATGTCTTTTCCCATATTAGAAACCTTAAATCATTTACCTTT-TATATAGACTAAAAACCAAACTCcacaatttggcagaagta------cagcaatctggtcctaatctcccatcaacccccacatgtaccctacactcaagctacattgctcagtgcgtttcctcaaaagaataag-ttgttttctttgtctttttttctgt------aacaaacatagttttctgagtattaaagactcttcctcactttttctactaggcaataacttattcatctttttgatctagttccaaatAAATGATTTTTCATTTACGAAATCTCAGATTAGCCATTTAAATCCATCTCTCCATTGTGGTCCCA----TAGCTTTTATTCTCATTGCCTTTACGAGATACTATATTATGTTATACTGTGTTATCA----------TAGCAGATAATTTCATTTCTTGAATT---ATCCTC--- i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13613374 492 - 18804593 CCTTGTTTTTATACATGCTGCTGCTGTATTTATTCATTTGATTCATATTTGACTATGACTTTACCCATATTAGAAACCTTAAATCATTTACCTTT-TATATAGACTAAAAACCAAActccacaatttggcagaagta------cagcaatctggtcctaatctcccatcaacccccacatgtaccctacactcaagctacattgctcagtgtgtttcctcaaaagaataag-ttgttttctttgtctttttttctgt------aacaaacatagttttctgagtattaaagactcttcctcactttttctactaggcaataacttattcatctttttgatctagttccaaataaatgatttttcatttacgaaatctcagattagccatttaaatccatctctccattgtggtccca----tagcTTTTATTCTCATTGCCTTTACGAGATACTATATTATGTTATACTGTGTTATCA----------TAGCAGATAATTTCATTTCTTGAATT---ATCCTC--- i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13223796 492 + 18905526 CCTTGTTTTTATACATGCTGCTGCTGTATTTATTCATTTGATTCATATTTGACTATGTCTTTTCCCATATTAGAAACCTTAAATCATTTACCTTT-TATATAGACTAAAAACCAAATTCcacaatttggcagaacta------cagcaatctggtcctaatctcccatcaacccccacatgtaccctacactcaagctacattgctcagtgcgtttcctcaaaagaataag-ttgttttctttgtctttttttctgt------aacaaacatagttttctgagtattaaagactcttcctcactttttctactaggcaataacttattcatctttttgatctagttccaaataaatgatttttcgtttacgaaatctcagattagccatttaaatccatctctccattgtggtccca----tagcTTTTATTCTCATTGCCTTTACGAGATACTATATTATGTTATACTGTGTTATCA----------TAGCAGATAATTTCATTTCTTGAATT---ATCCTC--- i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60053424 492 - 72318688 CCTTGTTTTTATACATGCTGCTGCTGTATTTATTCATTTGATTCATATTTGACTATGTCTTTTCCCATATTAGAAACCTTAAATCATTTACCTTT-TATATAGACTAAAAACCAAACTCcacaatttggcagaagta------cagcaatctggtcctaatctcccatcaacccccacatgtaccctacactcaagctacattgctcagtgcgtttcttcaaaagaataag-ttgttttctttgtctttttttctgt------aacaaacatagttttctgagtattaaagactcttcctcactttttctactaggcaataacttattcatctttttgatctagttccaaatAAATGATTTTTCTTTTACGAAATCTCAGATTAGCCATTTAAATCCATCTCTCCATTGTGGTCCCA----TAGCTTTTATTCTCATTGCCTTTACGAGATACTATATTATGTTATACTGTGTTATCA----------TAGCAGATAATTTCATTTCTTGAATT---ATCCTC--- i chlSab2.chr18 C 0 I 1 s manLeu1.NW_012106698v1 387049 492 - 1517660 CCTTGTTTTTATACATGCTGCTGCTGTATTTATTCATTTGATTCATATTTgattatgtcttttcccatattagaaaccttaaatcatttaccttt-tatatagactaaaaaccaaattccacaatttggcagaagta------cagcaatctggtcctaatctcccatcaacccccacatgtaccctacactcaagctacattgctcagtgcgtttcctcaaaagaataag-ttgttttctttgtctttttttctgt------aacaaacatagttttctgagtattaaagactcttcctcactttttctactaggcaataacttattcatctttttgatctagttccaaataaatgatttttcgtttacgaaatctcagattagccatttaaatccatctctccattgtggtccca----tagcTTTTATTCTCATTGCCTTTACGAGATACTATATTATGTTATACTGTGTTATCA----------TAGCAGATAATTTCATTTCTTGAATT---ATCCTC--- i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3487281 496 + 6513552 CCTTGTTTTTATACATGCTGCTCCTGTATTTATTCATTTGATTCATATTTGACTATGTCTTTTCCTGTATTAGAAACCTTAAATCATTTGCCTTT-TATGTAGACTAAAAACCAAACTCcacaatttggcagaagta------cagcaatctcgtcctaatctcccatcaacccccacatgtaccctacactcaaactacattgctcagtgcgtttcctcgaaagaatacg-tttttttctttgtctttctttctgt------aacaaacatagttttctgagtattaaagactcttccttactttttctactaggcaataacttattcatctttttgatctagttccaaatAAATGATTTTTCTTTTACGAAATCTCAGATTAGCCATTTAAATCCATCTCTCCATTGTGGTCCCATAGCTAGCTTTTATTCTCATTGCCTTTAGGAGATACTATGTTATGTTATACTGTGTTATCA----------TAGCATATAATTTCATTTCTTGACTT---ATCCTC--- i colAng1.NW_012115433v1 C 0 I 1 s dasNov3.JH575754 472319 474 - 2150887 CCTTGTTCTGATATATGCTGCTGCTACACTTAGTCATCTGAATCATATTTAACCATGTCATTACTTGGATTCAAAATCTTAAGGTATTCCTATCTGCATGTAGTATGAAAACTAAACTTCA-AATATGGTAGTATCAGCTAATCAGGCCCTTTGCCCTAATCTCCCATCACCCCACACATGTACCCTACACCTGAGCTACATCTTTAAATAA---TCTTCAAAAGAATAAG-CTGCTGCTTTAATCTTTTTTTTTTTTCTTTGAACAAGCACCATTTTCTGTGCTTGAAAGAATCTACCCCACTTTATCTAACAGGCAATGTCTTATTCCTCCTTTAGATCTAGATCTGACTTTATG----TTACTTTGTGAAATCTTTCATTAGCTAAT--------------------------A----CAGCCATTA-------------TAAGAGATACTATATTACAGTGTGATGTATTATTATATATTAACATGGCATGTAATTAAATTTCTTAAAGTTAAATTTTCTGA i dasNov3.JH575754 I 39 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251204 1 + 117903854 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3590806 156 - 14941987 I e cebCap1.NW_016107689v1 1638833 263 + 2203405 I e saiBol1.JH378121 19443614 0 - 31320352 C a score=9555.000000 s hg38.chr18_GL383571v1_alt 124875 1 + 198278 A s panTro5.chr18 65034894 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64153995 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373501 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139413971 1 - 152096393 A i nomLeu3.chr4 I 1 C 0 s rheMac8.chr18 57363236 1 + 70235451 A i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63054634 1 - 75711847 A i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13613867 1 - 18804593 A i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13224289 1 + 18905526 A i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60053917 1 - 72318688 A i chlSab2.chr18 I 1 C 0 s manLeu1.NW_012106698v1 387542 1 - 1517660 A i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3487778 1 + 6513552 A i colAng1.NW_012115433v1 I 1 C 0 s saiBol1.JH378121 19443614 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3590962 1 - 14941987 A i aotNan1.NW_018502140v1 I 156 C 0 s dasNov3.JH575754 472793 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251204 1 + 117903854 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e cebCap1.NW_016107689v1 1638833 263 + 2203405 I a score=9090.000000 s hg38.chr18_GL383571v1_alt 124876 1 + 198278 T s panTro5.chr18 65034895 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64153996 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373502 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139413972 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57363237 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63054635 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13613868 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13224290 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60053918 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 387543 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3487779 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251205 1 + 117903854 T i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19443615 1 - 31320352 C i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3590963 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 472794 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e cebCap1.NW_016107689v1 1638833 263 + 2203405 I a score=783012.000000 s hg38.chr18_GL383571v1_alt 124877 77 + 198278 TGAAATATTTCAA-----CGAGAACCATAGAACATTCACCTTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT s panTro5.chr18 65034896 77 + 78221452 TGAAATATTTCAA-----CGAGAACCATAGAACATTCACCTTTCTTTATTCAATGCACCTCATCGTGTCTTGAAAATAGTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64153997 77 + 77229886 TGAAATATTTCAA-----CGAGAACCATAGAACATTCACCTTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373503 77 + 17472758 TGAAATATTTCAA-----CAAGAACCATAGAACATTCACCTTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139413973 77 - 152096393 TGAAATATTTCAA-----CTAGAACCATAGAACATTCACCTTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57363238 77 + 70235451 TGAAGTATTTCTA-----TTAGAACCACAGAACATTCACCCTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63054636 77 - 75711847 TGAAGTATTTCTA-----TTAGAACCACAGAACATTCACCCTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13613869 77 - 18804593 TGAAGTATTTCTA-----TTAGAACCACAGAACATTCACCCTTCTTTATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13224291 77 + 18905526 TGAAGTATTTCTA-----TTAGAACCACAGAACATTCACCCTTCTTCATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60053919 77 - 72318688 TGAAGTATTTCTA-----TTAGAACCACAGAACATTCACCCTTCTTCATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 387544 77 - 1517660 TGAAGTATTTCTA-----TTAGAACCACAGAACATTCACCCTTCTTCATTCAATGCATCTCATCGTGTCTTGAAAATAGTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3487780 77 + 6513552 TGAAATATTTCTA-----TTAGAACCATAGAACATTCACCCTTCTTCATTCAGTGCATCTCGTCGTGTCTTGAAAATAGTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251206 77 + 117903854 TGAAATATTTCAA-----CGTGAACCATATAGCATTCACCTTTCTTTATTCAATGCATCTCATTGTGTCTTGAAAATAGTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19443616 76 - 31320352 TGAAATATTTCAA-----TGCAAACCATATAGCATTCACCTTTCTTTATTCAACGCACTTCATTGTGTCTTGAAAATA-TAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1639096 75 + 2203405 TGAAATATTTCAA-----CGCGAACCATATAGCATTCACCTTTCTTTATTCAATTCATCTCAT--TGTCTTGAAAATAGTAT i cebCap1.NW_016107689v1 I 263 C 0 s aotNan1.NW_018502140v1 3590964 77 - 14941987 TGAAATATTTCAA-----CATGAACCATATAGCATTCACCTTTCTTTATTCAATGCATCTCATTGTGTCTTGAAAATAGTAA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 472795 82 - 2150887 AGAAATGTTTCAAGATGTCTGAAGTCATAGAGCATTCACCTTTTATTCTCCAGAGCATTTCACTGGTTCTTGAAAATATTAT i dasNov3.JH575754 C 0 I 1939 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=175046.000000 s hg38.chr18_GL383571v1_alt 124954 19 + 198278 GCCCAG-AAAAAATCTCAAG s panTro5.chr18 65034973 19 + 78221452 GCCCAG-AAAAAATCTCAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64154074 19 + 77229886 GCCCAG-AAAAAATCTCAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373580 19 + 17472758 GCCCAG-AAAAAATCTCAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139414050 19 - 152096393 GCCCAG-AAAAAATCTCAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57363315 19 + 70235451 ACCCAG-AAAAAAAATCAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63054713 19 - 75711847 ACCCAG-AAAAAATATCAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13613946 19 - 18804593 ACCCAG-AAAAAATATCAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13224368 19 + 18905526 ACCCAG-AAAAAATATCAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60053996 20 - 72318688 ACCCAGAAAAAAATATCAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 387621 19 - 1517660 ACCCAG-Aaaaaatatcaag i manLeu1.NW_012106698v1 C 0 I 6919 s colAng1.NW_012115433v1 3487857 19 + 6513552 ACCCAG-AAAAAATATCAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251283 19 + 117903854 GCCCAG-AGAAAATATCAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19443692 19 - 31320352 GCCCAG-AGAAAATATCAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1639171 19 + 2203405 GCCCAG-AGAAAATATCAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3591041 19 - 14941987 GCCCAG-AGAAAATAGCAAG i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=916353.000000 s hg38.chr18_GL383571v1_alt 124973 95 + 198278 AACAAAGGAGAAATAAAGACTTTATGAGAAAAATACACCTTAAGAAAACTCATTTCAAACCTATCTACAGTATGGACATGATAATGGaggaaata s panTro5.chr18 65034992 95 + 78221452 AACAAAGGAGAAATAAAGACTTTATGAGAAAAATACACCTTAAGAAAACTCATTTCAAACCTATCTACAGTATGGACATGATAATGGaggaaata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64154093 95 + 77229886 AACAAAGGAGAAATAAAGACTTTATGAGAAAAATACACCTTAAGAAAACTCATTTCAAACCTATCTACAGTATGGACATGATAATGGaggaaata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373599 95 + 17472758 AACAAAGGAGAAATAAAGACTTTATGAGAAAAATACACCTTAGGAAAACTCATTTCAAACCTATCTACAGTATGGACATGATAATGGaggaaata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139414069 95 - 152096393 AACAAAGGAGAAATAAAGACTTTATGAGAAAAATACACCTTAAGAAAACTCATTTCAAACCTATCTACAGTATAGACATGATAATGGaggaaata i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57363334 95 + 70235451 AACAAAGGAGAAATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACACGATAATGGaggaaata i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63054732 95 - 75711847 AACAAAGGAGAAATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACACGATAATGGaggaaata i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13613965 95 - 18804593 AACAAAGGAGAAATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACACGATAATGGaggaaata i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13224387 95 + 18905526 AACAAAGGAGAAATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACACGATAATGGaggaaata i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60054016 95 - 72318688 AACAAAGGAGAAATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACACGATAATGGagcaaata i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 394559 95 - 1517660 aacaaaGGAGATATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACACGATAATGGAGGAAATA i manLeu1.NW_012106698v1 I 6919 M 760 s colAng1.NW_012115433v1 3487876 95 + 6513552 AACAAAGGAGAAATAAAGATTTTATGAGAAAAATACACCTTAAGAAAAATCATTTCAAACCTATCTATAGTACACACATGATAATGGagtaaata i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251302 94 + 117903854 AACAAAGGAAAAATAAAGACTTTATCAGAAAAATACA-CTTAAAAGAAATCATTTCAAACCTATCTATAGTACaggcatgataatggcgggaata i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19443711 95 - 31320352 AACAAAGGAAAAATAAAGACTTTATCAGAAAAATACACCTTAAAAGAAATCACTTCAAACCTATCTATAGTACACTCATGATAATGGagggaata i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1639190 95 + 2203405 AACAAAGGAAAAATAAAGACTTTATCTGAAAAATACACCTTAAAAGAAATAATTTCAAACCTATCTATAGTACAGGCATCATAATGGagggaata i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3591060 93 - 14941987 AACAAAGGAAAAAT--AGACTTTATCAGAAAAATACACTTTAAAAGAAATCATTTCAAACCTATCTATAGTACAGGCATGATAATGGagggaata i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=1316168.000000 s hg38.chr18_GL383571v1_alt 125068 166 + 198278 aaatttataatgtttggaaggaaagaagcacatttcactattcacagatgatataattagttatgtagaaatttccacaaaatccacaaaaaggtgttataactaataattgagtatagcaaaatcacatgatacaaagctactacaaatattcaactccattttt s panTro5.chr18 65035087 166 + 78221452 aaatttatgatgtttggaaggaaagaagcacatttcactattcacagatgatataattagttatgtagaaatttccacaaaatccacaaaaaggtgttataactaataattgagtatagcaaaatcacatgatacaaagctactacaaatattcaactccattttt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64154188 166 + 77229886 aaatttataatgtttggaaggaaagaagcacatttcactattcacagatgatataattagttatgtagaaatttccacaaaatccacaaaaaggtgttataactaataattgagtatagcaaaatcacatgatacaaagctactacaaatattcaactccattttt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373694 166 + 17472758 aaatttataatgtttggaaagaaagaagcacatttcactattcacagatgatataattagttatgtagaaatttccacaaaatccacaaaaaggtgttataactaataattgagtatagcaaaatcacatgatacaaagctactacaaatattcaactcaattttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139414164 162 - 152096393 aaatttataatgtttggaaggaaagaagcacatttcactattcacagatgatataattagttatgtagaaatttccacaaaatccacaaaaaggtagta----taataattgagtttagcaaaatcacatgatacaaagctactacaaatattcaactccattttt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57363429 165 + 70235451 aaatttatagtgtttggaaggaaagaagtgcatttcactattcacaggtgacataattagctatgtagaaatttccacaaaatccacaaaaaggcactgtaactaa-aattgattttagcaaaatcacatgatacaaggctactacaaatattcaactccattttt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63054827 165 - 75711847 aaatttatagtgtttggaaggaaagaagtgcatttcactattcacaggtgacataattagctatgtagaaatttccacaaaatccacaaaaaggcactgtaactaa-aattgattttagcaaaatcacatgatacaaggctactacaaatattcaactccattttt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13614060 165 - 18804593 aaatttatagtgtttggaaggaaagaagtgcatttcactattcacaggtgacataattagctatgtagaaatttccacaaaatccacaaaaaggcactgtaactaa-aattgattttagcaaaatcacatgatacaaggctactacaaatattcaactccattttt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13224482 166 + 18905526 aaatttatagtgtttggagggaaagaagtgcatttcactattcaccggtgacataattagctatgtagaaatttccacaaaatccacaaaaaggcactgtaactaataattgattttagcaaaatcacatgatacaaggctactacaaatattcaactccattttt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60054111 166 - 72318688 aaatttatagggtttggaaggaaagaagtgcatttcactattcacaggtgacataattagctatgtagaaatttccacaaaatccacaaaaaggcactgtaactaataattgattttagcaaaatcgcatgatacaaggctactacaaatattgaactccattttt i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3487971 166 + 6513552 aaatttataatgtttggaaggaaagaagtgcatttcactattcacaggtgacataattagctatgtagaaatttccacaaaatccacaaaaaggcactgtaactaataattgattttagcaaaatcacatgatacaaggctactacaaatattcaactccattttt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105251396 162 + 117903854 aaatttataatgtttggaaagaaagaagtaaattttactattcacagatgacataattagctatgtagaaatttccacaaaatccac--aaagccattaaaactaacaattgagtttagcaaaatcacatgacac--agttaatacaaataattgactccattttt i calJac3.chr13 C 0 I 6518 s saiBol1.JH378121 19443806 156 - 31320352 aaattt---atgtttggaaagaaagaagaaaatttcactattcacagatgac--aattagctatgtagaaatttccacaaaatccac--aaagccattataactaataactgagtttagcaaaatcacatga-ac--agttaatagaaatatttaactccattttt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1639285 158 + 2203405 aaatttataatgtttg----gaaagaagaaaatttcactattcacagatgac--aattagctatgtagaaatttccacaaaatccac--aaagccattataactaataattgagtttagcaaaatcacatgacacaaagttaatagaaatatttaactccattttt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3591153 164 - 14941987 aaattcataatgtttggaaagaaagaagtaaatttcactattcacagatgacataattagctatgtagaaatttccacaaaatccac--aaagccattataactaataattgagtttagcaaaatcacatgacacaaagttaatacaaatatttagctcaattttt i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=219235.000000 s hg38.chr18_GL383571v1_alt 125234 34 + 198278 acataacagcaaagccgattaaaaatttgtatta s panTro5.chr18 65035253 34 + 78221452 acataacagcaaagccaattaaaaatttgtatta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64154354 34 + 77229886 acataacagcaaagccgattaaaaatttgtatta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373860 34 + 17472758 acataacagcaaagccgattaaaaatttgtatta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139414326 34 - 152096393 acataacagcaaagccgattaaaaatttgtatta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57363594 34 + 70235451 acataacagcaaagctgattaaaaatttatatta i rheMac8.chr18 C 0 I 2163 s macFas5.chr18 63054992 34 - 75711847 acataacagcaaagctgattaaaaatttatatta i macFas5.chr18 C 0 I 2164 s macNem1.NW_012016688v1 13614225 34 - 18804593 acataacagcaaagccgattaaaaatttatatta i macNem1.NW_012016688v1 C 0 I 2149 s cerAty1.NW_012001075v1 13224648 34 + 18905526 acatgacagcaaagccgattaaaaatttatatta i cerAty1.NW_012001075v1 C 0 I 3192 s chlSab2.chr18 60054277 34 - 72318688 acataacagcaaagctgattaaaagtttatatta i chlSab2.chr18 C 0 I 2171 s colAng1.NW_012115433v1 3488137 34 + 6513552 acgtaacagcaaagccaattaaaaatttatatta i colAng1.NW_012115433v1 C 0 I 2179 s saiBol1.JH378121 19443962 28 - 31320352 atataacagcaaagccaattaaaaatta------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1639443 28 + 2203405 atataacagcaaagccaattaaaaatta------ i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3591317 28 - 14941987 atataacagcaaagccaattaaaaatta------ i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=2751210.000000 s hg38.chr18_GL383571v1_alt 125268 1335 + 198278 aaagtaccatttacaatatcaaaactcattaagttattaagtataaatct-aaaaatatgtacagggtcagaatgctaaaaattataaaacactgatgaaagagatcagagaacacctaagtaaatggagttatttccatttataatggaatgttattatgtcatttctccctaaattgatctgaaaatatgatgcaattttaactaaatcacaacaggaa-ttttttg-gagaaattcacatgaaatttaaaattcatttggaaaggcaaagaaactaaaaaaaatttgaaaaagtaaaaatttgaaggattaaaatgatataattttaatactaactctaaagctacaataatcaagacagtgttgcatcaatgaaagcagaaatataaatcaatataacagaatacagagtgcagaaataagcccatatgcttatggtgaatcatttttgacaaagtgcaaagttaattcaatggagaaaaaataatccctaacacacagtattggaatatgagacactcacacacacacatacacacaca------cacacacacacacacacacacacacatataacatatatatacatatacacatatacataacatatatatacatatacacatgtacctcaatccaaacctcatatcctgtacaaaacttaacacaaaatagaacatacacctaaaagtaaaaccttaaaaagaaaaaaaaa-atagaaaaattatatattatctaaactaagaacctctactcttttaaagacataagagaatagaaagtaaagccatagcttggaacacagtattttcaaaacacacatttgaacacagaattataaccataatacttaaagaactatcaaaactgtaagaaatcaactaaataaacaacagcaaaatatttcaaaca---tctgccaaagaagatacataaacagc-aaatcacacatgaatctatgctc--gatcattagttattagagaaatgtaaatacaatcctcaataagattccattatacaggtattagaatggcaatactaaaattaaaaataaaactggcaatactaagtgttgaca-ggatacagagcaactgagatgctcatacattggtagcgagaaaacaaaactgtacatttcctttgaaaaatattttcacaa-ttattaaacatatatttatcaactgatcaagaagtctcagtcccaggtatttatacaagaaaaatgaactttcttattcacagaaagttttgtggatgaaggttgatagcttttctattcacaatcactaaacccaaaaacaactcaaatgtcctacaaccagtaaaatg-tggttcttccata s panTro5.chr18 65035287 1320 + 78221452 aaagtaccatttacaatatcaaaactcattaagttattaagtataaatct-aaaaatatgtacagggtcagaatgctaaaaattataaaacactgatgaaagatatcagagaacacctaagtaaatggagttatttccatttataatggaatgttattatgtcatttctccccaaattgatctgaaaatatgatgcaattttaactaaatcacaacaggac-ttttttg-gagaaattcacatgaaatttaaaattcatttggaaaggcaaagaaactaaaaaaatttcaaaaaagtaaaaatttgaaggattaaaacgatataattttaatactaactctaaagctacaataatcaagacagtgttgcatcaatgaaagcagaaatgtaaatcaatataacagaatacagagtgcagaaataagcccatatggttatggtgaatcatttttgacaaagtgcaaagttaattcaatggagaaaaaataatccctaacacacagtattggaatatgagacactcacacacacacatacacacaca------cacacacatata--------------tataacatatatatacatatacacatatacataacatatatatacatatacacatgtacctcaatccaaacctcatatcctgtacaaaacttaacacaaaatagaacatacacctaaatgtaaaaccttaaaaagaaaaaaaaa--tagaaaaattatatattatctaaactaagaacctctactcttttaaagacataagagaatagaaagtaaagccatagcttggaacacaatattttcaaaacgcacatttgaacacagaattataaccagaatacttaaagaactatcaaaactgtaagaaatcaactaaa----caacaacaaaatatttcaaacaatatctgccaaagaagatacataaacagc-aaatcacacatgaatctatgctc--gatcattagttattagagaaatgtaaatacaatcctcaataagattccattatacaggtattagaatggcaatactaaaattaaaaataaaactggcaatactaagtgttgacaaggatacagagcaactgagatgctcatacattggtagcgagaaaacaaaactgcacatttcctttgaaaaatattttcacaa-ttattaaacatatatttatcatatgatcaagaaatctcagtctcaggtatttatacaagaaaaatgaactttcttattcacagaaagttctgtggatgaaggttgatagcttttctattcacaatcactaaacccaaaaacaatccaaatgtcctacaaccagtaaaatg-tggttcttccata i panTro5.chr18 C 0 C 0 s panPan2.chr18 64154388 1329 + 77229886 aaagtaccatttacaatatcaaaactcattaagttattaagtataaatct-aaaaatatgtacagggtcagaatgctaaaaattataaaacactgatgaaagatatcagagaacacctaagtaaatggagttatttccatttatgatggaatgttattatgtcatttctccctaaattgatctgaaaatatgatgcaattttaactaaatcacaacaggac-ttttttg-gagaaattcacatgaaatttaaaattcatttggaaaggcaaagaaactaaaaaaatttcaaaaaagtaaaaatttgaaggattaaaacgatataattttaatactaactctaaagctacaataatcaagacagtgttgcatcaatgaaagcagaaatgtaaatcaatataacagaatacagagtgcagaaataagcccatatgcttatggtgaatcatttttgacaaagtgcaaagttaattcaatggagaaaaaataatccctaacacacagtattggaatatgagacactcacacacacacatacacacaca------cacacacacaca--------catatatataacatatatatacatatacacatatacataacatatatatacatatacacatgtacctcaatccaaacctcatatcctgtacaaaacttaacacaaaatagaacatacacctaaatgtaaaaccttaaaaagaaaaaaaa---tagaaaaattatatattatctaaactaagaacctctactcttttaaagacataagggaatagaaagtaaagccatagcttggaacacaatattttcaaaacacacatttgaacacagaattataaccataatacttaaagaactatcaaaactgtaagaaatcaactaaataaacaacagcaaaatatttcaaacaatatctgccaaagaagatacataaacagc-aaatcacacatgaatctatgctc--gatcattagttattagagaaatgtaaatacaatcctcaataagattccattatacaggtattagaatggcaatactaaaattaaaaataaaactggcaatactaagtgttgacaaggatacagagcaactgagatgctcatacattggtagcgagaaaacaaaactgcacatttcctttgaaaaatattttcacaa-ttattaaacatatatttatcatatgatcaagaaatctcagtcccaggtatttatacaagaaaaatgaactttcttattcacagaaagttctgtggatgaaggttgatagcttttctattcacaatcactaaacccaaaaacaatccaaatgtcctacaaccagtaaaatg-tggttcttccata i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5373894 1340 + 17472758 aaagtaccatttacaatatcaaaactcattaagttattaagtataaatct-aaaaatatgtacagggtcagaatgctaaaacttataaaacactgatgaaagatatcagagaacacctaagtaaatggagttatttccatttataatggaatgttattatgtcatttctccctaaattgatctgaaaatatgatgcaattttaactaaatcacaacaggac-ttttttg-gagaaattcacgtgaaatttaaaattcatttggaaaggcaaagaaactaaaaaaatttcaaaaaagtaaaaatttgaaggattaaaacgatacaattttaatactaactctaaagctacaataatcaagacagtgttgcatcaatgaaagcagaaatacaaatcaatataacagaatacagagtgcagaaataagcccatatgcttatggtgaatcatttttgacaaagtgcaaagttaattcaatggagaaaaaataatccctaacacacagtattggaatatgagacacacacaccaacacacacacacacaccacaccacacacacaca----cacacatatatataacatatatatacatatacacatatacataacatatatatacatatacacatgtacctcaatccaaacctcatatcctgtacaaaacttaacacaaaatagaacatacacctaaatgtaaaaccttaaaaagaaaaaaaaa--tagaaaaattatatattatctaaactaagaacctctactcttttaaagacataagagaatagaaagtaaagccatagcttggaacacaatattttcaaaacacacatttgaacacagaattataaccataatacttaaagaactatcaaaactgtaagaaatcaactaaataaacaacagcaaaatatttcaaacaacatctgccaaagaagatacataaacagc-aaatcacacatgaatctatgctc--gatcattagttattagagaaatgtaaatacaatcctcaataagattccattatacaggtattagaatggcaatactaaaattaaaaataaaactggcaatactgagtgttgacaaggatacagagcaactgagatgctcatacattggtagtgagaaaacaaaactgcacatttcctttgaaaaatattttcacaa-ttattaaacatatatttatcatatgatcaagaaatctcagtcccaggtatttatacaagaaaaatgaactttcttattcacagaaagttctgtggatgaaggttgatagcttttctattcacaatcactaaacccaaaaacaatccaaatgtcctacaaccagtaaaatg-tggttcttccata i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139414360 1329 - 152096393 aaagtaccatttacaatatcaaaactcattaagttattaagtataaatct-aaaaatatgtacagggtcagaatgctaaaaattataaaacactaatgaaagatatcagacaacacctaagtaaatggagtt-tttccatttatagtggaatgttattatgtcatttctcccttaattgatctgaaaatatgatgcaattttaactaaatcacaacaggcc-ttttttg-gagaaattcacatgaaatttaaaattcatttggaaaggcaaagaaactaaaaaaatttcgaaaaagtaaaaatttgacggattaaaacgatataattttaatactaactctaaagctacaataatcaagacagtgttgcatcaatgaaagcagaaatataaatcaatataacagaatagagtgtgcagaaataagcccatatgcttatggtgaatcatttttgacaaactgcaaagttaattcaatggagaaaaaataatccccaacacacagtattgaaatatgagacactcacacacacacaaacacacaca------cacacacacaca----------catatataacatatatatacatatacacatatacataacatatatatacatatacacatgtacctcaacctaaacctcatatcatgtacaaaacttaacacaaaatagaacatagacctaaatgtaaaaccttaaaaagaaaaaaataaatagagaaattatatattatctaaactaacaacctctactcttttaaagacataagagaatagaaagtaaagccatagtgtggaacacaatattttcaaaacacacatttgaacacagaattataaccataatacttaaagaactatcaaaactttaagaaatcaagtaaataaacaacagcaaaatatttcaaacaacatctgccaaagaagaaacataaacagc-aaatcacacatgaatctatgctt--gatcactagttatcagagaaatgcaaatacaatcctcaataagattccattatacaggtattagaatggcaatactaaaattaaaaataaaattggcaatactaagtgttgacaaggatacagagcaactgaaatgctcatacattggtagcgggaaaacaaaactgtacatttcctttgaaaaatattttcacaa-ttattaaacatctatttatcatatgatcaagaaatctcagtcccaggtatttatacaagaaaaatgaactttcttattcacagaaagttctgtggatgaaggtttatagcttttctattcacaatcactaaacccaaaaacaatccaaatgtcctacaaccagtaaaatg-tggttcttccata i nomLeu3.chr4 C 0 C 0 s saiBol1.JH378121 19443990 1269 - 31320352 aaagtaacatttgcaatatcaaaaataattaatttattaagcataaatctaaaaaatatgtac--agtcagaatgctgaaaattct--aacagtaatgaaagaaatcagagaacatctaagtaaatggagttattttcatttataatgaaatgttattatgttatttctccctaaactgatctgaaaatatgatgcaatttcaactaaagcacaacaggac-ttttttgggagaaattcacatgaaatttaaaatttatttggaaaggcaaataaactaaaacaattttgaaaaagtataaacttgaaggattaactcttcataattttaatacttactctaaagctataataatcaagacagtgttggataagtgaaagtagcaatataaatcaatataacagaatacagagtgcagaaataagctcatatgcatatggcgaatcatttttgacaaagtacaaagttaattcaatggagaaaaagttatctccaacacacagtattggaatatgagacactcacatatttatttatacacaca------cacacacacaca-------------------cacatatatatacacacac-------------------acacatacacgtatacctcaacccaaacctcatatcatgtatgtaacctaacacaaaatagaacatatacttaaatgtaaaC--------------TTAaa--taaataaaatgtatattatctaaactaagagcttctcctcttttgaagataaaagagtataaaaagtaaagccacagactggg--acaatattttcaaaatgcatatttgaacacagaattatatccatgatacttaaagaactaacaaaaccttaagacatcaactaaataaaaaacagcaaaatatttcaaaca---tttgccaaagaagatacataaatggc-aa---aaaaatgaatatatactcaagatcattagttattagagaaatgcaaacatgatcctcagtaagattccactatacagatattagaatggcaaaactaaaattaaaaataaaattggcaatacttagtgttgacaattatacaga-----------gttcatacattggtagtgtgaaaacaaaactatacatttgctttgaaaaatattctgaaattttattaaacatatatttacagtacaattaagaaatcttagtctcagctatttatacaggaaaaataaactttcttattcacagaaagttctgtggatgaaggtttatatcttttctattcacattcaccaaacccaaaaataatcaaaatgtcctataaccagtaaaatgctagttcttccata i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1639471 1252 + 2203405 aaagtaccatttataatatcaaaaataattaatctattaagcataaatctaaaaaatatgtacagagtcagaatgctgaaaattat--aacactaatgaaagatatcagagaacatctaagtaaatggagttatttccatttataatgaaatgttattatgctatttctccctaaattgatctgaaaatatgatgcaatttcaactaaatcacaacaggactttttttgtgagaaattcacatgaaatttaaaatttatttggaaaggctaagaaact---acaattttgaaaaagtagaaacttgaaggattaactcttcataatttcaatactaactctaaagctataataatcaagacagtgttggataagtgaaagcagcaatataaatcaatataacagaatagagagtgcagaaataagctcatatgcatatggcgaatcatttttgacaaagtgcaaagttaattcaatggagaaaaagctatctccaacacacagtattggaatatgagacactcacatatttatttatttataca------cac---------------------------------------acacacac-------------------acacacacacgtatacctcaacccaaacctcacatcatgtatgtaacctaacacaaagtagaacatatacttaaatgtaaaC-TT--------AAATTAaa--taaataaattgcatattatctaaactaagagcatctccttttataaaggcataagagaataaaaagtaaagccatagactggaacacaatattttcaaaatgcatatttgaacacagaattatatccatgatacttaaagaacaaacaaaactttaagacatcaactaaac----aacagcaaaatacttcaaaca---tttgccaaagaagatacacaaatggc-aa---aaaaatgaatatatgctcaagatcattagttattagagaaatgcaaacatgatcctcagtaagattccactatacagatattagaatggcaaaactaaaattaaaaataatattggcaatactaagtgttgacaattatacaca-----------gttcatacattggtagtgggaaaacaaaaccatacatttgctttaaaaaatattctgaaaatttattaaacatatatttacagtacaatcaagaaatctcagtcccaggtattcatacaggaaaaataaactttcttgtccacagaaagttctgtagatgaaggtttatatcttttctattcacattcaccaaacccaaaaataatcaaaatgtcctacaaccagtagaatgctagttcttccata i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3591345 1272 - 14941987 aaagtaccatttacaatatcaaaaataattaatttattaagcataaatctaaaaaatatgtacagagtcagaatgctgaaaattat--aacactaatgaaagatatcagagaacatctaagtaaatggagttatttccatttataatgaaatgttattatattatttctccctaaattgatctgaaaatatgatgcaatttcaactaaatcacaacaggac-ttttttgggagaaattcacatgaaatttaaaatttatttggaaaggcaaagaaactaaaacaattttgaaaaagtataaacttgaaggattaactcttcataatttcaatactaattctaaagctataataatcaagacagtgttggataagtgaaagcagcaatataaatcaatataacagaatagacagtgcagaaataagctcatatgcatatggcgagtcatttttgacaaagtgcaaagttaatgcaatggagaaaaaattatctccaacacacagtattggaATACGAGACACTCACatatttatttatttatata------tac--acacaca-------------------cacatatatatatatacac-------------------acacatacacatataCCTCAACCCAAACCTCATATCATGTATGTGACCTAACACAAAATAGAACATATACTTAAATGTAAAcctt--------aaaataaa--taaataaattgtatattatctaaattaagagcttctcctcttttaaagacataagagaataaaaaggaaagccataaactggaacacaatattttcaaaatgtatatttgaagacagaattatatccatgatacttaaag----aacaaaactgtaagaaatcaactaaataaacaacagcaaaatatttcaaaca---tttgccaaagaagatacgtaaatggcaaa---aaaaatgaatatatgctcaagatcattagttattagagaaatgcaaacatgatcctcagtaagattccactatacagatactagaatggcaaaactaaaattaaaaataaaattggcaatactaagtgtcgacaattatacaga-----------gttcatacattggtagtgggaaaacaaaactatacatttgctttgaaaaatattctgaaaatttattaaacatatatttacagtacaatcaagaaatctcagtcccaggtatttataaaggaaaaat-aactttcttattcacagaaagttctgt-gatgaaggtttataccttttctattcacattcaccaaacccaaaaataatcaaaatgtcctacaaccagtaaaatgctagttcttccata i aotNan1.NW_018502140v1 C 0 I 583 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e colAng1.NW_012115433v1 3488171 2179 + 6513552 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M e chlSab2.chr18 60054311 2171 - 72318688 I e cerAty1.NW_012001075v1 13224682 3192 + 18905526 I e macNem1.NW_012016688v1 13614259 2149 - 18804593 I e macFas5.chr18 63055026 2164 - 75711847 I e rheMac8.chr18 57363628 2163 + 70235451 I a score=26149.000000 s hg38.chr18_GL383571v1_alt 126603 15 + 198278 ccatggaatattagt s panTro5.chr18 65036607 15 + 78221452 ccatggaatattagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64155717 15 + 77229886 ccatggaatattagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5375234 15 + 17472758 ccatggaatattagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139415689 15 - 152096393 ccatggaatattagt i nomLeu3.chr4 C 0 C 0 s saiBol1.JH378121 19445259 15 - 31320352 cgatggaatactagt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1640723 15 + 2203405 cgatggaatactagt i cebCap1.NW_016107689v1 C 0 I 729 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3592617 583 - 14941987 I e colAng1.NW_012115433v1 3488171 2179 + 6513552 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M e chlSab2.chr18 60054311 2171 - 72318688 I e cerAty1.NW_012001075v1 13224682 3192 + 18905526 I e macNem1.NW_012016688v1 13614259 2149 - 18804593 I e macFas5.chr18 63055026 2164 - 75711847 I e rheMac8.chr18 57363628 2163 + 70235451 I a score=9070.000000 s hg38.chr18_GL383571v1_alt 126618 8 + 198278 gagctgta s panTro5.chr18 65036622 8 + 78221452 gagctgta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64155732 8 + 77229886 gagctgta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5375249 8 + 17472758 gagctgta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139415704 8 - 152096393 gagctgta i nomLeu3.chr4 C 0 C 0 s saiBol1.JH378121 19445274 8 - 31320352 cagttgtg i saiBol1.JH378121 C 0 I 555 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3592617 583 - 14941987 I e cebCap1.NW_016107689v1 1640738 729 + 2203405 I e colAng1.NW_012115433v1 3488171 2179 + 6513552 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M e chlSab2.chr18 60054311 2171 - 72318688 I e cerAty1.NW_012001075v1 13224682 3192 + 18905526 I e macNem1.NW_012016688v1 13614259 2149 - 18804593 I e macFas5.chr18 63055026 2164 - 75711847 I e rheMac8.chr18 57363628 2163 + 70235451 I a score=12012.000000 s hg38.chr18_GL383571v1_alt 126626 2 + 198278 aa s panTro5.chr18 65036630 2 + 78221452 aa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64155740 2 + 77229886 aa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5375257 2 + 17472758 aa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139415712 2 - 152096393 aa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57365791 2 + 70235451 aa i rheMac8.chr18 I 2163 C 0 s macFas5.chr18 63057190 2 - 75711847 aa i macFas5.chr18 I 2164 C 0 s macNem1.NW_012016688v1 13616408 2 - 18804593 aa i macNem1.NW_012016688v1 I 2149 C 0 s cerAty1.NW_012001075v1 13227874 2 + 18905526 aa i cerAty1.NW_012001075v1 I 3192 C 0 s colAng1.NW_012115433v1 3490350 2 + 6513552 aa i colAng1.NW_012115433v1 I 2179 C 0 s saiBol1.JH378121 19445837 2 - 31320352 aa i saiBol1.JH378121 I 555 C 0 s cebCap1.NW_016107689v1 1641467 2 + 2203405 aa i cebCap1.NW_016107689v1 I 729 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3592617 583 - 14941987 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M e chlSab2.chr18 60054311 2171 - 72318688 I a score=12198.000000 s hg38.chr18_GL383571v1_alt 126628 2 + 198278 ag s panTro5.chr18 65036632 2 + 78221452 ag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64155742 2 + 77229886 ag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5375259 2 + 17472758 ag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139415714 2 - 152096393 aC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57365793 2 + 70235451 ag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63057192 2 - 75711847 ag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13616410 2 - 18804593 ag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13227876 2 + 18905526 ag i cerAty1.NW_012001075v1 C 0 C 0 s colAng1.NW_012115433v1 3490352 2 + 6513552 ag i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19445839 2 - 31320352 ag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1641469 2 + 2203405 ag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3593200 2 - 14941987 ag i aotNan1.NW_018502140v1 I 583 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M e chlSab2.chr18 60054311 2171 - 72318688 I a score=4437411.000000 s hg38.chr18_GL383571v1_alt 126630 625 + 198278 acatcagagctcactctactcaggaaatgaagataatactaaagaccagctcatagaacacataaatttagctaagtattttttcttggaacttcacaaatgcatag----tttttgtcttaggtattagttattagttattgctaataatgccagtatttgcttatatgttgttatatgaaaatgatggtgttataaagaaataatttgtgtctacagcttcgttattgtcaaaaactcaactagctctaaattgtataaaactatgaaagcttgtgttttcatcacgaagtctgtatttgtgttttgaattttcaattttttaggactgtgttctgatggcatgattttaatga-aagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcaccagactgcttcactcatcagaaacacttactatgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaactttgatactacataaaaactaatatgtactattcttcctatattattctcattatgttttaatatgcaagttcatcataaacaactcttatggcatgctgaaatgcagtatatattctag s panTro5.chr18 65036634 625 + 78221452 acatcagagctcactctactcaggaaatgaagataatactaaagaccagctcatagaacacataaatttagctaagtattttttcttggaacttcacaaatgcatag----tttttgtcttaggtattagttattagttattgctaataatgccagtatttgcttatatattgttatatgaaaatgatggtgttataaagaaataatttgtggctacagcttcgttattgtcaaaaactcaactagctctaaattgtataaaactatgaaagcttgtgttttcatcacgaagtctgtatttgtgttttgaattttcaattttttaggactatgttctgatggcatgattttaatga-aagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcaccagactgcttcactcatcagaaacacttactatgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaactttgatactacataaaaactaatatgtactattcttcctatattattctcattatgttttaatatgcaagttcatcataaacaactcttatggcatgctgaaatgcagtatatattctag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64155744 625 + 77229886 acatcagagctcactctactcaggaaatggagataatactaaagaccagctcatagaacacatacatttagctaagtattttttcttggaacttcacaaatgcatag----tttttgtcttaggtattagttattagttattgctaataatgccagtatttgcttatatgttgttatatgaaaatgatggtgttataaagaaataatttgtgtctacagcttcgttattgtcaaaaactcaactagctctaaattgtataaaactatgaaagcttgtgttttcatcacgaagtctgtatttgtgttttgaattttcaattttttaggactgtgttctgatggcatgattttaatga-aagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcaccagactgcttcactcatcagaaacacttactatgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaactttgatactacataaaaactaatatgtactattcttccaatattattctcattatgttttaatatgcaagttcatcataaacaactcttatggcatgctgaaatgcagtatatattctag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5375261 624 + 17472758 acatcagagctcactctactcaggaaatgaagataatactaaagaccagctcatagaacacataaatttagctaagtattttttcttggaacttcacaaatgcatag----tttttgtcttaggtattagttattagttattgctaataatgccagtatttgcttatatgttgttatatgaaaatgatggtgttataaagaaataatttgtgtctacagcttcgttattgtcaaaaactcaactagctctaaattgtatacaactatgaaagcttgtgttttcatcacgaagtctgtatttgtgttttgaattttcaattttttaggactgtgttctgatggcatgattttaatga-aagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcaccagactgcttcactcatcagaaacacttactatgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaactttgatactacataaaaactaatatgtactattcttcctatattattctcattatgttttaatatgc-agttcatcataaacaactcttatggcatgctgaaatgaagtatatattctag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139415716 626 - 152096393 ACATCAGAGCTCACTCTACTCAGGAAATGAAGATAATACTAAAGACCAGCTCATAGTACACATAAATTTAGCTAAGTATTTTTTCTTGGAACTTCACAAATGCATAG----TTTTTGTCTAAGGTATTAGTTATTagttattgctaataatgccagtatttgcttatatgttgttatatgaaaatgatggtgttataaagaaataatttgtgtctacagctttgttattgtcaaaaactcgactagctctaaattgtataaaactatgaaagcttgtgttttcatcacaaagtctgtatttgtgttttgaattttcaattttttaggaatatgttctgatggcatgattttaatgacaagaaaacattctggaaatgttacacagataaagaagtttgtatcctatcagattgttaatcaccagactgcttcactcatcaaaaacacttactatgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacactgtaaaactttgatactacataaaaactaatatgtactattcttcctatattattctcattatgttttaatatggaagttcatcataaacaactcttatggcatgctgaaatgcagtatatattctag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57365795 616 + 70235451 acatcagaggtcactctactcaggaaatggagataatactaaagaccagctcatagtacatacacatttagctaagtagtttttcttggaacttcacaaatgc--ag----tttttgtattaggtattagttattagttattgctaataatgccactatttgcttacatgttgttatgtgaaaatga---tgttataaagaaataatttgtgtgtacagcttcattactgtaaaaaatacaactagctctaaattgtataaaactatgaaagtttgtgttttcatcacgaagtctgtatttgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaaagacaagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcac-----tgcttcactcatcagaaacacatactacgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaacttcgatactacataaaaagtaatatgtattattcttcctatattattctcattatgttttaatatggaagttcttcacaaacaactcttatggtatgctgaaatgcagtatatattctag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63057194 616 - 75711847 acatcagagctcactctactcaggaaatggagataatactaaagaccagctcatagtacatacacatttagctaagtagtttttcttggaacttcacaaatgc--ag----tttttgtattaggtattagttattagttattgctaataatgccactatttgcttacatgttgttatgtgaaaatga---tgttataaagaaataatttgtgtgtacagcttcattactgtaaaaaatacaactagctctaaattgtataaaactatgaaagtttgtgttttcatcacgaagtctgtatttgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaaagacaagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcac-----tgcttcactcatcagaaacacatactacgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaacttcgatactacataaaaagtaatatgtattattcttcctatattattctcattatgttttaatatggaagttcttcacaaacaactcttatggtatgctgaaatgcagtatatattctag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13616412 616 - 18804593 acatcagagctcactctactcaggaaatggagataatactaaagaccagctcatagtacatacacatttagctaagtagtttttcttggaacttcacaaatgc--ag----tttttgtattaggtattagttattagttattgctaataatgccactatttgcttacatgttgttatgtgaaaatga---tgttataaagaaataatttgtgtgtacagcttcattactgtgaaaaatacaactagctctaaattgtataaaactatgaaagtttgtgttttcatcacgaagtctgtatttgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaaagacaagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcac-----tgcttcactcatcagaaacacatactacgaatgaaaaaataaaatcagttgaactaaacaatttatttggtgacattgtaaaacttcgatactacataaaaagtaatatgtattattcttcctatattattctcattatgttttaatatggaagttcttcataaacaactcttatggtatgctgaaatgcagtatatattctag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13227878 617 + 18905526 acatcagagctcactctactcaggaaatggagataatactaaagaccagctcatagtacatacacatttagctatgtagtttttcttggaacttcacaaatgc--ag---ttttttgtattaggtattagttattagttattgctaataatgccactatttgcttacatgttgttatgtgaaaatga---tgttataaagaaataatttgtgtgtacagcttcattattgtcaaaaatacaactagctctaaattgtataaaactatgaaagtttgtgttttcatcacgaagtctgtatttgtgttttgaatattaaattttttaggaatgtgttctgatggcatgattttaaagacaagaaaacgttttggaaatgttacacagataaagaagtttgtatcatatcagattgttaatcac-----tgctttactcatcagaaacacatactatgaatgaaaaaataaaatcagttgaactaaacagtttatttggtgacactgtaaaacttcgatactacataaaaagtaatatgtattattcttcctatattattctcattatgttttaatatggaagttcttcataaacaactcttatggcatgctgaaatgtagtatatattctag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60056482 616 - 72318688 acatcagagctcactctactcaggaaatgaagataatactaaagaccagctcatagtacacacacatttagctaagtagtttttcttggaacttcacaaatgc--ag----tttttgtattaggtattagttattagttattgctaataatgccactatttgcttacatgttgttatatgaaaatgat-gtgttataaggaaataatttgtgtgtacagcttcatta-tgtcaaaaacacaaccagctctaaattgtataaaactatgaaagtttgtgttttcatcatgaagtctgtatttgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaatgacaagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcaaattgttaatca------tgcttcactcatcagaaacacatactacgaatgaaaaaataaaatcagttgaatgaaacagtttatttggtgacattgtaaaactttgatactacataaaaagcaatatgtattattcttcctatattattctcattatgttttaatatggaagttcttcataaacaactcttatagcatgctgaaatgcagtatatattctag i chlSab2.chr18 I 2171 C 0 s colAng1.NW_012115433v1 3490354 618 + 6513552 acatcagagctcactctactcaggaaatggagataatactaaagaccagctcatagtacacacacatttagctaagtagtttttcttggaacttcacaaatgc--ag----tttttgtattaggtattagttattagttattgctaataatgccactatttgcttaaatgttgttatatgaagatga---tggtataaagaaataatttgtgtgtacagcttcattattgtcaaaaatacaactagctctaaattgtataaaactatgaaagtttgtgttttcatcacgaagtctgtatttgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaaagacaagaaaacattctggaaatgttacacagataaagaagtttgtatcatatcagattgttcactctga---tgcttcactcatcagaaacacatactatgaatgaacaaataaaatcagttgaactaaacagtttatttggtgacattgtaaaactttgatactatataaaaagtaatatgtattattctacctatattattctcattatgttttaatatggaagttcttcataaacaactcttatggcatgctgaaatgcagtatatattctag i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19445841 597 - 31320352 atatcagagctcactctactcaggaaatggagataatgctgaagaccagcctatagtacacataaatttagctaagtattttttcttggaactttaaaaatgcatagttttttttt--------------ttattatttattactaataatgtcactatttgctcatctgttgctatatgaaaatgatggtgttat----aaataatttgtgtttacagcttcattattgtcaaaaatgcaactggctctaaattgtataaaactatgaaagtttgtgttttcatcacaaagtc------tgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaatgacaagaaaatggtctggaattgctacacagataaagaagtttg-----tatcagactgtgaatcaccagactgcttcactcatcagaaacacttgctatgaatgaaaatatgaaatcaactgaactaaacagtttatttggagatattgtaaaacttttatactacataaa----tatatgtattattctccctagattattctcattatgttttaatacagaagttcatcataaacaacttttagagcatgctgaaatgcagtatatattctgg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1641471 593 + 2203405 atatcagagtttactctactcaggaaatggagataatgctgaagaccagctcatagtacacataaatttagctaagtattttttcttggaactttacaaatgcatag----ttttt--------------ctgttatttattattaataatgtcactatttgctcatctgttattatatgaaaatgatggtgttat----aaataatttgtgtttacagcttcattattgtcaaaaatgcaactggctctaaattgtataaaactatgaaagtttgtgttttcatcacaaagtc------tgtgttttgaattttaaattttttaggaatgtgttctgatggcatgattttaatgacaagaaaacagtcttgaattgttacgcagataaagaaatttg-----tatcagactgtgaatcaccagactgcctcactcatcagaaacacttgctatgcatgaaaaactgaaatcaattgaactaaacagtttatttggtgatattgtaaaactctgatactacataaa----tatatgtattattcttcctagattattctcattacgttttaatacagaggttcatcataaacaactcttagagcatgctgaaatgcagtatatattctgg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3593202 593 - 14941987 atatcagagctcactctactcaggaaatagagataatcctgaagaccagctcatagtacacataaatttagctaagtattttttcttgggactttacaaatgcatag----ttttt--------------ctattatttattactaataatgtcacgatttgctcatctgttgttatatgaaaaggatggtgttat----aaataatttgtgtttacagcttcattattgtcaaaaatgcaactggctctaaattgtataaaactatgaaagtttgtgttttcatcacaaagtc------tgtgttttgaattttaaattttttaggaatgtgttctgatggtatgactttaatgacaagaaaacagtctggaattgttacacagataaagaagtttg-----tatcagactgtgaatcaccagactgcttcactcatcagaaacacttgctatgaatgaaaaaatgaaatcaattgaactaaacagtttatttggtgatattgtaaaactttgatactacagaaa----tatatgtattattcttcctagattattctcattatgttttaatacagaagttcgtcataaacaactcttagagtgtgctgaaatgcagtatatattctag i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111832128 156 + 195471971 I e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=1008981.000000 s hg38.chr18_GL383571v1_alt 127255 135 + 198278 ttttaaaataagatttattgacaatgtttgaattactgaatgcaccattctgcaagaaatttctgtaatataagaaactgatttgatcctaac-ttaaaaatacataaaataaacagcaagtctaatgtctttagt s panTro5.chr18 65037259 135 + 78221452 ttttaagataagattttttgacaatgtttgaattactgaatgaaccattctgcaagaaatttctgtaatataagaaactgatttgatcctaac-ttaaaaatacataaaataaacagcaagtctaatgtctttagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64156369 135 + 77229886 ttttaaaataagattttttgacaatgcttgaattactgaatgaaccattctgcaagaaatttctgtaatataagaaactgatttgatcctaac-ttaaaaatacataaaataaacagcaagtctaatgtctttagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5375885 135 + 17472758 ttttaaaataagatttattgacaatgtttgaattactgaatgaaccattctgcaagaaatttctgtaatataagaaactgatttgatcctaac-ttaaaaatacataaaataaacagcaagtctaatgtctttagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139416342 135 - 152096393 ttttaaaataagttttattgacaatgtttgaattactgaataaaccattctgcaagaaatttttgtaatataagaaactgatttgatcctaac-ttaaaaatacataaaataaacagcaagtctaatgtctttagt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57366411 135 + 70235451 ttttaaaataagttctattaacaatgtttgaattcctgaatgaaccattctgcaagaactttctgtaatataaaaaactgatttgatcctaac-ttaaaaatacataaaataaacaggaagtctaatgtctttagt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63057810 135 - 75711847 ttttaaaataagttctattgacaatgtttgaattcctgaatgaaccattctgcaagaactttctgtaatataaaaaactgatttgatcctaac-ttaaaaatacataaaataaacaggaagtctaatgtctttagt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13617028 135 - 18804593 ttttaaaataagttctattgacaatgtttgaattcctgaatgaaccactctgcaagaactttctgtaatataaaaaactgatttgatcctaac-ttaaaaatacataaaataaacaggaagtctaatgtcttcagt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13228495 135 + 18905526 ttttaaaataagttctattgacaatgtttgaattcctgaatgaaccactctgcaagaactttctgtaatataaaaaactgatttgatcctaac-ttaaaaatacataaaataaacaggaagtctaatgtctttagt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60057098 130 - 72318688 ttttaaaataagttctattgacaatgtttgaattcctgaatgaaccactctgcaagaacattctg-----taaaaaactgatttgatcctaac-ttaaaaatacataaaataaacaggaagtctaatgtctttagt i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3490972 135 + 6513552 ttttaaaataagttctattgacaatgtttgaattcctgaatgaaccactctgcaagaactttctgtaatataaaaaactgatttgatcctaac-ttaaaaatacataaaataaacaggaagtctaatgtctttagt i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19446438 136 - 31320352 ttttttaaaaagttctattgacaatgtttgaattactgaatggagcattctgcaagaactttctgtaatataagaaactgacttgaccccaacttttaaaatgcacaaaataaacagcaagtctaatgtcttttgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1642064 136 + 2203405 tttttaaaaaagttctattgacaatgtttgaattactgaatggagcattctgcaagaactttctgtaatataagaaactgacttgaccccaacttttaaaatacacaagataaacagcaagtctaatgtcttttat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3593795 136 - 14941987 tttttaaaaaagttctattgacaatgtttgaattactgaatggagcattctgcaagaactttctgtaatataagaaactgacttgaccccaacttttaaaatacacaaaataaacagcaagtctaatgtctttcgt i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111832284 117 + 195471971 TTTAATAGGAAGTTCTCTTGGTGATATTTTATCTATTGCATAATCAACTATG-----------------ATAATAAACTAGTTTCATTCTCAC-CATTAATTATGCAAAATAAA-AACTAGTCTAGTGTTAAAAGT i mm10.chr1 I 156 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112297564 27 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=1865380.000000 s hg38.chr18_GL383571v1_alt 127390 268 + 198278 aaattattttaatactttcatgcctggaaGACAG-aca------------cacagacacacacacacac--a----------------cacacacacacac----TTCAATGGgatcttgatattatacatctgtgaaaaattatcaccagacacctccaaatttaacagaatattttgaattttattttcttatcaaagatccacaccagaaaaaacatgaaatccattctttctattaaaatataattgaaatagaattaaat---ttataaggttaatgattaaaagtag-----------------------------ctattga-----tgaaga s panTro5.chr18 65037394 284 + 78221452 aaattattttaatactttcatgcctggaagacag-acagacacacagacacacagacacacacacacac--a----------------cacacacacacacacacTTCAATGGgatcttgatattatacatctgtgaaaaattatcaccagacacctccaaatttaacagaatattttgaattttatattcttatcaaagatccacaccagaaaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaggttaatgattaaaagtag-----------------------------ctattga-----tgaaga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64156504 280 + 77229886 aaattattttaatactttcatgcCTGGAagacag-acagacacacagacacacagacacacagacacac--a----------------cacacacacacac----TTCAATGGgatcttgatattatacatctgtgaaaaattatcaccagacacctccaaatttaacagaatattttgaattttatattcttatcaaagatccacaccagaaaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaggttaatgattaaaagtag-----------------------------ctattga-----tgaaga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5376020 278 + 17472758 aaattattttaatactttcttgcCTGGAagacag-acagacacacagacacacagacacacagacacac--a----------------cacacacacac------TTCAATGGgatcttgatattatacatctgtgaaaaattaccaccagacacctccaaatttaacagaatattttgaattttattttcttatcaaagatccacaccagaaaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaggttaatgattacaagtag-----------------------------ctattga-----tgaaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139416477 266 - 152096393 aaattattttaatacctttatgcctggaaGACAG-aca------------cacacacacacacacacac--a----------------cacacacacac------TTCAATGGgatcttgatattatacatctgtgaaaaattatcaccagacacctccaaatttaacagaatattttgaattttattttattatcaaagatccacaccagaaaaaacatgaaatccattctttctattaaaatgtaattgaaatataattaaat---ttataaggttaatgattaaaagtag-----------------------------ctactga-----tggaga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57366546 276 + 70235451 aaattattttaatactttcatgcctggaaGACAG-acacacacacacacacaaacacacacatgcacat--a----------------cacacacacacac----TACAAT-Ggatcttgatattatacatctgtgaaaaattatcat--gacacctccaaatttaacagaatatttttaattttattttcttatcaaagatcaacaacag-aaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaagttaatgattaaaagtag-----------------------------ctattga-----tgtaga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63057945 276 - 75711847 aaattattttaatactttcatgcctggaaGACAG-acacacacacacacacaaacacacacatgcacat--a----------------cacacacacacac----TACAAT-Ggatcttgatattatacatctgtgaaaaattatcat--gacacctccaaatttaacagaatatttttaattttattttcttatcaaagatcaacaacag-aaagacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaagttaatgattaaaagtag-----------------------------ctattga-----tgtaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13617163 276 - 18804593 aaattattttaatactttcatgcctggaagacag-acacacacacacacacaaacacacacatgcacat--a----------------cacacacacacac----tacaat-ggatcttgatattatacatctgtgaaaaattatcat--gacacctccaaatttaacagaatatttttaattttattttcttatcaaagatcaacaacag-aaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaagttaatgattaaaagtag-----------------------------ctattga-----tgtaga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13228630 272 + 18905526 aaattattttaatactctcacgcctggaaGACAG-----acacacacacacaaacacacacatgcacat--a----------------cacacacacacac----TACAAT-Ggatcttgatattatacatctgtgaaaaattatcat--gacatctccaaatttaacagaatatttttaagtttattttcttatcaaagatcaacaacag-aaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaagttaatgattaaaagtag-----------------------------ctattga-----tgtaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60057228 278 - 72318688 aaattattttaatactttcatgcctggaaGacag-acagacagacacacacacacatacacgtacacataca----------------cacacacacacac----tacaAT-Ggatgttgatattatacatctgtgaaaaactatcat--gacacctccaaatttaacagaatattttgaattttattttcttatcaaagatcaacaacag-aaaaacatgaaatccattctttctattaaaatataattgaaatataattacat---gtgtaaggttaatgattaaaagtag-----------------------------ctattga-----tgtaga i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3491107 266 + 6513552 aaattattttaatactttcatgcctggaaGACAG-ACAGACAGacacacacacacacac------------a----------------cacacacacacac----TACAAT-Ggatcttgatattatacatctgtgaaaaattatcac--aacacctccaaatttaacagaatattttgaattttattttcttatcaaagatcaacaacag-aaaaacatgaaatccattctttctattaaaatataattgaaatataattaaat---ttataaagttaatgattaaaagtag-----------------------------ctattga-----tgtaga i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19446574 297 - 31320352 aaatcattttactattttcatgcctggaaaaca---------cacacacacacacacacacacacacac--actctctctctctctctctctctctctctc----tTCAAT-Ggatct---tattatacatctgtgaaaaattatcaccaggcacctccaaatttaactgaatattttgaattttattttcttatcaaagatccacaccag-aaaaatatgaaatcca----ttctattaaaatat-----------aattaaat---ttataaggttaatggttagatgtagtattattcttcctagattactgaagattactattga-----tgaagg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1642200 277 + 2203405 aaatcattttactattttcatgcctggaaaaca---------ctcacacacacacacacacacacacat--a--------------------cacacacTC----TTCAAT-Ggatct---tattatacatctgtgaaaaattatcaacaagcacttccaaatttaacagaatattttgaattttagcttcttatcaaggatccacaccag-aaaaatatgaaatcca----ttctattaaaatat-----------aattagat---ttataaggttaatgattagatgtagtattattcttcctagattactgaagattattattga-----tgaagg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3593931 291 - 14941987 aaatcattctactattttcatgcctggaaaaca---------cacacacacacacacacacgcacacac--a----------------cacacacacacTC----TTCATG-Ggatct---tattatacatctgtgaaaaattatcaccaggcacctccaaatttaacagaatattttgaattttattttcttatcaaagatccacaccag-aaaaatatgaaatcca----tgcaattaaaatatgattaaaacaaaattaaat---ttataa-gttaatgattagatgtattattattcttcctagattactgaagattactattgt-----tgaagg i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111832401 217 + 195471971 AAATAATCACAAATTTCCCATAATGAGAAGAAA------------------------------ACAAAA--A----------------TTCACAAACATAC----ATCAAT-GGCActtgatatcacacacctgtgacaaactgtc------cgtatccaa--ctcatagaatattttgaatatttttttc-taccaaaagtctcctatag-aaaaatggggagtgca--------------------------tataatttaatgtgttataagttacatgattaatggata-----------------------------tacctgc-----tgaagg i mm10.chr1 C 0 C 0 s canFam3.chr1 112297591 260 - 122678785 AAATCACCTTAATATTTCCATGCCTGGAAGGAAacgcacacacacacacacacacacacacacacagat--a----------------cacacacacTTAC----TTCAAT-AAatcttgattctgcaaatttgtgaaaaatgatcaccaaac----ccaaatttaataggatattttgaatgttattttc-----------acacattag-aaaaacataaaattcatttcttttattgaattctaatt---------taaaat---atacaagactaatatttggaactca-----------------------------ctactgaaggattgaaga i canFam3.chr1 I 27 I 177 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=255656.000000 s hg38.chr18_GL383571v1_alt 127658 35 + 198278 attgaagataaat-----------------tt-taaaaatacaaaatcacttg s panTro5.chr18 65037678 35 + 78221452 attgaagataaat-----------------tt-taaaaatacaaaatcacttg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64156784 35 + 77229886 attgaagataaat-----------------tt-taaaaatacaaaatcacttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5376298 35 + 17472758 attgaagataaat-----------------tt-taaaaatacaaaatcacttg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139416743 35 - 152096393 agtgaaaataaat-----------------tt-taaaaatacaaaatcacttg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57366822 35 + 70235451 attgaagagaaat-----------------tt-taaaaatacaaaatcacttg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63058221 35 - 75711847 attgaagagaaat-----------------tt-taaaaatacaaaatcacttg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13617439 35 - 18804593 attaaagagaaat-----------------tt-taaaaatacaaaatcacttg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13228902 35 + 18905526 attgaagagaaat-----------------tt-taaaaatacaaaatcacttg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60057506 35 - 72318688 attgaagagaaat-----------------tt-taaaaatacaaaatcacttg i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3491373 34 + 6513552 attgaagag-att-----------------tt-taaaaatacaaaatcacctg i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19446871 35 - 31320352 attgaagataaat-----------------tt-taaaaatacaaaatcacttg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1642477 36 + 2203405 attgaagataaat-----------------ttaaaaaaatacaaaatctcttg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3594222 35 - 14941987 atttaagataaat-----------------tt-taaaaatacaaaatcacttg i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111832618 13 + 195471971 actgagg---aat-----------------ct-t------------------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112298028 52 - 122678785 atcataaataaataaaaaaataaaaaaaaaTT-TAACAATACAAAATCGCTGG i canFam3.chr1 I 177 I 101 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=2017528.000000 s hg38.chr18_GL383571v1_alt 127693 256 + 198278 ctttataaaaa-------------------tagataaaagtgaattccatcagcttactgtaattatttcaaattcttgtcttccagtct-agcacc------atgcctctctgagactggct--tctccat-tg-agtgttatgaaatcaacacactaaca-tttaggatcaacattatcccctatgattggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaatc----tgtcacatt-aaaaacttcattgacatacacatgattgattc s panTro5.chr18 65037713 256 + 78221452 ctttataaaaa-------------------tagataaaagtgaattccatcagcttactgtaattatttcaaattcttttcttccagtct-agcacc------atgcctctctgagactggct--tctccat-tg-agtgttatgaaatcaacacactaaca-tttaggatcaacattatctcctatgattggcattgtcatttatccaacctagattatat-aaattaacaacg-aaaatgcaaatc----tgtcacatt-aaaaacttcattgacatacacatgattgattc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64156819 255 + 77229886 ctttataaaaa-------------------tagataaaagtgaattccat-agcttactgtaattatttcaaattcttttcttccagtct-agcgcc------atgcctctctgagactggct--tctccat-tg-agtgttatgaaatcaagacactaaca-tttaggatcaacattatcccctatgattggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaatc----tgtcacatt-aaaaacttcattgacatacacatgattgattc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5376333 256 + 17472758 ctttataaaaa-------------------tagataaaagtgaattccatcagcttactgtaattatttcaaattcttttcttccagtct-agcacc------atgcctctctgagactgcct--tctccat-tg-agtgttatgaaatcaacacactaaca-tttaggatcaacattatcccctatgattggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaatc----tgtcacatt-aaaaacttcattgacatacacatgattgattc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139416778 256 - 152096393 ctttataaaaa-------------------tagataaaagtgaattccatcagcttactgtaattatttcaaattcttttcttccagtct-agcacc------atgcctctctgagactggct--tctccat-tg-agttttatgaaatcaacacactatca-tttaggatcaacattatcccctatgattggcattgtcatttatccaacttaaattatat-aaattaacaacc-aaaatgcaaatt----tatcacatt-aaaaccttcattgacatacacatgattgattc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57366857 256 + 70235451 ctttataaaaa-------------------tagataaaagtgaattccgtcagcttactgtaatcattgcaaattcttttcttccagtct-agcacc------acgcctctctgagactggct--tctccac-tg-agtgttatgaaatcaacacactaaca-tttaagatcaacactatcccctatgagtggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaact----tatcacatt-aaaaacttcattggcatacacgtgattgattc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63058256 256 - 75711847 ctttataaaaa-------------------tagataaaagtgaattccgtcagcttactgtaatcattgcaaattcttttcttccagtct-agcacc------acgcctctctgagactggct--tctccac-tg-agtgttatgaaatcaacacactaaca-tttaagatcaacactatcccctatgagtggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaact----tatcacatt-aaaaacttcattggcatacacgtgattgattc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13617474 256 - 18804593 ctttataaaaa-------------------tagataaaagtgaattccgtcagcttactgtaatcattgcaaattcttttcttccagtct-agcacc------acgcctctctgagactggct--tctccac-tg-agtgttatgaaatcaacacactaaca-tttaagatcaacactatcccctatgagtggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaact----tatcacatt-aaaaacttcattggcatacacgtgattgattc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13228937 256 + 18905526 ctttataaaaa-------------------tagataaaagtgaattccgtcagcttactgtaatcattgcaaattcttttcttccagtct-agcacc------acgcctctctgagaccggct--tctccac-tg-agtgttatgaaatcaacacactaaca-tttaagatcaacactatcccctatgagtggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaatgcaaact----tatcacatt-aaaaacttcattggcatacacgtgattgattc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60057541 256 - 72318688 ctttatgaaaa-------------------tagataaaagtgaattccgtcagcttactgtaatcactgcaaattcttttcttccagtct-agcacc------acgcctctctgagactggct--tctccac-tg-agtgttatgaaatcaacacactaaca-tttaagatcaacactatcccctatgagtggcattgtcatttatccaacctagattacat-aaattaacaacc-aaaatgcaaact----tctcacatt-gaaaacttcattggcatacacatgattgattc i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3491407 256 + 6513552 ctttataaaaa-------------------tagataaaagtgaattccatcagcttactgtaatcattgcaaattcttttcttccagtct-agcacc------acgcctctctgagactggct--tctccac-tg-agtgttatgaaatcaacacactaata-tttaagatcaacactatcccctatgagtggcattgtcatttatccaacctagattatat-aaattaacaacc-aaaacgcaaact----tatcacatt-aaaaacttcattgacatacacatgattgattc i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19446906 245 - 31320352 ctttat---aa-------------------tagacaaaagtgaattccatcagcttactgtaattacttcaaattctcttcttccagtctaagcaac------atgcctatctgagactagct--tctccac-tg-agtgttatgaaatcaacgcataaata-tttaagatcgacactatcccctatgaatgacactgttatttatccaacctagattatat-aaattaacaacc-aaaaagcaagtt----tatca----------cttcattgacatacatatgattgattc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1642513 243 + 2203405 ctttat---aa-------------------tagataaaagtgaattccatcagcttactgtaattacttcaaattcttttcttccagtctaagcaac------atgcctatctgagacttgct--tctccac-tgaagtgttatgaaatcaacacataaacattttaagatcgacactatccc----gagtgacactgtcatttatccaacctagattatat-aaattaacaacc-aaaaagcaagtt----tatca----------ctacgttgacatacacatgattgattc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3594257 244 - 14941987 ctttat---aa-------------------tagataaaagtgaattccatcagcttaccgtaattacttcaaattcttttcttccagtctaagcaac------atgcctatctgagactagct--tctccac-tg-agtgttatgaaatcaatgcataaacg-tttaagatcgacactatcccctatgagtgacactgttatttatccaacctagattatat-aaattaacaaccaaaaaagcaagtt----tatca----------cttcgttgacatac--atgattgattc i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111832631 239 + 195471971 ttttat----a-------------------tgtagaaaaataattccttcaagcttgcctaaattacttctgaatgtttcatc---gtttgatcagt------gtatctttctaagactgaaa--ttcccatgtg-aatgtt------tcaaaatactagca-aataagatagctattatctcctaggaatgatcttgttacttagccaaca-----tatat-caattagtgagt-aaaagg-agatt----tgccatact-aaatttttcactgtcattcataggaatgactg i mm10.chr1 C 0 C 0 s canFam3.chr1 112298181 287 - 122678785 CTTTCAAAaaaatacaaaatcactttatgttacataaaaacaaattatgtgagattattg-atttatctcaaattctttttttttttttc-agtcctttctgggtacctttctaaaactgacttctctcctt-tg-agtgctatgaaataaaaagacagagg--ttaagatagacattaacttctatgagtgacattgtcatttttccaatctaaattagataaaatcaacaagc-aaaatgcaagttcttctatcacattaaaaaacattattgatatacatgaaactgattt i canFam3.chr1 I 101 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e calJac3.chr13 105251558 6518 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=1994114.000000 s hg38.chr18_GL383571v1_alt 127949 251 + 198278 aaaatgcacatatagcagtttagtat-tgggattgctactttacttgta-----acctctgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatatta-tttttatataaattacttatataa-atgatttta--------------------------------------ataaaaaaagtgtgca--------------------------------ttttttg-------------------------------------caaccct------gtcttatt--gcacatttgatctgagtattgaaat--aatatttgatctgttaaatctaataataaaa-------ttattcttatttcatttctc---------ttt--- s panTro5.chr18 65037969 250 + 78221452 aaaatgcacatatagcagtttagtat-tgggattgctacttcacttgta-----acctctgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatatta-tttttatataaattacttatataa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccct------gtcttatt--gcacatttgatctgagtattgaaat--aatatttgatctgttaaatctaataataaaa-------ttattcttatttcatttctc---------ttt--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64157074 247 + 77229886 aaaatgcacatatagcagtttagtat-tgggattgctacttcatttgta-----acctctgtttggtcatagttgagaaacaacaga-------------------------aaattgca-actgt---------------aatatta-tttttatataaattacttatataa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccct------gtcttatt--gcacatttgatctgagtattgaaat--aatatttgatctgttaaatctaataataaaa-------ttattcttatttcatttctc--------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5376589 247 + 17472758 aaaatgcacatatagcagtttagtat-tgggattgctacttcacttgta-----acctctgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatatta-tttttatataaattacttatataa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------tgttttg-------------------------------------caaccct------gtcttatt--gcacatttgatctgagtattgaaat--aatatttgatctgttaaatctaataataaaa-------tta---ttatttcatttctc---------ttt--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139417034 248 - 152096393 aaaatgcacatatagcagtttagtat-tgggactgctacttcacttgta-----acctctgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatatta-tttttatataaattacctatataa-atgatttta--------------------------------------ataaaaaa-gcgtgca--------------------------------ttttttg-------------------------------------caaccct------gtcttatt--gcacatttgatgtgagtattgaaat--aatatttgatctattaaatctaataataaaa-------ttattcttatttcatttctt-----------t--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57367113 246 + 70235451 aaaatgcacacatagcagtttagtgt-tgggactgctacttcacttgta-----acctttgtttggccatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatagta-tttttatataaagtacctatgtaa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccct------atcttatt--gcaca-ttgatctgagtattggaat--aatatttgatctggtaaatctaataataaaa-------tcattcttatttcatttctc--------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63058512 246 - 75711847 aaaatgcacacatagcagtttagtgt-tgggactgctacttcacttgta-----acctttgtttggccatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatagta-tttttatacaaagtacctatgtaa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccct------atcttatt--gcaca-ttgatctgagtattggaat--aatatttgatctggtaaatctaataataaaa-------tcattcttatttcatttctc--------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13617730 246 - 18804593 aaaatgcacacatagcagtttagtgt-tgggactgctacttcacttgta-----acctttgtttggccatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatagta-tttttatataaagtacctatgtaa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccct------atcttatt--gcaca-ttgatctgagtattggaat--aatatttgatctggtaaatctaataataaaa-------tcattcttatttcatttctc--------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13229193 249 + 18905526 aaaatgcacacatagcagtttagtgt-tgggactgctacttcacttgta-----acctttgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatagta-tttttatataaagtacctatgtaa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccct------atcttatt--gcaca-ttgatctgagtattggaat--aatatttgatctggtaaatctaataataaaa-------tcattcttatttcatttctcttt------------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60057797 249 - 72318688 aaaatgcacacatagcagtttagtgt-tgggattgctacttcacttgga-----acctttgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatagta-tttttatgtaaagtacctatgtaa-atgatttta--------------------------------------ataaaaaa-gtgtgcg--------------------------------ttttttg-------------------------------------caaccct------atcttatt--gcaca-ttgatctgagtattggaat--aatatttgatctggtaaatctaataataaaa-------ttattcttatttcatttctc---ttt--------- i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3491663 249 + 6513552 aaaatgcacacatagcagtttagtgt-tgggattgctacttcacttgta-----acctttgtttggtcatagttgagaaacaacaga-------------------------aagttgca-actgt---------------aatagta-tttttatataaagtacatatgtaa-atgatttta--------------------------------------ataaaaaa-gtgtgca--------------------------------ttttttg-------------------------------------caaccgt------atctaatt--gcaca-ttgatccgagtactggaat--aatatttgatctggtaaatctaataataaaa-------ttattcttatttcatttctc------ttt------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105258076 236 + 117903854 aaaatgcacatatagaagtttagtac-tgggattgctacttcacttata-----acctttgtttgattatagttgtggaacaacaga-------------------------aagttgca-actgt---------------aataata-tttttatataaattacctataaag-atgatttta--------------------------------------atgaaaaatgtgtgca--------------------------------ttttttg-------------------------------------caaccct------ttcttatt--gtaca-----tttgagtattga-----aatatttgatctgttaaagctaataataaaa-------ttat--tagtttcatt--tt--------------- i calJac3.chr13 I 6518 I 1 s saiBol1.JH378121 19447151 235 - 31320352 aaaatgcccatatagaagtttagtac-tgggattgctacttcacttata-----acctttgtttgattataattgtggaacaataga-------------------------aagttgta-actgt---------------aataata-tttttatataaattagctataaaa-atgatttta--------------------------------------atgaaaaatgtgtgca--------------------------------ttttttg-------------------------------------caatcct---------ttatt--gtaca-----tttgagtattga-----aatatttgatctgttaaatctaataataaaa-------ttat--tagtttcatttctt--------------- i saiBol1.JH378121 C 0 I 1 s cebCap1.NW_016107689v1 1642756 232 + 2203405 -aaatgcacatatggaagtttagtac-tgggattgctacttcacttata-----acctttgtttgattatagttgtggaacaaaaga-------------------------aagttgca-actgt---------------aataata-tttttatataaattacctataaaa-atgatttta--------------------------------------atgaaaaatgtgtgca--------------------------------ttttttg-------------------------------------caatcct------ttcttatt--gtaca-----tttgagtattga-----aatatttgatctgtt-----taataataaaa-------ttat--tagtttcatttctt--------------- i cebCap1.NW_016107689v1 C 0 I 1 s aotNan1.NW_018502140v1 3594501 239 - 14941987 aaaatgcacatatggaagtttagtac-cgggattgctacttcacttata-----acctttgtttgattatagttgtggaacaataga-------------------------aagttgca-actgt---------------aataatattttttatataaattacctataaaa-atgatttta--------------------------------------atgaaaaatgtgtgca--------------------------------ttttttg-------------------------------------caaccct------ttcttatt--gtaca-----tttgagtattga-----aatatttgatctgttaaatctaataataaaa-------ttat--tagtttcatttctt--------------- i aotNan1.NW_018502140v1 C 0 I 1 s mm10.chr1 111832870 407 + 195471971 aaaatatgcatataaaagtataacacataaatcctttattccattcatattcatacttttaattgttaatagttgcagcacaacacatgttgtaccaattagatttctatatagactgcatactgcctagtctaatccacaagcagtc-ttattttataagttatttatttaatgttattttatgtatATTGGTGTGAGGCAatcccatgggactggagctacagacag-ctgtgaactgccatatggattctgggaatttaagtgaagtcttttggaagaacagccagtgctcttaatcactgagAAATTTTCAATCCT------TCCTTCTCTAGAATATTTGATATAAATATGGCAAT---ATATTTAAT-TGCTAAAGCTAATAATAAAAAGGCTTCTGAT--GTATTTCTTTCCTT--------------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112298468 248 - 122678785 aaaatgtgttcatgggagtttagtat-ggagagtgcaacttcactcaga-----gtct----ttgatcaaggttggagaacaacaaa-------------------------aagataca-actgt---------------aatat---tcccaatactaattgcctccatcc-atgatttca--------------------------------------gtgaatga--taggcattg-----------------------------ttttttg-------------------------------------caatcctctttttttcctatt--gcgtgtttagtctaattattggaatgtgcttttatatctgttaggtctaaaaataaaa-------------ttgtttcatttctc------------ttt i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I e manLeu1.NW_012106698v1 394654 760 - 1517660 M a score=1850073.000000 s hg38.chr18_GL383571v1_alt 128200 208 + 198278 --tatttcatttttctaataagtttatttttatgttt------gtttttaattata---------------tttta------------------caaaagtattggtc---------------------------tctgacaattggaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtccctcacaacagatggtttgagaaacag-tgGTATAAAATTTATCTCATATTAAAGACAAGG------AAAAAATAGGATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGAGTTATATTG s panTro5.chr18 65038219 208 + 78221452 --tatttcatttttctaataattttatttttatgttt------gtttttaattata---------------tttta------------------caaaggcataggtc---------------------------tctgacaattggaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtccctcacaacagatggtttgagaaacag-tgGTataaaatttatctcatattaaagacaagg------aaaaaataggatgattaatagtttttca-------------------------------------------------------------------------------------------------c------------agaaaa-------------ttgagttatattg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64157321 208 + 77229886 --tatttcatttttctaataattttatttttatgttt------gtttttaattata---------------tttta------------------caaaagcataggtc---------------------------tctgacaattggaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtccctcacaacagatggtttgagaaacag-tgGTATCAAATTTATCTCATATTAAAgacaagg------aaaaaataggatgattaatagtttttca-------------------------------------------------------------------------------------------------c------------agaaaa-------------ttgagttatattg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5376836 208 + 17472758 --tatttcatttttctaataattttatttttatgttt------gtttttaattata---------------tttta------------------caaaagcataggtc---------------------------tctgacaattggaaatta---------------------------------------------------------------------------------------------------------------gaaagcaaaactgtccctcacaacagatggtttgagaaacag-tgGTataaaatttatctcatattaaagacaagg------agaaaataggatgattaatagtttttca-------------------------------------------------------------------------------------------------c------------agaaaa-------------ttgagttatattg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139417282 208 - 152096393 --tatttcatttttctaataattttatttttaagttt------gtttttaattgta---------------tttta------------------caaaagcatagctc---------------------------tctgacaattggaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgcccctcacaacagatggtttgagaaacag-tgCTATAAAATTTATCTCATATTAAAGACAAGG------AAAAAATAGGATTATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGAGTTATATTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57367359 182 + 70235451 ---------------------ttttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaatag-tgCTATAAAATTTATCTCATAATAAGGA-------------AAAATAGAATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGGGTTATATTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63058758 182 - 75711847 ---------------------ttttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaatag-tgCTATAAAATTTATCTCATAATAAGGA-------------AAAATAGAATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGGGTTATATTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13617976 182 - 18804593 ---------------------ttttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaatag-tgCTATAAAATTTATCTCATAATAAGGA-------------AAAATAGAATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGGGTTATATTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13229442 201 + 18905526 --tatttcctttttctaataattttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaacag-tgCTATAAAATTTATCTCATAATAAGGA-------------AAAATAGAATGATGAATACTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGGGTTATATTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60058046 199 - 72318688 --tatttcatttttcgaataattttatttttatgttt------gtttttaattgtg-----------------tta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaacag-tgCTATAAAATTTATCTCATAATAAGGA-------------AAAACAGAATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGGGTTATATTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 395414 201 - 1517660 --TATTTCctttttctaataattttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaacag-tgCTATAAAATTTATCTCATAATAAGGA-------------AAAATAGAATGATGAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGGGTTATATTG i manLeu1.NW_012106698v1 M 760 C 0 s colAng1.NW_012115433v1 3491912 201 + 6513552 --tatttcatttttctaataattttacttttatgttt------gtttttaattgca---------------tttta------------------caaaagcataggtc---------------------------tctgacaattagaaatta---------------------------------------------------------------------------------------------------------------aaaagcaaaactgtacctcacaataaatggtatgagaaacag-tgCTATAAAATTTATCTcataataagga-------------aaaatagaatgattaatagtttttca-------------------------------------------------------------------------------------------------c------------agaaaa-------------ttgggttatattg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105258313 208 + 117903854 --tatttcatttttctaataattttatttttatgttt------gtttttaatcgta---------------attta------------------caaaagcataggtc---------------------------tctgacaattgtaaatta---------------------------------------------------------------------------------------------------------------aaaaga-aaactatccctcacaacagatggtatgagaaacag-tgCTATAAAATTTATCTCATATCAAAGACAAGGA-----AAAAAATAGGATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGAGTTATATTG i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19447387 208 - 31320352 --tatttcatttttctaataattttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataagtc---------------------------tttgacaattgtaaatta---------------------------------------------------------------------------------------------------------------aaaagc-aaactatccctgacaacagatggtatgagaaacaG-CGCTATAAAATTTATCTCATATCAAAAACAAGGA-----AAAAAATAGGATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGAGTTATATTG i saiBol1.JH378121 I 1 C 0 s cebCap1.NW_016107689v1 1642989 207 + 2203405 --tatttcatttttctaataattttatttttatgtct------gtttttaattgta---------------tttta------------------caaaagtacaggtc---------------------------tttgacaattgtaaatta---------------------------------------------------------------------------------------------------------------aaaagc-aaactatccctcacaacagatggtatgagaaacag-tgCTataaaatttatctcatatcaaagacaagg------aaaaaataggatgattaatagtttttca-------------------------------------------------------------------------------------------------c------------agaaaa-------------ttgagttatattg i cebCap1.NW_016107689v1 I 1 C 0 s aotNan1.NW_018502140v1 3594741 208 - 14941987 --tatttcatttttctaataattttatttttatgttt------gtttttaattgta---------------tttta------------------caaaagcataggtc---------------------------tctgacaattgtaaatta---------------------------------------------------------------------------------------------------------------aaaagc-aaactatccctcacgacagatggtatgagaaatag-tgCTATAAAATTTATCTCATATCAAAGACAAGGA-----AAAAAATAGGATGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------C------------AGAAAA-------------TTGAGTTATATTG i aotNan1.NW_018502140v1 I 1 C 0 s mm10.chr1 111833277 488 + 195471971 --TACTTCAATTTT------ATTTTGTATTTGTCATT-------TTTTTAAATGTAGCATAGTACAGGTGACTTTAGAAATTGAAAAGCAggggcaagaagatagctcagaatgtaaaactgcttatcactaaagtctggcaacctgagtttgatccctggaactgatgtaaggtggaagaggtgaacttattcctcactgttatcctttgacttccacatataagctgtagtgaatgcacatacacacaccacaAAAACACGCAAAAACAAACCTTTTCTTCAGAAGAAATAGTACGTCAAGCAACTACTATAAAATTCAATTCATGTTGATCATAGAGA-TAACAAGGCATAAGACGAAAAACTTTTTTTCATTTACttatttattccctttaaatcccaaggtcatgacccccttttcccaaaagcccctcacacagctcttcccccattcccccctccccttctcttc------------tgaaaagggaaaggctcccctgagtttcacta i mm10.chr1 C 0 I 47 s canFam3.chr1 112298716 228 - 122678785 tatagttcatttttctagcaaccttatttttttttttaatttcgtatctcattgca---------------tttta------------------caaaaatgtagatc---------------------------atggaccgttggaaaatg---------------------------------------------------------------------------------------------------------------aaaagc-aaactgtcccataccacagatggcttgagaaatac-tAGTGTAAAAGCCATTCCATATTAAAGATAAGGGAAAAAAAGCCATAGAAAGATTAATAGTTTTTCA-------------------------------------------------------------------------------------------------CAGGGGAAAAAGAAGAAAA-------------GCAACTTG----- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1259415 21 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=8383627.000000 s hg38.chr18_GL383571v1_alt 128408 696 + 198278 TAGCTAGGTGCCCAAAGAATGTTAATAAACATCAAACTGCAAAGTACAGTAgtctttaataaagccctatagtgggttggctcttagccctgtcttgttaaaattttaattaataaccaggaggaagagagataaagggcatgtttttaagatttgtagacggcagtaagct-aggagtgataactaactgaacagacacaaaatccagggaaa--aagtggttttgatcatctgtcatgctgtgtagaagctcagacaacatTTTATGGAACTCAAGCAAAAGTCTGGTACTTTACAAAACTCAGTGGTGTACTCT------CAAAGAAAAGGAAAGCTTTTTGGAGTAGTTCCTT-------AAAAAAGAAAAA--TTTGGAAATTTTAATTGCATGTGCAAATACATTATGATTAGCAGAATTAGGCTCTTGAAAA-TTCTAACACAGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTTTCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTGA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGAGGGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT s panTro5.chr18 65038427 696 + 78221452 tagctaggtgcccaaagaatgttaataaacatcaaactgcaaagtacagtagtctttaataaagccctatagtgggttggctcttagccctgtcttgttaaaatttgaattaataaccaggaggaagagagataaagggcatgtttttaagatttgtagacggcagtaagct-aggattgataactaactgaatagacacaaaatccagggaaa--aagtggttttgatcatctgtcatgctgtgtagaagctcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtgtactct------caaagaaaaggaaagctttttggagtagttcctt-------aaaaaagaaaaa--tttggaaattttaattgcatgtgcaaatacattatgattagcagaattaggctcttgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTTTCCCATTATTCTCCAGGCTCAAAAGTCAATTGCAAACTGGATTTTTATTTCTGCCTTTGTGA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGAGGGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64157529 696 + 77229886 tagctaggtgcccaaagaatgttaataaacatcaaactgcaaagtacagtagtctttaataaagccctatagtgggttggctcttagccctgtcttgttaaaattttaattaataaccaggaggaagagagataaagggcatgtttttaagatttgtagacggcagtaagct-aggagtgataactaactgaatagacacaaaatccagggaaa--aagtggttttgatcatctgtcatgctgtgtagaagctcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtgtactct------caaagaaaaggaaaactttttggagtagttcctt-------aaaaaagaaaaa--tttggaaattttaattgcatgtgcaaatacattatgattagcagaattaggctcttgaaaa-ttctaacacaGAAAGACACTCTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTTTCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGACTTTTATTTCTGCCTTTGTGA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGAGGGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5377044 696 + 17472758 tagctaggtgcccaaagaatgttaataaacatcaaactgcaaagtacagtagtctttaataaagccctatagtgggttggctcttagccctgtcttgttaaaattttaattaataaccaggaggaagagagataaagggcatgtttttaagatttgtagacggcagtaagct-aggagtgataactaactgaatagacacaaaatccagggaaa--aagtggttttgatcatctgtcatactgtgtagaagctcagacaacattttatggaactcaagcaaaagtctgatactttacaaaactcagtggtgtactct------caaagaaaaggaaagctttttggagtagttcctt-------aaaaaagaaaaa--tttggaaattttaattgcatgtgcaaatacattatgattagcagaattaggctcttgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTTTCCCATTATTCTCCAGGCTTAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTGA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGAGGGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139417490 681 - 152096393 TAGTTAGGtgcccaaagaatgttaataaacatcaaactgcaaagtacagtagtctttaataaagccctatagtgggttggctcttagccctgtcttgttaaaattttaattaataaccaggaggaagagagataaagggcatgtttttaagctttgtagatggcagtaagct-aggagtgataactaactcaatagacacaaaacccagggaaa----------------atctgtcatgctgtgtagaagctcaggcaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtatacttt------caaagaaaagaaaagcttttcggagtagttcctt--------taaaagaaaaa--tttggaaattttaattgcatgtgcaaatacactatgattagcagaattaggctcttgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACTA-GTTAACATGGGTGAAGTTTCCCATTATTCTTCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTATCA-AGTATAAAGAATTTTTCTACTGATCATGATCATCTCTCCA-ATGTTCAAATCCTAAATCAAATGACC-TGAGGGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57367541 695 + 70235451 TAGTGAGGtgcccaaagaatgttaataaacatcaaactgcaaagtgctgtagtctttactaaagccctacagtgggctggctcttagccctgtcttgttaaaattttaattaataaccaggaggaaaagagataaaggacatgtttttaagatttgtagatggcagcaagct-aggagtgataactaactcaacagacacaaaatcaagagaaa--aagtggttttgaccatctgtcatactgcatagaaactcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtatacttt-----caaaaaaaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--ttcagaaattttgatttcatgtgcaaatactttatgattagtgggatgaggctcctgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63058940 695 - 75711847 TAGTGAGGtgcccaaagaatgttaataaacatcaaactgcaaagtgctgtagtctttactaaagccctacagtgggctggctcttagccctgtcttgttaaaattttaattaataaccaggaggaaaagagataaaggacatgtttttaagatttgtagatggcagcaagct-aggagtgataactaactcaacagacacaaaatcaagagaaa--aagtggttttgaccatctgtcatactgcatagaaactcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtatacttt-----caaaaaaaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--ttcagaaattttgattgcatgtgcaaacactttatgattagtgggatgaggctcctgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13618158 695 - 18804593 TAGTGAGGtgcccaaagaatgttaataaacatcaaactgcaaagtgctgtagtctttactaaagccctatagtgggctggcttttagccctgtcttgttaaaattttaattaataaccaggaggaaaagagataaaggacatgtttttaagatttgtagatggcagcaagct-aggagtgataactaactcaacagacacaaaatcaagagaaa--aagtggttttgaccatctgtcatactgcatagaaactcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtatacttt-----caaaaaaaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--ttcagaaattttgattgcatgtgcaaatactttatgattagtcggatgaggctcctgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTTCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13229643 695 + 18905526 TAGTGAGGtgcccaaagaatgttaataaacatcaaactgcaaagtgctgtagtctttactaaagccctatagtgggctggctcttagccctgtcttgttaaaattttaattaataactaggaggaaaagagataaaggacatgtttttaagatttgtagatggcagcaagct-aggagtgataactaactcaacagacacaaaatcaagggaaa--aagtggttttgaccatctgtcatactgcatagaaactcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtatacttt-----caaaaaaaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--ttcagaaattttgattgcatgtgcaaatactttatgattagtgggatgaggctcctgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60058245 696 - 72318688 TAGTGAGGTGCCCAAAGAATGTTAATAAACATCAAACTGCAAAGTGCTGTAgtctttactaaagccctatagtgggctggctcttagccctgtcttgttaaaattctaattaataaccaggaagaaaagagataaaggacatgtttttaagatttgtagatggcagcaagct-aggagtgataactaacTCAACAGACACAAAATCAAGGGAAA--AAGTGGTTTTGACCATCTGTCATGTTGCATAGAAACTCAGACAATATTTTATGGAACTCAAGCAAAAGTCTGGTACTTTACAAAACTCAGTGGTATACTTT----CAAAAAAAAAAGGAAAGCTTTTTGGAGTAGTTCCTT--------AAAAAGAAAAA--TTCGGAAATTTTGATTGCATGTGCAAATACTTTACGGTTAGTGGGATGAGGCTCCTGAAAA-TTCTAACACAGAAAGACATTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 395615 700 - 1517660 TAGTGAGGtgcccaaagaatgttaataaacatcaaactgcaaagtgctgtagtctttactaaagccctatagtgggctggctcttagccctgtcttgttaaaattttaattaataaccaggaggaaaagagataaaggacatgtttttaagatttgtagatggcagcaagct-aggagtgataactaactcaacagacacaaaatcaagggaaa--aagtggttttgaccatctgtcatactgcatagaaactcagacaacattttatggaactcaagcaaaagtctggtactttacaaaactcagtggtatactttaaaaaaaaaaaaaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--ttcagaaattttgattgcatgtgcaaatactttatgattagtgggatgaggctcctgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTCCAGGCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTTA-AGTATAACGAATTTTTCTTCTGATCATGATCATCTCTCCA-TCGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTCAGAGCTGGGCAAAAGGTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3492113 696 + 6513552 tagcgacgtgcccaaagaatgttaataaacaccaaactgcaaagtgctgtagtctttactaaagccctatagtgggctggctcttagccctgtcttgttaaaattttaattaataaccaggaggaaaagagataaagggcatgtttttaagatttgtagatggcagcaagct-aggagtgataactaactcaatagatacaaaatcaaggggaa--aagtggttttgaccatctgtcatgctgcatagaaactcagacaacattttatggaactcaagcaaaagtctggtacttcacaaaactcagtggtatacttt--tttttaaaaaaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--tttggaaattttgattgcatgtgcaaatacattatgattaacgggatgaggctcctgaaaa-ttctaacacaGAAAGACACTTTGTTTGCAAAAGACAA-GTTAACATGGGTGAAGTATCCCATTATTCTCCAGACTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTGTAAAGAATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGACC-TGA-GGCTT-T--TTGTGTCCTGGA-CCTTCAGTGG------TACAATCAAGAAGAGCCAT-GGGATTCAAAGCGGAAGTGTC--AGCTGCGCAAAAGGTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105258521 687 + 117903854 TAGCTAGGTGGCCAAAGAATGTTAATAAACATCAAACTGCAAAGTACAATATtctttaacaaagccctatagtgggttggctgctagccctgcctttttaaaattttaattaataacagggaggaagacagataaagggcatgtttttaagatgtgtagatggcagcaagct-aagagtaatgactaactcaatagacacaaaatcaagggaaa--acgtggttttgaccatctgtcatgctatgtagaaacacagaaaacattttacagaactcaagcaaaa-tctggtacttttcaaaactcagcagtatacttt------caaaggaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--tccggagattttaatggcatgtgcaaatacattatggttagt-ggatgaggctcctgaaaa--tctaacacaaAAAGACA----CTTTGCAAAATAGAA-GGTAACATGGGTGAAGTATCCCATTATTCTCCAGTCTCGAAAGTCAATTTCAAACTGAATTTTTATTTCTGCCTTTGTCA-AGTATAAAGGATGTTTCTTCCGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGGCC-TGAGGGCTT-T--TTGTGTCCTGGA-CCATCAGT-G------TACAATCGAGAAGAGTCAT-GGGATTCAAAGTGGAAGTGTCAGAGCTGGGGGAAAGGTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19447595 693 - 31320352 TAGCTAGGTGGCCAAAGTATGTTAATAAACAGTAAACTGCAAAGTACAATATtctttaacaaagctctatagtgggttggctgttagccctgccttgttaaaattttaattaataaccgggaggaagacagataaagggcatgtttttaagatttgtagatggcagcaagct-aggagtaataactaactcaatagacacaaaatcaagggaaa--acgtggttttgaccatctgtcatgctatgtagaaacacagacaacattttacagaactcatgcaaaa-tctggtacttttcaaaactcagtggtatacttt------caaaggaaaggaaggctttttggagtagctcctt--------aaaaagaaaaa--tctggagattttaattgcatgcacaaatacattatggttagt-ggatgaggctcctgaaaa-ttctaatacaaAAAGACACTTTCTTTGCAAAACAGAA-GGTAACATGGGTGAAGTATCCCATTATTCTCCAGTCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGGATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGGAC-TGAGGGCTT-T--TTGTGTCCTGGA-CCATCGGTGG------TATAATGGAGAAGAGTCAT-GGGATTCAAAGTGGAAGTGTCAGAGCTGGGCGAAAGGTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1643196 688 + 2203405 tagctaggtggccaaagaatgttaataaacatcaaactgcaaagtacaatgttctttgacaaagctctatagtgggttggctgttagccctgccttgttaaaattttaattaataactgggaggaagacaaataaagggcatgtttttaagatttgtagatggcagcaagct-aggagtaataactaactcaatagacacaaaatcaagggaaa--atgtggttttgaccatctgtcatgctatgtagaaacacagacaacactttacagaactcaagcaaaa-tctggtacttttcaaaactcagtggtatacttt------caaaggaaaggaaagctttttggagtagttcctt--------aaaaagaaaaa--tctggagattttaattgcatgtgcaaatacattatggttagt-ggatgaggctcctgaaaa-ttctaacacaaaaagacg------ctgcaaaatagaa-gGTAACATGGGTGAAGCATCCCATTATTCTCCAGTCTCAAAAGTCAATTTCAAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGGATTTTTCTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGGCCTTGAGGGCTT-T--TTGTGTCCTGGA-CCATCGGTGG------TACAATCGAGCAGAGTCAC-GAGATTCAAAGCGGAAGTGTCAGAGCTGGGCGAATGGTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3594949 691 - 14941987 TAGCTAGGTGGCCAAAGAATGTTAATAAACATCAAACTGCAAAGTACAATATTCTTTAACAAAgccctatagtgggttggctgttagccctgctttgttaaaattttaattaataacctggaggaagacagataaagggcatgtttttaagatttgtagatggcagcaagct-aggagtaataactaactcagtagacacaaaatcaagggaaa--acatggttttgaccatctgtcatgctatgtagaaacacagacaacattttacagaactcaggcaaaa-tccggtacttttcaaaactcagtggtatacttt------caaagcaaaggaaaactttttggagtagttcctt--------aaaaagaaaaa--tctggagattttaattgcatgtgcaaatacattacggttagt-ggatgaggctcctgaaaa-ttctaacacaaAAAGACACTTCGTTTGCAAAAC--AA-GGTAACATGGGTGAAGTATCCCATTATTCTCCAGTCTCAAAAGTCAATTTCGAACTGGATTTTTATTTCTGCCTTTGTCA-AGTATAAAGGATTTTTTTTCTGATCATGATCATCTCTCCA-TTGTTCAAATCCTAAATCAAATGGCC-TGAGGGCTT-T--TTGTGTCCTGGA-CCATCAGTGG------TACAATAGAGAAGAGTCAT-GGGATTCAAAGTGGAAGTGTCAGAGCTGGGCGAAAGGTTTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1259436 697 - 1406956 TAGCTAGatgtccagaaaatgttaataaatatcaaactgcaaagtgcagtagtctttaacaaagccttatagtgtgttggctcttagctctgttgtattaaaaatttaattaataaccaggaggaagatagataaagggcatggttttaagatttgtagaaggtagcaagct-gggaatgataactaaagcaatagaaagaaaatcaagagaaa--aaatgatttcaaccatctaccatgctgtgtagaaacccagacaacattttatagaactcaaacagcagtctggtacttttcaaaactcagtggtgtaattt------cagagaaaagaaaacctttttagagtagctcctcaaaaa--aaaaaagaaaaa--tctggagattttaattggatgtgcaagcacattatgattagcaggatgaggttcctaaaaa-ttctaacacaGAGAGACACT----TTTCAAAATAAAAGGTTAACATGGGTGTTCTATTCCACCATTCTCCAGAATCAAAGGAAAATTTCAAACTAGATCTTTATTTCTGCCTTTATCAGGGTGTAAAATGTTTTTGTTCTGATCAAGATCATCTTTCAA-TTGTCCAAATCCTAAATCAAATGGCC-TGAAGGCTTAG--GTATGTCCT-GA-CCTTCACTGG------CACAA--AAGAAGGGCCAT-GGGATTCAAAGTGGAAGTGTCAGAGCTGGGCAGAAGATTTT i proCoq1.NW_012148742v1 I 21 C 0 s mm10.chr1 111833812 649 + 195471971 AAATTGAATTCCAAAATATTGTCAGTACACATTAAATTTAAAAGTTTAATGGTCTTCAACAAAATATTATACTGTGTTGgctcttagctcagtcgtgttaaaaatttaatgaa----caggaagaagacagaaaaagggcatagttttaagatttgtagacagcagcaagctaaggaatgataactaatgcaacaaaattaaaatcaggagaaa-aaaatggttctgaccatctggcacactgtgtagaatccCAGACAGATTGTTATAGAACTCAAACAAATGTCTGGCACTTTTCATATTTTAGTAGTTTAATTT------CAGAAAAGTGGAGACCTCTTGGGAGTAGTTCttttaaaattaaaaaataaaaatGTCTGGAGTTTAAAATTGAATGTGCAAATATAATTTCATTA-CAAGATGAAGTTCATAAAAT-TTTCAACACAGATATATAGGCT----------------GTTTACATGGAT----------ATTATACTCTA--CTCTAAGTACAATTTTATATCAG------TTTCCTGTTTTTGTCG-AATAT------TTTCTTTCCTGATCATG------TCCCAA-GTATCAACATTCTAAATCTAATGTCA-AGA--ATCT-T--AGGTACGTTAGAGTCTTCAGTG------------TCAACAAGAGCTA--GGGAATCAAAGAGTAAAGGTCAGAGTTGAATCTCAAGTTTT i mm10.chr1 I 47 I 3699 s canFam3.chr1 112298944 699 - 122678785 TAGCTAGAAGcccaaagaatgttaataaatatcaaactacaaagtggagtagtctttagagaagtcccacagtgagttggcaatgagccctgtcttgttaaaaatttaattaataaccgggaggaagacagat-aagggcatggctctaagatttgtagatggcagcaagcc-gggagtgataactaaagcattagaaataaaattaggagaaaaaaaatggttttggccatctggtatactgtgtagaaacccagacaaagttttatagtaatgtaatggaagtctggtacttttcaaaaCTTGGTGGTGTTATTT---CAGAAAAAAAAAGGGAAACCTTAAAAAATAAAACC----------AACAACAAAGC--CCTATATATTTAAATTGGACTTACATGGACATTGTGATTAGCAGCACAGGGTT--TGAAAACTTCTA----AGAGAAAGACCAGATTTGCAAAATAGAA-GGTTA-ATGGGTATTCTATATCACTACTCTCCTGGCTCAAAGAAAACCTTCAAACTATATTTTTATTTCTGCCTTTGTGG-GATATAAAGGATATTCCTTCCCATCCCAATCAGCTCTCAATTTGTTCAAGTCCTGAACCTCCTGGCC-TGG-GGCCG-CAGGTGTGTCCCAGA-CCTTCAGCGGCCTTCTTCCCATCAAGAAGGGCCATGGGGGTTCCAGGTGCAAGAGG-ACAGCGGGGCAGCATGTTTG i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=834738.000000 s hg38.chr18_GL383571v1_alt 129104 75 + 198278 TGGCACAGATGTGAGTATTTCTCTGCAAGCCTGAAGCTCAGTGGGCAACAGGACAGGCTGACTCTGGGTATTGGC s panTro5.chr18 65039123 75 + 78221452 TGGCACAGATGTGAGTATTTCTCTACAAGCCTGAAGCTCAGTGGGCAACAGGACAGGCTGACTCTGGGTATTGGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158225 75 + 77229886 TGGCACAGATGTGAGTATTTCTCTGCAAGCCTGAAACTCAGTGGGCAACAGGACAGGCTGACTCTGGGTATTGGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5377740 75 + 17472758 TGGCACAGATGTGAGTATTTCTCTGCAAGCCTGAAGCTCAGTGGGCAACAGGACAGGCTGACTCTGGGTATTGGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418171 75 - 152096393 TGGCACAGATGTGGGTATTTCTCTGCAAGCATGAAGCTCACTGGGCAACAGGACAGGCTGACTCTGGGTACTGGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368236 75 + 70235451 TGGCACAGTTGTGAGTGTTTCTCTGCAAGCATGAAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGTACTGGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63059635 75 - 75711847 TGGCACAGTTGTGAGTGTTTCTCTGCAAGCATGAAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGTACTGGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13618853 75 - 18804593 TGGCACAGTTGTGAGTGTTTCTCTGCAAGCATGAAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGTACTGGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230338 75 + 18905526 TGGCACAGTTGTGAGTATTTCCCTGCAAGCATGAAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGTACTGGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60058941 75 - 72318688 TGGCACAGTTGTGAGTATTTCTCTGCAAGCATGGAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGTACTGGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396315 75 - 1517660 TGGCACAGTTGTGAGTATTTCTCTGCAAGCATGAAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGTACTGGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3492809 75 + 6513552 TGGCACAGTTGTGAGTATTTCTCTGCAAGCATGAAGCTCAGTGGGCAACAGGACAGGCTGATTCTGGGCACTGGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105259208 74 + 117903854 TAGCACAGATG-ATGTGTTTGTCTGCAAGCATGAAGCTCAATGGGCAACAAGACAGGCTGATTCTGGATACTGGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19448288 74 - 31320352 TGGCACAGACG-ATGTGTTTGTCTGCAAGCATGAAGCTCAGTGGGCAACAAGACAGGCTGATTCTGGATACTGGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1643884 74 + 2203405 TGGCACAGATG-ATGTGTTTGTCTGCAAGCATGAAGCTCAGTGGGCAACAAGACAGGCTGATTCTGGATACTGGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3595640 74 - 14941987 TGGCACAGATG-ATGTGTTTGTCTGCAAGCATGAAGCTCAGTGGGCAACAAGACAGGCTGATTCTGAATACTGGC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1260133 70 - 1406956 GAGCACGGATGTGAGTGTGTCTCTGCAAACATGAAGTTCACTGAGT-----GACAGGCTGACTCTGGATATTGGC i proCoq1.NW_012148742v1 C 0 I 112 s canFam3.chr1 112299643 70 - 122678785 GGGCACAGAGGAGAGCCTGTCTGGGCGAACATGATGCTCGACAGAT-----GACAGGCTGACTCTGGATGTCGGC i canFam3.chr1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=1159998.000000 s hg38.chr18_GL383571v1_alt 129179 115 + 198278 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGATGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTGAGAAGCTAAGTT- s panTro5.chr18 65039198 115 + 78221452 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGATGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTGAGAATCTAAGTT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158300 115 + 77229886 AGCAGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGATGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTGAGAAGCTAAGTT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5377815 115 + 17472758 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGATGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTGAGAAGCTAAGTT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418246 114 - 152096393 AGCTGTTCAAGCAAGAGGAGAGTGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGATGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTGAGAAGCTAAG-T- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368311 114 + 70235451 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTGCTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCATTACTCCTGAGAAGCTAAG-T- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63059710 114 - 75711847 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCATTACTCCTGAGAAGCTAAG-T- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13618928 114 - 18804593 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCTTTACTCCTGAGAAGCTAAG-T- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230413 114 + 18905526 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCTTTACTCCTGAGAAGCTAAG-T- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059016 114 - 72318688 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTGAGAAGCTAAG-T- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396390 114 - 1517660 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCTTTACTCCTGAGAAGCTAAG-T- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3492884 114 + 6513552 AGCTGTTCAAGCAAGAGGAGAGCGAGAGTGACAGCTCTGGGCCAAGTTGGTTTCCCCTACTCTCCCTGGTGTTGGGATTGAAGTCTGTCTGTCTTTACCCCTAAGAAGCTAAG-T- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105259282 113 + 117903854 AGCTGTCCAAGCAGGAGGAGAGCGAGTGTGACAGCTCTGGGCCACGCTGGTTTCCCCTACTCTCCATGGTGTTGGGATTGAAGTCTGTCTGCCTTTACTCCTGACAAGCTTAG--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19448362 110 - 31320352 AGCTGTCCAAGC---AAGAGAACAAGAGTGACAGCTCTGGGCCACGCTGGTTTCCCCTACTCTCCATGGTGTTGGGATTGAAGTCTGTCTGCCTTTACTCCTGAGAAGCTTAG--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1643958 113 + 2203405 AGCTGTCCAAGCAAGAGGAGAGCGAGAGTGACATCTCTGGGCCACGCTGGTTTCCCCTACTCTCCATGGTGTTGGGATTGAAGTCTGTCTGCCTTTACTCCTGAGAAGCTTAG--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3595714 113 - 14941987 AGCTGTCCAAGCAAGAGGAGAGCCAGAGTGACAGCTCTGGGCCACGCCAGTTTCCCCTAGTCTCCATGGTGTTGGGATTGAAGTCTGTCTGCCTTTACTCCTGAGAAGCTTAG--- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112299713 95 - 122678785 TGCTCTCCAGG----AGGACGGCGAGAGTGACAGCT-----------TGGTGCCCCATCCTCTTCCACACACTG-----AAGGTGGGTCAGCCTTCAACACACCTGAGCTCGG-TT i canFam3.chr1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260203 112 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=1072035.000000 s hg38.chr18_GL383571v1_alt 129294 108 + 198278 CCCCCCAttcttttctctgga---tttctttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA--A-AAACTACACTAAACACTTTCCAAGTAGGTAG s panTro5.chr18 65039313 119 + 78221452 CCCCCCATTCTTTTCTCTGGA---TTTCtttcccttttctcttttccttttgccttcccttttctctGAAGAaacaacaacaacaacaaa--a-aaactacaCTAAACACTTTCCAAGTAGGTAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158415 108 + 77229886 CCCCCCAttcttttctctgga---tttctttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA--A-AAACTACACTAAACACTTTCCAAGTAGGTAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5377930 115 + 17472758 CCCCCCAttcttttctctgga---tttctttcccttttctcttttccttttgccttcccttttcTTTGaagaaacaa--acaaaaa--aa--a-aaactacactaaacaCTTTCCAAGTAGGTAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418360 109 - 152096393 CCCCCCAttcttttctctgga---tttctttcccttttctcttttccgtttgccttcccttttctttGAAGAAACAA-----------AA-CA-AAACTACACTAAACACTTTCCAAGTAGGTAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368425 112 + 70235451 CCCCCCATTCTTTTCTCTGGATTTTTTttttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63059824 112 - 75711847 CCCCCCAttcttttctctggattttttttttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619042 111 - 18804593 CCCCCCATtcttttctctgga-tttttttttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230527 110 + 18905526 CCCCCCAttcttttctctgga--ttttttttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059130 109 - 72318688 CCCTCCATtcttttctctgta---cttttttcccttttctcttttccttttgccttccctcttCTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396504 110 - 1517660 CCCCCCAttcttttctctgga--ttttttttcccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3492998 109 + 6513552 CCCCCCATTCTTTTCTCTGGA---TTTtttccccttttctcttttccttttgccttcccttttcTTTGAAGAAACAA-----------AA-CA-AAGCAAAACAAAACCCTTTCCACGTAGGTAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105259395 99 + 117903854 ---tctgttcttttctc--tg---tttctttcccttttctcttttcctttttccttcccttttctGTGAAT----------------AAA-CA-AAACAACACTGAACACTTTCCACGTAGGTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19448472 116 - 31320352 ---TCTGTTCTTTTCTCTGTG---TCTCTTTCCCTTTTCTCGTTTCCTTTTGGCTTCCCTTTTCTGTGAAGAAATGA-AACAATACAAAA-CA-AAACAACACTGAACACTTTCCACGTAGGTAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1644071 116 + 2203405 ---tctgttcttttctctgtg---tttctttcccttttctcttttccttttgccttcccttttcTGTGAAGaaacaa-aacaatacaaaa-ca-aaacaacactaaacaCTTTCCACGTAGGTAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3595827 116 - 14941987 ---tctgttcttttctctgtg---tttctttcccttttctcttttccttttgccttcccttttctGTGAAGaaacaa-aacaatacaaaa-ca-aagcaacactaagcaCTTTCCACGTAGGTAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1260315 110 - 1406956 CCCTCCATtcttttctcttgg---tttctctctcttttctcttttcattttgcatttccttttctGTGAGGAAACAA-----------AACCA-AACCAACACTAAACACTTTCCAGGTAGGTAG i proCoq1.NW_012148742v1 I 112 I 718 s canFam3.chr1 112299808 106 - 122678785 --CTCCATTCTTGCCTCTTGG-----ACCCTCCACCTCCTCTCTTCCTTTTCCTTTCCCCTCTCTGTCAGGGAACAA-----------AA-CAGGAATCCTACTGAGGACACTTGGCACAGGTGC i canFam3.chr1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=807440.000000 s hg38.chr18_GL383571v1_alt 129402 80 + 198278 GCAGCAGTTTGAATCTATGTTTGAAAGGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCCTTTTTCAGCTT s panTro5.chr18 65039432 80 + 78221452 GCAGCAGTTTGAATCTATGTTTGAAAGGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158523 80 + 77229886 GCAGCAGTTTGAATCTATGTTTGAAAGGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378045 80 + 17472758 GCAGCAGTTTGAATCTATGTTTGAAAGGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCAGCTTTCATTTTTCAGCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418469 80 - 152096393 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368537 80 + 70235451 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCGGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63059936 80 - 75711847 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCGGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619153 80 - 18804593 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCGGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230637 80 + 18905526 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCGGGCAGTATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059239 80 - 72318688 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCGGGCAGCATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTCAGCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396614 80 - 1517660 GCAGCAGTTTGAGTCTATGTTTGAAAGGGAAGCGGGCAGTATAGAAAGCCACACAAGAAGCAGCCTTCATTTTTAAGCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493107 80 + 6513552 GCAGCAGTTTGAGTCTACGTTTGAAAGGGAAGCGGGCAGCATATGAAGCCACACATGCAGCAGCCTTCATTTTTCAACTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105259494 80 + 117903854 GCAGCAGTTTGAGTCAAAGTTTGCAAAGGAAGCAGGCATAATAGATAGCCACACAAGAAGCATCCTTCATTACTCAActt i calJac3.chr13 C 0 I 924 s saiBol1.JH378121 19448588 80 - 31320352 GCAGCAGTTTGAGTCTAAGTTTGCAAAGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCATCCTTCATTTCTCAGGTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1644187 80 + 2203405 GCAGCAGTTTGAGTCTAAGTTTGCAAAGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCATCCTTCATTTCTCAGCTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3595943 80 - 14941987 GCAGCAGTTTGAGTCTAAGTTTGCAAAGGAAGCAGGCAGCATAGAAAGCCACACAAGAAGCATCCTTCATTTCTCAGCTT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112299914 68 - 122678785 GCAGCCTCGTGAGTGTGCGTTGCAACCGGAGGGGAGT-------GAAGCCACGCA-----CCTGCTATGTTTCTTGGCTG i canFam3.chr1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=749186.000000 s hg38.chr18_GL383571v1_alt 129482 92 + 198278 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTTTCATGACCATGTTGATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA s panTro5.chr18 65039512 92 + 78221452 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTTTCATGACCATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158603 92 + 77229886 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTTTCATGACCATGTTGATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378125 92 + 17472758 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTTTCATGACCATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418549 92 - 152096393 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTTTTATGACCATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368617 92 + 70235451 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATAATGACAATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060016 92 - 75711847 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATAATGACAATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619233 92 - 18804593 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATAATGACAATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230717 92 + 18905526 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATCATGACAGTGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059319 92 - 72318688 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATCATGACAATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396694 92 - 1517660 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATCATGACAATGTTCATATTAATCATAATAGCTTA----CTATTAAAATGCAGCTGTCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493187 92 + 6513552 CTCAAGTTTAACTAA---AAATGTTTGAGGAGAAATTGTATCATGACAATGTTCATATTAATCACAATAGCTTA----CTATTAAAATGCAGCTGTCTA i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19448668 85 - 31320352 CTCAAGTTTAACTAA---AACCTTTTGA-GAGAAATCGTTTCATGACCATGTTCATATT------AATAGCTTA----CTATTAAAATGCAACTGTCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1644267 84 + 2203405 CTCAAGCTTAACTAA---AAACTTTTGA-GAGAAATCGTTTCATGACGAT-TTCATATT------AATAGCTTA----CTATTAAAATGCAACTGTCTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3596023 85 - 14941987 CTCAAGTTTAAATAA---AAACTTCTGA-GATAAATCGTTTCATGACCATGTTCATATT------AATAGCTTA----CTATTAAAATGCAACTGTCTA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112299982 87 - 122678785 -TTCCACATAACCGATTTTTCTTTTTCAGAGGAA----TGTCTCGACTATGTTAGTACTACT---AATAATTCAAAATCTATTAAA---CATCTGTTA- i canFam3.chr1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e calJac3.chr13 105259574 924 + 117903854 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=146945.000000 s hg38.chr18_GL383571v1_alt 129574 15 + 198278 TATTATGGAATAGTG--- s panTro5.chr18 65039604 15 + 78221452 TATTATGGAATAGTG--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158695 15 + 77229886 TATTATGGAATAGTG--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378217 15 + 17472758 TATTATGGAATAGTG--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418641 15 - 152096393 TATTATGGTATAGTG--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368709 15 + 70235451 TATTATGGAATAGTG--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060108 15 - 75711847 TATTATGGAATAGTG--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619325 15 - 18804593 TATTATGGAATAGTG--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230809 15 + 18905526 TATTATGGAATAGTG--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059411 15 - 72318688 TATTATGGAATAGTA--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396786 15 - 1517660 TATTATGGAATAGTG--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493279 15 + 6513552 TATTATGGAATAGTG--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105260498 13 + 117903854 TATTAC--AATAGGA--- i calJac3.chr13 I 924 C 0 s saiBol1.JH378121 19448753 15 - 31320352 TATTATGGAATAGTG--- i saiBol1.JH378121 C 0 I 666 s cebCap1.NW_016107689v1 1644351 15 + 2203405 TATTATGGAATAGTG--- i cebCap1.NW_016107689v1 C 0 I 670 s aotNan1.NW_018502140v1 3596108 15 - 14941987 TATTATGGAACAGTG--- i aotNan1.NW_018502140v1 C 0 I 670 s canFam3.chr1 112300069 18 - 122678785 TATTATGAAATGCAGATA i canFam3.chr1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=2305515.000000 s hg38.chr18_GL383571v1_alt 129589 223 + 198278 TATGACATTTACTTCATCTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGtaggcaactccaagtaatgtgc-ctgatgcctccatttccacatttctaaaatgaaaatgacagtaatattgcactccattttaaTATCCATATTATTGGCTGTATTTGGATATGGTGGCAAAAGTGCCCTAAATTActc-------ccagtaaattcctcaaattcctgacagtgg s panTro5.chr18 65039619 223 + 78221452 TATGACATTTACTTCGTCTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCAACTCCAAGTAATGTGC-CTGATGCCTCCATTTCCACATTTCTAAAATGAAAATGACAGTAATATTGcactccattttaatatccatattattggctgtatttggatatggtggccaaagtgccctaaattactc-------ccagtaaattcctcaaattcctgacaatgg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158710 223 + 77229886 TATGACATTTACTTCATCTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGtaggcaactccaagtaatgtgc-ctgatgcctccatttccacatttctaaaatgaaaatgacagtaatattgcactccattttaaTATCCATATTATTGGCTGTATTTGGATATGGTGGCCAAAGTGCCCTAAATTActc-------ccagtaaattcctcaaattcctgacagtgg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378232 223 + 17472758 TATGACATTTACTTCATCTTACAACGAGGTTTTAAAGAAATTTGGAGTATGTAGtaggcaactccaagtaatgtgc-ctgatgcctccatttccacatttctaaaatgaaaatgacagtaatattgcactccattttaaTATCCATATTATTGGCTGTATTTGGATATGGTGGCCAAAGTGCCCTAAATTActc-------ccagtaaattcctcaaattcctgacagtgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418656 223 - 152096393 TATGACGTTTACTTCATCTTACAACGAGGTTTTAAAGAAATTTGGAGTATGTAGtaggcaactccaagtaatgtgc-ctgatgcctccatttccacatttctaaaatgaaaatgacagtaataTTGCACTCCATTTTAATATCCATATTATTGGCTTTATTTGGATATGGTGGCCAAAGTGCCCTAAATTAGTT-------ccagtaaattcctcgaattcctgacggtgg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368724 222 + 70235451 TATGACGTTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCACCTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGTAATATTGCACTCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTGGCCAAAGTGCCCTAAATTAGTC-------CCAGTAAATTCCTCAAATTCCTGACGGTGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060123 222 - 75711847 TATGACGTTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCACCTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGTAATATTGCACTCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTGGCCAAAGTGCCCTAAATTAGTC-------CCAGTAAATTCCTCAAATTCCTGACGGTGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619340 222 - 18804593 TATGACGTTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCACCTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGTAATATTGCACTCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTGGCCAAAGTGCCCTAAATTAGTC-------CCAGTAAATTCCTCAAATTCCTGACGGTGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13230824 222 + 18905526 TATGACGTTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCACCTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGTAATATTGCACTCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTGGCcaaagtgccctaaattagtc-------ccagtaaattcctcaaattcctgacggtgg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059426 222 - 72318688 TATGACGCTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCACCTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGAAATATTGCACTCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTGGCcaaagtgccctaaattagtc-------ccagtaaattcctcaaattcctgacggtgg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 396801 222 - 1517660 TATGACGTTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCACCTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGTAATATTGCACTCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTggccaaagtgccctaaattagtc-------ccagtaaattcctcaaattcctgacggtgg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493294 222 + 6513552 TATGATGTTTACTTCATTTTACAATGAGGTTTTAAAGAAATTTGGAGTATGTAGTAGGCAACTCCAAGTAATGTGC-CTCATGCCTCCATTTCCAGATTTCTAAAATGAAAATAACAGTAATATTGCAATCCATTTT-ATATCCATATTATTGGCTTTATTTGGATATGGTGGCcaaagtgccctaaattagtc-------ccagtaaattcttcaaattcctgacggtgg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105260511 219 + 117903854 TATGACATTTACTTCATTTTACAATGAGGCTTT----AAATTTGGAGTATGCGGTAGGCAACTTCAAGTAATGTGC-CTCATGTCTCCATTTTCACATTTCCAAAACGAAAATAATAGTAATATTACACTCCATTTAAATATCCATATTATTGGCTTTATTTGAATATGGTGGTCTAAGTGCCCTAAATTAGTC-------CAGGTAAATTCCTCTAATTCCTGATGGTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19449434 219 - 31320352 TATGACATTTACTTCATTTTACAACGAGGCTTT----AAATTTGGAGTATGCGGTAGGCAACTCCAAGTCATGTGC-CTCATGTCTCCATTTTCACATTTCCAAAACGAAAATAATAGTAATATTACACTTTATTTTAATATCCATATTATTGACTTTATTTGGATATGGTGGTCTAAGTGCCCTAAATTAGTC-------CCGGTAAATTCCTCAAATTCCTGATGGTGA i saiBol1.JH378121 I 666 C 0 s cebCap1.NW_016107689v1 1645036 219 + 2203405 TATGACATTTACTTCATTTTACAATGAGGCTTT----AAATTTGGAGTATGCGGTAGGCAACTCCAAGTAATGTGC-CTCATGTCTCCATTTTCACATTTCCAAAACAAAAATTATAGTAATACTACACTCCATTTTAATATCCGTATTATTGGCTTTATTTGGATATGGTGATCTAAGTGCCCTAAATTAGTC-------CAGGTAAATTCCTCGAATTCCTGATGGTGA i cebCap1.NW_016107689v1 I 670 C 0 s aotNan1.NW_018502140v1 3596793 216 - 14941987 TATGACATTTACTTCATTTTACAATGAGGCTTT----AAATTTGGAGTATGCAGTAGGCAACTCCAAGTAATGTGC-C---TGTCTCCATTTTCACATTTCCAAAATGAAAATAATAGGAATATTACACTCCATTTTAATATCCATATTACTGGTTTTATTTGGATATGGTGGTCTAAGTGCCCTAAATTAGTC-------CAGGTAAATTCCTCAAATTCCTGATGGTGG i aotNan1.NW_018502140v1 I 670 C 0 s canFam3.chr1 112300087 226 - 122678785 TATGACATTTACTTC-TCTTACA---GGGCTTTGAAGAAATTTGGGGGCCACAGTAGGAAACCCCAAGTAATCCTCTCCCATGACTTCATTTCCCCATTTCCCAAATGTGGAT-ATAATAGCTTCACACTGCGTTTTTATATCCATATTTTGTCCTTTATTCAGATGTGGTGGTTCAAATGCCCTAAATTGACCTCCACCTCTGAAAGGTTGCCCCAAATTCGGAAAGTGG i canFam3.chr1 C 0 I 2625 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=717577.000000 s hg38.chr18_GL383571v1_alt 129812 77 + 198278 tttcatgtgttctccttactcatccctcacccccttcctagcctgcatcttcacctgactgcctcagtgctgcatcc s panTro5.chr18 65039842 77 + 78221452 tttcatgtgttctccttactcatccctcacccccttcctagcctgcatcttcacctgactgcctcagtgctgcatcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64158933 77 + 77229886 tttcatgtgttctccttactcatccctcacccccttcctagcctgcatcttcacctgactgcctcagtgctgcatcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378455 77 + 17472758 tttcatgtgttctccttactcatccctcacccgcttcctagcctgcatcttcacctgactgcctcagtgctgcatcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418879 77 - 152096393 tttcatatgttctccttactcatccctcacccccttcctagcctgcgtcttcacctgactgcctcagtgctgcatcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57368946 77 + 70235451 TTTCATGTGTTCTCCTTACTCATCCCTCACCCCCTTCCTCGCCTGCGTCTTCACCAGAATGCCTCAGTGTTGCATCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060345 77 - 75711847 TTTCATGTGTTCTCCTTACTCATCCCTCACCCCCTTCCTCGCCTGCGTCTTCACCAGAATGCCTCAGTGTTGCATCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619562 77 - 18804593 CTTCATGTGTTCTCCTTACTCATCCCTCACCCCCTTCCTCGCCTGCGTCTTCACCAGAATGCCTCAGTGTTGCATCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231046 77 + 18905526 tttcatgtgttctccttactcatccctcacccccttcctcgcctgcgtcttcaccagaatgcctcagtgttgcatcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059648 74 - 72318688 tttcatgtgtt---cttactcatccctcacccccttcctcgcctgcgtcttcaccagaatgcctccgtgttgcatcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397023 77 - 1517660 tttcatgtgttctccttactcatccctcacccccttcctcaactgcgtcttcaccagaatgcctcagtgttgcatcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493516 77 + 6513552 tttcatgtgttctccttactcatcccacacccctttcctcgcctgcgtcttcaccagaatgcctcagtgttgcatcc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105260730 75 + 117903854 TTTCACGTGTTCTCCTTACTCATCCCTCACCCGCTTTCTCACCT--GTCTTTACCAGACTGTCTCAGTGCTACCACC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19449653 75 - 31320352 TTTCACGTGTTCTCCTT--TCATCCCTCATCCCCTTTCTCACCTGCGTCTTTACCAGACTGTCTCAGTGCTACATCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1645255 75 + 2203405 TTTCACATGTTCTCCTT--TCATCCCTCATCCCCTTTCTCACCTGTGTCTTTACCAGACTGTCTCAGTGCTACATCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3597009 77 - 14941987 TTTCACGTGTTCTCCTTACTCATCCCTCACCCGCTTTCTCACCTGTGTCTTTACCAGACTGTCTCAGTGCTACATCC i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 472877 1939 - 2150887 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=2132238.000000 s hg38.chr18_GL383571v1_alt 129889 224 + 198278 gctgctgaccactttaggg--attgccgctgtgctagggacactgtctgtcgcatgctgaccactgagacacccctgcttcatcttcaggcagagcacacg---actactccacctttggaacacaggcaggtcccccttcgttcctcaaagcacaacggtaccctggacagaactttaacaagattatactgaaggtttgtgggaaaagaaaaggaaACCAGCCTCAG s panTro5.chr18 65039919 224 + 78221452 gctgctgaccactttaggg--attgccgctgtgctagggaccctgtctgtcgcatgctgaccactgagacgcccctgcttcatcttcaggcagagcacacg---actactccacctttggaacacgggcaggtcccccttcgttcctcaaagcacaacggtaccctggacagaactttaacaagattatactgaaggtttgtgggaaaagaaagggaaACCAGCCTCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159010 224 + 77229886 gctgctgaccactttaggg--attgccgctgtgctagggacactgtctgttgcatgctgacgactgagacgcccctgcttcatcttcaggcagagcacacg---actactccacctttggaacacgggcaggtcccccttcgttcctcaaagtacaacggtaccctggacagaactttaacaagattatactgaaggtttgtgggaaaagaaagggaaACCAGCCTCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378532 224 + 17472758 gctgctgaccactttaggg--attgccgctgtgctagggacactgtctgtcgcatgctgaccactgagacgtccctgcttcatcttcaggcagagcacaca---actactccacctttggaacacgggcaggtcccccttcattcctcaaagcacaacggtaccctggacagaactttaacaagattatactgaaggtttgtgggaaaagaaagggaaACCAGCCTCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139418956 217 - 152096393 gctgctgaccactttaggg--attgctgctgtgcta-ggacactgtc----gcatgctgaccactgagatgcccctgcttcatcttcaggcagagcacacg---actactctacc--tggaacacgggcaggtcccccttcgttcctcaaagcacaacggtaccctggacagagctttaacaagactatactgaaggtttgtgggaaaagaaagggaaACCAGCCTCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369023 223 + 70235451 CCTGCTGACCACTTTAGGAACATCGCCGATGTGCTAGGGACACTGTCTGCGGCATGCTGACCACTGAGATGCCCCTGCTTCATCTTCAGGCAGAGCACACA---ACTACTCCATC--TGGAACAGGGGCAGG-CCTCCTTCGTTCCTCAAAGCGCAATGGTACCCTGGACAGAACTTTAACAAGACTATACTGAAGGTCTGTGGGAAAAGAAAGGGAAACCAGCCTCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060422 223 - 75711847 CCTGCTGACCACTTTAGGAACATTGCCGATGTGCTAGGGACACTGTCTGCGGCATGCTGACCACTGAGATGCCCCTGCTTCATCTTCAGGCAGAGCACACA---ACTACTCCATC--TGGAACAGGGGCAGG-CCCCCTTCGTTCCTCAAAGCGCAATGGTACCCTGGACAGAACTTTAACAAGACTATACTGAAGGTCTGTGGGAAAAGAAAGGGAAACCAGCCTCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619639 223 - 18804593 CCTGCTGACCACTTTAGGAACATTGCCGATGTGCTAGGGACACTGTCTGCGGCATGCTGACCACTGAGATGCCCCTGCTTCATCTTCAGGCAGAGCACACA---ACTACTCCATC--TGGAACAGGGGcagg-cccccttcgttcctcaaagcgcaatggtaccctggacagaactttaacaagactatactgaaggtctgtgggaaaagaaagggaaACCAGCCTCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231123 223 + 18905526 cctgctgaccactttaggaacattgccgatgtgctagggacactgtctgcggcatgctgaccactgagatgcccctgcttcatcttcaggcagagcacacg---actactccatc--tggaacacgggcagg-cccccttcgttcctcaaagcgcaatggtaccctggacagaactttaacaagactatactgaaggtctgtgggaaaagaaagggaaACCAGCCTCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059722 223 - 72318688 cctgctgaccactgtaggaacattaccgctgtgctagggacactgtctgcggcatgctgaccaccgagatgcccctgcttcatcttcaggcagagcacact---actactccatc--tggaacacgagcagg-cccccttcgttcctcaaagcaccatggtaccctggacagaactttaacaagactgtactgaaggtctgtgggaaaagaaagggaaatCAGCCTCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397100 223 - 1517660 cctgctgaccactttaggaacattgccgatgtgctagggacactgtctgcggcatgctgaccactgagatgcccctgcttcatcttcaggcagagcacaca---actactccatc--tggaacacgggcagg-cccccttcgttcctcaaagcgcaatggtaccctggacagaactttaacaagactatactgaaggtctgtgggaaaagaaagggaaACCAGCCTCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493593 223 + 6513552 cctgctgaccactttaggaacactgccgctgtgctagggacactgtctgtggcatgctgaccactgagatgcccctgcttcatcttcaggcagagcacaca---actactccatc--tggaacacgggcagg-cccccttcgttcctcaaagcacaatggtaccctggacagaactttaacaagactatactgaaggtctgtgggaaaagaaagggaaACCAGCCTCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105260805 225 + 117903854 AAAGCTGACCACTTTAGGGACATTGCCACTGTACTAGGGACACTCTCTGTGGCACGTGGACCACTGAAATG-CCCTATTTTGTGTTCAAGCAGAGAACACGACTACTACTACATC--TGGAACACAAGCAGG-CCTCCTTCATTCCTCAAAGCATAATGGTACTTTGCACAGAACTTTAACAAGACCATAGCAAAGGTCTGTAGGAAAACAAACGGAAACCACCCTCAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19449728 222 - 31320352 AAAGCTGACCACTTTCGGGACATTGCCACTGTACTAGGGACACTCTCTGTGGCATGTGGACCACTGACATG-CCCTATTTTGCGTTCAGGCTGAGAACACG---ACCACTACAAC--TGGAACACAGTCAGG-CCTCCTTCATTCCTCAAAGCATAATGGTACTCTGGAGAGAACTTTAACAAGACTGTAGTGAAGGTCTGTGAGAAAACAAAGGGAAACCACCCTCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1645330 222 + 2203405 AAAGCTGACCACTTTAGGGACACTGCCACTGTACTAGGGACACTTTCTGTGGCATGTGGACCACTGATATG-CCCTATTTTGTGTTCAGACAGAGAACACG---ACTACTACATC--TGGAACACAAGCAGG-GCTCCTTCATTCCTCAAAGCATAATGGTACTTTGGACAGAACTTTAACAAGACAATAGCGAAGGTCTGTGGGAAAACAAAGGGAAACCACCCTCAG i cebCap1.NW_016107689v1 C 0 I 9 s aotNan1.NW_018502140v1 3597086 222 - 14941987 AAAGCTGACCACTTTAGGGACATTGCCATTGTACTAGGGACACTCTCTGTGGCATGTAGACCACTGAAATG-CCCTATTTTGTGTTCAGGCAGAGAACATG---ACTACTACATC--TGgaacacaagcagg-cctccttcattcctcaaagcataacggtactttggacagaactttaacaagactatagtgaaggtctgtgggaaaacaaagggaaACCACCCTCAG i aotNan1.NW_018502140v1 C 0 I 9 s dasNov3.JH575754 474816 221 - 2150887 gCTACTAACTACCTCAAGGACATCAGCACCATCCTCAGGGCACTGTCTTCAGTTTA-GGACTACTATAGTGTCCCCA-TCTGTCCTTGGGCAGACCTCGCA---gctactctacc--tgaaacatgaataggtcctccttaatcccccaaagcacaactgaatccttcactgaa-tttagcacaactatcctgaaggcctgggggaaaaggaagagaaatTAACTCCAG i dasNov3.JH575754 I 1939 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=41337.000000 s hg38.chr18_GL383571v1_alt 130113 7 + 198278 --TGTCTTA s panTro5.chr18 65040143 7 + 78221452 --TGTCTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159234 7 + 77229886 --TGTCTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378756 7 + 17472758 --TGTCTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419173 7 - 152096393 --TGTCTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369246 7 + 70235451 --TATCTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060645 7 - 75711847 --TATCTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619862 7 - 18804593 --TATCTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231346 7 + 18905526 --TATCTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059945 7 - 72318688 --TATCCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397323 7 - 1517660 --TATCTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493816 7 + 6513552 --TATCTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261030 7 + 117903854 --CATCTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19449950 7 - 31320352 --CATCTCA i saiBol1.JH378121 C 0 I 4 s dasNov3.JH575754 475037 7 - 2150887 AGTATCA-- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3597308 9 - 14941987 I e cebCap1.NW_016107689v1 1645552 9 + 2203405 I a score=759691.000000 s hg38.chr18_GL383571v1_alt 130120 123 + 198278 AAGCTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAGGTACTCCATGGCCCAACAGACCAAGGAAGTATTTTCTACAACCCTTTGAGAGGCAGGATTCGCCTTG s panTro5.chr18 65040150 123 + 78221452 AAGCTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAGGCACTCCATGGCCCAACAGACCAAGGAAGTATTTTCTACAACCCTTTGAGAGGCAGGATTCGCCTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159241 123 + 77229886 AAGCTGAGACCTTTCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGATATCTTCAGAGGTACTCCATGGCCCAACAGACCAAGGAAGTATTTTCTACAACCCTTTGAGAGGcaggattcgccttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378763 123 + 17472758 AAGCTGAGAACTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAGGCACTCCATGGCCCAACAGACCGAGAAAGTATTTTCTACAACCCTTTGAGAGGcaggattcgccttg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419180 123 - 152096393 AAGCTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAGGCACTCCATGGCCCAACAGACCTAGGAAGTATTTTCTACAACCCTTTGAGAGGCGGGATTCACCTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369253 123 + 70235451 AAGCTGAGACCTTTCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAAGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTATAACCCTTTGAGAGGcaggattcgccttc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060652 123 - 75711847 AAGCTGAGACCTTTCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAAGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTATAACCCTTTGAGAGGCAGGATTCGCCTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619869 123 - 18804593 AAGCTGAGACCTTTCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAAGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTATAACCCTTTGAGAGGcaggattcgccttc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231353 123 + 18905526 AAGCTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAAGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTATAACCCTTTAAGAGGcaggattcgccttc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60059952 123 - 72318688 AAGCTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAAGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTACAACCCTTTGAGAGGCAGGATTCGCCTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397330 123 - 1517660 AAGCTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGACATCTTCAGAAGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTATAACCCTTTGAGAGGcaggattcgccttc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493823 123 + 6513552 AAGTTGAGACCTTCCTCAGAGCCAG---------------------------------CTGCTTAAGGAATGTGCAGGCATCTTCAGAGGCACTCCACGGCCCAACAGGCCTAGGAAGTATTTTCTACAACCCTTTGAGAGGCAGGATTCGCCTTG i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 475044 145 - 2150887 GATCTGATGCCTGCCTCTGAGCTAGCCTGACTCAAGTTGGACAGGAGGCAGCTTGTTACTGATTGGTGATGGTTCAGACTTCTCCAGGGGCACTTCATGGCCCAATACAATGAGGAAGTGTTTTCTAC-----------ATGTaggattcaccaat i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e calJac3.chr13 105261037 0 + 117903854 C e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3597308 9 - 14941987 I e cebCap1.NW_016107689v1 1645552 9 + 2203405 I e saiBol1.JH378121 19449957 4 - 31320352 I a score=9576.000000 s hg38.chr18_GL383571v1_alt 130243 2 + 198278 TC s panTro5.chr18 65040273 2 + 78221452 TC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159364 2 + 77229886 tc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378886 2 + 17472758 tc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419303 2 - 152096393 TT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369376 2 + 70235451 tt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060775 2 - 75711847 TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619992 2 - 18804593 tt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231476 2 + 18905526 tt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060075 2 - 72318688 TT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397453 2 - 1517660 tt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493946 2 + 6513552 CT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261037 2 + 117903854 TT i calJac3.chr13 C 0 C 0 s dasNov3.JH575754 475189 2 - 2150887 tc i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3597308 9 - 14941987 I e cebCap1.NW_016107689v1 1645552 9 + 2203405 I e saiBol1.JH378121 19449957 4 - 31320352 I a score=31243.000000 s hg38.chr18_GL383571v1_alt 130245 3 + 198278 CCA s panTro5.chr18 65040275 3 + 78221452 CCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159366 3 + 77229886 cca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378888 3 + 17472758 cca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419305 3 - 152096393 CCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369378 3 + 70235451 cca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060777 3 - 75711847 CCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619994 3 - 18804593 cca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231478 3 + 18905526 cca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060077 3 - 72318688 CCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397455 3 - 1517660 cca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493948 3 + 6513552 CTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261039 3 + 117903854 CCA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1645561 3 + 2203405 CCA i cebCap1.NW_016107689v1 I 9 C 0 s aotNan1.NW_018502140v1 3597317 3 - 14941987 CCA i aotNan1.NW_018502140v1 I 9 C 0 s dasNov3.JH575754 475191 3 - 2150887 cta i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e saiBol1.JH378121 19449957 4 - 31320352 I a score=3919803.000000 s hg38.chr18_GL383571v1_alt 130248 398 + 198278 GGTTGATTAAAAATGGAAACAAACATTCCCTCAAGTAGAGAGCCTCAGAGTGACACAATTGCATAACAGAGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTCCGGTATGCC--CTTTCCCAGAGATCTAAAGTCCACATTGCCTCTAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAAACAATGGTGTTCAAATGAAGTTTTAGGAAAAGGAGATTTTTCAATAGGAAATAATTCATAGTGTGATTATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAACTAGAAGCTTATTTTTGAGGGCTATTGTCCTTCACTTAAGTCTGTCC s panTro5.chr18 65040278 398 + 78221452 GGTTGATTAAAAATGGAAACAAACATTCCCTCAAGTAGAGAGCCTCAGAGTGACACAATTGCATAACAGAGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTCCGGTATGCC--CTTTCCCAGAGATCTAAAGTCCACATCGCCTCTAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAAACAATGGTGTTCAAATGAAGTTTTAGGAAAAGGAGATTTTTCAATAGGAAATAATTCATAGTGTGATTATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAACTAGAAGCTTATTTTTGAGGGCTATTGTCCTTCACTTAAGTCTGTCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159369 398 + 77229886 ggttgattaaaaatggaaacaaacattccctcaagtagagagcctcaGAGTGACACAATTGCATAACAGAGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTCCGGTATGCC--CTTTCCCAGAGATCTAAAGTCCACATCGCCTCTAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAAACAATGGTGTTCAAATGAAGTTTTAGGAAAAGGAGATTTTTCAATAGGAAATAATTCATAGTGTGATTATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAACTAGAAGCTTATTTTTGAGGGCTATTTTCCTTCACTTAAGTCTGTCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5378891 398 + 17472758 ggttgattaaaaatggaaacaaacattccctcaagtagagagcctcaGAGTGACACAATTGCATAACAGGGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTCCGGTATGCC--CTTTCCCAGAGATCTAAAGTCCACATCGCCTCTAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAAACAATGGTGTTCAAATGAAGTTTTAGGAAAAGGAGATTTTTCAATAGGAAATAATTCATAGTGTGATTATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAACTAGAAGCTTATTTTTGAGGGCTATTGTCCTTCACTTAAGTCTGTCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419308 398 - 152096393 GGTTGATTAAAAATGGAAACAAACATTCCCTCAAGTAGAGAGCCTCAGAGTGACACAATTGCGTAACAGACAGGCCC----AAGTCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTCCAGTATGCC--CTTTCCC-GAGATCTAAAGTCCACATTGCCTCTAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAAACAATGGTGTTCAAATGAAGTTTTAGGAAAAAGAAATTTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGCTGAAAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAACTAGAAGTTTATTTTTGAGGGCTATTGTCCTTCACTTAAGTCTGTCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369381 397 + 70235451 ggttgattaaaaatgtaaacaagcattccctcaagtagagagcctcaGAGCGACACACTTTCATAACAGAGAGGACC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTCGGTATGCC--CTTTCCTGGAGACCTAAAGTCCACATTGCCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAGACAACGGTGTTCAAATGAAGTTTTA-GAAAAAGAAATTTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGTTG-AAAAAAATAAATGC---------------TGGTCA--TGTTATAAAGAGAAGACAGAATCACAATTAGAAGTTTATTTTTTAGGACTATTTTCCTTCACTTAAGTCTATCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63060780 397 - 75711847 GGTTGATTAAAAATGTAAACAAGCATTCCCTCAAGTAGAGAGCCTCAGAGTGACACACTTTCATAACAGAGAGGACC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTCGGTATGCC--CTTTCCTGGAGACCTAAAGTCCACATTGCCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAGACAACGGTGTTCAAACGAAGTTTTA-GAAAAAGAAATTTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGTTG-AAAAAAATAAATGC---------------TGGTCA--TGTTATAAAGAGAAGACAGAACCACAATTAGAAGTTTATTTTTTAGGGCTATTTTCCTTCACTTAAGTCTATCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13619997 397 - 18804593 ggttgattaaaaatgtaaacaagcattccctcaagtagagagcctcaGAGTGACACACTTTCATAACAGAGAGGACC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTCGGTATGCC--CTTTCCTGGAGACCTAAAGTCCACATTGCCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAGACAACGGTGTTCAAACGAAGTTTTA-GAAAAAGAAATTTCTCAATAGGAAATAATTCACAGTGTGATCATTCTGTTG-AAAAAAATAAATGC---------------TGGTCA--TGTTATAAAGAGAAGACAGAATCACAATTAGAAGTTTATTTTTTAGGGCTATTTTCCTTCACTTAAGTCTATCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231481 397 + 18905526 ggttgattaaaaatgtaaacaagcattccctcaagtagagagcctcaGAGTGACACACTTTCATAACAGAGAGACCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTCAGTATGCC--CTTTCCCGGAGACCTAAAGTCCACATTACCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAGACAACGGTGTTCAAACGAAGTTTTA-GAAAAAGAAATTTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGTTG-AAAAAAATAAATGC---------------TGGTCA--TGTTATAAAGAGAAGACAGAATCACAATTAGAAGTTTATTTTTGAGGGCTATTTTCCTTCACTTAAGTCTATCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060080 397 - 72318688 GGTTGATTAAAAATGTAAACAAGCATTCCCTCAAGTAGAGGGCCTCAGAGTGACACACTTTCATAACAGAGAGGCCC----GAGCCCCTGACACACAGACACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTTGGTATGCC--CTTTCCCCGAGACCTAAAGTCCACCTTGCCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTGTGTAGAAACAACGGTGTTCAAATGAAGTTTTA-GAAAAAGAAATTTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAATTAGAAGTTTATTTTTGAGGGCTATTTTCCTTCACTTAAGTCTATCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397458 396 - 1517660 ggttgattaaaaatgtaaacaagcattccctcaagtagagagcctcaGAGTGACACACTTTCATAACAGAGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTCGGTATGCC--CTTTCCCGGAGACCTAAAGTCCACATTGCCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTATGTAGAGACAACGGTGTTCAAACGAAGTTTTA-GAAAAAGAAATTTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGTTG-AAAACAATAAATGC---------------TGGTCA--TGTTATAAAGAGAAGACAGAATCACAATTAGAAGTTTATTTTTGA-GGCTATTTTCCTTCACTTGAGTCTATCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3493951 399 + 6513552 GGTTGATTAAAAATGTAAACAAGCATTCCCTCAAGTAGACAGCCTCAGAGTGACACACTTTCATAACAGAGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACAACACTTATCTGTCACAAAGGCCAGTAAAATCCTTTGGTAAGCCCTCTTTCCCGGAGACCTAAAGTCCACATTGCCTCCAAAGAAGAG-TTGCATGAAAACAAAGAGAAGTGTGTAGGAACAACGGTGTTCAAACGAAGCTTTA-GAAAAAGGTATGTCTCAATAGGAAATAATTCATAGTGTGATCATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAAAGAGAAGACAGAATCACAATTAGAAGTTTATTTTTGAGGGCTATTTTCCTTCACTTAAGTCTATCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261042 380 + 117903854 GATTGATTAAAAATGGAAACAAACATTTCCTCAAGTAGAGAACCTCAGAGTGATACATTTTCATAACAGAGAGGCCC----AAGGCCCTGAAACACAGCCACCAAATATTCTGACCACACTTATGTGTCACAAAGAC---------CTTCAGGT--GCC--CTTTCCCAGAGACCTAAAGTCCACATCACCTCTAAAGAAGAG-TTCCATGAAAAC--AGAGAAGTATGTAGAAACAACAATGTTCAAATGAAGTCTTAGAAAAAAGAAATTTCTCAATTAGAAAT-----ATAGCGTGATCATTCTGCTG-AAAAAACTAAATCC---------------TAGTCA--TGTTATAAAGAGAAGGCAGAATCACAACTAAAAGTTTATTTTTGAGGACTATTTTCCTTCATTTAATTCTATCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19449961 387 - 31320352 GGATGATTAAAAATAGAAACAAACATTTCCTCAAGTAGAGAGCCTCAGAGTGATATATTTGCATAACAGAGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACCACACTTATTTGTCACAAAGACCAGTAATATCCTCAGGT--GCC--CTTTCCCAGAGACCTAAAGTCCACATCACCTCTAAAGAAGAG-TTGCATGGAAAC--AGAGACGTATGTAGA---AACAATGTTCAAATGAAGTTTTAGAAAAAAGACATTTTTCGATTAGAAAT-----ATAATGTGATCATTCTGCTGAAAAAAAATAAATGC---------------TAGTCA--TGCTATAAAGAGAAGGCAGAATCACAACTAGAAGTTTATTTTAGAGGGCTATTTTCCTTCACTTAATTCTATCT i saiBol1.JH378121 I 4 C 0 s cebCap1.NW_016107689v1 1645564 386 + 2203405 GGATGATTAAAAATGGAAACAAACATTTCCTCAAGTAGAGACCCTCAGAGTGATATATTTGCATAACAGGGAGGCCC----AAGCCCCTGACACACAGCCACCAAATATTCTGACCACACTTATTTGTCACAAAGACCAGTAATATCCTCAGGT--GCC--CTTTCCCAGAGACCTAAAGTCCACATCACCTCTAAAGAAGAGTTTGCATGGAAAC--AGAGAAGTATGTAGA---AACAATGTTCAAATGAAGTTTTAGAAAAAAGAAATTTCTCAATTAGAAAT-----ATAGTGTGATCATTCTGCTG-AAAAAAATAAATGC---------------TAGTCA--TGTTATAGAGACAAGGCAGAATCACAACTAGAAGTTTATTTT-GCGGGCTATTTTCCTTCACTTAATTCTATCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3597320 388 - 14941987 GGATGATTAAAAATGGAAACAAACATTTCCTCAAGTAGAGAGCCTCGGAGTGATATATTTGCATAACAGAGAGGCCCAACAAAGCCCCTGACACACAGCCACCAAATATTCTGACCACACTTATCTGTCACAAAGACCAGTAGTATCCTCAGGT--GCC--CCTTCCCAGAGACCTAAAGTCCACATCGCCTCTAAAGAAGAG-TTGCATGAAAAC--AGAG----ATGTAGAAAGAACAATGTTCAAAT-AAGTTTTAGAAAAAAGAAATTTCTCAATTAGAAAT-----ATAGTGTGATCATTCTGCTG-AAAAAAATGAATGC---------------TAGTCA--TGTTATAAAGAGAAGGCAGAATCCCAACTAGAAGTTTATTTTTGAGGGCTATTTTCCTTCACTTAATTCTATCT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 475194 357 - 2150887 ggatgattaaaaatgaaagcaagcattacctccagaagagagcctctccctgacAACCTAACATAATGGTGAGG-CC----AAGGCCCTGAAACA-------AAAACTTTCTG---------------------------------CCTTCTTT-------TTTCACCAGAGAGTTACATTCCAGATCACC---AATGAATAA-ATGTAGAAAAATAAA---ACACATGTATTAACAGGGAAGTTTAAATGAATTTTAA-GAAAAATAAATTTCTCTTTTGGAAATAATTTTCAGTGGGGTCATTCTACTG-GaaaaaatataagtatttttataaaaatgtaattatttgttatataGAGAAGACAGTATCACAGTTACAGGCTTCTCTTTTAGGATTATTTTCCTTCATTTAAGTC----- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111834461 3699 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=1059795.000000 s hg38.chr18_GL383571v1_alt 130646 124 + 198278 TCAAATGTATGCATAGGTA-----TTTGTTCGATTTTATTT---TTAAAT------AATATAGAAAATGAAA-TA-----TTTATGAAATATCTGATATTAAATAAAACATCAATGTAT---GAAATACTTATA-AAATATA--TATATA s panTro5.chr18 65040676 126 + 78221452 TCAAATTTGTGCATAGGTA-----TTTGTTCGATTTTATTT---Ttaaat------aatatagaaaatgaaa-ta-----tttatgaaatatctgatattaaataaaacatcaatgtat---gaaatatttata-aaatatacatataTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159767 124 + 77229886 TCAAATTTATGCATAGGTA-----TTTGTTCAATTTTATTT---TTAAAT------AACATAGAAAATGAAA-TA-----TTTATGAAATATCTGATATTAAATAAAACATCAATGTAT---GAAATATTTATA-AAATATA--TATATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379289 130 + 17472758 TCAAATTTATGCATAGGTA-TTTGTTTGTTCGATTTTATTT---TTAAAT------AATATAGAAAATGAAA-TA-----TTTATGAAATATCTGATATTAAATAAAACATCAATGTAT---GAAATATTTATA-AAGTATATATATATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419706 124 - 152096393 TCAAATTTATGCATAGCTA-----TTTGTTCGATTTTATTT---TTAAAT------aatatagaaaatgaaa-ta-----tttatgaaatatttgatattaaataaaacatcaatgtat---gaaatGTTTATA-AAATATA--TATATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369778 133 + 70235451 TCAAATTTATGCATAGGTA-TTTGTTTGTTCGATTTTATTT---ttaaata-agaaaatatagaaaatgaaa-ta-----tttatgaaatatttgatattaaataAGACATCAATGTGT---GAAATGTTTATA-AAATATA--TACATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061177 133 - 75711847 TCAAATTTATGCATAGGTA-TTTGTTTGTTCGATTTTATTT---TTaaata-agaaaatatagaaaatgaaa-ta-----tttatgaaatatttgatattaaataagacatCAATGTGT---GAAATGTTTATA-AAATATA--TACATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13620394 133 - 18804593 TCAAATTTATGCATAGGTA-TTTGTTTGTTCGATTTTATTT---TTaaata-agaaaatatagaaaatgaaa-ta-----tttatgaaatatttgatattaaataagacatCAATGTGT---GAAATGTTTATA-AAATATA--TACATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13231878 128 + 18905526 TCAAATTTATGCATAGGTA-TTTGTTTGTTCGATTTTATTT---ttaaat------aatatagaaaatgaaa-ta-----tttatgaaatatttgatattaaataAGACATCAATGTAT---GAAATGTTTATA-AAATATA--TACATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060477 129 - 72318688 TCAAATTTATGCATAGGTA-----TTTGTTCGATTTTATTT---TTAAATA-AGAAAATATAGAAAATGAAA-TA-----TTTATGAAATATTTGATGTTAAATAAGACATCAATGTAT---GAAATGTTTATA-AAATATA--TACATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397854 128 - 1517660 TCAAATTTATGCATAGGTA-TTTGTTTGTTCGATTTTATTT---TTAAAT------aatatagaaaatgaaa-ta-----tttatgaaatatttgatattaaataagacatcaatgtat---gaaatGTTTATA-AAATATA--TACATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3494350 128 + 6513552 TCAAATTTATGCATAGGTA-----TTTGTTTGATTTTATTT---TTAAGTA-AGAaaatatagaaagtgaaa-ta-----tttatgaaatatttgatattaaataAGACATCAATGTAT---GAAATGTTTATA-AAATATA--TACAT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261422 120 + 117903854 TCAAATTTATGCGTAGGTA-----TTGGTTTGATATTATTT---TTAAATA-AGAAAAT-----ACACAGAA----------TATGAAATATTCAATATTAAATAAAACATCAGTGTAT---GACACATTTATA-ATATATA--TATACA i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19450348 121 - 31320352 TCAAATTTATGAATAGGTA-----TTGGTTTGATTTTATTT---TTAAATA-AGAAAATATAGAATACAGAA----------TATGAAATATTTGATATTAAACAAAACATCAACGTAT---GAAACATTTATA-AAATATA--TA---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1645950 124 + 2203405 CCAAATTTATGCATAGGTA-----TTGGTTTGATTTTATTT---TTaaata-agaaaatatagaatacagaa----------tatgaaatatttgatattaaatgaaacatcaatgtat---gaaacatttaca-aaa-ata--tatata i cebCap1.NW_016107689v1 C 0 I 405 s aotNan1.NW_018502140v1 3597708 125 - 14941987 TCAAATTTATGCATAGGTA-----TTGGTTTGATTTTATTT---TTaaata-agaaaatatagaatacagaa----------tatgaaatatttgatattaaataaaacatcaatgtat---gaaaaatTTATA-AAATATA--TACATA i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111838160 133 + 195471971 ttaaatatatgtatattaa-----atatattaaatatatgtatattaaatatattaaatatatcatatatatgta-----tatattaaatatatgtgtttaaat-----atatatgtatataAAAATACACACACACACATA--TGTGTG i mm10.chr1 I 3699 I 8 s dasNov3.JH575754 475551 117 - 2150887 ATAAATTT-TCCATGGGCAAATTGTTTCCTTG-CTTCATTT---TTAA-TA-AGAAAATGTAGAATATAGAA-TAATTATTTTATGAAATGCCTTAT--------AAACACATACATAT---GAAGTGTTTAAA-AA------------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=735620.000000 s hg38.chr18_GL383571v1_alt 130770 84 + 198278 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactgta-gatgaaaaggttaacata-----tatctagtttt s panTro5.chr18 65040802 84 + 78221452 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactgta-gatgaaaaggttaacata-----tatctagtttt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159891 84 + 77229886 CTGTTGTGCTGAATGAGTTGGatcttcagagtaaattcctagaatttggactgta-gatgaaaaggttaacata-----tatctagtttt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379419 84 + 17472758 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactgta-gatgaaaaggttaacata-----tatctagttat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419830 84 - 152096393 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactgta-gatgaaaaggttaacata-----tatctagtttt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369911 80 + 70235451 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactata-aatgaaaaggttaacata-----tatctag---- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061310 80 - 75711847 CTGTTGTACTGAATGAGTtggatcttcagagtaaattcctagaatttggactata-aatgaaaaggttaacata-----tatctag---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13620527 80 - 18804593 CTGTTGTATTGAATGAGTTGGatcttcagagtaaattcctagaatttggactata-aatgaaaaggttaacata-----tatctag---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232006 82 + 18905526 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactata-gatgaaaaggttaacata-----tatctagtt-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060606 80 - 72318688 CTGTTGTACTGAATGAGTTGGatcttcagagtaaattcctagaatttggactgca-gatgaaaaggttaagata-----tatctag---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 397982 80 - 1517660 CTATTGTACTGAATGAGTtggatcttcagagtaaattcctagaatttggactata-gatgaaaaggttaacata-----tatctag---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3494478 80 + 6513552 CTGTTGTACCGAATGAGTTGGatcttcagagtaaattcctagaatttggaatgta-gatgaaaaggttaacata-----tatctag---- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261544 83 + 117903854 GTGTTGTATTGAATGAGTTGGatcttcagagtaaattcctaggatttggactgtg-gatg-aaaggttaacaca-----tatctagtttt i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19450469 82 - 31320352 ------CATTGAATAAGTTTGatcttcagagtaaattcctagaatttggactgtg-gatg-aaaggttaacacatatagtatctagtttt i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3597833 83 - 14941987 GTGTTGTATTGAATGAGTtggatattcagagtaaattcctagaatttggactgtg-gatg-aaaggttaacaca-----tacctagtttt i aotNan1.NW_018502140v1 C 0 I 342 s mm10.chr1 111838301 77 + 195471971 CTTCTGTACTGAATAAGACACTTATTCAAAATAAATGCA-AGAATTTGGATTATG-GATT-AAAAGTTAACACA-----TATCTA----- i mm10.chr1 I 8 C 0 s dasNov3.JH575754 475668 61 - 2150887 ------------------------TCCAAAgtaaaatcctggaatttggattccaggatctaaagtttaataca-----taggtaatttt i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e cebCap1.NW_016107689v1 1646074 405 + 2203405 I a score=222495.000000 s hg38.chr18_GL383571v1_alt 130854 59 + 198278 tttgtgtgattttttgtttg---tttgtttttgagatatttccagattccctcattaagg-at s panTro5.chr18 65040886 57 + 78221452 tt-gtgtgatttttt-tttg---tttgtttttgagatatttccaaattccctcattaagg-at i panTro5.chr18 C 0 C 0 s panPan2.chr18 64159975 54 + 77229886 tttgtgtgatttttt--------tttgtttttgagatatttccaaattccctcattaagg-at i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379503 53 + 17472758 tttgtgtgatttttt---------ttgtttttgagatatttccaaattccctcattaagg-at i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419914 52 - 152096393 tgtgtgtgtgttttt----------tttttttgaaatatttccaaattccctcattaagg-at i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57369991 43 + 70235451 -----------tttt--------tttttttttgaggtatttccaaattccctcatgaagg-at i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061390 46 - 75711847 --------ttttttt--------tttttttttgaggtatttccaaattccctcatgaagg-at i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13620607 43 - 18804593 -----------tttt--------tttttttttgaggtatttccaaattccctcatgaagg-at i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232088 46 + 18905526 --------ttttttt--------tttttttttgaggtatttccaaattccctcatgaagg-at i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060686 52 - 72318688 ----------gttttttttggtatttttttttcagatatttccaaattccctcatgaagg-at i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398062 44 - 1517660 ----------ttttt--------tttttttttgaggtatttccaaattccctcatgaagg-at i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3494558 41 + 6513552 -------------tt--------tttttttttgagatatttccaaattccctcatgaagg-at i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261627 42 + 117903854 ------------gtt--------ttgtttttaaagatatttccaaattccctcattaaga-at i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19450551 42 - 31320352 ------------gtt--------ttgtttttaaagatatttccaaattccctcattaagg-at i saiBol1.JH378121 C 0 I 316 s mm10.chr1 111838378 32 + 195471971 ------------------------TGATTTGTTACATTTTTCTACATTTCTGTATA------- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 475729 33 - 2150887 ------------------------------gccagatagttacaaattgcctttcaaaagtat i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I e aotNan1.NW_018502140v1 3597916 342 - 14941987 I e cebCap1.NW_016107689v1 1646074 405 + 2203405 I a score=61166.000000 s hg38.chr18_GL383571v1_alt 130913 5 + 198278 tttac s panTro5.chr18 65040943 5 + 78221452 tttac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160029 5 + 77229886 tttac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379556 5 + 17472758 tttac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419966 5 - 152096393 tttac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370034 5 + 70235451 tttac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061436 5 - 75711847 tttac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13620650 5 - 18804593 tttac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232134 5 + 18905526 tttac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060738 5 - 72318688 tttac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398106 5 - 1517660 tttac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3494599 5 + 6513552 tttac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261669 5 + 117903854 tttac i calJac3.chr13 C 0 I 303 s saiBol1.JH378121 19450909 5 - 31320352 tttac i saiBol1.JH378121 I 316 C 0 s cebCap1.NW_016107689v1 1646479 5 + 2203405 tttac i cebCap1.NW_016107689v1 I 405 C 0 s aotNan1.NW_018502140v1 3598258 5 - 14941987 tttac i aotNan1.NW_018502140v1 I 342 C 0 s mm10.chr1 111838410 3 + 195471971 --TAT i mm10.chr1 C 0 C 0 s dasNov3.JH575754 475762 5 - 2150887 ttgac i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=3960472.000000 s hg38.chr18_GL383571v1_alt 130918 421 + 198278 cagtttgcattcctacta-aatatgtaagaaagttattgtttcgacatactcttacaagcaaagtatatta-atactcttgttagcagagtgtattattatgcatc------ttaatttttgct---------attctgat-----aatatgatggtttttatgt--gcatc-t-tttgattatcagagaggctaaacatctttccatatgctcaaagagg-ttttacatatgtttttggtagattgtctTTGTTTTTTTAAT-CATTGTCATGAGCCTTATGTGA----CTTTTCCTCTC-------Atgagtttcctattattaaggtat--cagtcctttatcagttatac-agtggt--atatattcttct-attttccatttgtctcttgactttgttt-tggtgttttt-ccctattcaattactctcttcttaaagttttatgcagtcaaatgtgtccaga s panTro5.chr18 65040948 422 + 78221452 cagtttgcattcctacta-aatatgtaagaaagttattgtttcgacatactcttacaagcagagtatatta-atactcttgttagcagagtgtattattatgcatc------ttaatttttgct---------attctgat-----aatatgatggtttttatgt--gcatc-t-tttgattatcagagaggctaaacatctttccatatgctcaaagagg-ttttacatatgtttttggtagattgtctTTGTGTTTTCAAT-CATTGTCATGAGCCTTATGTGA----CTTTTTCTCTC-------ATGAGTTTCCTATTATTAAGGTAT--CAGTCCTTTATCAGTTATAC-AGTGGT--ATATATTCTTCT-ATTTTCCATTTGTCTCTTGACTTTGTTT-TGGTGTTTTTTCCCTATTCAATTACTCTCTTCTTAAAGTTTTATGCAGTCAAATGTGTCCAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160034 422 + 77229886 cagtttgcattcctacta-aatatgtaagaaagtgattgtttcgacatactcttacaagcagagtatatta-atactcttgttagcagagtgtattattatgcatc------ttaatttttgct---------actctgat-----aatatgatggtttttatgt--gcatc-t-tttgattatcagagaggctaaacatctttccatatgctcaaagagg-ttttacatatgtttttggtagattgtctTTGTTTTTTTAAT-CATTGTCATGAGACTTATGTGA----CTTTTTCTCTC-------ATGAGTTTCCTATTATTAAGGTAT--CAGTCCTTTATCAGTTATAC-AGTGGT--ATATATTCTTCT-ATTTTCCGTTTGTCTCTTGACTTTGTTT-TGGTGTTTTTCCCCTATTCAATTACTCTCTTCTTAAAGTTTTATGCAGTCAAATGTGTCCAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379561 422 + 17472758 cagtttacattcctacta-aatatgtaagaaagttattgtttcgacatactcttacaagcagagtatatta-atactcttgttagcagagtgtattattatgcatc------ttaatttttgct---------attctgat-----aatatgatggtttttatgt--gcatc-t-tttgattatgagagaggctaaacatctttccatatgctcaaagagg-ttttacatatg-ttttggtagattgtctttgtttttttaatccattgtcatgaggcttatgtga----ctttttctctc-------atgagttttctattattaaggtat--cagTCCTTTATCAGTTATAC-AGTGGT--ATATATTCTTCT-ATTTTCCATTTGTCTCTTGACTTTGTTT-TGGTGTTTTTTCCCTATTCAATTACTCTCTTCTTAAAGTTTTATGCAGTCAAATGTGTCCAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139419971 430 - 152096393 cagtttgcattcctactc-gatatgtaagaaagttattgtttctaagtactcttgcaagcagagtatattatatactcttgttagcagagtgtattattatgcatc------ttaatttttgcc---------attctgat-----aatatgatggcttttatgt--gcatc-t-tttgattatcagagaggctaaacatctttctatatgctcaaagagg-ttttacatatgtttttggtagattgtctttgtttttttaatccattgtcatgagccttttgtga----ctttttctctcata-attatgagtttcctattattaaggtat--cagTCCTTTATCAGTTATAC-AGTGGT--ATATATTCTTCC-ATTTTCCATTTGTCTCTTGACTTTGTTT-TAGTGTTTTTTCCCTATTCAATTACTCTCCTCTTAAAGTTTTATGCAGTCAAATGTGTGCAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370039 430 + 70235451 cagtttgcattcctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattatatactcttgttagcagagtgtattattatgcatc------ttaatttttgccattctgataattctgat-----aatatgatggcttttatgt--gtgtc-t-cttgattatcagagaggctaaacatctttccatatgctc--agaga-ttttacatacgttttcgatagat------tgtttttttaatccattgtcatgagcc-tttgtga----ctttttctctcata-attatgagtttcttattattaaggtat--cagTCCTTGATCAGTGATAC-AGTGGT--ATATATTCTCCC-ATTTTCCATTTGCCTCTTGACTTCGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCAAATGTGTCAAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061441 430 - 75711847 cagtttgcattcctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattatatactcttgttagcagagtgtattattatgcatc------ttaatttttgccattctgataattctgat-----aatatgatggcttttatgt--gcgtc-t-cttgattatcagagaggctaaacatctttccatatgctc--agaga-ttttacatacgttttcgatagat------tgtttttttaatccattgtcatgagcc-tttgtga----ctttttctctcata-attatgagtttcttattattaaggtat--cagTCCTTGATCAGTGATAC-AGTGGT--ATATATTCTCCC-ATTTTCCATTTGCCTCTTGACTTCGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCAAATGTGTCAAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13620655 430 - 18804593 cagtttgcattcctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattatatactcttgttagcagagtatattactatgcatc------ttaatttttgccattctgataattctgat-----aatatgatggcttttatgt--gcgtc-t-cttgattatcagagaggctaaacatctttccatatgctc--agaga-ttttacatacgttttcgatagat------tgtttttttaatccattgtcatgagcc-tttgtga----ctttttctctcata-attatgagtttcttattattaaggtat--cagTCCTTGATCAGTGATAC-AGTGGT--ATATATTCTCCC-ATTTTCCATTTGCCTCTTGACTTCGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCAAATGTGTCAAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232139 430 + 18905526 cagtttgcattcctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattatatactcttgttagcagagtgtattattatgcatc------ttaatttttgccattctgataattctgat-----aatatgatggcttttatgt--gcgtc-t-tttgattatcagagaggctaaacatctttccatatgctc--agagg-ttttacatacgtttttgatagat------tgtttttttaatccattgtcatgagcc-tttgtga----ctttttctctcata-attatgagtttcttattattaaggtat--cagTCCTTGATCAGTGATAC-AGTGGT--ATATATTCTCCC-ATTTTCCATTTGTCTCTTGACTTCGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCAAATGTGTCAAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60060743 429 - 72318688 cagtttgcatccctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattctatactcttgttagcagagtgtattattatgcatc------ttaatttttgccattctgataattctgat-----aatatgatggcttttatgt--gcgtc-t-tttgattatcagagaggctaaacatctttccatatgttc--agagg-ttttacatatgttttCAGTAGAT--------TTTTTTTAATCCATTGTCATGAGCCTTTTGTGA----CTTTTTCTCTCATA-ATTATGAGTTTCCTATTATTAAGGTAT--CAATCCTTGATCAGTGATAC-AGTGGT--ATATATTCTTCC-ATTTTCCGTTTGTCTCTTGACTTTGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCAAATGTATAAAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398111 430 - 1517660 cagtttgcattcctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattatatactcttgttagcagagtgtactattatgcatc------ttaatttttgccattctgataattctgat-----aatatgatggcttttatgt--gcgtc-t-tttgattatcagagaggttaaacatctttccatatgctc--agagg-ttttacatacgttttcgatagat------tgtttttttaatccattgtcatgagcc-ttcgtga----ctttttctctcata-attatgagtttcttattattaaggtat--cagTCCTTGATCAGTGATAC-AGTGGT--ATATATTCTCCC-ATTTTCCATTTGTCTCTTGACTTCGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCGAATGTGTCAAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3494604 429 + 6513552 cagtttgcgttcctacta-aatatgtaagaaagttattgtttctacatactcttgcaaggagagtatattatatactcttgttagcagagtgtactattatgcatc------ttaatttttgccattctgataattctgat-----aatgtgatggcttttatgt--gcgtc-t-tttggttatcagagaggctaaacatctttccatatgctc--agagg-ttttacatatgttttcgGCAGAT--------TTTTTTAAATCCATTGTCATGAGCCTTTTGTGA----CTTTTTCTCTCATA-ATTATGAGTTTCCTATTAATAAGGTAT--CAGACCTTGATCAGTGATAC-AGTGGT--ATATATTCTTCC-ATTTTCCATTTGTCTCTTGACTTCGTTT-TGGTGTCTTTTTCCTATTCAATTACTCTCTTCTTAAAGGTTTATGCAGTCAAATGTGTCAAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105261977 419 + 117903854 cagtttgcattcctacta-catatgtaagaaagttactgtttctacatactcctgcgagcagagtattttatATA--CTTGTTAGC--AGTGTATTATTATAGATCTTAACTTTAACTTTTGCC---------ATTCTGAT-----A------------ATATGT--GTATCTT-TTTGATAATCAGAAAGGCTAAACATCTTTCCATATGCTCAAAGAGG-TTTTAAATATGTTTCTGGTAGATCGTCTGTGTTTTTTTAATCAGTTGTCATGAGCTTTTTGTAA----CTTTTTCTCTCATA-AC-ATGAGTTTCCTATGATTAAGGTAT--CAGCCCTTTATCAGTGATAC-AGTGGT--ATATATTCTTCC-ATTTTCCATATGTCTCTTGACTTTGTTC-TGGTGTTTTT-TTCTACTCAATTATTCTCTTCTTAAAGTTTTATGCTGTCAGATGTGTTGAGA i calJac3.chr13 I 303 C 0 s saiBol1.JH378121 19450914 421 - 31320352 cagtttgcattcctacta-gatatgtaagaaag-tattgtttctacatacgcttgcaagcagagtattttatata--cttgttagc--agtgtattattatgcatc------ttaatttttgcc---------attctgat-----attatgatggtttttatgt--gtatc-t-tttgattatcagagaggctgaacatctttccatatgctcaaagaggtttttaaatatgtttctggtagattgtctat-ttttttaaatccattgtcatgagctttttgtga----ctttttctctcata----ttgagttttctatgattaagatat--cagCCCTTTATCAGTGATAC-AGTGGT--ATATATTCTTCC-ATTTTCCATACGTCTCTTGACTCTGTTC-TGGTGTTTTT-TCCTACTCAGTTATTCTCTTCTTAAAGTTTTATGCTGTCAAATGTGTCAAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646484 418 + 2203405 cagtttgcattcctacta-gatatgtaagaaagttattgtttctacatactcttgcaagcagagtactttatata--cttgttagc--ggtgtattattatatacc------ttaatttttgcc---------attttgat-----aatatgatggtttttatgt--gtatc-t-tttgatgatcagagaggctgaacatctttccatatgctcaaagagg-ttttaagtatgtttctggtaga----ctatgtttttttaatccattgtcatgagctttttgtga----ctttttctctcata----ttgagtttcctatgattaagatat--cagCCCTTTATCAGTGATAC-AGTGGT--ATATATTTTTCC-ATTTTCCATATGTCTCTTGACTCTGTTC-TGGTGTTTTC-TCCTACTCAATTATTCTCTTCTTAAAGTTTTATGCTGTCAAACATGTCAAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598263 422 - 14941987 cagtttgcattcctatta-gatatgtaagaaagttattgtttccacacactcttgcaagcagagtattttatata--cttgttagc--agtgtattattatacatc------ttaa-ttttgtc---------agtctgat-----aatatgatggtttttatgt--gtatc-t-tttgattatcagagaggctgaacatctttccatatgctcaaagagg-ttttaaatatgtttctggtagatggtctat-ttttttaaatacattgtcatgagctttttgtga----ctttttctctcata-tt-atgagtttcctatgattaagatat--cagCCCTTTATCAGTGATAC-AGTGGT--ATATATTCTTTC-ATTTTCCATATGTCTCTTGACTTTGTTC-TGGTGTTTTT-TCCTACTCAATTATTCTCTTCTTAAAGTTTTATGCTGTCAAATGTGTCAAGA i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111838413 381 + 195471971 TGAGTTGGATTCCTACTA-AATAAGTATGAAGATT------------CACTATAAC--GCTCATTGCTCTATATACTCTTGTTGAAAAAACATTTTACTATG-ATT------TTAATTTAAGAACTTAATTTAATTTTAATGCTTCATTGTAGTGCTTTATATGTCAACATT-T-ATTGTGCAGAAGATAAACTCATTATA-TTCCTTAGGTTCACTATAA-TTATACAT--------GGCATAC------TGGTTGTTTTGTTTAGTGT-GTGAGCTCCATGTGATTTCTTTTCTTTCTCATG-TC-ATGAACTAC-TAATATTAGGACAT---------------------A-AGTAGT--ACATGTTCCTCC-ACTT----------TTTTTACTTTACAT-TGGTATATTT-TACTATGTAATAAAACTATTATTA---TTTTATGTAATCAAATGTATCA--- i mm10.chr1 C 0 I 1 s dasNov3.JH575754 475767 395 - 2150887 caatctgcattgccatcattagatatatgaaagttcatgtttctcc--------------------------acagccttgccagcaaagtgtattattgtatttc------ccaatttttgtc---------aatgagat-----aaaataat---tttaatct--gcatt-tctttgattatgagatagactgaacatctttc-atattttt----aat-gtttacaactttttttggtgaattgtttatttttatt---cctatttttatgggtttctttaat----atatttgtctcatttataaaaggcttctttatattaggggatagtagtcctttctgagtgatataagttgcaaatatattcttcctatttgccatttttcttttgactttGCTTATGATGTCTTT----TGCTCTGTGATTCTTTTT----AATTTTATGTAGACAAATGTATTGTGT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I e otoGar3.GL873546 11227901 122 - 20685099 I a score=67921.000000 s hg38.chr18_GL383571v1_alt 131339 6 + 198278 ttttct- s panTro5.chr18 65041370 6 + 78221452 TTTTCT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160456 6 + 77229886 TTTTCT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379983 6 + 17472758 TTTTCT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420401 6 - 152096393 TTTTCT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370469 5 + 70235451 -TTTCT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061871 5 - 75711847 -TTTCT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621085 5 - 18804593 -TTTCT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232569 5 + 18905526 -TTTCT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061172 5 - 72318688 -TTTCT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398541 5 - 1517660 -TTTCT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495033 5 + 6513552 -TTTAT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262396 6 + 117903854 TTTTCT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451335 6 - 31320352 TTTTCT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646902 6 + 2203405 TTTTCT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598685 6 - 14941987 TTTTCT- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228023 6 - 20685099 TTCTCT- i otoGar3.GL873546 I 122 C 0 s mm10.chr1 111838795 6 + 195471971 TTTTCT- i mm10.chr1 I 1 C 0 s dasNov3.JH575754 476162 6 - 2150887 -TTTCTT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112300313 2625 - 122678785 I a score=69702.000000 s hg38.chr18_GL383571v1_alt 131345 6 + 198278 tttatt s panTro5.chr18 65041376 6 + 78221452 TTTATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160462 6 + 77229886 TTTATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379989 6 + 17472758 TTTATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420407 6 - 152096393 TTTATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370474 6 + 70235451 TTTATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061876 6 - 75711847 TTTATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621090 6 - 18804593 TTTATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232574 6 + 18905526 TTTATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061177 6 - 72318688 TTTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398546 6 - 1517660 TTTATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495038 6 + 6513552 TTTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262402 6 + 117903854 TTTATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451341 6 - 31320352 GTTATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646908 6 + 2203405 TTTACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598691 6 - 14941987 TTTACT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228029 6 - 20685099 TTTATT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111838801 4 + 195471971 TTAA-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112302938 6 - 122678785 ttaatt i canFam3.chr1 I 2625 C 0 s dasNov3.JH575754 476168 6 - 2150887 CTTCTT i dasNov3.JH575754 C 0 I 1548 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=310831.000000 s hg38.chr18_GL383571v1_alt 131351 28 + 198278 gGGTTTTTctcaaattgcaat------tatggtc-- s panTro5.chr18 65041382 28 + 78221452 GGGTTTTTctcaaattgcaat------tatggtc-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160468 28 + 77229886 GGGTTTTTctcaaattgcaat------tacggtc-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5379995 28 + 17472758 GGGTTTTTctcaaattgcaat------tatgatc-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420413 28 - 152096393 GGATTTTTctcaaattgcaat------tacggtc-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370480 28 + 70235451 GGGTTTTTctccaattgcaat------tatggtc-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061882 28 - 75711847 GGGTTTTTctccaattgcaat------tatggtc-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621096 28 - 18804593 GGGTTTTTctccaattgcaat------tatggtc-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232580 28 + 18905526 GGGTTTTTctccaattgcaat------tatggtc-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061183 28 - 72318688 GGGTTTTTctccaattgcaat------tatggtc-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398552 28 - 1517660 GGGTTTTTctccaattgcaat------tatggtc-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495044 28 + 6513552 GGGGTTTTctccaattgcaat------tatggtc-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262408 28 + 117903854 GGGTTTTTctcaaattacaat------tatggtc-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451347 28 - 31320352 GGGTTTTTctcaaattgtaat------tatggtc-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646914 28 + 2203405 GGGTTTTTctcaaattgcaat------tatggtc-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598697 28 - 14941987 GGGTTTTTctcaaattgcatt------tatggtc-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228035 30 - 20685099 GAGTTGTTctcaaatggcaaa------tttcgtctt i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111838805 34 + 195471971 AATCATTTTTGAGATTGCAGTCCTAAATACAGTA-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112302944 28 - 122678785 tggttgttctcagattgaaag------tcggact-- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 476174 1548 - 2150887 I a score=405722.000000 s hg38.chr18_GL383571v1_alt 131379 34 + 198278 t------taagtagcaggccaaatcttagttcagttattc s panTro5.chr18 65041410 34 + 78221452 t------taagtagcaggccaaatcttagttcagttattc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160496 34 + 77229886 t------taagtagcaggccaaatcttagttcagttattc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380023 34 + 17472758 t------taagtagcaggccaaatcttagttcagttattc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420441 34 - 152096393 t------taagtagcaggccgaatcttggttcagttattc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370508 34 + 70235451 t------taagtagcaggccaaatctgagttgagttattc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061910 34 - 75711847 t------taagtagcaggccaaatcttagttgagttattc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621124 34 - 18804593 t------taagtagcaggccaaatcttagttgagttattc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232608 34 + 18905526 t------taagtagcaggccaaatcttagttgagttattc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061211 34 - 72318688 t------taagtagcaggccaaatcttagttcagttattc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398580 34 - 1517660 t------taagtagcaggccaaatcttagttgagttattc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495072 34 + 6513552 t------taagtagcaggccaaatctcagttcagttattc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262436 34 + 117903854 t------tgagtagcaggccaagtcttggttcagttactc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451375 34 - 31320352 t------tgagtagcaggccaagtcttggttcagttattc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646942 34 + 2203405 t------tgagtagcaggccaagtttttgttcagttattc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598725 34 - 14941987 t------tgagtagcaggccaagtctttgttcagttattc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228065 33 - 20685099 t------tgcatagcaagtcaaattttacataagttatt- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111838839 38 + 195471971 TTTTATCTGTATAGCAGATCAAAACT--GTTTAGTTATTT i mm10.chr1 C 0 I 14 s canFam3.chr1 112302972 33 - 122678785 t-----ctgagtagcaggtcta--ctttgttcatctgttg i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 477722 29 - 2150887 t------tgagttgcaggtcaaatct-----cagttattt i dasNov3.JH575754 I 1548 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=162803.000000 s hg38.chr18_GL383571v1_alt 131413 19 + 198278 tattcttatgttgc--ctact s panTro5.chr18 65041444 19 + 78221452 tattcttatgttgc--ctact i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160530 19 + 77229886 tattcttatgttgc--ctact i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380057 19 + 17472758 tattcttatgttgc--ctact i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420475 19 - 152096393 tatttttatgttgc--ctgct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370542 19 + 70235451 tatccttatgttgc--ctatt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061944 19 - 75711847 tatccttatgttgc--ctatt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621158 19 - 18804593 tatccttatgttgc--ctatt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232642 19 + 18905526 tatccttatgttgc--ctatt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061245 19 - 72318688 tatccttatgttgc--ctatt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398614 19 - 1517660 tatccttatgttgc--ctatt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495106 16 + 6513552 tatccttatgttcc--c---t i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262470 19 + 117903854 tattcttatgttgc--ctact i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451409 16 - 31320352 ta---ttatgttgc--ctact i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646976 16 + 2203405 ta---ttaaattgc--ctact i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598759 19 - 14941987 tattcttaccttgc--ctact i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228098 10 - 20685099 ---------gttga--ctgca i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112303005 19 - 122678785 tgtcttcatgtata--ctact i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 477751 21 - 2150887 tatccttgtggagcgactgtt i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111838877 14 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1354702.000000 s hg38.chr18_GL383571v1_alt 131432 121 + 198278 aagactgt-gtcttcagcatt------tgtg--------gtcagcctgac----aggcagagtaaatgcagataatttgtgcc-tctaatccctggtactctccttttcctgtttcctctttcacttcccagtgAAGAttt s panTro5.chr18 65041463 121 + 78221452 aagattgt-gtcttcagcatt------tgtg--------gtcagcctgac----aggcagagtaaatgcagataatttgtgcc-tctaatccctggtactctcctcttcctgtttcctctttcacttcccagtgAAGATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160549 121 + 77229886 aagactgt-gtcttcagcatt------tgtg--------gtcagcctgac----aggcagagtaaatgcagataatttgtgcc-tctaatccctggtactctccttttcctgtttcctctttcacttcccagtgAAGATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380076 121 + 17472758 aagactct-gtcttcagcatt------tgtg--------gtcagcctgac----aggcagagtaaatgcagataatttgtgcc-tctaatccctggtactctccttttcctgtttcctctttcacttcccagtgAAGAttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420494 121 - 152096393 gagactgt-gtcttcggcatt------tgtg--------gtcagcctgac----aggcagagtaaatgcaggtaatttgtgcc-tctaatccctggtactctccttttcctgtttcctctttcacttcccagtgAAGattt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370561 126 + 70235451 aagactcttgtctttagcatt------tgtg--------gtcagcctgacagccaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcttgtttcttctttcacttcccagtgAAGATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63061963 126 - 75711847 aagactcttgtctttagcatt------tgtg--------gtcagcctgacagccaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcttgtttcttctttcacttcccagtgAAGATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621177 126 - 18804593 aagactcttgtctttagcatt------tgtg--------gtcagcctgacagccaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcttgtttcttctttcacttcccagtgaagattt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232661 126 + 18905526 aagactctcgtctttagcatt------tgtg--------gtcagcctgacagctaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcttgtttcttctttcacttcccagtgaagattt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061264 126 - 72318688 aagactcttgtccgtagcatt------tgtg--------gtcagcctgacagccaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcctgtttcctctttcacttcccagtgAAGATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398633 126 - 1517660 aagactctcgtctttagcatt------tgtg--------gtcagcctgacagctaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcttgtttcttctttcacttcccagtgAAGATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495122 120 + 6513552 aagactctcgt------catt------tgtg--------gtcagcctgacagccaggcagagtaaatgcagataatttgtgcc-tccagtcccaggtactctccttttcctgtttcctctttcacttcccagtgAAGATTT i colAng1.NW_012115433v1 C 0 I 2 s calJac3.chr13 105262489 124 + 117903854 tagactct-gcttttagcatt------tgcg--------gtgagcctgccagctaagcagatcaaatgcagagaatttgtgcc-tccaatcccaggtactctccttttcctgtttcatctttcac-tccagGTGAAGattt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451425 125 - 31320352 aagactct-gtctttagcatt------tgtg--------gtgagcctgccagctaagcagatcaaatgcagagagtttctgcc-tccaatcccaggtactctccttttcctgtttcatcttccacttcccagtgAAGAttt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1646992 125 + 2203405 aagactct-gtctttagcatt------tgta--------gtgagcctgccagttaagcagatcaaatgcagagaatttgtgcc-tccaatctcaggtagtctccttttcctgtttcatctttcacttcccagtgAAGATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598778 125 - 14941987 aagactct-gtctttagcatt------tgtg--------gtgagtctgccagctaagcagatcaaatgaagagaatttgtgcc-tccaatcccaggtactctccttttcctgtttcatctttcacttcccagtgAAGAttt i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228108 130 - 20685099 aagact---atcttgagcatt------tgtgggttaggagtcagtcaggcagctcagaagagttaatgcagagaatttgtgtc-ccca-tctctgcccctcctctgtgtccattttctctgtcactttcaagtgAAGATTT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111838891 125 + 195471971 AAGTCCAT-GA-TTTAGCATTGTAAAGTAAG--------GCCATCTAGACAGCTGG---AGGTTCATGTAAATAACATCTGTTGGACAGTCTTTGGCACTCCCCTGTTC---TTTTCTTCTTCCTTGTCCAGTGAGCATTC i mm10.chr1 I 14 I 190 s canFam3.chr1 112303024 130 - 122678785 aagacact-gtccttagcatc------tgtg--tttagggttggccagatatgtaggcagagttcatacatagaaattgtgcc--ccaatctcttacaattccctttcccagtttctttggtcactttccagtgaagtttt i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 477772 124 - 2150887 aaaacttt-gtcct----gtt------tgtggtttaggggtcagcc-aatatttgggctgagtttttttatagaatctgtgcc-cccttcctctg--actctttttccccagtttcttcattcacttttcagtgaagtt-- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1244114.000000 s hg38.chr18_GL383571v1_alt 131553 133 + 198278 atttttttt--taattttt----------atgtattctttttGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcgatgaaaatgagaaaatcactcccgccattcccttttaccactg-gtggtttacttgcc s panTro5.chr18 65041584 133 + 78221452 ATTTTTTTT--TAATTCTT----------ATGTATTATTTTTGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcgatgaaaatgagaaaatcactcccgcctttcccttttaccactg-gtggtttacttgcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160670 134 + 77229886 ACTTTTTTT-GTAATTTTT----------ATGTATTATTTTTGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcgatgaaaatgagaaaatcactcccgccattcccttttaccactg-gtggtttacttgcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380197 135 + 17472758 atttttttttttaattttt----------atgtattatttttGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcgatgaaaatgagaaaatcactcccgccattcccttttaccactg-gtggtttacttgcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420615 133 - 152096393 atttatttt--ttattttt----------atgtattCTTTTTGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcgatgaaaatgagaaaatcactcccgccattcccttttaccactg-gtggtttacttgac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370687 132 + 70235451 AATATTTTTTAAAATTTTT----------ATGTA---TTTTTGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcctgcaattcctttttgccaatg-gtggtttacttgcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062089 132 - 75711847 AATATTTTTTAAAATTTTT----------ATGTA---TTTTTGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcctgcaattcctttttgccaatg-gtggtttacttgcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621303 132 - 18804593 aatattttttaaaattttt----------atgta---tttttgcttccatgtgtggtgcagacaagggctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcctgcaattcctttttgccaatg-gtggtttacttgcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232787 132 + 18905526 aatattttttaaaattttt----------atgta---tttttgcttccatgtgtggtgcagacaagggctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcccgcaattcctttttgccaatg-gtggtttacttgcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061390 132 - 72318688 AATATTTTTTAAAATTTTT----------ATGTA---TTTTTGCTTCCATGTGTGGTGCAGACAAGAGctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcccgccattcctttttgccagtg-gtggtttacttgcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398759 132 - 1517660 AATATTTTTTAAAATTTTT----------ATGTA---TTTTTGCTTCCATGTGTGGTGCAGACAAgggctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcccgcaattcctttttgccaatg-gtggtttacttgcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495244 132 + 6513552 AATTTTTTTTTTAATTTTT----------GTGTA---TTTTTGCTTCCATATGTGGTGCAGACAAgggctggc--ctcaggctagaagcaatgaaaatgagaaaatcactcccgccattcctttttgccaatg-gtgctttacttgcc i colAng1.NW_012115433v1 I 2 C 0 s calJac3.chr13 105262613 125 + 117903854 attttt-------attttt-----------taaattatttttGCTTCCATATGTGGTTCGGACAAGGGgtggc--ctgaggctagaagtgatgaaaatatgaaaatcactcccatcatt--cctttgccaatg-gtggtttacttgcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451550 127 - 31320352 attttt-------attttt----------attaattatttttgtttCCATGTGTGGTTCAGACAAGGGGTGGC--ctcaggctagaagtgatgaaaatatgaaaattactcccatgatt-ccctttgccaacg-gtggtttacttgcc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647117 127 + 2203405 ATTTTT-------ATTTTT----------ATTAATTATTTTTGCTTCCATGTGTGGTTCAGGCAAGGGGTGGC--ctcaggctagaagtgatgaaaatatgaaaatcactaccgtcatt-ccctttgccaatg-gtggtttacttgcc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3598903 138 - 14941987 attttt-------atttatttttatttgtattaattatttttGCTTCCATGTGTGGTTCAGACAAGGGGTGGC--ctcaggctagaagtgatgaaaatatgaaaatcactcccaccattcccttttgccaatg-gtggtttacttgcc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228238 116 - 20685099 -------------CTCTTG----------GTGAG----tttagctgcc-tgtgtggcgcagacagaggcctgc--ccctgtc-agaagtgataaaatagagaaaatcccttgtgtcattgtcttctgccaatg-gtgatcttcatttc i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112303154 114 - 122678785 -------------ctcttc----------ttgta--------gtggccatgtgcagtacaggtgaggcctgcc--atctggctagaagtggtgagaacaaccaattcaccaggaccattcccttctaccaatgaggaatttccttga- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 477896 121 - 2150887 -------------atttta----------ttgga---gtttaaccaccatgtaaggtgtaggctacgtctgcctgcacaggatatcagtgctgaaaatggaaaattcactaatacaattcccttcttttaatg-gtgaaattctgacc i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111839016 190 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=2692841.000000 s hg38.chr18_GL383571v1_alt 131686 228 + 198278 agtttctgctaacttttgatcattccccagtgacttccggtag----ttgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgatctaatggaagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAATTAGAAAGCCTTATCCTAT-ACTCATGTCAAGGACAAGTTTCCAAAGTAATTAGACAATTCTAACTAG s panTro5.chr18 65041717 228 + 78221452 agtttctgctaacttttgatcattccccagtgacttccggtag----ttgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgatctaatggaagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAATTAGAAAGCCTTATCCTAT-ACTCATGTCAAGGACAAGTTTCCAAAGTAATTAGACAATTCTAACTAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64160804 228 + 77229886 agtttctgctaacttttgatcattccccagtgacttctggtag----ttgttca-tttttgtatt---------------ttctctagagttta---tagctaatatctgtgggaag--ttgatctaatggaagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAATTAGAAAGCCTTATCCTAT-ACTCATGTCAAGGACAAGTTTCCAAAGTAATTAGACAATTCTAACTAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380332 228 + 17472758 agtttctgctaacttttgatcattccccagtgacttccggtag----ttgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgatctaatggaagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAATTAGAAAGCCTTATCCTAT-ACTCATGTCGAGGACAAGTTTCCAAAGTAATTAGACAATTCTAACTAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420748 228 - 152096393 agtttctgctaacttttgatcattccccagtgacttccagtag----ttgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ctgatccgatggaagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAGAATTAGAAAGCCTTATCCTAT-ACCCACGTTGAGGACAAGTTTCCAAAGTAATTAGATACTTCTAACTAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57370819 228 + 70235451 agtttctgctacattttgatcattcctcagtgacttccagtgg----ctgttca-tttttctatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgattcaatggaagctaacttgtcccttactaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTATCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062221 228 - 75711847 agtttctgctacattttgatcattcctcagtgacttccagtgg----ctgttca-tttttctatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgattcaatggaagctaacttgtcccttactaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTATCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621435 228 - 18804593 agtttctgctacattttgatcattcctcagtgacttccagtgg----ctgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgattcaatggaagctaacttgtcccttactaggag---tgaaaCACAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTATCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13232919 228 + 18905526 agtttctgctacattttgatcattcctcagtgacttccagtgg----ctgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtggaaag--ttgattcaatggaagctaacttgtcccttactaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTATCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061522 228 - 72318688 agtttctgctacattttgatcattccccagtgacttccagtgg----ctgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgattcaatggaagctaacttgtcccttctcaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTATCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 398891 228 - 1517660 agtttctgctacattttgatcattcctcagtgacttccagtgg----ctgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtggaaag--ttgattcaatggaagctaacttgtcccttactaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTATCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495376 228 + 6513552 agtttctgctacattttgagcattcctcagtgacttcctgtgg----ctgttca-tttttgtatt---------------ttctctagagttta---tagctactatctgtgggaag--ttgattcaatggaagctaacttgtcccttatcaggag---tgaaaCCCAAGCATGTAAATTTTG--TCAAAGTTAGAAAGCCTTCTCCTAT-ACCCATGTTGAGGACAAGTTTCCAAAGTAATTAGATAATTCTAACTAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262738 231 + 117903854 agtttctgctgacttttgatcattccccagtgtcttccagtagttgtttggtca-tttttgtatt---------------ttttctagtgttta---tagctactatctatggaaag--ttgattcaatggtagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTACATTTTG--TCATAGTTAG-AAGCCTTATCCTAT-ATTCAGGTTGAGGACAAATTTCCAAAGTAATTAGATAATTCTAGCTAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451677 232 - 31320352 agtttctgctaacttttgatcattccccagtgtcttccagcagttgtttgttca-tttttgtatt---------------ttctctagagttta---tagctactatctatgggaag--ttgattcaatggtagctaacttgtcctttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TTATAGTTAGAAAGCCTTATCCTAT-ATTCAGGTTGAGGACAAATTTCCAAAGTAATTAGATAATTCTAGCTAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647244 228 + 2203405 agtttctgctaacttctgatcattccccagtgtcttccagtagttgtttgttca-tttttgtatt---------------ttctctagagttta---tagctactatctatgggaag--ttgattcaatggtagctaacttgtcccttaccaggag---tgaaTGCCAAGCATGTAAATTTTG--TTATAGTTAGAAAGCCTTATCCTAT-ATTTAGGTTGAGGACAAATTTCCA----AATTAGATACTTCTAGCTAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3599041 221 - 14941987 agtttctgctaacttttgatcattccccagtgtc-----------gtttgttca-tttttgtatt---------------ttctctagagttta---cagcaactatctatgggaag--ttgattcaatggtagctaacttgtcccttaccaggag---tgaaaCCCAAGCATGTAAATTTTG--TTATACTTAGAAAGCCTTATCCTAT-ATTCATGTTGAGGACAAATTTCCAAAGTAATTAGATAATTCTAGCTAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228354 230 - 20685099 agtttctgctacctttatattactcctcggtgtcttc-aatag----ttgcttattttttatatt---------------tcctctagagttta---tggtt-ctttctatgggaag--ttgatccaatgggagctcacGGGTTGCTCACCAGGTGGGAGGAAACTCCCGGAGGTAAGTTTGG--TCATAGTTAGAAAGTCTTACCCTATAAACCGCGTTG-GGAAAAGTCACCAGCGTAATCAGATAATTCTAACTAG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111839206 224 + 195471971 AGTTT-TATTAATATTT--TTACTCTATAGTATCTTTTAGTAT----TTATATG-ATCTAGTAAT---------------TTTTTAAGAGTTTATACTAGCTGCTATCCATAAGACA--TTTATTCAGT----ACTTAGTTGTCCCAAATGAGAAG---TGAAATGCAAGGATGTAAACTTTGAATTATGATTAAAGGACTTCAT--TAT-GTCTAGATTTAACAGAGGTTTCCAAAATAATTAGAAACTTCCAACCTA i mm10.chr1 I 190 C 0 s canFam3.chr1 112303268 204 - 122678785 aagttctgccacctttggaccgtcctccagtgtcttccagtgg----ttgtgtg-cttatttacttaccatttattttagttctctggagttta---tagctgctatctgTAAACAGGCTGAAAAAAACCAGAGCTTACTTGGCTTGTACAGAAAG---TGAAC---------------------TCA-----------------------AGCCAGGATAAAGACAAGATTTCAAAGTAATCAGATCATTCTAACTAG i canFam3.chr1 C 0 I 2722 s dasNov3.JH575754 478017 195 - 2150887 agtttctgccaacttttgatgactct--gatgtcttctagtag----t-------gtttcctatt---------------ttctctagactttg---gagttgttatgtatggaaagg-ttggtccaacaggagcttTCCTGGCCCCTTTT--------TGAA----------------------TCATAGCTAG-AAGTCTTTTATTAT-GCTCTGGTTGAGGACAAGTTTCCCAAGTAATCAGTAGATTCTAACTAG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=534194.000000 s hg38.chr18_GL383571v1_alt 131914 51 + 198278 AAAAGGTTTACCCTAATG----CTTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- s panTro5.chr18 65041945 51 + 78221452 AAAAGGTTTACCCTAATG----CTTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161032 51 + 77229886 AAAAGGTTTACCCTAATG----CTTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380560 50 + 17472758 AAAAGGTTTACCC-AATG----CTTCCTCAAACATTCATTTTTCCCAAAATTC---TT--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139420976 51 - 152096393 GAAAGGTTTACCCTAATG----CTTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371047 51 + 70235451 AAAAGGTTTACCCTAATG----AGTTCCCAAATATTCATTTTTCCAAAAATTC---TT--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062449 51 - 75711847 AAAAGGTTTACCCTAATG----AGTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621663 51 - 18804593 AAAAGGTTTACCCTAATG----AGTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13233147 51 + 18905526 AAAAGGTTTACCCTAATG----AGTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061750 51 - 72318688 AAAAGGTTTACCCTAATG----CTTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 399119 51 - 1517660 AAAAGGTTTACCCTAATG----AGTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495604 51 + 6513552 AAAAGGTTTACCCTAATG----CTTTCTCAAATATTCATTTTTCCAAAAATTC---TT--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105262969 51 + 117903854 AAAAATTTTACTCTAATG----CTTTCTCAAACACTCATTTTTCCAAAAATTC---TT--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451909 51 - 31320352 AAAAATTTTAACCTAATG----CTTTCTCAAACACTCATTTTTCCAAAAATTC---TT--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647472 51 + 2203405 AAAAATTTTACCCTAATG----CTTTCTCAAACACTCATTTTTCCAAAAATTC---TT--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3599262 54 - 14941987 AAAAATTTTACCCTAATG----CTTTCTCAAACACTCATTTTTCCAAAAATTCTTATT--- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228584 51 - 20685099 ---ATGTTTTCTCTACTGCTTTCTTTCTCAAATACTCA-TTTTCCACAAAGTC---TT--- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111839430 39 + 195471971 AAGAGATTTACTC---------TTTGCTCA-------ACATTTCAAAATAACT---TT--- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 478212 48 - 2150887 AAGA----CATCCTAA------TTTTCTCAAATATTCACTTTCTACAAATTTC---TCACT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112303472 2722 - 122678785 I a score=141904.000000 s hg38.chr18_GL383571v1_alt 131965 13 + 198278 AACT----TTTAGTATA s panTro5.chr18 65041996 13 + 78221452 AACT----TTTAGTGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161083 13 + 77229886 AACT----TTTAGTATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380610 13 + 17472758 AACT----TTTAGTATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139421027 13 - 152096393 AACT----TTTAGTATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371098 13 + 70235451 AACT----TTTAGTACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062500 13 - 75711847 AACT----TTTAGTACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621714 13 - 18804593 AACT----TTTAGTACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13233198 13 + 18905526 AACT----TTTAGTACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061801 13 - 72318688 AACT----TTTAGTACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 399170 13 - 1517660 AACT----TTTAGTAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495655 13 + 6513552 AACT----TTTAGTACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105263020 13 + 117903854 ATTT----TATAGTACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19451960 13 - 31320352 ATTT----TATAGTACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647523 13 + 2203405 ATTT----TGCAGTACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3599316 13 - 14941987 ATTT----TATAGCACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228635 12 - 20685099 A-CT----TTTAGCATA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111839469 17 + 195471971 GACTAAACTTTAATACA i mm10.chr1 C 0 I 892 s canFam3.chr1 112306194 13 - 122678785 AACT----TTTAGAATA i canFam3.chr1 I 2722 C 0 s dasNov3.JH575754 478260 13 - 2150887 AACT----TTTAGTACA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1326323.000000 s hg38.chr18_GL383571v1_alt 131978 129 + 198278 AAATCAA-TTTATTTCATTGA---G-AAAAA--ACGAATATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTGTATCGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAG s panTro5.chr18 65042009 129 + 78221452 AAATCAA-TTTATTTCATTAA---G-AAAAA--ACGAATATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATTGTCTCTTGTATCGCTATCTGAAAAGTAAACTGCATAACTACCACGCCTTATAAAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161096 129 + 77229886 AAATCAA-TTTATTTCATTAA---G-AAAAA--ACGAATATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTGTCTTGTATCGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380623 129 + 17472758 AAATCAA-TTTATTTCATTAA---G-AAAAA--ACGAATATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTGTATCGCTATCTGAAAAGTAAACCGCATAACTACCATGCCTTATAAAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139421040 129 - 152096393 AAATCAA-TTTATTTCATTAA---G-AAAAA--ATGAATATTTTTGTCACTTGTTGCAAAAGGTCAATCTGGTTCTAACAGTCTCTTGCATCACTATCTGAAAAGTAAACCGCATAACTACCATGCCTTATAAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371111 129 + 70235451 AAATCAATTTTATTTCA-TAA---G-AAAAA--GCGAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATCGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062513 129 - 75711847 AAATCAATTTTATTTCA-TAA---G-AAAAA--GCAAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATCGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621727 129 - 18804593 AAATCAATTTTATTTCA-TAA---G-AAAAA--GCGAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATCGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13233211 129 + 18905526 AAATCAATTTTATTTCA-TAA---G-AAAAA--GCGAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATCGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061814 129 - 72318688 AAATCAGTTTTATTTCA-TAA---G-AAAAA--GCGAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATTGCTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 399183 129 - 1517660 AAATCAATTTTATTTCA-TAA---G-AAAAA--GCGAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATCGCCATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495668 129 + 6513552 AAATCAATTTTATTTCA-TAA---G-AAAAA--GCGAGTATTTTTGCCACTTGTTGCAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATCGCTATCTGAAAAGTAAACTGCGTAACTATCATGCCTTATAAAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105263033 127 + 117903854 TAATCAA-TTTATTTCATTAA---G-AAAAA--ATTAGTATTTTTGACACTTGTTAGAAAAGGTCAATCTGGTTTTCATAGTCTC--ATATTATTATCTGAAAAGTAAACTGCATAACTACCATGCCTTATAAAGA i calJac3.chr13 C 0 I 309 s saiBol1.JH378121 19451973 126 - 31320352 TAATC-----TATTTCATTAA---GAAAAAA--ATGAGTATTTTTGACACTTGCTAGAAAAGGTCAATCTGGTTTTAATAGTCTCTTATATTGTTATCTGAAGAGTAAAGTGCATAAGTACTATGCCTTATAAAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647536 114 + 2203405 TAATCAA-TTTATTTCATTAA---G-AAAAA--ATGAGT---------------TAGAAAAGGTCAATCTGGTTTTAATAGTCTCTTATAACGTTATCTGAAAAGTAAACTGCATAAATACTATGCCTTATAAAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3599329 125 - 14941987 TTATCAA-TTTAT----TTAA---G-AAAAA--ATTAGTATTTTTGACACTTGTTAGAAAAGGTCAATCTGGCTTTAATAGTCTCTTATATCGTTATCTGAAAAGTAAATTGCATAACTACTATGCCTTATAAAGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228647 131 - 20685099 GAATAGATTTTACTCAA-TAAAGGG-AAAAC--ATGGGTATTTTTATCACTAGTTGCAAAAGGTCAATTTAGTTTTGACAG-CTACCGTGATACTATATTAAAAGTAAATTACATAACTACCATACCTCATAAAAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112306207 106 - 122678785 AAACCAATTTAATTCGATTAA---A-AAGGAT-ATTAATACTTTTATTGCTAGTTGCAGAAGTTCAATCCA------------TCTCCTGTTAATATTTGAA-AGTA------------ACAATGCCTTATAAAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 478273 122 - 2150887 AAAACAATTTCATTTAGCTAG---G-AAAAATGGTTAAAACTTTTGTCAATTATTGTAAAACTTCAATCTGGTTTTAATA-TCTCTTATGATAAT------AAAGTAAAG---GTAACTATAATTCCATAGAAAAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111839486 892 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1847742.000000 s hg38.chr18_GL383571v1_alt 132107 168 + 198278 TGATTGTTTCAATGACCATAAGGGATATCAAAATCACCAACATCAAGTAA-CCAAGCTTTATCTATA-TGGACAATTCAAACAAAATATAATTTGATCAATAATGACCTGTGCTGAGGAACAAA---TGCACACATCATGAAGCCCCTG--TTATT--CAGTTTGAGGATTA-CTTTT s panTro5.chr18 65042138 168 + 78221452 TGATTGTTTCAATGACCATAAGGAATATCAAAATCACCAATATCAAGTAA-CCAAGCTTTATCTATA-TGGACAATTCAAACAAAATATAATTTGATCAATAATGACCTGCGCTGAGGAACAAA---TGCACACATCATGAAGCCCCTG--TTATT--CAGTTTGAGGATTA-CTTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161225 168 + 77229886 TGATTGTTTCAGTGACCATAAGGGATATCAAAATCACCAATATCAAGTAA-CCAAGCTTTATCTATA-TGGACAATTCAAACAAAATATAATTTGATCAATAATGACCTGTGCTGAGGAACAAA---TGCACACATCATGAAGCCCCTG--TTATT--CAGTTTGAAGATTA-ATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380752 168 + 17472758 TGATTGTTTCAATGACCATAAGGGATATCAAAATCACCAAAATCAAGTAA-CCAAGCTTTATCTATA-TGGACAATTCAAACAAAATATAATTTGATCAATAATGACCTGTGCTGAGGAACAAA---TGCACACATCATGAAGTCCCTG--TTATT--CAGTTTGAGGATTA-CTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139421169 168 - 152096393 TGATTGTTTCAATGACCATAAGGGATCTCAAAATCACCAATATCAAGTAA-CCAAGCTTTATCTATG-TGGACAATTCAAACAAAATATGATTCAATCAATAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--TTATT--CAGTTTGAGGATTA-CTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371240 169 + 70235451 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAAGTAA-CCAAGCTTTATTTACA-TGGACAATTCAAACAAAATATGATTTGATCAACAATGACGTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--GTACT--CAGTTTGAGCATTACCTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062642 169 - 75711847 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAAGTAA-CCAAGCTTTATTTACA-TGGACAATTCAAACAAAATATGATTTGATCAACAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--GTACT--CAGTTTGAGCATTACCTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13621856 169 - 18804593 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAAGTAA-CCAAGCTTTATTTACA-TGGACAATTCAAACAAAATATGATTTGATCAACAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--GTACT--CAGTTTGAGCATTACCTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13233340 169 + 18905526 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAAGTAA-CCAAGCTTTATTTACA-TGGACAATTCAAACAAAATATGATTTGATCAACAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGGAGCCTCTG--GTACT--CAGTTTGAGCATTACCTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60061943 169 - 72318688 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAAGTAA-CCAAGCTTTATTTACA-TAGACAATTCAAACAAAATATGATTTGATCAACAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--GTACT--CAGTTTGAGCATTACCTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 399312 169 - 1517660 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAACTAA-CCAAGCTTTATTTACA-TGGACAATTCAAACAAAATATGATTTGATCAACAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--GTATT--CAGTTTGAGCATTACCTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495797 169 + 6513552 TGATTGTTTCAGTGACCATAAGAGATATTAAAATCACCAATAGCAAGTAA-CCAAGCTTTATTTACA-TGGACAATTCAAACAAAATATGATTTGATCAACAATGACCTATGCTGAGGAGCAAA---TGCACACATCACGAAGCCTCTG--GTACT--CAGTTTGAGCATTACCTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105263469 164 + 117903854 TGATAGTTTCAGTGACCATGAGATACATCAGAATCACCAATAGCAAGTAA-CCAAGGTATATCTTTA-TGAGCAATTCAAACAAAATATAATGTGATCAATAATGACCTATGCTGAGGAGCAAA---TGCACACATCATGAAGCCTCTG--TTGTT--CAGTTTGAAGATTA-----C i calJac3.chr13 I 309 C 0 s saiBol1.JH378121 19452099 164 - 31320352 TGACAGTTTCAGTGACCATGAGATACATCAGAATCACCAATAGCAAATAA-CCAAGGTATATCTTTA-TGGACAATTCAAACAAAATATTATTTGATCAATAATGACCTATGCTGAGGAGTGAA---TGCACACATCATGAAGCCTCTG--TTATT--CAGTTTGAGGATTA-----C i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647650 164 + 2203405 TGATAGTTTCAGTGACCATGAGATATATCAGAATCACCAATAGCAAGTAA-CCAAGGTATATCTTTA-TGGACAATTCAAACAAAATATAATTTGATCAATAATGACCTATGTTGAGGAGCGAT---AGCACACATCATGAAGCCTATG--TTACT--CAGTTTGAGGATTA-----T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3599454 164 - 14941987 TGATAGTTTCAGTGACCATAAGATACATCAGAATCACCAATAGCAAGTAA-CCAAGGTATACCTTTA-TGGACAATTCAAACAAAATATAATTTGATCAGTAATGACCTATGCTGAGGAGTGAA---TGCACACATCATGAAGCCTCTG--TTATT--CAGTTTGAGGATTA-----T i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228778 163 - 20685099 ---TGTTTTCAGTGACCATAAGAGATATTATAGTGACCAGCAGCAAATAA-CCAACATTTATCTTTA-TTAAAAATCTTGACAAAATATGATTTGATCAATAATAACTTATGCTCAGGAGATGACCCTTCTGTCATCATGAAGTTCTTG----------AACTTGGAGGTTGCTTTTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112306313 168 - 122678785 --AATATTTCAATGACTATGAGAGATATCATAGTTA-TAATAGCAAGTAA-CCTAGGTTTGTCTTTACTGAAAAACTTGGGTAAAATAATATTTAGTCAGTAATGATCTGTGCTCAGGAGAGGA---TGGATACATTATGAATCCTCTAAATTATT--TAATTTGGAAGTTA-CTCTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 478395 170 - 2150887 -GAATATTTTGGTAACTCTAAGAGATATCATAATCACTAATACAAAGCAATTTAATGTTCACTTTTA-ATTAAAATTAGGACAAAACATTATTATATCAATAATAATCTGTGTTCAGGAGAGGA---TGGATACTTTGTGGTGCCCTTA--ACTTTAGCAACTTGAGATTCG-CTTTT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111839486 892 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=5717524.000000 s hg38.chr18_GL383571v1_alt 132275 438 + 198278 ATATTTCTATGAAAGAT-AAAAAA--TAACTAGAAAACAAG-G--GCAAAACTA----ATGATGAGAACTGGGATCCATCCTCCTCTTTTACATTAAGTGTCCCAGTTCTTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGGTA-CATTAGCATATCAAAAACCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGAGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTGCAGTCAAATAAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCTGTCGTTTCAAGAAA----CTTGAGAAATAATGA s panTro5.chr18 65042306 438 + 78221452 ATATTTCTATGAAAGAT-AAAAAA--TAACTAGAAAACAAG-G--GCAAAATTA----ATGATGAGAACTGGGATCCATCCTCCTCTTTTACATTAAGTGTCCCAGTTCTTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGGTA-CATTAGCATAACAAAAACCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGAGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTGCAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCTGTCGTTTCAAGAAA----CTTGAGAAATAATGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161393 438 + 77229886 ATATTTCTATGAAAGAT-AAAAAA--TAACTAGAAAACAAG-G--GCAAAATTA----ATGATGAGAACTGGGATCCATCCTCCTCTTTTACATTAAGTGTCCCAGTTCTTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGGTA-CATTAGCATATCAAAAACCTTCCAACGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGAGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTGCAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCTGTCGTTTCAAGAAA----CTTGAGAAATAATGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5380920 438 + 17472758 ATATTTCTATGAAAGAT-AAAAAA--TAACTAGAAAACAAG-G--GCAAAGTTA----ATGATGAGAACTGGGATCCATTCTCCTCTTTTACATTAAGTGTCCCAGTTCTTTACTGATAGT--GACAGTA-ATTTCAATGATGCTTGTTTAACTGGAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGGTA-Cattagcatatcaaaaaccttccaaagtgtcttt-ggagtttttatttt--ct------tttatctgcagg--tttTCTCTGTTTGGAAGAGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTGCAGTCAAATGAAAAACTGATGAA---TAATATCCAGGGGGGCACTGCTAGTAAGA-CAACCCTGTCGTTTCAAGAAA----CTTGAGAAATAATGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139421337 435 - 152096393 ATATTTCTATGAAAGAT-AAAAAA--TAACTAGAAAACAAG-G--GCAAAGT-------TGATGAGAACTGGGATCCATCCTCCTCTTTTACATTAAGTGTCCCAGTTCTTTACTGATAGT--GACAGTC-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGGGAATAGTTA-TATTAGCATATCAAAAGCCTTCCAAACTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGAGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGAAGTGCAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCTGTCGTTTCAAGAAA----CTTGAGAAATAATGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371409 434 + 70235451 ATATTTCTATGAAAGAT-AAAAAA--GAACGAGAAAATAAG-G--GCAAAGTTA----ATGATGAGAACTGCAATCCATCCTCCTCTTTTACATTAAGTGTTCCAGTTATTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTC----TGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAGCCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGCAGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTACAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAGGA-CAACCCCGTCGTTTCAAGAAA----CTTGAGAAACAATGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63062811 434 - 75711847 ATATTTCTATGAAAGAT-AAAAAA--GAACGAGAAAATAAG-G--GCAAAGTTA----ATGATGAGAACTGCAATCCATCCTCCTCTTTTACATTAAGTGTTCCAGTTATTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTC----TGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAGCCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGCAGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTACAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAGGA-CAACCCCGTCGTTTCAAGAAA----CTTGAGAAACAATGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622025 434 - 18804593 ATATTTCTATGAAAGAT-AAAAAA--GAACGAGAAAACAAG-G--GCAAAGTTA----ATGATGAGAACTGCAATCCATCCTCCTCTTTTACATTAAGTGTTCCAGTTATTTACTGATAGT--GACAATA-ATTTCAAGGATGCTTGTATAACTGGAGTC----TGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTCTGAATAGTTA-Cattagcatatcaaaagccttccaaagtgtctttgggagtttttatttt--ct------tttatctgcagg--tttTCTCTGTTTGGAAGCAGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTACAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCCGTCGTTTCAAGAAA----CTTGAGAAACAATGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13233509 438 + 18905526 ATATTTCTATGAAAGAT-AAAAAA--GAACGAGAAAACAAG-G--GCAAAGTTA----ATGATGAGAACTGCAATCCATCCTCCTCTTTTACATTAAGTGTTCCAGTTATTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGCAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAGCCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGCGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTACAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCCTTCGTTTCAAGAAA----CTTGAGAAATAATGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062112 438 - 72318688 ATATTTCTGTGAAAGAT-AAAAAA--GAACTAGAAAACAAG-G--GCAAGGTTA----ATGATGAGAACTGGGATCCATCCTCCTCTTTTACATTAAGTATTCCAGTTATTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAGCCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGCGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTGCAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAACCCCGTCGTTTCAAGAAA----CTTGAGAAATAATGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 399481 438 - 1517660 ATATTTCTATGAAAGAT-AAAAAA--GAACGACAAAACAAG-G--GCAAAGTTA----ATGATGAGAACTGCAATCCATCCTCCTCTTTTACATTAAGTGTTCCAGTTATTTACTGATGGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGCAGTCTGTTTGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAGCCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTTTCTCTGTTTGGAAGCGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTACAGTCAAATGAAAAACTGATGAA---TAATATCCA-GAGGGCACTGCTAGTAAGA-CAACCCCGTCGTTTCAAGAAA----CTTGAGAAATAATGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3495966 438 + 6513552 ATATTTCTATGAAAGAT-AAAAAA--GAACTAGAAAACAAG-G--GCAAAGTTA----ATGATGAGAACTGGGACCCATCCTCCTCTTTTACATTAAGTGTTCCAGTTATTTACTGATAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTTTGAATGGATATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAGCCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG--TTCTCTCTGTTTGGAAGCGGTT-----GGTAAGAAGTGTATCTTGGGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATCAC-AGGAGTGCAGTCAAATGAAAAACTGATGAA---AAATATCCA-GAGGGCACTGCCAGTAAGA-CAACCCCGTCGTTTCAAGAAA----CTTGAGAAATAATGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105263633 432 + 117903854 ATATTTCTGTGAAAGATAAAAAAA--GAACTAGAAAACAAG-T--GCAAACTTA----ATATTGAGAACTCGGATCCATCCTCCTCTTTTGCATTAAGTGTCCCAGTTCTTTACTGAAGGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTAGGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CTTTAGCATATCAAAAACCTTCCAAAGTATCTTTGGGAGTTTGTGTTTT--CT------TTTATCGGCAGG--TTTTTCCTGTTTGGAAGAG------------AAAAGTGTATCTTGAGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATTAC-AGGAGTGTGGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGG-CAATCCTGTTGTTTCAAGAAA----CTTGAGAACCAATGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19452263 424 - 31320352 ATATTTCTAAGAAAGAT-AAAAAA--GAACTAGAAAACAAG------------A----ATGTTGAGAACTGGGATCCATCCTCCTCTTTTGCATTAAGTGTCCCAGTTCTTTATTGAAAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTAGAAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAACCTTCCAAAGTGTCTTTGGGAGTTTTTGTTTT--CT------TTTATCTGCAGGTTTTTTTTCTGTTTGGAAGAG------------AAAAGTGTATCTTGAGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATTAC-AGGAGTGCAGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-CAATCCTGTTGCTTCAAGAAA----CTTGAGAACCAATGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1647814 423 + 2203405 GTATTTCTATGAAAGAT-GAAAAA--GAACTAGAAAACAAG------------A----ATGTTGAGAACTGGGATCCATCCTCCTCTTTTGCATTAAGTGTCCCAGTTCTTTACTGAAAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGTAGAAATGGGTATGAGTCTCT-------------------------------------ACGCTGAATGGTCTC-----TAAAA-GCTTTGGATAGTTA-Cattagcatatcaaaaaccttccaaagtgtctttaggagtttttgtttt--ct------tttatctgcagg-tttTTTTCTGTTTGGAAGAG------------AAAAGTGTATCTTGAGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATTAC-AGGAGTGTGGTCAAATGAAAAACTGATGAA---TAATATCCA-GGGGGCACTGCTAGTAAGA-TAATCCTGTTGTTTCAAGAAA----CTTGAGAACCAATGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3599618 432 - 14941987 ATATTTCCATGAAAGAT-AAAAAA--GAACTAGAAAACAAA-T--GGAAACTTA----ATGTTGAGAACTGGGATCCATTCTCCTCTTTTGCATTATGTGTCCCAGTTCTTTACTGAAAGT--GACAGTA-ATTTCAAGGATGCTTGTTTAACTGGAGTCTGCAGGAATGGGTATGAGTCTCT-------------------------------------ATGCTGAATGGTCTC-----TAAAA-GCTGTGAATAGTTA-CATTAGCAGATCAAAAACCTTCCAAAGTGTCTTTGGGAGTTTTTATTTT--CT------TTTATCTGCAGG-TTTTTTTCTGTTTGGAAGAG------------AAAAGTGTATTTTGAGATCTGAGTTTTATTTCAAGGTTATTGAAGT---ATTAC-AGGAGTGTGGTCAAATGAAAAACTGATGAA---TAATATCAA-GGGGGCACTGCTAGTAAGA-AAATCCTGTTGTTTCAAGAAA----CTTGAGAACCAATGA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11228941 487 - 20685099 GTCTTTTCATGAAAGAT-AAAAAAAGGAACTAGGAAACAGG-G--AAAAAAT-A----CTGATGAGAGTTGGGATCTG---TCTTCTTTTGCTTTAACTACCTCAGTTCTTTACTGAGAGT--GAGAGTT-CTTTCTGGGATGCCAGTTTAACTGAAATCTGTTGGAGTGGGTATGCATGTCTATTACATTATTTTACACAACGAATCTAAGTCTATAAAATGCGGAAAGATCTCAATTATGAAA-GCTGTGAATAGTTA-CATTAGCATATCAAAAACTTTCCAAAGAGTCTTTGGGAGTTTTTTTCTC--CCCTCCCATTTACCTGCAAG--TTTTC----TGTGGAAGAGCCCAATAAGGCAAATAGTGTATCTTGGAATCTGAG-TTTATTTCAA-GTTATTGAAGTCTCATCCC-AGGAGGGCAGTCAAATGGGAAGCTGATGAA---TAATAGCCA-GAGGGCACTTTTCACAAGATTAACCTTGTGGTTTCAAGAAA----CATCAGAAATCATGA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111840378 433 + 195471971 ACACTCCCATGAATGAT---AAAA--TAATAAAAAAATAAG-TC-ATATAATTAAGACATTAAGACACCTGGGGCTTAT-----TTCTTTATATTAAG----CCAGTTC-TTATTGAAAGC----CTATATACTTTAAGGCTTCTTATTTAACTGGAGTCTCTTTGAA--GCAATGAGATTAG-------------------------------------GTGTCTAATGTTCTA-----TAAAAGGGTGTGAACAGTT--CATTAGCATATCATAAATGTTCCAAAGTGTCTTTGAGAGATGTCTTTTTAACA------TTTATCTGCAAG--TTTCCTAT-TTTGGAAAAGACT-----GGGAAGAGCTGTATCCTGGGATCTGGGCTTTATTTCAAGGTCCACAAAAC---ATCAC-GAGAGTGCAGTCAAAAGTAAAGCTAATGAA---TAATGTCAG-GATGGCACTGCTTGCAAGA-TAACCCTGACATTTCAAAAAAAAAGTTTGAAAAGTAATGG i mm10.chr1 I 892 C 0 s canFam3.chr1 112306481 418 - 122678785 TCTTTTCTATGGAAGAT-AATAAA--GAACTAGGAACAAAA-GTGGCAAAGTTA----ATGATGAAATCTGGGATTTATCCTCTT--TTTGCATTAATTGTCCAAGTTCTTTACTGAAAGT--GAGAG-A-ATACCAAAGATGTTTGTGTAAGTGGAGTCCGTTTGAATTGGTCTGGGTCTCC-------------------------------------ATGCTGAATAGTCTC-----TATAA-ACTGTGATTACATATTATTAACATACCAAAAATCTTCCAAA----------------TTATTTT--CT------TTTAT-TGCAGA--TTTTCTCT----GGAAGAAGCT-----AGTAAGGAGTGTATCTTGTGATATGAGTTTTATTTCAAGGTTATTGAAGA---ATCACAAGGAGTGCAGTCAAATGGAAAACTGATGAA---TAATATCCA-GAGGGCACTGCTAGCAAGA-TAACCCCATTGTTTTAAGACA----CTTGAAAAATGATGG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 478565 438 - 2150887 ATAGTTCTATGAAAGAT-AAAAAG--GACTGGGGGAAAAAGTG--ACAAAATTA----ATGACAAGATCTGGGAATTATCCT--TCTTTTGCATTAAGTGTCCCAGTTCTTTACTGAAAGCTAAAGAGTA-CTTTCAAGGATGCTTCTTTACCTGGAGACTGTTTGAATGTGTGTGGGGCTCT-------------------------------------ATGCTGAATGGTCCC-----TAAA--GCTGTGAATAGTTA-CATTAGCATATTAAAAGCCTTCCAAAGTGTCTTTGAGAGATGT--TTTT--CT------CTTATCTGAAGG--TATTTTCTGTTTGGAAGAGGTT-----AGTAAGGAGTAAATCCTGGGATCTGAG-TTTATTTCAGAGTTGTTGAAAT---ATCAC-AGAAGTGCAGTCAAATGGAAAACTGATGAACAGTAGTATCCA-GAGAGCACTTCTAGCAAGA-CAACCCTATATTTTCAAGCAA----TTTGAGAAGTAATAA i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1430925.000000 s hg38.chr18_GL383571v1_alt 132713 128 + 198278 TAAAGAAACA-----TTTT--TTTGAGTTTGTTACTAGTGAGAATAA------ATTTTGACAGAATAGACAACTTGTTTTTCTACGTC--TGACTATAAATTGTAGATTTCCAATATTCCAATTCATAATGAATGC-CTATCAT s panTro5.chr18 65042744 129 + 78221452 TAAAGAAACA----TTTTT--TTTGAGTTTGTTACTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTGTTTTTCTACGTC--TGACTATAAATTGTAGATTTCCAATATTCCAATTCATAATGAATGC-CTATCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161831 130 + 77229886 TAAAGAAACA---TTTTTT--TTTGAGTTTGTTACTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTGTTTTTCTACGTC--TGACTATAAATTGTAGATTTCCAATATTCCAATTCATAATGAATGC-CTATCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381358 128 + 17472758 TAAAGAAACA-----TTTT--TTTGAGTTTGTTACTAGTGAGAATAA------ATTATGACAGAATAGTCAACTTCTTTTTCTACGTC--TGACTATAAATTGTAGATTTCCAATATTCCAATTCATAATGAATGC-CTATCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139421772 128 - 152096393 TAAAGAAATA-----TTTT--TTCGAGTTTGTTACTAGTGAGAATAA------ATTTTGACATAATAGTCAACTTCTTTTTCTACGTC--TGACTATAAATTGTAGATTTCCAATATTCCAATTCATAATGAATGC-CTATCAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371843 128 + 70235451 TAAAGAAACA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTT--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063245 128 - 75711847 TAAAGAAACA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTT--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622459 128 - 18804593 TAAAGAAATA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTT--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13233947 128 + 18905526 TAAAGAAACA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTC--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062550 128 - 72318688 TAAAGAAACA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTT--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 399919 128 - 1517660 TAAAGAAACA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTT--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3496404 124 + 6513552 T----AAACA-----TTTT--TTCGAGTCTGTTGCTAGTGAGAATAA------ATTTTGACAGAATAGTCAACTTCTTTTTCTACGTT--TGACTATAAATTGTACATTTCCAATATTCCACTTCACAATGAATGC-CTATCAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264065 130 + 117903854 TAAAGAAAC---TTTTTTT--TTCAAGTTTGTTGCTAGTGAGAATAA------ATTTTGACAGAATACTCAACTTGTTTTTCTAAGTT--TACCTATAAACTGTAGATTTCCAATATTCCAGTTCACAATGAATGA-CTATGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19452687 133 - 31320352 TAAAGAAACATTTTTTTTT--TTCAAGTTTGTTGCTAGTGAGAATAA------ATTTTGACAGAATACTCAACTTGTTTTTCTAGGTT--TACCTATAAACTGTAGATTTCCAATATTCCAATTCACAATGGATGT-CCATCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648237 133 + 2203405 TAAAGAAACTTTTTTTTTT--TTCAAGTTTCTTGCTAGTGAGAATAA------ATTTTGACAGAATACTCAACTTGTTTTTCTAAGTT--TACCTATAAACTGTAGATTTCCAGTATTCCAATTCACAATGAATGT-CTATCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600050 131 - 14941987 TAAAGAAACA--TTTTTTT--TTCAAATTTGTTGCTAGTGAGAATAA------ATTCTGACAGAATACTCAACCTGTTTTTCTAAGTT--TACCTATAAACTGTAGATTTCCAATATTCCAATTCACAATGAATGC-CTATCAT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111840811 132 + 195471971 GAAAGATATA---TTTTTT--ATCTATTTTCTGGCTAGTATGAATAA------ATTCTGACAGAAATCTCATTTTTTCTTTCCAAGTTTATAAGTACATGTGGTAGATTTCCAACCATACAATTCATAATACATAG-CCAACAC i mm10.chr1 C 0 C 0 s canFam3.chr1 112306899 134 - 122678785 TAAGGAATCA-----TTTCAAATCTAGTTTGGTGTTAGTGAGAATAAAAATATATTTCAAAAGACAA--CCACTCTTTTATCCTAGTT--TAACTATAAATTGTAGATTTGTAACCTTCCAATTCACAATGAATAC-CTATCAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 479003 130 - 2150887 ---TGAAACA---TTTTTA--TTCTATTTTGTTGCTAGTGAGAATAA-AAAATATAGTGATGGAA-AGTC--CTCATTTGTCCAAGTT--TAGCTATATATTATAGATTTATAACCTTCTAATTCACTATGTATACATTATCAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e otoGar3.GL873546 11229428 0 - 20685099 C a score=1173104.000000 s hg38.chr18_GL383571v1_alt 132841 105 + 198278 TTTGTAGTACTAAGCTCTTATGTTCAAGAAATATCTAAAC--TTTAAACACAAAATTATTGTCtaaaataaaa--taatgtaatataaaataaaTCCAAGATCATTTAA s panTro5.chr18 65042873 105 + 78221452 TTTGTAGTACTAAGCTCTTATGTTCAAGAAATATCTAAAC--TTTAAACACAAAATTATTGTCtaaaataaaa--taatgtaatataaaataaaTCCAAGATCATTTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64161961 105 + 77229886 TTTGTAGTACTAAGCTCTTATGTTCAAGAAATATCTAAAC--TTTAAACACAAAATTATTGTCtaaaataaaa--taatgtaatataaaataaaTCCAAGATCATTTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381486 105 + 17472758 TTTGTAGTACTAAGCTCTTATGTTCAAGAAATATCTAAAC--TTTAAACACAAAATTATTGTCtaaaataaaa--taatgtaatataaaataaaTCCAAGATCATTTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139421900 105 - 152096393 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATATCTAAAC--TTTAAACACAAAATTATTGTCtaaaataaaa--taatgtaatataaaataaaGCGAAGACCATTTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57371971 105 + 70235451 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063373 105 - 75711847 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622587 105 - 18804593 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234075 105 + 18905526 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062678 105 - 72318688 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400047 105 - 1517660 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3496528 105 + 6513552 TTTGCAGTACTAAGCTCTTATGTTCAAGAAATACCTAAAC--TTTAAACACAAAATTGTTGTCtaaaatagaa--taatgtaatataaaataaaTCCAAGACCATTTAA i colAng1.NW_012115433v1 C 0 I 323 s calJac3.chr13 105264195 103 + 117903854 TTTGCAGTGCTAAGCCCTTCTGTTCAATAAATATCTAGAT--TTTAAACACAGATTTGTTGTCtaaaataaaa--taatgta--ataaaataaattCAAGACCATTTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19452820 103 - 31320352 TTTGCAGTACTAAGCCCTTCTGTTCAAGAAATATCTAGAG--TTTAAACACAGATTTGTTATCtaaaataaaa--taatgta--ataaaataaattCAAGACCATTTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648370 103 + 2203405 TTTGCAGTACTAAGCCCTTCTGTTCAAGAAATATCTAGAC--TTTAAACACAGATTTGTTGTCtaaaataaaa--taatgta--ataaaataaattcaagaataTTTAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600181 103 - 14941987 TTTGCAGTACTAAGCCCTTCTGTTCAAGAAATACCTAGAC--TTTAAACACAGATTTGTTGTCtaaaataaaa--taatgta--ataaaataaaTTCAAGACCATTTAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229428 102 - 20685099 TCTGCAGAGCTAAGCCCTCATGTTCAAGAAATATTTAGACTTTTTAAAGACATATTTGTTGCATAAAATAAAA--TAATGTA-----ACATATATTCAAAACCATTTAA i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111840943 93 + 195471971 TTTACAG----AAGATCTAATGTACATAAAAC-TCTAGAT--TTTATACTAAGATTTGT-------AATAAAAGTTATTGTAAAATAAAATCCATGCAAAACCACTT-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112307033 26 - 122678785 -----------------------------------------------------------------------------------TTTAAAATACATTTAAGACCACTTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 479133 102 - 2150887 TTCACAGTGATAAGATCATATATTCAAGAGATATTTAGTC-ATTAAAACACCATTTTGCTGTCTAAAATA-----TAATATGA-AAAAAATACATTCATGCTCATTTta i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=16511.000000 s hg38.chr18_GL383571v1_alt 132946 1 + 198278 G s panTro5.chr18 65042978 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162066 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381591 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422005 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372076 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063478 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622692 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234180 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062783 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400152 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3496956 1 + 6513552 G i colAng1.NW_012115433v1 I 323 C 0 s calJac3.chr13 105264298 1 + 117903854 G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19452923 1 - 31320352 G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648473 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600284 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229531 1 - 20685099 A i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111841036 1 + 195471971 G i mm10.chr1 C 0 C 0 s canFam3.chr1 112307059 1 - 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 479235 1 - 2150887 g i dasNov3.JH575754 C 0 I 737 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=177951.000000 s hg38.chr18_GL383571v1_alt 132947 20 + 198278 ATATTCATGTC-----TTTTTGTTC--- s panTro5.chr18 65042979 20 + 78221452 ATATTCATGTC-----TTTTTGTTC--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162067 20 + 77229886 ATATTCATGTC-----TTTTTGTTC--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381592 20 + 17472758 ATATTTATGTC-----TTTTTGTTC--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422006 20 - 152096393 ACATTCATGTC-----TTTTTGTTT--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372077 18 + 70235451 ATATTCATGTC-------TTTGTTT--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063479 18 - 75711847 ATATTCATGTC-------TTTGTTT--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622693 18 - 18804593 ATATTCATGTC-------TTTGTTT--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234181 18 + 18905526 ATATTCATGTC-------TTTGTTT--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062784 18 - 72318688 ATATTCATGTC-------TTTGTTT--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400153 18 - 1517660 ATATTCATGTC-------TTTGTTT--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3496957 18 + 6513552 ATATTCATGTC-------TTTGTTT--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264299 20 + 117903854 ACATTCATGTC-----TTTTTGTTT--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19452924 25 - 31320352 ATATTCATGTCTTTTTTTTTTTTTT--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648474 20 + 2203405 ATATTCATGTC-----TTTTTGTTT--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600285 20 - 14941987 ATATTCATGTC-----TTTTTGTTT--- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229532 21 - 20685099 ATATATGTGTT-------TTTGTTTAAC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111841037 19 + 195471971 GTTATAATGTG------CCTTGTTT--- i mm10.chr1 C 0 C 0 s canFam3.chr1 112307060 20 - 122678785 ACATTTGTGTA-----TTTTTGTTT--- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 479236 737 - 2150887 I a score=970132.000000 s hg38.chr18_GL383571v1_alt 132967 75 + 198278 AATAGTGGGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAGTAAGAAA s panTro5.chr18 65042999 75 + 78221452 AATAGTAGGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAGTAAGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162087 75 + 77229886 AATAGTAGGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAGTAAGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381612 75 + 17472758 AATAGTAGGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAGTAAGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422026 75 - 152096393 AATAGTAGGCTTTAGAGTAACTTTCAGGAGGTTT---TCCTACACTAATTTTGTTATTAACAATGTGCCAATAAGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372095 75 + 70235451 AACAGTAAGCTTTGGAGTAACTTTCAGGAGATTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAATAAGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063497 75 - 75711847 AACAGTAAGCTTTGGAGTAACTTTCAGGAGATTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAATAAGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622711 75 - 18804593 AACAGTAAGCTTTGGAGTAACTTTCAGGAGATTT---TCCCATACTAATTTTGTCATTAACAATGTACCAATAAGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234199 75 + 18905526 AACAGTAAGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAATAAGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062802 75 - 72318688 AACAGTAAGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAATAAGAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400171 75 - 1517660 AACAGTACGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAATAAGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3496975 75 + 6513552 AACAGTAAGCTTTGGAGTAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGTCAATAAGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264319 75 + 117903854 AATAGTAAGCTTCAGGGGAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAACAATGTGCCAATAAGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19452949 75 - 31320352 AACAGTAAGCTTTGGGGGAACTTTCAGGAGGTTT---TCCCATACTAATTTTGTCATTAATAGTGTGCCAATAAGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648494 75 + 2203405 AACAGTAAGCTTCGGGGGAACTTTCAGGAGGTTT---TCCCAAACTAATTTTGTCATTAACAATGTGCCAGTAAGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600305 75 - 14941987 AATAGTAAGCTTCGGGGGAACTTtcaggaggttt---tcccatactaattttgtcattaacaatatgccaataagaaa i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229553 73 - 20685099 AACAGTAAGCATTGG-GTAATTTTCAGGATGTTT---CCCCATGGTAATTTACTCATTCACAATGTGCCA-TAGGAAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111841056 73 + 195471971 AACTGTAATTACTGGAGCAATTTCCAAACATCTTGTATCTCATG-----TATGTCATTAACAACATGCCAATCAAAAA i mm10.chr1 C 0 I 11805 s canFam3.chr1 112307080 75 - 122678785 AATAGAAAGTATTTGGGTAATTTTAAGGATGATT---TTACATACCAATTTTACACATGACAATGTACCACTTGGAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 479973 75 - 2150887 AAAAGTAAACTTCGGGGTAAATTTCAGGATGATT---TCACATGCCCATGTTGTGATTAACTATATTTCCACAGAAAA i dasNov3.JH575754 I 737 C 0 e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1736407.000000 s hg38.chr18_GL383571v1_alt 133042 184 + 198278 GGTCACTTATGTTATCTAGGTATAATTTTCTGCATACCCAGACTAGTTGATGACA------------------AAAGTTCTTTCTTC--TTGTAGATTGTCTGTT----------------------ATCTACTATTG------------TCTA-----------ATAAATTGAAAATTC-CT-----------------TTGTATAAAGATAT------------ACACATTAATAAATACATACACACAA--AAAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAG s panTro5.chr18 65043074 184 + 78221452 GGTCACTTATGTTATCTAGGTATAATTTTCTGCATACCCAGACTAGTTGATGACA------------------AAAGTTCTTTCTTC--TTGTAGATTGTCTGTT----------------------ATCTACTATTG------------TCTA-----------ATAAATTGAAAATTC-CT-----------------TTGTATAAAGATAT------------ACACATTAATAAATACATACACACAA--AAAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162162 184 + 77229886 GGTCACTTATGTTATCTAGGTATAATTTTCTGCATACCCAGACTAGTTGATGACA------------------AAAGTTCTTTCTTC--TTGTAGATTGTCTGTT----------------------ATCTACTATTG------------TCTA-----------ATAAATTGAAAATTC-CT-----------------TTGTATAAAGATAT------------ACACATTAATAAATACATACACACAA--AAAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381687 183 + 17472758 GGTCACTTATGTTTTCTAGGTATAATTTTCTGCATACCCAGATTAGTTGATGATG------------------AAAGTTCTTTCTTC--TTGTAGATTGTCTGTT----------------------ACCTACTATTG------------TCTA-----------ATAAATTGAAAATTC-CT-----------------TTGTATAAAGATAT------------ACACATTAATAAATACATACACAC-A--AAAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422101 180 - 152096393 GGTCACTTATGTTATCTAGGTATAATTTTCTGCATACCCAGACTAGTTGATGACA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGTT----------------------ATCTACTATTG------------TCTA-----------ATAAATTGAAAATTC-CT-----------------TTGTATAAAGATAT------------ACAAATTAAT--ATACACACATAC----AAAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372170 181 + 70235451 GGTCACTTATGTTATCTAGGTATAATATTCTGCATATCCAGACTAGGTGATGACA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------TAGTGTAAACATAT------------ACA----AATAAATACACACAAAAAC-TATAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063572 181 - 75711847 GGTCACTTATGTTATCTAGGTATAATATTCTGCATATCCAGACTAGGTGATGACA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------TAGTGTAAACATAT------------ACA----AATAAATACACACAAAAAA-TATAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622786 181 - 18804593 GGTCACTTATGTTATCTAGGTATAATATTCTGCATATCCAGACTAGGTGATGACA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------TAGTGTAAACATAT------------ACA----AATAAATACACACAAAAAA-TATAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234274 181 + 18905526 GGTCACTTATGTTATCTATGTATAATATTCTGCATATCCAGACTAGGTGATGGCA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------TAGTGTAAACATAT------------ACA----AATAAATACACACAAAAAA-TATAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60062877 181 - 72318688 GGTCACTTATGTTATCTAGGTATAGTATTCTGCATATCCAGACTGGGTGATGACA------------------AAAG----TTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------TAGTGTAAACATAT------------ACAAATTAATAAATACACACAAAAAA-TACAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400246 181 - 1517660 GGTCACTTATGTTATCTAGGTATAATATTCTGCATATCCAGACTAGGTGATGACA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------CAGTGTAAACATAT------------ACA----AATAAATACACACAAAAAA-TATAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3497050 185 + 6513552 GGTCACTTATGTTATCTAGTTATAATATTCTGCATATCCAGACTAGGTGATGACA------------------AAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATTG------------TCTA-----------ATAAATTAAAAAGTC-CT-----------------TAGTGTAAACATAT------------ACAAATTAATAAATACACACAAAAAA-TATAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CTCAGAGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264394 203 + 117903854 CGTCGCTTATGTTATCCAGGTATTATTTTCTGCATACACAGTCTAGGTGATCACAAAGATTCCTTTGTACTCTAAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATAG------------TATA-----------ATAAATTGAAAACTCATC-----------------TAGTATAAAGATAT------------ACAAATTAATAAATACACACAAATAAATACAAGTG-------------------------------------GAAAATC-A--A----------------------------------------------------CACAGAGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19453024 204 - 31320352 CATCAGTTATGTTATCTAGGTATAATTTTCTGCATACGCAGTCTATGTGATCACAAAGATTCCTTCGTACTCTAAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTACAG------------TATA-----------ATAAATTGAAAACTC-TT-----------------TAGTATAAAGATAT------------ACAAATTAATAAATACACACAAATAAATACAAATG-------------------------------------GAAAATC-GACA----------------------------------------------------CACAGAGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648569 200 + 2203405 CGTCACTTATGTTATATAGGTATAATTTTCTGCATACGCAGTCTAGGTGATCACAAAGATTCCTTCGTACTCTAAAGTTCTTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATAG------------TATA-----------ATAAATTGAAAACTC-TT-----------------TAGTataaagatat------------acaaattaataaat----acaaataaatataaaTG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600380 204 - 14941987 agtcacttatgttatctaggtataattttctgcatacgcagtctaggtgatcacaaagattccttcgtactctaaaattctTTCTTC--TTGAAGATTGTCTGCT----------------------ATCTACTATAG------------TATA-----------ATAAATTGAAAACTC-TT-----------------TAGTATAAGGAAAT------------ACAAATTAATAAATGCACACAAATAAATACAAATG-------------------------------------GAAAATC-AACA----------------------------------------------------CACAGAGAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229626 216 - 20685099 CATTACTTATGTTACCTAGGGATAATTTTCTGCAGAGGCAGAAAAGGTGATTACAAAGATTTCCACCAGCTCTGAAGTTCTTTCTCC--TTAAAGTACGTCCACT----------------------ATTTGCTATTG------------TCAA-----------Gtaaataaataaata-tttattcttaataaataaatattattaaGGTAG------------ACAAGTTAATAAATGCATTTGAACAATTATAAATA-------------------------------------GAAAATG-AACA----------------------------------------------------CATA----- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112307155 304 - 122678785 GATCACCTATGTTACCTGGGTATTATTTTTTGTATAGCCAgactaggtgatcacagagatttcttccaattctaaaattATTTCTCCAGTTGAACA----CTATT----------------------ATTTACTGTTG------------TCTA-----------G-AAATTAAAAACTC-CT--AACCTGATAAAGTT-AAGCCCTAAGATAC------------ACAAATTCATAAATATACACAAAATAATATAAATGAAAATGTGAATAAACATGTACTCATCAATCAACTGAAGAAAACA-AACATGTTTTTTTAATAAATTCttttttttttaaatttttatttatttatgatagtcacagagag i canFam3.chr1 C 0 I 152 s dasNov3.JH575754 480048 254 - 2150887 GCTCACATACAGTATTTAAGCATAATTTTCTACATATATAAAATACCTGATTTAA-CTTTTCCTTCCAAATCTAAAGTT-TTTATCA--TTGAAGATTGTCCACTTACAAGATAAAACAGTCTTAAAATATACAAATGATACAACCGAATTATACACTTGAAAGTATAAAATAGAAAATT-TT-----------------AAAT-TGAATATATGGTGGTACaataaaaaattgttaaatatatataaaataatataaatG-------------------------------------GAAAAGAGAACA----------------------------------------------------CACA----- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=287045.000000 s hg38.chr18_GL383571v1_alt 133226 27 + 198278 TGTTTCCTCATCATCCGACTT-----AAGAAA s panTro5.chr18 65043258 27 + 78221452 TGTTTCCTCATCATCCGACTT-----AAGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162346 27 + 77229886 TGTTTCCTCATCATCCGACTT-----AAGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381870 27 + 17472758 TGTTTCCTCATCATCCGACTT-----AAGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422281 27 - 152096393 TGTTTCCTCATCATCCGACTC-----AAGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372351 27 + 70235451 TGTGTCCTCATCATGTGACTT-----AAGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063753 27 - 75711847 TGTGTCCTCATCATGTGACTT-----AAGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622967 27 - 18804593 TGTGTCCTCATCATGTGACTT-----AAGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234455 27 + 18905526 TGTGTCCTCATCATGTGACTT-----AAGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60063058 27 - 72318688 TGTGTCCTCATCATGCGACTT-----AAGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400427 27 - 1517660 TGTGTCCTCATCATGCGACTT-----AAGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3497235 27 + 6513552 TGTGTCCTCATCATGCGACTT-----AAGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264597 27 + 117903854 TGTGTCCTCATCATCCTACTT-----AAGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19453228 27 - 31320352 GGTGTCCTCATCATCCTACTT-----AAGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648769 27 + 2203405 TGTGTCCTCATCATCCTACTT-----GAGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600584 27 - 14941987 TGTGTCCTCATCATCCTACTT-----AAGAAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229842 30 - 20685099 --TTTTCTCATCATCCCATTGAGAAAAGAAAA i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 480302 25 - 2150887 --TGTTCTCATCACTGAGCTT-----AAGAAA i dasNov3.JH575754 C 0 I 8 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112307459 152 - 122678785 I a score=3941424.000000 s hg38.chr18_GL383571v1_alt 133253 354 + 198278 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagttagaaacctggaatcttactctttt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaatttaaaaaggggggaaagcatagaaaaaagaaa-------------------a--ccaaattctgcacat--------aaactctaagtcaatctctggcacatccaagaattacatgtgcatgcaacagattccaagcactacttataaagctaaaagatctgaaaacatatctcaattgctgtcaacagtaggg-gact--cagtttgcagtttgtgtttagccatgttaaccttctaaaacaaa s panTro5.chr18 65043285 353 + 78221452 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagttagaaacctggaatcttactctttt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaatttaaaaaggggggaaagcatagaaaaaagaaa-------------------a--ccaaattctgcacat--------aaactctaagtcaatctctggcacatccaggaattacacgtgcatgcaacagattccaagcactacttataaaactaaaagatctgaaaacatatctcaattgctgtcaacagtaggg-gact--cagtttgcagtttgtgtttagccatgttaaccttctaaaac-aa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162373 355 + 77229886 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagttagaaacctggaatcgtactcttttaaaaagaatgagaagacagatgtcaggactaccactgaagttacaaaatttaaaaaggggggaaagcatagaaaaaagaaa-------------------a--ccaaattctgcacat--------aaactctaagtcaatctctggcacatccaggaattacacgtgcatgcaacagattccaagcactacttataaaactaaaagatctgaaaacatatctcaattgctgtcaacagtaggg-gact--cagtttgcagtttgtgtttagccatgttaaccttctaaaac-aa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5381897 344 + 17472758 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACACGGAGCAGCTAAAA--TAGTTAGaaacctggaatcttactctttt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaatttaaaaaggggggaaagcatag-----------------------------a--ccaaattctgcacat--------taactctaagtcaatctctggcacatccaggaattacacgtgcatgcaacagattccaagcactacttataaagctaaaagatctgaaaacatatctcaattgctgtcaacagtaggg-gact--cagtttgcagtttgtatttagccatgttaaccttctaaaacaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422308 370 - 152096393 TATTTTATTTTTGAAAACTTTTGTGGGCTTCTCAGCAAGCTGGCTTAACATGGAGCAgctaaaa--tagttacaaacctgtaatcttactctttt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaatttaaaaaggggggaaagcatagaaaaaagaaa---accatagaagggcagca--ccaaattctgcacat--------aaactctgagtcaatctctggcagattcaggaattacacttgcatgcaactgattccaagcactacttataaagctaaaagatctgaaaacatatctcaattgctgtcaacaataggg-gact--cggtttgcagtttgtgtttagccatgttaaccttctaaaacaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372378 370 + 70235451 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAGGTAAAA--Tagtcagaaacctgtaatcttactctctt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaattcaaaaaggggggaaagcatagaaaaaagaaa---accatacaagggcagccatacaaattctgcatat--------aaactctgactcaatctctggcagatccaggaactggacttgcatgcaacagattccaagcactacttacaaagctaaaagatctgaaaac--atctcagctgctgtcaacaataggg-gact--ccgtttgcagtttgtgtttagccatgctaaacttctaaaacaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63063780 370 - 75711847 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAGGTAAAA--TAGTCAGaaacctgtaatcttactctctt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaattcaaaaaggggggaaagcatagaaaaaagaaa---accatacaagggcagccatacaaattctgcatat--------aaactctgactcaatctctggcagatccaggaactggacttgcatgcaacagattccaagcactacttacaaagctaaaagatctgaaaac--atctcagctgctgtcaacaataggg-gact--ccgtttgcagtttgtgtttagccatgctaaacttctaaaacaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13622994 370 - 18804593 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAGGTAAAA--Tagtcagaaacctgtaatcttactctctt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaattcaaaaaggggggaaagcatagaaaaaagaaa---accatacaagggcagccatacaaattctgcatat--------aaactctgactcaatctctggcagatccaggaactggacttgcatgcaacagattccaagcactacttacaaagctaaaagatctgaaaac--atctcagctgctgtcaacaataggg-gact--ccgtttgcagtttgtgtttagccatgctaaacttctaaaacaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234482 366 + 18905526 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagtcagaaacctgtaatcttactctctt--aaagaatgagaggacagatgtcaggactaccactgaagttacaaaattcaaaaaggggg--aagtttggaaaaaagaaa---accatacaagggcagca--ccgaattctgcatat--------aaactctgactcaatctccggcagatccaggaattggacttgcatgcaacagattccaagcactacttacaaagctaaaagatctgaaaac--atctcagctgctgtcaacaataggg-gact--ccgtttgcagtttgtgtttagccatgctaaacttctaaaacaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60063085 367 - 72318688 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagtcagaaacctgtaatcttactctctt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaattcaaaaaggggg-aaagtttggaaaaaagaaa---accatacaagggcagca--ccaaattctgcatat--------aaactctgactcaatctctggcagatccaggaatgagacttgcatgcaacagattccaagccctacttacaaaactaaaagatctgaaaacgtatctcagctgctgtcaacaataggg-gact--ccgtttgcag--tgtgtttagccatgctaaacttctaaaacaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400454 366 - 1517660 TATTTTTTCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagtcagaaacctgtaatcttactctctt--aaagaatgagaagacagatgtcaggactaccactgaagttacaaaattcagaaaggggg--aagtttggaaaaaagaaa---accatacaagggcagca--ccgaattctgcatat--------aaactctgactcaatctctggcagatccaggaattggacttgcatgcaacagattccaagcactacttacaaagctaaaagatctgaaaac--atctcagctgctgtcaacaataggg-gact--ccgtttgcagtttgtgtttagccatgctaaacttctaaaacaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3497262 370 + 6513552 TATTTTATCTTTGAAAACTTTTGTGGGCTTCTCAGCAAGTTGGCTTAACATGGAGCAgctaaaa--tagtcagaaacctgtaatcttactctctt--aaagaatgagaagacagatgtcaggactactactgaagttataaaattcaaaaaggggggaaagcatagaaaaaagaaa---accatacaagggcagca--ccagattctgcatat--------aaactctgactcaatctctggcagatccaggaattagacttgcatgcaacagattccaagcactacttacaaagctaaaagatctgaaaacatatctcagctgctgtcaacaataggg-gact--ctgtttgcagtttgtgtttagccatactaaacttctaaaacaaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264624 370 + 117903854 TATTTTATCTTTGAAAATCTTTGTGGCCTTCTCAGCAAGTTGGCTTAACATCGAGCAgctaaaa--tagccagaaacctgtaatctgactctctt--aaagaatgagaagacagatgtcagtgctactactgaaattagaaaatttaaaaatgcagaaaagcacagataaaagaaa---atcacagaaggatagca--ccaaattctgcccat--------aaactctgactgaatctctggcagatccagaaactacacttgcatgcaacagattccaagcagtactgacaaagctaaaagaacggaaaatacatctcggctgctgtcaacaataggg-gact--cagtttgcaatttgagtttagccaagtcagccttccaaaacaaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19453255 365 - 31320352 TATTTTATCTTTGAAAATCTTTGTGGCCTTCTCAGCAAGTTGGCTTAACATCGAGCAgctaaaa--tagccagaaacctgtaatctgactctctt--aaagaatgagaagacagatgtcagtgctactactgaaatcagaaaatttttaaatggggaaaagcacag-----agaaa---accacagaaaggtagca--ccaaattctgcacat--------aaactctgactgaatctctggcagatccagaaactacacttgcatgcaacagattccaagcagtactgacaaagctaaaagaactgaaaatacatctcggctgctgtcaacaataggg-gact--cagtttgcaccttgagtttagccaagttaaccttccaaaacaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1648796 361 + 2203405 TATTTTATCTTTGAAAATCTTTGTGGCCTTCTTAGCAAGTTGGCTTAACATCGAGCAgctaaaa--tagccagaaacctgtaatctgactctctt--acagaaagagaagacagatgtcagcgctactactg---------aatttaaaaatgcagaaaagcacagagaaaagaaa---accacagaagggtagca--ccaaattctgcacat--------aaactctgactgaatctctggcagatccagaaactacacttgcatgcaacagattccaagcagtactgacaaagctaaaataactgaaaatacatcttggctgctgtcaacaataggg-gact--cagtttgcactttgagtttagccaagttaaccttccaaaacaaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600611 370 - 14941987 TATTTTATCTTTGAAAATCTTTGTGGCCTTCTCAGCAAGTTGGCTTAACATTGAGCAgctaaaa--tagccagaaacctgtaatctgactctctt--aaagaatgagaagacagatgtcaaggctactaatgaaattagaaaacttttaaatggggaaaatcacagagaaaagaaa---accacagaagggtagca--ccaaattctgcacat--------aaactctgactgaatctctggcagatccagaaactacacttgcatgcaacagattccaagcagtactgacaaagctaaaagaactgaaaatacacctcggctgctgtcaacaataggg-aact--cagtttgcactttgagtttagccaagttaactttccaaaacaaa i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11229872 359 - 20685099 TATATGTTTTTTGAAAACC--TGCGCATCTCTCAGCAAGTTGGCTTTATACGCAGCAGCAAAAACTTAGCTAGAAACTTGCAGAACTATTCTATT--AAAGAATGAAAAGACAGATCTTAGGGATATCACTGAAATTACAGCGTTCA-GGAgagagaaaagcacagaaaaaaaaagggcaacatagaaaagaagca--cccagttctgcatat------------tctgatcagatctctggctgatcctgcagttatatttg-atgcaacaaactccaaacatta-gaataaggccaaaagaacag-aaacgtatttcagctgctgtcaacagtgag---------tacttgctgtttgagtttagcctagttaaccttctaaaacaaa i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112307611 361 - 122678785 TATTTTATCTTTGGAAACCCCTATGTAGCTCTAAGAAAGTTAGCCTTACATTCAGtgtctaagacttagccagaaaactgcatgcttactctttt--gatgaatgagaagacaaatatcatgcctacaactgaaatga---------gaaagagagagaagtgcag--aaaagaaa---actatgggagagcaaga--tcaaaatctgtatat--------aaactctggccaaatttctggcagatccagaaactaggatggcacacaacagcct-tgggcacaccagataaggccatgagaactgaaggcatatttcaactgctgttgacaaaagggaggca--gaatttgaagtctcagtttagccaaactaaccttttaaagtaaa i canFam3.chr1 I 152 C 0 s dasNov3.JH575754 480335 363 - 2150887 TATTTTGACACCAAAAACATCTGTGTGCTTTTAAGCAAGCTTATCTTAAAtacagtggctaaaatttagccagaaatgtgcagtcttg----tct--gaaaaaacagaaggcagatttcagggctaactctgaaactagaaaatt-aacaagtagaaaaagcacagaaaaaagaaa---aacatagagagacagca--ccaaattctccatctctctgctcaaattctgctcaaatctctgatagttgcagaaactatgcttccatg-------------gcactccagatgaggctgaaagaagagcagagatattccagctgctatgcacagcaggg-gaaggagagtttagaatttgagtct-gacaagtcaacctactcaaacaaa i dasNov3.JH575754 I 8 I 632 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I a score=1387430.000000 s hg38.chr18_GL383571v1_alt 133607 131 + 198278 aggttaaacatcatataaataccattctagaagaaagggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaattttcccaagttgatgaagggcataaagtttacaaatttaagaa s panTro5.chr18 65043638 131 + 78221452 aggttaaacatcatataaataccattctagaagaaagggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaattttcccaagttgatgaaaggcataaagtttacaaatttaagaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162728 131 + 77229886 aggttaaacatcatataaataccattctagaagaaagggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaattttcccaagttgatgaaaggcataaagtttacaaatttaagaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5382241 131 + 17472758 aggttaaacatcatataaataccattctagaagaaagggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaattttcccaagttgatgaaaggcataaagtttacaaatttaagaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422678 131 - 152096393 aggttaaacatcatataaataccattctagaagaaaaggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcctaaagtttacacatttaagaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372748 127 + 70235451 aggttaaacatcatataaataccattctagaagaaaaggagggaatatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63064150 127 - 75711847 aggttaaacatcatataaataccattctagaagaaaaggagggaatatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13623364 127 - 18804593 aggttaaacatcatataaataccattctagaagaagaggagggaatatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234848 127 + 18905526 aggttacacatcatataaataccattctagaagaaaaggagggaatatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60063452 127 - 72318688 aggttacacatcatataaataccattctagaagaaaaggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400820 127 - 1517660 aggttaaacatcatataaataccattctagaagaaaaggagggaatatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3497632 127 + 6513552 aggttaaacatcatataaataccattctagaagaaaaggagggaaaatatggagcagaaatatatttgaagaattaatggacaaaaatttccccaagttgatgaaaggcat-aagtttacaaattt---aa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105264994 129 + 117903854 aggttaaatatcacataaataccattctagaagaaaaggagggaaaatatgaagttgaaatatatttgaagaattcatggacaaaaatttccctaagttga-gaaaggcac-aattttacaaatttaagaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19453620 128 - 31320352 aggttaaatatcacataaatatcattctagaagaaaaggagggaaaatatgaagtt-aaatatatttgaataattaatggacaaaaatttccctaagttga-gaaaggcac-aattttacaaatttaagaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1649157 129 + 2203405 aggttaaatatcacataaataccattctagaagaaaaggagggaaaatatgaagttaaaatatatttgaagaattaatggacaaaaatttccctaagttga-gaaaggcac-aattttacaaatttaagaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3600981 129 - 14941987 aggttaaatatcacataaataccattctagaagaaaaggagggaaaatatggagttgaaatatatttgaagaattaatggacaaaaatttccctaagttga-gaaaggcac-aattttatgaatttaagaa i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11230231 128 - 20685099 aggttaaatgtcacgtacatgtattccaagaagaaaaagaggaaaaataggaagtaaagatgtgtgtgaagaattaatggat-acaacatccccaagtggacaaaaggcat-aa-tctagagatttaagaa i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112307972 115 - 122678785 gagttaaacaccactGTGATTTTAATCT--Tagaataggaggga-------------aaatatatctgaagaatcagcacacaaaatttctctcagtttgatgaaaggtat-atatttatagatttaaaga i canFam3.chr1 C 0 I 469 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 480698 632 - 2150887 I a score=93254.000000 s hg38.chr18_GL383571v1_alt 133738 9 + 198278 gatcatcaa s panTro5.chr18 65043769 9 + 78221452 gatcatcaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162859 9 + 77229886 gatcatcaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5382372 9 + 17472758 gatcatcaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422809 9 - 152096393 gatcatcaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372875 9 + 70235451 gatcatcaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63064277 9 - 75711847 gatcatcaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13623491 9 - 18804593 gatcatcaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234975 9 + 18905526 gatcatcaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60063579 9 - 72318688 gatcatcaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 400947 9 - 1517660 gatcatcaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3497759 9 + 6513552 gatcatcaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105265123 9 + 117903854 attcatcaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19453748 9 - 31320352 attcatcaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1649286 9 + 2203405 attcatcaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3601110 9 - 14941987 attcatcaa i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11230359 9 - 20685099 gtttatcaa i otoGar3.GL873546 C 0 I 2438 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 480698 632 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I a score=3445185.000000 s hg38.chr18_GL383571v1_alt 133747 362 + 198278 tc----ttagtgtaactgatcctatattataaaaatcataaggtggtt-----------aacttctctttgtccttttcttcctccatgcatgattgcttgcctgtagttatttcagtagacagtagtcactaataattgattaacttcatattctaaccacct-ggggttgcctgaaaggttaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctctttaatggcatctagaagttctatctgaggagggaggcaaacagctttgatcacggaaggttctcacctca-----------cacacaccttccttattcatgaaatcacccagttatgttcaaaagcaggtcggacttcagagtttgcctct s panTro5.chr18 65043778 363 + 78221452 tc----ttagtgtaactgatcctatattataaaaatcataaggtggtt-----------aacttctctttgtccttttcttcctccatgcatgattgcttgcccgtagttatttcagtagacagtagtcacaaataattgattaacttcatattctaaccacctgggggttgcctgaaaggttaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctttttaatggcatctagaagttctatctgaggagggaggcaaacagctttgatcacggaaggttctcacctca-----------cacacaccttccttattcataaaatcacccagttatgttcaaaagcaggtcggacttcagagtttgcctct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64162868 363 + 77229886 tc----ttagtgtaactgatcctatattataaaaatcataaggtggtt-----------aacttctctttgtccttttcttcctccatgcatgattgcttgcccgtagttatttcagtagacagtagtcactaataattgattaacttcatattctaaccacctgggggttgcctgaaaggttaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctctttaatgacatctagaagttctatctgaggagggaggcaaacagctttgatcacggaaggttctcacctca-----------cacacaccttccttattcataaaatcacccagttatgttcaaaagcaggtcggacttcagagtttgcctct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5382381 363 + 17472758 tc----ttagtgtaactgatcctatattataaaaatcataaggtggtt-----------aacttctctttgtccttttcttcctccatgcatgattgcttgcccgtagttatttcagtagacagtagtcactaataattgattaacttcatattctaaccacctgggggttgcctgaaaggttaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctctttaatggcatctagaagttctgtctgaggagggaggcaaacagctttgatcacggaaggttctcacctca-----------cacacaccttccttattcataaaatcacccagttatgttcaaaagcaggtcggacttcagagtttgcctct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139422818 368 - 152096393 tcttaattagtgtaactgatcctatattataaaaatcataaggtgttt-----------aacttttctttgtccttttcttcccccatgcatgattgcttgcatgtagttatttcagtacacggtagtcactaataattgattaacttcatattctaaccacccgggggttgcccgaaaggttaataaacttgttttttcttttaaagaacaataatccttaggtcatacagagctctttgatggcatctagaagttctatctgaggagggaagcaaacagctttgatcacggaaagttctcatctca-----------cacacaccttccttattcataaaatcacccagttatgttcaaaagcaggtcggacttcagagtttgcctct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57372884 367 + 70235451 tcttaattagtgtaactgatactatattataaaaatcataaggtgttt-----------aacttttctttgtctttttcttcctccatgcatgattgattgcatataattatctcaggagacaatagtcactaataattgattaacttcatattctaacccaccgggggttgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctctttgatggcatctagaagttcaatctgaggagggaggcaaacaactttgatcatggaaggttcttacctca-----------cacacacctttcttattcatgaaatcacccagttaggttcaaaagtaggtggaacttcagagtttgtctct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63064286 367 - 75711847 tcttaattagtgtaactgatactatattataaaaatcataaggtgttt-----------aacttttctttgtctttttcttcctccatgcatgattgattgcatgtaattatctcaggagacaatagtcactaataattgattaacttcatattctaacccaccgggggttgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctctttgatggcatctagaagttcaatctgaggagggaggcaaacaactttgatcatggaaggttcttacctca-----------cacacacctttcttattcatgaaatcacccagttaggttcaaaagtaggtggaacttcagagtttgtctct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13623500 367 - 18804593 tcttaattagtgtaactgatactatattataaaaatcataaggtgttt-----------aacttttctttgtctttttcttcctccatgcatgattgattgcatgtaattatctcaggagacaatagtcactaataattgattaacttcatattctaacccaccgggggttgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagctctttgatggcatctagaagttcaatctgaggagggaggcaaacaactttgatcatggaaggttcttacttca-----------cacacacctttcttattcatgaaatcacccagttaggttcaaaagtaggtggaacttcagagtttgtctct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13234984 367 + 18905526 tcttaattagtgtaactgatcctatattataaaaatcataaggtgttt-----------aacttttctttgtccttttcttcctccatgcatgattgattgcatgtaactatctcaggagacagtagtcactaataattgattaacttcatattctaacccaccgggggttgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagttctttgatggcatctagaagttcaatctgaggaggggggcaaacaactttgatcatggaaggttctcacctca-----------aacacaccttccttattcatgaaatcacccagttaggttcaaaagtaggtcggacttcagagtttgtctct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60063588 378 - 72318688 tcttaattagtgtaactgatcctatattataaaaatcataaggtgttt-----------tacttttctttgtctttttctttctccatgcatgattgattgcatgtaattatctcaggagacagtagtcactaataattgattaacttcatattctaacccaccgggggttgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggtcacacagagttctttgatggcatctagaagttcagtctgaggagggaggcaaacaactttgatcatggaaggttctcacctcacacacaccttccacacaccttccttattcatgaaatcacccagttaggttcaaaagtaggtcggacttcagagtttgtctct i chlSab2.chr18 C 0 I 6 s manLeu1.NW_012106698v1 400956 367 - 1517660 tcttaattagtgtaactgatcctatattataaaaatcataaggtgttt-----------aacttttctttgtccttttcttcctccatgcatgattgattgcatgtaattatctcaggagacagtagtcactaataattgattaacttcatattctaacccaccgggggttgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggttatacagagttctttgatggcatctagaagttcaatctgaggagggaggcaaacaactttgatcatggaaggttctcacctca-----------cacacaccttccttattcatgaaatcacccagttaggttcaaaagtaggtcggacttcagagtttgtctct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3497768 367 + 6513552 tcttaattagtgtaactgatcctatattacaaaaatcataaggtgttt-----------aacttttctttgtccttttcttcctccatgcatgattgattgcatgtaattatctcaggagacagtagtcactaataattgattaacttcatattctaacccaccggggggtgcctgaaagattaataaacttg-tttttcttttaaagaacaataatccttaggtcatacagagttctttgatggcatctagaagttcaatctgaggagggaggcaaacaactttgatcatggaaggttctcacctca-----------cacacaccttccttattcataaaatcacccagttaggttcaaaagtaggtcggacttcagagtttgtctct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105265132 373 + 117903854 TCTTAATTAGtgtaactgatcttattttataaaaatgataaggtgtttcctttc-----cttttctctttgtccttttcttgcttcatgcatgatcacttacacgtagttatttcgatagagagtagtcactaataattgattaactttatattctaagcccccagaggttgcctgaaagattaatgaaattg-tttttcttttaaagaacaaggattcttagttcatacagacctctttgatggcatctagaagttcagtctgaggagggaggcaaacagctgtgatcacagaaggttctcacctca-----------cactcaacttccttactcataaaagcccctagttatgttcaaaagcaggtcagacttgagagtttgcctct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19453757 378 - 31320352 TCTTAATTAGtgtaactgatcctatatcgtagaaatcataaggtgtttcctttccttttcttttctctttgtccttttcttccttcatgcatgatcacttacaggtagttatttcgatagagagtagtcactaataattgattagctttatactctaagcccccaggggttgcctgcaagattaatgaaatta-tttttcttttaaacaacaatgattcttaggtcaaacagacctctttgatggcatctagaagttcagtctgaggagggaggcaaacagctttgatcacggaagattctcaactca-----------cactcaacttccttactcataaaagcccctagttatgttcaaaagcaggtcagacttgacagtttgcctct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1649295 376 + 2203405 TCTTAATTAGtataactgatcctatattataaaaatgataaggtgtttcctttccttttcttttctctttgtccttttcttccttcatgcatgatcacttatacatagttatttcagttgagagtagtcactaataattgattaactttatattctaagcccccaggggttgcctgcaagattaatgaaattg-tttttattttaaacaacaatgattcttaggtcatacagac--ctttgatggcatctagaagttcggtctgaggagggaggcaaacagctttgatcacggaaggttctcacctca-----------cactcaacttccttactcataaaagcccctagttatgttcaaaagcaggtcagacttgagagtttgcctct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3601119 365 - 14941987 TCTTAATTAGtgtaactgatcctatattataaaaatcataaagtgtttgcttta-----cttttctctttgtccttttcttccttcatgcatgactgcttacatgtagttattttggtagagagtagtcactaataattgattaactttatattctaagtccccaggggttgcctgcaagattaatgaaattg-ttcttcttttaaagaacaatgattcttaggtcatacagacctctttgatggcatctagaagttcagtctgaggagggaggcaaacagctttgatcacggaaggttcttacctca-----------cactcaacttccttactcataaaagctcc--------ttcaaaagcaggtcagacttgagagtttgcctct i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 480698 632 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=102783.000000 s hg38.chr18_GL383571v1_alt 134109 13 + 198278 cccactttcacac s panTro5.chr18 65044141 13 + 78221452 cccactttcacac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163231 13 + 77229886 cccactttcacac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5382744 13 + 17472758 tccactttcacac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423186 13 - 152096393 cccactctcacgc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373251 13 + 70235451 cccactctaacgc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63064653 13 - 75711847 cccactctaacgc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13623867 13 - 18804593 cccactctaacgc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13235351 13 + 18905526 cccactctcccgc i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 401323 13 - 1517660 cccactctcctgc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3498135 13 + 6513552 cccactctcacgc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105265505 13 + 117903854 cccactctcatgc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454135 13 - 31320352 cccactctcacgc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1649671 13 + 2203405 cccactctcacgc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3601484 13 - 14941987 cccactctcacgc i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 480698 632 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I e chlSab2.chr18 60063966 6 - 72318688 I a score=1004411.000000 s hg38.chr18_GL383571v1_alt 134122 105 + 198278 ttcggccaaatcaaataaaccttcctcttctcctatccactgatgtattattgtttggcttactccacactggatattcaaacccaaatttgggggttctaacaa s panTro5.chr18 65044154 105 + 78221452 tttggccaaatcaaataaaccttcctcttctcttgtccactgatgtattattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163244 105 + 77229886 tttggccaaatcaaataaaccttcctcttctcttatccactgatgtattattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5382757 105 + 17472758 tttggccaaatcaaataaaccttcctcttctcctatccaccgatgtattattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423199 105 - 152096393 tttggccaaatcaaataaacctttctctgttcctatccactgatgtgttattgtttggcttactccgcactggatattcaaacccaaatttgggggttctgacaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373264 105 + 70235451 tttggccaaatcaaataaatctttctctgctcctatgcactgatgtgacattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63064666 105 - 75711847 tttggccaaatcaaataaatctttctctgctcctatgcactgatgtgacattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13623880 105 - 18804593 tttggccaaatcaaataaatctttctctgctcctatgcactgatgtgacattgtttggcttactccgcactgaatattcaaacccaaatttgggggttctaacaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13235364 105 + 18905526 tttggccaaatcaaataaatctttctctgctcctatgcactgatgtgacattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60063972 105 - 72318688 tttggccaaatcaaataaatctttctctgctcctatgcactgatatgacattgtttggcttactccgcactggatattcaaacccaaatttcagggttctaacaa i chlSab2.chr18 I 6 C 0 s manLeu1.NW_012106698v1 401336 105 - 1517660 tttggccaaatcaaataaatctttctctgctcctatgcactgatgtgacattgtttagcttactccgcactggatattcaaacccaaatttgggggttctaacaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3498148 105 + 6513552 tttagccaaatcaaataaatatttctctgctcctatgcactgatgtgacattgtttggcttactccgcactggatattcaaacccaaatttgggggttctaacaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105265518 105 + 117903854 tttggccaaatcgaataaacttttctctgctcctatgcactaatgtgccagtgttgggcttactctgcactgtatattcaaacccaaatctgggagttctaacag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454148 105 - 31320352 tttggccaaatcgaataaagttttctctgctcctatgaactgatgtgccagtgttggacttactctgcactgtatattcaaacccaaatctgggagttctaACAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1649684 105 + 2203405 tttggccaaatcgaacaaacttttctctgctcctatgcactcgtgtcccagtattgggcttactctgcactgtgtattcaaacccaaatctgggagttctaacag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3601497 105 - 14941987 cttggctaaatcaaataaacttttctctgctcctatgcactgatgtgccagtgttgggcttactctgcactgtatattcaaacccaaatctgggagttctaacag i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 480698 632 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=4014655.000000 s hg38.chr18_GL383571v1_alt 134227 404 + 198278 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaaccattgattcaaaccttaagagaaagtcttcaaagtagaaatagaaaa-agaacactttacgtacatgggagcaataatattaatgtctgctgac-tttcatcaaaa--acaataaaaaccagaagaccgtg---taatatttc-aaaagtttagaatattttcaacctaagatttccattgccagtgaaaatatctttcagaaatttaaagcaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtcttgtcaggagatctgtactacagaaattttaaaggaaatcctctagttgaaggaaaatTAATAATGATACACACATTGTCAGCTAGCTTG s panTro5.chr18 65044259 404 + 78221452 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaaccatcgattcaaaccttaagagaaagtcttcaaagtagaaatagaaaa-agaacactttatgtacatgggagcaataatattaatgtctgctgac-tttcatcaaaa--acaataaaaaccagaagacagtg---taatatttc-aaaagtttagaatattttcaacctaagatttccattaccagtgaaaatatctttcagaaatttaaagcaaaatgaatatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtcttgtcaggagatctgtactacagaaattttaaagaaaatcctctagttgaaggaaaatTAATAATGATACACACATTGTCAGCTAGCTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163349 404 + 77229886 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaaccatcgattcaaaccttaagagaaagtcttcaaagtagaaatagaaaa-agaacactttatgtacatgggagcaataatattaatgtctgctgac-tttcatcaaaa--acaataaaaaccagaagacagtg---taatatttc-aaaagtttagaatattttcaacctaagatttccattaccagtgaaaatatctttcagaaatttaaagcaaaatgaatatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtcttgtcaggagatctgtactacagaaattttaaagaaaatcctctagttgaaggaaaatTAATAATGATACACACATTGTCAGCTAGCTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5382862 404 + 17472758 cagaagaataaatacaaagaaaatcacacctggacacatcataatcaaaccattgattcaaaacttaagagaaagtcttcaaagtagaaatagaaaa-agaacactttgcgtacatgggagcaataatattaatgtctgctgac-tttcatcaaaa--acaataaaaaccagaagacagtg---taatatttc-aaaagttcagaatattttcaacctaagatttccattgccagtgaaaatatctttcagaaatttaaagcaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggaaacaatgtcttgtcaggagatctgtactacagaaattttaaagaaaatcctctagttgaaggaaaatTAATAATGATACACACATTGTCAGCTAGCTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423304 403 - 152096393 cagcagaataaatacaaagaaaatcacacatagacacatcat----aaatcgttgattcaaaccttaaaagaaagtcttcaaagtagaaatagaaga-agaacactttatgtacatgggagcaataatattaatgtctgctgac-tttcatcaaaa--acaataaaaaccagaagacagtgtaataatatttc-aaaagtttagaatattttcaacctaagacttccattgccagtgaaaatatctttcagaaatttaaagcaaaatgaaaatattttccaatgagagtgtgtgtctattagtgtgatagggaaataatgtcttgtcagcagatctgtactacagaaattttaaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAGCTAGCTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373369 403 + 70235451 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaatcgttgattcaaacctt-aaagaaagtcttcaaagtagaaatacaaaa-agaacactttacatacatgggaggaataatattaatgtctactgac-tttcatcagaa--acaataaaaaccagaagacaatgtaataatatttc-aaaagcttagaacattttcaacttaagatttccatttccagtgaaaacatctttcaaaaatttaaagtaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtctt---agcagatctgtactacagaaattttaaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAACTAGCTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63064771 404 - 75711847 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaatcgttgattcaaaccttaaaagaaagtcttcaaagtagaaatacaaaa-agaacactttacatacatgggaggaataatattaatgtctgctgac-tttcatcagaa--acaataaaaaccagaagacaatgtaataatatttc-aaaagcttagaacattttcaacttaagatttccatttccagtgaaaacatctttcaaaaatttaaagtaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtctt---agcagatctgtactacagaaattttaaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAACTAGCTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13623985 404 - 18804593 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaatcgttgattcaaaccttaaaagaaagtcttcaaagtagaaatacaaaa-agaacactttacatacatgggaggaataatattaatgtctgctgac-tttcatcagaa--acaataaaaaccagaagacaatgtaataatatttc-aaaagcttagaacattttcaacttaagatttccatttccagtgaaaacatctttcaaaaatttaaagtaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtctt---agcagatctgtactacagaaattttaaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAACTAGCTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13235469 404 + 18905526 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaatcgttgattcaaaccttagaagaaagtcttcaaagtagaaatacaaaa-ggaacactttacatacatgggaggaataatattaatgtctgctgac-tttcatcagaa--acaataaaaaccagaagacagtgtaataatatttc-aaaagctaagaacattttcaacttaagatttccatttccagtgaaaacatctttcaaaaatttaaagcaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggatataatgtctt---agcagatctgtactacagaaattttaaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAACTAGCTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60064077 404 - 72318688 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaatcgttgattcaaaccttaaaagaaagtcttcaaagtagaaatacaaaa-agaacactttacatacatgggaggaataatattaatgtctgctgac-tttcatcagaa--acaataaaaaccagaagacagtgtaataatatttc-aaaagcttagaacattttcaccataaaatttccatttccagtgaaaacatctttcaaaaatttaaagcaaaatgaaaatattttccaatgagagagtgtgtctattcgtgtgagagggaaataatgtctt---agcagatctgtactacagaaattttgaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAACTAGTTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 401441 404 - 1517660 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaatcgttgattcaaaccttagaagaaagtcttcaaagtagaaatacaaaa-ggaacactttacatacatgggaggaataatattaatgtctgctgac-tttcatcagaa--acaataaaaaccagaagacagtgtaataatatttc-aaaagctaagaacattttcaacttaagatttccatttccagtgaaaacatctttcaaaaatttaaagcaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggatataatgtctt---agcagatctgtactacagaaattttaaagaaaatcttctagttgaaggaaaatTAATAATGATATACACATTGTCAACTAGCTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3498253 407 + 6513552 cagcagaataaatacaaagaaaatcacacctagacacatcataatcaaattgttgattcaaaccttaaaagaaagtcttcaaagtagaaatacaaaa-agaacactttacatacatgggaggaataatattaatgtgtgctgac-tttcatcagaa--acaacacaaaccagaagacagtgtaataatatttc-aaaagcttagaacattttcaacttaagatttccatttccagtgaaaacatctttcaaaaatttaaagcgaaatgaaaatattttccaatgagagagtgtgtctatttgtgtgagagggaaataatgtcttgtcagcagacctgcactacagaaattttaaagaaaatctcttagttgaaggaaaatgaATAACAATATACACATTGTCACCTGGcttg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105265623 404 + 117903854 caGTAGAACTAGTAcaaaaacaaccacacctagacacatcataatcaaatcgttaattcaaaccttaaaagaaaatcttcaaagtagaaagagaaaa-a-aacagtttacatacatgggaacaataatattaatgtttgctgac-cttcatcaaaa--acaataaaaaccagaagacactgtaataatattta-gaaagtttataatattttcaacctaagatttccatttccagtgaaaatatctttc-aaaatttaaaacaaaatgaaactattttccaatgagagagtgtgtctattagtgtgagaggaaaataatgtcctgtcatcagaactgtaccacagaaattttaaataaaatcttcctgttgaagaaaa-TCAATAATGATATACACATTGTTAGCCAGCTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454253 397 - 31320352 Cagtagaactagtgcaaaaacaaccgcgcctagacacatcataatcaaattttcaattcaaatcttaaaagaaaatcttcaaagtagaaagagaaaa-agaacactttatgtacatgggaacaataatattaatgtttgctgac-tttcatcaaaa--acaataaaaaccagaagacagtgtaataatatttc--aaaggttagaatattttcaatctaagatttccatttccagtgaaaatatctttcaaaaatttaaaacaaaatgaaaatattttcCAAT--GCGAGTGTGTCTATTAGTGTGAGAGGGAAATAATGTCCTGTCATCAGATCTGTACCACAGAAATTT----TAAAATCTTCCTGTTGAAGGAAA---ATTAATGATATACACATTGTTGGCCAGCTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1649789 403 + 2203405 c---aGAACTAGTAcaaaaacaaccacacctagacgcataataatcaaattgttaattcaaacgttaaaagaaaatcttcaaagtagaaagaaaaaa-agaacactttatgtacatgggaacaataatattaatgtttgctgac-tttcatcaaaa--acaataaaaaccagaagacagtataataatatttc--aaaagttagaatattttcaacctaagatttccatttccagtgaaaatatctttcaaaaatttaaaacaaaatgaaaatattttccaatgagagagtgtgtctattagtgtgagagggaaataatgtcctgtcatcagatctgtaccagagaaattttaaataaaatcttcctgttgaaggaaaatTAATAATGATATACACATTGTTGGGTAGCTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3601602 407 - 14941987 caGTAGAACTAGTAcaaaaacaatcacacctagacacatcataatcaaactgttaattcaaaccttaaaagaaaatcttcaaagtagaaagagaaaa-agaacactttacatacatgggaacaataatattaatgtttgctgac-tttcatcaaaa--acaataaaaaccagaagacagtgtaataatatttc-aaaagtttagaatattttcaacctaagatttccatttccagtgaaaatatttttcaaaaatttaaaacaaaatgaaaatattttccaatgagagagtgtgtctattaatgtgagagggaaatagtgtcctgtcatcagatctgtaccacagaaattttaaataaaatcttcctgttgaaggaaaatTAATAATGATATACACATTATTGGCCAGCTTG i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 481330 347 - 2150887 aagcagaataaatacaaagaaaa-----cctaggtacatcacagacaaactactg----aaaataaaacagaaaattttcaaagaagagattaattatacaacacattagacacagggtagctgtgatatgaa--tctgttaacttttcattaaaaagaaaatggaagctagaagagagtgtaccaacatttcaaaaagttcaggatattttcaag----------------caatgaaaatatcttttaaaaa-tgacaacaaaatgaaagtagtttctgataaggg--------tgttgggtggggaaagaaagaatgctttatcagcaaacccatagtacaagaat--------acaatttcaggttgaacggaaatTA---------------------GCTAACTTC i dasNov3.JH575754 I 632 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=25095.000000 s hg38.chr18_GL383571v1_alt 134631 3 + 198278 ACC s panTro5.chr18 65044663 3 + 78221452 ACC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163753 3 + 77229886 ACC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383266 3 + 17472758 ACC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423707 3 - 152096393 GCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373772 3 + 70235451 ACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065175 3 - 75711847 ACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624389 3 - 18804593 ACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13235873 3 + 18905526 ACT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60064481 3 - 72318688 ACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 401845 3 - 1517660 ACT i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105266027 3 + 117903854 ACC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454650 3 - 31320352 ACC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1650192 3 + 2203405 ACC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3602009 3 - 14941987 ACC i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 481677 3 - 2150887 ACC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I e colAng1.NW_012115433v1 3498660 0 + 6513552 C a score=1558161.000000 s hg38.chr18_GL383571v1_alt 134634 191 + 198278 TAATCGAAAATTATAAAGTGCGACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaaaaatgttttgtcagcagacctgtactacagaaattttaaagaaaatctcccagttgaaggaaaatTAAAAATGATATACACATTGTCACCTGGcttgg- s panTro5.chr18 65044666 191 + 78221452 TAATCGAAAATTATAAAGTGCGACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaaaaatgttttgtcggcagacctgtactacagaaattttaaagaaaatctcccagttgaaggaaaatTAAAAATGACATACACATTGTCACCTGGcttgg- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163756 191 + 77229886 TAATCGAAAATTATAAAGTGCGACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaaaaatgttttgttggcagacctgtactacagaaattttaaagaaaatctcccagttgaaggaaaatTAAAAATGACATACACATTGTCACCTGGcttgg- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383269 191 + 17472758 TAATCGAAAATTGTAAAGTGCGACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTAGTGTGAGAGGgaaaaaatgttttgtcagcagacctgtactacagaaattttaaagaaaatctcccagttgaaggaaaatTAAAAATGATATACACATTGTCACCTGGcttgg- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423710 191 - 152096393 TAATGGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGTGTCTATTTGTGTGAGAGGgaaataatgttttgtcagcagacctgtactacagaaaatttaaagaaaatctccaagttgaaggaaaatTAATAATGATATACacattgtcacctggcttgg- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373775 190 + 70235451 TAATCGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaataatgtcttgtcagcagacctgcactacagaaattttaaagaaaatttattagttgaaggaaaatTAATAACGATATACACATTGTCACCTGGCTTG-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065178 190 - 75711847 TAATCGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGGAAATAATGTCttgtcagcagacctgcactacagaaattttaaagaaaatttattagttgaaggaaaatTAATAACGATATACACATTGTCACCTGGCTTG-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624392 190 - 18804593 TAATCGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaataatgtcttgtcagcagacctgcactacagaaattttaaagaaaatttattagttgaaggaaaatTAATAACGATATACACATTGTCACCTGGCTTG-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13235876 190 + 18905526 TAATCGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaataatgtcttgtcagcagacctgcactacagaaattttaaagaaaatctctcagttgaagaaaaatTAATAACGATATACACATTGTCACCTGGCTTG-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60064484 190 - 72318688 TAATAGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGGAAATAATGTCttgtcagcagacctgcactacagaaattttaaagaaaatctctcagttgaggaaaaatTAATAACGATATACACATTGTCACCTGGCTTG-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 401848 190 - 1517660 TAATCGAAAATTATAAAGTGCTACACATAAAAATATCAGTATATGCATTCTAAATGCTTCCTAGAGAGTGCATCTATTTGTGTGAGAGGgaaataatgtcttgtcagcagacctgcactacagaaattttaaagaaaatctctcagttgaagaaaaatTAATAACGATATACACATTGTCACCTGGCTTG-- i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105266030 191 + 117903854 TTATCCAAAATTATAAATTTTTACACATAAAAGTATCAGTATATTCATTTTAAGTGCTTTCTAGAGAGTGCATCTATTTGGGGGAGAGGCAAATAATATCTTGACAGAAGACCTATACTACAGAAATTTTAAAGAAAGTATGCTAGTTGAAGGAAAATTAATAATGACATACATATTGtcagctagcttg-a i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454653 191 - 31320352 TTATCAAAAATTATAAAGTGCTACACATAAAAGTATCAGTATATTCATTCTAAGTGCTTTCTAGAGAGTGCATCTACTTGGGTGAGAGGCAAATaataccttgacagcagacctgtactacagaaattttaaagaaattatcctagttgaaggaaaatTAATAATGAGATACATATTGtcagctagcttg-a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1650195 191 + 2203405 TTATCAAAAATTATAAAGTGCTACACATATAAGTATCAGTATATTCATTCTAAGTGCTTTCTAGAGAGTGCATCTATTTGGCTGAGGGGCAAATaataccttgacagcagacctgtactacagaaattttaaagaaattatcctagttgaaggcaaatTAATAACGATATACATATTGTCACCTAGCTTg-a i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3602012 187 - 14941987 TTATCAAAAATTATAAAGTGCTACACATAAAAGTATCAGTATATTCA----AAGTGCTTTCTAGAGAGTGCATCTATTTGGGTGAGAGGCAAATAATATCttgacagcagacctgtactacagaaattttaaaaaaattatcctagttgaaggaaaattaataacgatatacatactgtcagctagcttg-a i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 481680 0 - 2150887 C e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I e colAng1.NW_012115433v1 3498660 0 + 6513552 C a score=59207.000000 s hg38.chr18_GL383571v1_alt 134825 6 + 198278 cctaaa s panTro5.chr18 65044857 6 + 78221452 cctaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163947 6 + 77229886 cctaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383460 6 + 17472758 cctaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423901 6 - 152096393 cctaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373965 6 + 70235451 Cctaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065368 6 - 75711847 Cctaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624582 6 - 18804593 Cctaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236066 6 + 18905526 Cctaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60064674 6 - 72318688 Cctaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402038 6 - 1517660 Cctaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3498660 6 + 6513552 cctaaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266221 6 + 117903854 cctaat i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454844 6 - 31320352 cctaat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1650386 6 + 2203405 cctaac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3602199 6 - 14941987 cctaaa i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 481680 0 - 2150887 C e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=3254391.000000 s hg38.chr18_GL383571v1_alt 134831 346 + 198278 tgaaaattataaagtgctacacataaaaatatcagtatattcattctttctaagtgc-ttgtgtacatttatcatggtatggtacatttatagaccatattctgggcatcaaagaatgctcagtaat---------tgaaatcacagaaagcatcttcttaaccacga------taaactaaaaaattaataaaagga-----tagaagagaaaactcttaaatgttttaaaac--aacatgcagttgtacatatcctatagttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttaaaaaaa s panTro5.chr18 65044863 345 + 78221452 tgaaaattataaagtgctacacataaaaatatcagtatattcattctttctaagtgc-ttgtgtacatttatcatggtatggtacatttatagaccatattctgggcatcaaagaatgctcagtaat---------tgaaatcagagaaagcatcttcttaaccacga------taaactaaaaaattaataaaagga-----tagaagagaaaactc-taaatgttttaaaac--aacatgcagttgtacatatcccatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttaaaaaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64163953 341 + 77229886 tgaaaattataaagtgctacacataaaaatatcagtatattca----ttctaagtgc-ttgtgtacatttatcatggtatggtacatttatagaccatattctgggcatcaaagaatgctcagtaat---------tgaaatcacagaaagcaacttcttaaccacga------taaactaaaaaattaataaaagga-----tagaagagaaaactc-taaatgttctaaaac--aacatgcagttgtacatatcctgtggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttaaaaaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383466 343 + 17472758 tgaaaattataaagtgctacacataaaaatatcagtatattcatt--ctctaagtgc-ttgtgtacatttatcatggtatggtacatttatagaccatattctgggcatcaaagaatgctcagtaat---------tgaaatcacagaaagcatcttcttaaccatga------taaactaaaaaattaataaaagga-----tagaagagaaaactc-taaatgttttaaaac--aacatgcagttgtacatatcctatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttacaaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139423907 345 - 152096393 tgaaaattataaagtgctacacataaaaatatcagtatattcattctttctaagtgc-ttgtgtacatttatcatggtatggtacacttatagaccatattctgggcatcaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttaaccacaa------taaactaaaaaattaatagaagga-----tagaagagaaaactc-taaatgttttaaaac--aacatgcagttgtacatatcctacggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagttagtacctaaaaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57373971 345 + 70235451 tgaaaattataaagtgctacacacaaaaatatcagtatatacattctttctaagtgt-ttgtgtacatttatcatggtatagtacatttatagaccatattctgtgcaccaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttagccatga------taaactaaaaaattaatagaagga-----taggagataaaactc-gaaatgttttaaaac--aacatgcagttgctcatatcctatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatacataaaaatttgtgaggtaaagccaagtcagtacttaaaaaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065374 345 - 75711847 tgaaaattataaagtgctacacacaaaaatatcagtatatacattctttctaagtgt-ttgtgtacatttatcatggtatagtacatttatagaccatattctgtgcaccaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttagccatga------taaactaaaaaattaatagaagga-----taggagataaaactc-gaaatgttttaaaac--aacatgcagttgcacatatcctatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatacataaaaatttgtgaggtaaagccaagtcagtacttaaaaaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624588 345 - 18804593 tgaaaattataaagtgctacacacaaaaatatcagtatatacattctttctaagtgt-ttgtgtacatttatcatggtatagtacatttatagaccatattctgtgcaccaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttagccatga------taaactaaaaaattaatagaagga-----taggagataaaactc-gaaatgttttaaaac--aacatgcagttgcacatatcctatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatgcataaaaatttgtgaggtaaagccaagtcagtagttaaaaaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236072 345 + 18905526 tgaaaattataaagtgctacatacaaaaatatcagtatatacattctttctaagtgc-ttgtgtacatttatcatggtatagtacatttatagaccgtattctacacatcaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttagccatga------caaactaaaaaattaacagaagga-----taggagataaaactc-taaatgttttaaaac--aacatgcagttgcacatatcctatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttaaaaaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60064680 345 - 72318688 tgaaaattataaagtgctacacacaaaaatatcagtatatacattctttctaagtgc-ttgtgtacatttatcatggtatagtacatttatagaccatattctgcgcatcaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttatccatga------taaactaaaaaattaatggaagga-----taggagataaaactc-taaatgttttaaaac--aacatggagttgcacatatcctatggttgaataatatgtcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatatgtgaggtaaagccaagtcagtacttaaaaaca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402044 345 - 1517660 tgaaaattataaagtgctacatacaaaaatatcagtatatacattctttctaagtgc-ttgtgtacgtttatcatggtatagtacatttatagaccgtattctgcgcatcaaagaatgctcagtaat---------tgaaatcacacaaagcatcttcttagccatga------caaactaaaaaattaatagaagga-----taggagataaaactc-taaatgttttaaaac--aacatgcagttgcacatatcctatggttgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttaaaaaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3498666 339 + 6513552 tgaaaattataaagtgctacacacaaaaa------tatatacattctttctaagtgc-ttgtgtacatttatcatggtatagtacatttatagaccatattgtgcgcatcaaagaatgctcagtaat---------tgaaatcacacgaagcatcttcttagccatga------taaactaaaaaattaatagaagga-----taggagataaaactc-taaatgttttaaaac--aacatgcagttgcacatatcctatgattgaataatatatcataaggtagatacaaatatatattcaattgaatgaaataaaaatgagatatataaaaatttgtgaggtaaagccaagtcagtacttaaaaaca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266227 351 + 117903854 tgaaaattataaagtataatacataaaaatatcagtgtattcatc----ctaagtgc-ttgtgtacatttatcatgctatggtacatttatagaccatagtctgagcatcaaagaatgctcagtaattgcagtaattgaaatcacacaaagcatcttcttaaccacaataaaatcaaattataaaattaacagaagga-----cagaagagaaaactc-taaatattttaaaac--aacagacaactgtaaatatcctatggttgcataatacatcacataggatatataaatacatacttaattgaatgaaataaaaa-aagatacat-aaaacttgttggataaagtc--atcagtacttaaaaa-a i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19454850 341 - 31320352 tgaaaattataaagtataatacctaaaaatatcagtatattcatcctttctaagtgc-ttgtgtacatttatcatgttatggcacatttatagaccatattctgagcatcaaagaatgctcagtaattgcagtaactgaaatcacacaaag------------cacaatgaaattaaattataaaattaacagaagga-----cagaaaa-------c-taaatattttaaaac--aacatacagctgtaaatatcctatcgttgcataatacatcatataggatgtataaatatatacccaattgaatgaaataaaaacaagatatataaaaatttgttggataaagtctagtaagtacttaaaaata i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1650392 360 + 2203405 tgaaaattataaagtataatacataaaaatatcagtatattcatcttttctaagtga-ttgtgtacatttatcatgttatggtacttttatagaccatattctgatcatcaaagaatgctcagtaattgcagtaattgaaatcacacaaagcatcttcttatccacaaagaaattaaattataaaattaacagaagga-----cagaagagaaaactc-taaatattttaaaac--aacatacagctgtaaataccctacggttgcgtaatacatcatataggatgtataaatatatactcaatggaatgaaataaaaacaagatatataaaaatttgttggataaagtctagtcagtacttaaaaata i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3602205 357 - 14941987 tgaaaattataaagtgtaatacataaaaatatcagtatattcatcctttctaagtgc-ttgtgtgcatttatcatgttatggtacatttatagacaatattctgagcatcaaataatgctcagtaattgcagtaattgaaatcatacaaagcatcttcttaaccacaatgaaattaaattataaaattaacagaagga-----cagaagagaaaactc-taaatattttaaaac--aacatacagctgtaaatatcctatgattgcataatacatcatatgggatgtataaatatatactcaattgaatgaaataaa---aagatatataaaaatttgttgaataaagtctagtcagtacttaaaaaaa i aotNan1.NW_018502140v1 C 0 I 119 s dasNov3.JH575754 481680 329 - 2150887 Tgacaattataaaatactctacccaacaatatcagaatatgcattctttttaagtgtacccagtacacttagcaag-------------atagaccaagttttgggccataaa-aattctcaataaata-------tgaaagtattacaaccat----gcaaccacaa-----ttaaattacaaaattaataaaagaaagatgtggagtaaaaaatca-caaatatttgaaaattaaaggcacatttcataatagctcatgg----acaagttttaaaaagcagaagttaaaaatattctcaattgaata----aaaattaacttgtatcaaagtgtgtggtataca-ctaagtcagtgcttaaaggga i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=272843.000000 s hg38.chr18_GL383571v1_alt 135177 33 + 198278 aatt--taATGTGAAAATTCCTGTATTCGCaaagt s panTro5.chr18 65045208 33 + 78221452 aatt--taATGTGAAAATTCCTGTATTCGCaaagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64164294 33 + 77229886 aatt--taATGTGAAAATTCCTGTATTCGCAAGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383809 33 + 17472758 aatt--taATGTGAAAATTCCTGTATTCGCaaagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424252 33 - 152096393 aatt--taatgtgaaaattcctgtattCGCaaagt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57374316 33 + 70235451 aatt--taATGTGAAAATTCCTGTATTCGCaaagt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065719 33 - 75711847 aatt--taATGTGAAAATTCCTGTATTCGCaaagt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624933 33 - 18804593 aatt--taATGTGAAAATTCCTGTATTCGCaaagt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236417 33 + 18905526 aatt--tCATGTGAAAATTCCTGTATTCCCAAAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065025 33 - 72318688 aatt--taATGTGAAAATTCCTGTATTTGCaaagt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402389 33 - 1517660 aatt--taATGTGAAAATTCCTGTATTCGCAAGGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499005 33 + 6513552 aatt--taatgtgaaaattcctgtattCTCaaagt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266578 30 + 117903854 --at--taat-tgaaaattcttgttttagcaaagt i calJac3.chr13 C 0 I 86 s saiBol1.JH378121 19455191 30 - 31320352 --at--taat-tgaaaattcttgttttagcaaagt i saiBol1.JH378121 C 0 I 87 s cebCap1.NW_016107689v1 1650752 30 + 2203405 --at--taat-tgaaaattcttgttttagcaaagt i cebCap1.NW_016107689v1 C 0 I 91 s dasNov3.JH575754 482009 35 - 2150887 aattcataacatgaaaatacttatattagaaaagt i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I e aotNan1.NW_018502140v1 3602562 119 - 14941987 I a score=112493.000000 s hg38.chr18_GL383571v1_alt 135210 10 + 198278 atgattgcca s panTro5.chr18 65045241 10 + 78221452 atgattgcca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64164327 10 + 77229886 ATGATTGCCa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383842 10 + 17472758 atgattgcca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424285 10 - 152096393 atgattgcca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57374349 10 + 70235451 atgattgcca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065752 10 - 75711847 atgattgcca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624966 10 - 18804593 atgattgcca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236450 10 + 18905526 ATGATTGCCa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065058 10 - 72318688 atgattgcca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402422 10 - 1517660 ATGATTGCCa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499038 10 + 6513552 atgattgcca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266694 10 + 117903854 atgattgcca i calJac3.chr13 I 86 C 0 s saiBol1.JH378121 19455308 10 - 31320352 ATGATTGCCa i saiBol1.JH378121 I 87 C 0 s cebCap1.NW_016107689v1 1650873 10 + 2203405 atgattgcca i cebCap1.NW_016107689v1 I 91 C 0 s aotNan1.NW_018502140v1 3602681 10 - 14941987 atgattgtca i aotNan1.NW_018502140v1 I 119 C 0 s dasNov3.JH575754 482044 10 - 2150887 caaattttca i dasNov3.JH575754 C 0 I 6947 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=2337252.000000 s hg38.chr18_GL383571v1_alt 135220 250 + 198278 tcaattaccaggaaggatttggagaaattagaactctcatactctgctggttgaaatgtaaaatggtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaaca---tacaTAGATggaaataaaacttgcctagatttttcactgtttctgtgaaaagcccttgcctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgtcttcttaattgttctgacc------- s panTro5.chr18 65045251 243 + 78221452 tcaattaccaggaaggatttgtagaaactagaactctcatactctgctggttgacatgtaaaatggtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaaca---tacaTAGATggaaataaaacttgcctagatttttcactgtttctgtgaaaagcccttgcctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgtcttcttaattgt-------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64164337 243 + 77229886 tcaattaccaggaaggatttggagaaactagaactctcatactctgctggttgaaatgtaaaatggtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaaca---tacaTAGATggaaataaaacttgcctagatttttcactgtttctgtgaaaagcccttgcctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgtcttcttaattgt-------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5383852 243 + 17472758 tcaattaccaggaaggatttggagaaactagaactctcatactctgctggttgaaatgtaaaatggtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaaca---tacaTAGATggaaataaaacttgcctagatttttcactgtttctgtgaaaagccctcgcctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgtcttcttaattgt-------------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424295 246 - 152096393 tcaattaccaggaaggatttgaagaaactagaattctcatacactgctggttgaaatgtaaaatggtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaacatacTACATAGATggaaataaaacttgcctagagttttcactgtttctgtgaaaagccctcgcctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgttttcttaattgt-------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57374359 246 + 70235451 tcaattaccaggaaggatttggagaaactagaactctcatacactgctggtagaaatgtaaaattgtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaacatacTACATAGATggaaataaaacctgccgagatttttcactgtttctgtgaaaagccctctcctcctagaaatattttcacaaaccattagagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63065762 246 - 75711847 tcaattaccaggaaggatttggagaaactagaactctcatacactgctggtagaaatgtaaaattgtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaacatacTACATAGATggaaataaaacctgccgagatttttcactgtttctgtgaaaagccctctcctcctagaaatattttcacaaaccattagagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13624976 246 - 18804593 tcaattaccaggaaggatttggagaaaccagaactctcatacactgctggtagaaatgtaaaattgtataaaaacttttgaaaactgc-ttttcagtttcttaagaagttaaacatacTACATAGATggaaataaaacctgccgagatttttcactgtttctgtgaaaagccctctcctcctagaaatattttcacaaaccattagagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236460 246 + 18905526 tcaatta-caggaaggatttggagaaactagaactctcatacactgctggtagaaatataaaattgtataaaaacttttgaaaagtgctttttcagtttcttaagaagttaaacatacTACATAGATggaaataaaacttgccgagatttttcactgtttctgtgaaaagccctctcctcctagaaatattttcacaaaccattagagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065068 247 - 72318688 tcaattaccaggaaggatttggagaaactagaactctcatacactgctggtagaaatgtaaaattgtataaaaacttttgaaaagtgctttttcagtttcttaagaagttaaacatacTAAATATATggaaataaaacttgccgagatttttcactgtttctgtgaaaagccctctcctcctagaaatattttcacaaaccactcgagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402432 247 - 1517660 tcaattaccaggaaggatttggagaaactagaactctcatacactgctggtagaaatgtaaaattgtataaaaacttttgaaaagtggtttttcagtttcttaagaagttaaacatacTACATAGATggaaataaaacttgccgagatttttcactgtttctgtgaaaagccctctcctcctagaaatattttcacaaaccattagagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499048 244 + 6513552 tcaattaccaggaaggatttggagaaactagaactctcatacactgctggtagaaatgtaaaattgtataaaaac--ttgaaaactgc-ttttcagtttcttaagaagttaaacatactacctaGATggaaataaaacttgccgagatttctcactgtttctgtgaaaagccctctcctcccagaaatattttcacaaaccattagagatcttaagtagatctgtagccatttgtcttcttaattgt-------------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266704 252 + 117903854 tcaagtatcagcaaggatttggagaaactagaactcttatgtgctgctggtggaaaagcaaaatggtataaagacttttgaaaactgt-ttttcagtttcttaaacagataaacatactacaaaaagggaaataagactttcctagatttttcactgtttcggtaaaaagccctcacctcctagaaatattttcacaaaccatcagagatctcaattagatctgtagccatttgtctacttagttgt-------tctgat- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19455318 252 - 31320352 tcaagtatcagcaaggatttggagaaactagaactctcatgtgctgctggtggaaatgtaaaatggtataaacacttttgaaaactgt-ttttcagtttcttcaacagataaacatactacatagagggaaataaaactttcctagatttttcgctgtttctgtaaaaagctctcacctcctagaaatattttcacaaaccattagagatttcaattagatctgttttaatttgtctacttagttgt-------tctgac- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1650883 252 + 2203405 tcaagtatcagcaaggatttggagaaactagaactctcatgtgctgctggtggaaatgtaaaatggtataaacacttttgaaaactgt-ttttcaggttcttaaacagataaacatattacatagagggaaataaaactttcctagatttttcaccgtttctgtaaaaagctctcacctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgtctacttagttgt-------tctgac- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3602691 253 - 14941987 tcaagtatcagcaaggatttggagaaactagaattctcatgtgctgctggtggaaatgtaaaatggtataaacacttttgaaaactgt-ttttcagtttcttaaacagataaatatactacatagagggaaataaaactttcctagatttttcactgtttctgtaaaaagccctcacctcctagaaatattttcacaaaccattagagatctcaattagatctgtagccatttgtctacttagttgt-------tttgacc i aotNan1.NW_018502140v1 C 0 I 28 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=190085.000000 s hg38.chr18_GL383571v1_alt 135470 31 + 198278 aatctga-ccaatgagatattcaaacttctag s panTro5.chr18 65045494 29 + 78221452 --tctga-ccaatgagatattcaaacttctat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64164580 29 + 77229886 --tctga-ccaatgagatattcaaacttctat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384095 29 + 17472758 --tctga-ccaatgagatattcaaacttctat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424541 29 - 152096393 --tctga-ccaatgagatattcaaacttctat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57374605 30 + 70235451 --tctgacccaatgagatagtcaaacttctat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066008 30 - 75711847 --tctgacccaatgagatagtcaaacttctat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625222 30 - 18804593 --tctgacccaatgagatagtcaaacttctat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236706 30 + 18905526 --tctgacccaatgagatagtcaaacttctat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065315 30 - 72318688 --tctgacccaatgagatagtcaaacttctat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402679 30 - 1517660 --tctgacccaatgagatagtcaaacttctat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499292 30 + 6513552 --tctgacccaatgagatagtcaaacttctat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266956 24 + 117903854 --------ccaatgtgagagtcaaacttctca i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19455570 24 - 31320352 --------ctaatgagagagtcaaacttctca i saiBol1.JH378121 C 0 I 5 s cebCap1.NW_016107689v1 1651135 24 + 2203405 --------tcaatcagagagtcaaacttctca i cebCap1.NW_016107689v1 C 0 I 5 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I e aotNan1.NW_018502140v1 3602944 28 - 14941987 I a score=1775520.000000 s hg38.chr18_GL383571v1_alt 135501 195 + 198278 gtaaaatggttacagttgt----attaggttccgggttaagactccaagatacaac-aaaatataatagcagctactttcctaggtatttacatatcaaaggcgaatcagctccaggaacttggacacatctc-----cataaaaactgggtcacaagtggctagctggctgtgagacagatttcatatacattcatactgaaag s panTro5.chr18 65045523 195 + 78221452 gtaaaatggttacagttgt----attaggttccgggttaagactccaaggtacaag-aaaatatgatagcagctactttcctaggtatttacatatcaaaggcaaatcagctccaggaacttggacacatctc-----cataaaaactgggtcacaaggggctagctgtctgtgagagagatttcatatatattcatgctgaaag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64164609 195 + 77229886 gtaaaatggttacagttgt----attaggttccgggttaagactccaaggtacaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggcaaatcagctccaggaacttggacacatctc-----cataaaaactgggtcacaaagggctagctggctgtgagagagatttcatatatattcatgctgaaag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384124 166 + 17472758 gtaaaatggttacagttgt----attaggttccgggttaagactccaaggtacaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggcaaatcagttccaggaacttggacacatctc-----cataaaaactacgtcacaagggcctagctg-----------------------------gctgaaag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424570 195 - 152096393 gtaaaatggttacagttgt----attaggttccgggttaagactccaaggtacaag-aaaatataatagcagctactttcttaggtatttacctatcaaaggcaaatcggctccaggaacttggacacatctc-----cataaaaactgggtcacaagaggctagctggctgtgagagagatttcatatacattcatgctgaaag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57374635 195 + 70235451 gtaaaatggttacagttgt----actaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggcgaatcagctccaggaacctggacatatctc-----cataaaaactgggtcacaaggggatagctggctgtgagagagatttcatatacatgcatgctgaaag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066038 195 - 75711847 gtaaaatggttacagttgt----actaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggcgaatcagctccaggaacctggacatatctc-----cataaaaactgggtcacaaggggatagctggctgtgagagagatttcatatacatgcatgctgaaag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625252 195 - 18804593 gtaaaatggttacagttgt----actaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggcgaatcagctccaggaacctggacatatctc-----cataaaaactgggtcacaaggggatagctggctgtgagagacatttcatatacacgcatgctgaaag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236736 195 + 18905526 gtaaaatggttacagtcgt----actaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactctcctaggtatttacgtatcaaaggtgaatcagttccaggaacctggacacatctc-----cataaaaactgggtcacaaggggatagctggctgtgagagagatttcatatacatgcatgctgaaag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065345 195 - 72318688 gtaaaatggttacagttgt----actaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggtgaatcagttccaggaacttggacacatctc-----cataaaaactgggtcacaaggggatacctggctgtgagagagatttcatatacatgcatgctgaaag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402709 195 - 1517660 gtaaaatggttacagttgt----actaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactctcctaggtatttacgtatcaaaggtgaatcagttccaggaacttggacacatctc-----cataaaaactgggtcacaaggggatagctggctgtgagagagatttcatatacatgcatgctgaaag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499322 199 + 6513552 gtaaaatggttacagttgtactaactaggttctgggttaagactccaaggtgcaag-aaaatataatagcagctactttcctaggtatttacatatcaaaggcgaatcagctccaggaacttggacacatctc-----cataaaaactgggtcacaaggggatagctggctgtgagagagatttcatatacatgcatgctgaaag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105266985 199 + 117903854 ctaaaatggttacagttgt----actaggttccaggttaagagttcaaggtacctg-aaaaaataagagcagctactttcctaggtacttacatatcaaaggggaatgggctccaagaatctggacacatctctagatcataaaaactgggtcacaaggggctagcaggctgagagagaga-ttcatatacacggatgctgaaag i calJac3.chr13 I 5 C 0 s saiBol1.JH378121 19455599 194 - 31320352 ttaaaatggttacagttgt----actaggttccaggttaagagtccaaggtacctgaaaaaaaaaagagcagctactttcc----tatttacatatcaaaggcgaatgggctccaagaatatggacacatctgtagatcataaaaactggggcacaaggggctggctggct--gtgagata-ttcatacacatgcatgctgaaag i saiBol1.JH378121 I 5 C 0 s cebCap1.NW_016107689v1 1651164 198 + 2203405 ttaaaatggttacagttgt----actaggttccaggttaagagtccaaggtacctg-aaaaaataagagcagctactttcctaggtattcacatatcaaaggcgaatgggctccaagaatctggacacatctctaggtcataaaaaccgggtcacaaggggctagctggctgtgagagaga-ttcatat-catgcatgctgaaag i cebCap1.NW_016107689v1 I 5 C 0 s aotNan1.NW_018502140v1 3602972 199 - 14941987 ctaaaatggttacaattgt----actaggttccaggttaagagtccaaggtacctg-aaaaaataagagcagttactttcctgggtatttacatattaaaggcgaatggtctccaagaatctggacacatctctaggtcataaaaactgggtcacaaggggctagctggctctgagagaga-ttcatatacatgcatgctgaaag i aotNan1.NW_018502140v1 I 28 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1260425 718 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=2173777.000000 s hg38.chr18_GL383571v1_alt 135696 219 + 198278 gctggagtaaggagtccctttcaggaggggtgggatacagctgcctcctccccctttataagtagagaaaaatta-ttatttttctttattcctagctatggagctgtccagctacttgtataggacaactggcctacttctttttacactgt-----tcgaagggtaaggacaaaggcaaagggaggagcacacttattacttacagtgacatatacgatatga s panTro5.chr18 65045718 219 + 78221452 gctggagtaaggagtccctttcaggaggggtgggatacagctgcctcctccccttttataagcagagaaaaatta-ttatttttctttattcctagctattgagctgtccagctacttgtataggacaattggcctacttctttttacattgt-----ttgaagggtaaggacaaaggcaaagggaggagcacacttattacttacagtgacatatacgatatga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64164804 219 + 77229886 gctggagtaaggagtccctttcaggagtggtgggatacagctgcctcctccccctttataagcagagaaaaatta-ttatttttctttattcctagctattgagctgtccagctacttgtataggacaattggcctacttctttttacattgt-----ttgaagggtaaggacaaaggcaaagggaggagcacacttattacttacagtgacatatacgatatga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384290 219 + 17472758 gctggagtaaggagtccctttcaggaggggtgggatacagctgcctcctccccctttataagcagagaaaaatta-ttatttttctttattcctagctattgagctgtccagctacttgtataggacaattggcctacttctttttacattgt-----tcgaagggtaaggacaaaggcaaagggaggagcacacttattacttacagtgacatatacgatatga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424765 218 - 152096393 gctggagtaaggagtccctttcaggacacgtgggatacagatgcctcctccccctttataagcagagaaaaatta-tt-tttttctttattcctagctattgagctgtccagctacttgtataggacaattggcctacttcttatcacattgt-----ttgaagggtaaggactaaggcaaagggaggagcacacttattacttacagtgacatatacgataaga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57374830 217 + 70235451 gctggagtaaggagtccctttcaagaagggttggatacgactgcctcctctccctttataagcagagaaaaatta-tt-tttttctttatt-ctagctattgggctgtccagacacttgtataggataattggcctacttcttatcacattgt-----tcgaagggtaaggactaaggcaaagggaggagcatacttattacctacagtgacatatatgataaga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066233 217 - 75711847 gctggagtaaggagtccctttcaagaagggttggatacgactgcctcctctccctttataagcagagaaaaatta-tt-tttttctttatt-ctagctattgggctgtccagacacttgtataggacaattggcctacttcttatcacattgt-----tcgaagggtaaggactaaggcaaagggaggagcatacttattacctacagtgacatatatgataaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625447 217 - 18804593 gctggagtaaggagtccctttcaagaagggttggatacgactgcctcctctccctttataagcagagaaaaatta-tt-tttttctttatt-ctagctattgggctgtccagacacttgtataggacaattggcctacttcttatcacattgt-----tcgaagggtaaggactaaggcaaagggaggagcatacttattacctacagtgacatatatgataaga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13236931 218 + 18905526 gctggagtaaggagtccctttcaggaggggttggatacggctgcctcctctccctttataagcagagaaaaattattt-tttttctttatt-ctagctattgggctgtccagatacttgtataggacaattggcctacttcttatcacattgt-----tcgaagggtaaggactaaggcaaagggaggagcatacttattacttacagtgacatatatgataaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065540 217 - 72318688 gctggagtaaggagtccctttcaggaggggttggatacggctgcctcctctccctttataagcagagaaaaatta-tt-tttttctttatt-ctagctattgggctgtccagatacttgtataggacaattggcctacttcttatcacattgt-----tcgaagggtaaggactaaggcaaagggaggagcatacttattacttacagtgacatatatgataaga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 402904 218 - 1517660 gctggagtaaggagtccctttcaggaggggttggatacggctgcctcctctccctttataagcagagaaaaattattt-tttttctttatt-ctagctattgggctgtccagatacttgtataggacaattggcctacttcttatcacattgt-----tcgaagggtaaggactaaggcaaagggaggagcatacttattacttacagtgacatatatgataaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499521 217 + 6513552 gctggagtaaggagtccctttcaggaggggttggatatggctgcctcctctccctttataagcagagaaaaatta-tt-tttttctttatt-ctagctattgggttgttcagatacttgtataggacaattggcctacttcttatcacattgt-----tcaaagggtaaggactaaggcaaagggaggagcatacttattacttacagtgacatatatgataaga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105267184 217 + 117903854 gctgaacgaaggagtccctttcagagggataggattgcagctgcctccttcctctttataagcagagaaaaatta-tt-tttttctttgtccctagctattaggctgtctagctacttgtataggataactggcctacttctcatcacattgt-----tctaagggtaaggactaaggcaaagggaggaaaacacctattatttgtagtgacacatataatag-c i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19455793 208 - 31320352 gctgaacgaaggagtccctttcagaggggtgggaatgcagctgcctccttcccctttataagcagaaaaaaatta-tt-tttttctttatccctagctattaggctgtctagctacttgtataggacaactggcctacttctcatcccattgccttagtctaagggtaagaactaaggcaaagggaggagaacacctattatt--------------taatat-c i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1651362 217 + 2203405 gctaaacgaaggagtccctttcagaggggtgggaatgcagctgcctccttcccctttataagcagagaaaaatga-tt-tttttctttatccctagctattaggctgtctagctacttgtataggacaatggacctacttctcatcacattgt-----tccaagggtaaggactaaggcaaagggaggagaacacctattatttgtagtgacacatataatat-c i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3603171 217 - 14941987 gctgaaggaaggagtccctttcagaagggtgggaatgcagctgcctccttcccctttataagcagagaaaaatta-tt-tttttctttatccctagctattaggctgtctagctacttgtataggacaactggcctacttctcatcacattgt-----tctaagggtaaggactaaggcaaagggaggggaacacctattatttgcagtgacacatctagtat-c i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1261143 209 - 1406956 gctggagtaaggagtccctttcaggagagttggggtgcagctgcctcctggccctttataagcagagaaaaat-a-tt-tttttctttcttcctcac--------tgtcgagctacttgcacaggacaattgatctagttctcctcacattgt-----cctaagggtaaggactaatgcaaagggaagagcatggttattatttacagtgacatatttaataaga i proCoq1.NW_012148742v1 I 718 I 24 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=183244.000000 s hg38.chr18_GL383571v1_alt 135915 23 + 198278 tctacctcgaattaacaacaccg s panTro5.chr18 65045937 23 + 78221452 tctacctcgaattaacaccaccg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165023 23 + 77229886 tctacctcgaattaacaccaccg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384509 23 + 17472758 tctacctcgaattaacaacactg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139424983 23 - 152096393 tccacttcgaattaacaacactg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375047 23 + 70235451 tctacctctaattaacaacaccg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066450 23 - 75711847 tctacctctaattaacaacaccg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625664 23 - 18804593 tctacctctaattaacaacaccg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237149 23 + 18905526 tctacctctaattaacaacacca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065757 23 - 72318688 tctacctctaattaacaactccg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403122 23 - 1517660 tctacctctaattaacaacacca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499738 23 + 6513552 tctacctctaattaacaacaccg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105267401 22 + 117903854 tccacctatgattaacaacacc- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456001 22 - 31320352 tctacctatgattaacaacgcc- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1651579 22 + 2203405 tctacctatgattaacaacacc- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3603388 22 - 14941987 tttacctatgattaacaacacc- i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1261352 24 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=1846151.000000 s hg38.chr18_GL383571v1_alt 135938 186 + 198278 tcatgtgcgcttttaggtt-aaaattaataaaaatgaatgttaaaaatccaacaCACACATAACACACAACCCTGACATTCTACTCATAGGTATTTAGCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGAAATata----catagaacaaaaattgataaa---actaagaa----acaaagccatcttagt---aga s panTro5.chr18 65045960 186 + 78221452 tcatgtgcgcttttaggtt-aaaattaataaaaatgaatgttaaaaatccaacaCACACATAACACACAACCCTGACATTCTGCTCATAGGTATTTAGCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGAAATata----catagaacaaaaattgataaa---actaagaa----acaaagccatcttagt---aga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165046 186 + 77229886 tcatgtgcgcttttaggtt-aaaattaataaaaatgaatgttaaaaatccaacaCACACATAACACACAACCCTGACATTCTACTCATAGGTATTTAGCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGAAATATA----CATAGAACAAAAATTGATAAA---ACTAAGAA----ATAAAGCCATCTTAGT---AGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384532 186 + 17472758 tcatgtgcgtttttaggtt-aaaattaataaaaatgaatgttaaaaatccaacaCACACATAACACACAACCCTGACATTCTACTCATAGGTATTTAGCCTATATGAAT-----GAGAGAAGTAAATTTAATCGCAGAAATATA----CATAGAACAAAAATTGATAAA---ACTAAGAA----ACAAAGCCATCTTAGT---AGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425006 183 - 152096393 tcacgtgcgcttttaggtt-aaaatttatatagatgaatgttaaaaatccaacaCACATATAACACACAACCCTGACATTCTACTCATAGGTATTTAGCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGAAATATA----CATAGAACAAAAATGGATAAA---ACTAGGAA----ACAAAGCCATCT---T---AGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375070 187 + 70235451 tcatgtgcgcttttaggtt-taaattaatgaagatggatgttaaaaatcctacaCACACGTAACACACAACCCTGACATTCTACTCATAGGTATTTACCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATATA----CATAGAACAAAAATTGATAAA---ACTAGGAAATAGACAAAGCCATCT---C---AGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066473 187 - 75711847 tcatgtgcgcttttaggtt-taaattaatgaagatggatgttaaaaatccaacaCACACGTAACACACAACCCTGACATTCTACTCATAGGTATTTACCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATATA----CATAGAACAAAAATTGATAAA---ACTAGGAAATAGACAAAGCCATCT---T---AGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625687 187 - 18804593 tcatgtgcgcttttaggtt-taaattaatgaagatggatgttaaaaatccaacaCACACGTAACACACAACCCTGACATTCTACTCATAGGTATTTACCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATata----catagaacaaaaattgataaa---actaggaaatagacaaagccatct---t---aga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237172 190 + 18905526 tcatgtgtgcttttaggtt-taaattaataaaggtgaatgttaaaaatccaacaCACACGTAACACACAACCCTGACATTATACTCATAGGTATTTACCCTACATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATata----catagaacaaaaattgataaa---actaggaaacagacaaagccatcttagt---aga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065780 190 - 72318688 tcatgtgtgcttttaggtt-taaattaataaagatgaatgttaaaaatccaacaTACACGTAACACACAACCCTGACATTCTACTCAGAGGTATTTACCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATata----catagaacaaaaattgataaa---actaggaaacagacaaagccatcttagt---aga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403145 190 - 1517660 tcatgtgtgcttttaggtt-taaattaataaagatgaatgttaaaaatccaacaCACACGTAACACACAACCCTGACATTCTACTCATAGGTATTTACCCTATATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATata----catagaacaaaaattgataaa---actaggaaacagacaaagccatcttagt---aga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499761 190 + 6513552 tcatgtgagcttttaggtt-taaattaataaagatgaatgttaaaaatccaacaCACACATAACACACAACCCTGACATTCTACTCATAGGTATTTACCCTGTATGAAT-----GAGAGAAGTAAATTTAATAGCAGATATata----catagaacaaaaattgataaa---actaggaaacagacaaagccatcttagt---aga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105267423 189 + 117903854 tcatgcacgcttttaggttaaaaattaataaagataaatgttaaaaattcaacacacacata--acccaaccctggcgttctactcattggtatttaGCATACATCAAT-------GAGAAGTAaatataatagcagaaatata----cacagagcaaaaattgacacaactactaggaa----acaaagccatcttaataggaga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456023 188 - 31320352 tcatgcatgctttcaggtt-aaaattaataaagataaatgttaaaaattcaacacacacata--acacaaccctggcattctactcataggtatttaGACTACATCAAT-------GAGAAGTAaatataagagcagaaatata----catagagcaaaaattgacacaactactaggaa----acaaagccatcttagtaggaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1651601 188 + 2203405 tcatgtgtgcttttaggtt-aaaagtaatacagataaatgttaaaaattcaacacacacata--acacaaccctggcattctactcataggtatttaGACTACATTAAT-------GAGAAGTAaatataatagcagaaatata----catagagcaaaaattgacacaactactaggaa----acaaagccatcttaataggaga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3603410 188 - 14941987 tcatgagcgcttttaggtt-aaaattaataaagataaatgttaaaaattcaacacacacata--atacaaccctggcattctactcataggtatttagcctacatcaat-------gagaaGTAaatataatagcagaaatata----catagagcaaaaattgacacaactactaggaa----acaaagccatcttaataagaga i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1261376 198 - 1406956 tcatgtgtgcttttaggtt-aaaattaacaaagacaaatgttaaaaacccaaTGCACACACAACACGCAACCCTGACATTCCACTCCTAGGTATTTAGCCAATAGGAACTAAAGGAGAGAAGTAAatctaatgatagaaacataaatgtataaagcaaaaactgataaaactattaggaa----acatagccatctttgt---agg i proCoq1.NW_012148742v1 I 24 I 39 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=240221.000000 s hg38.chr18_GL383571v1_alt 136124 29 + 198278 ttttaaagcatctctcagagtt----aaagcgt s panTro5.chr18 65046146 29 + 78221452 ttttaaagcatctctcagagtt----aaagcgt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165232 29 + 77229886 TTTTAAAGCATCTCTCAGAGTT----AAAGCGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384718 29 + 17472758 TTTTAAAGCATCTCTCAGAGTT----AAAGCGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425189 31 - 152096393 TTGTAAAGCATCTCTCAGAGTTAG--AAAAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375257 33 + 70235451 TTTTAAAGCATCTCTCAGAGTTAGAAAAAAGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066660 33 - 75711847 TTTTAAAGCATCTCTCAGAGTTAGAAAAAAGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625874 33 - 18804593 ttttaaagcatctctcagagttagaaaaaagtg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237362 33 + 18905526 ttttaaagcatctctcacagttagaaaaaagtg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60065970 33 - 72318688 ttttaaagcatctctcacagttagaaaaaagtg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403335 33 - 1517660 ttttaaagcatctctcacagttagaaaaaagtg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499951 31 + 6513552 ttttaaagcatctctc--agtTAGAAAAAAGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105267612 33 + 117903854 ttttaaagcatctctccaagttagaaaaaactg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456211 33 - 31320352 ttttaaagcatctctccaagttagaaaaaactg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1651789 33 + 2203405 ttttaaagcatctctccaagttagaaaaaactg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3603598 33 - 14941987 ttttaaagcacctctccaagttagaaaaaactg i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1261574 39 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=3026033.000000 s hg38.chr18_GL383571v1_alt 136153 298 + 198278 ----------tgtgtgtgtacacccacac--atgtgttgttgatgacttacacaatttaaacaatgtgacttattaatggacatatagaaaacactatgcccaaacatttcagaacgcgctttgttttcaaggacacataaatcatttccaattattgaccatatgcagaaccataaagtgagtttc----------aaaaaatctccaagtattaaaataacacacaata-tttt---ataacagtgctagcaaataaacataactactaatccctatgtatttggaaattaagagtgataaatttaaagcatgcataaaaat s panTro5.chr18 65046175 296 + 78221452 ----------tgtgtgtgtacacccacac----gtattgttgatgacttacacaatttaaacaatgtgacttattaatggacatatagaaaacactatgcccgaacatttcagaatgcactttgttttcaaggacacataaatcatttccaattattgaccatatgcagaaccataaagtgagtttc----------aaaaaatctccaagtattaaaataacacacaata-tttt---ataacagtgctagcaaataaacataactactaatccctatgtatttggaaattaagagtgataaatttaaagcatgcataaaaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165261 296 + 77229886 ----------TGTGTGTGTACACCCACAC----GTGTTGTTGATGACTTACACAatttaaacaatgtgacttattaatggacatatagaaaacactatgcccgaacatttcagaatgcactttgttttcaaggacacataaatcatttccaattattgaccatatgcagaaccataaagtgagtttc----------aaaaaatctccaagtattaaaataacacacaata-tttt---ataacagtgctagcaaataaacataactactaatccctatgtatttggaaattaagagtgataaatttaaagcatgcataaaaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5384747 298 + 17472758 ----------TGTGTGTGTACACCCACAC--ATGTGTTGTTGATGACTTACACAatttaaacaatgtgacttattaatggtcatgtagaaaacactatgcccaaacatttcagaatgcactttgttttcaaggacgcgtaaatcatttccaattattgaccatatgcagaaccataaagtgagtttc----------aaaaaatctccaagtattaaaataacacacaata-tttt---ataacagtgctagcagataaacataactactaatccctatgtatttggaaattaagagtgataaatttaaagcatgcataaaaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425220 294 - 152096393 ----------TGTGTGTGCACACCCACAC----GTGTTGTTGATGACTTACACAATTTgaacaatgtgacttattaatggacatatagaaaacactatgcccaaacatttcagaatacactttgttttcaaggacacataaatcatttccaattattgaccatatgcagaaccataaagtgagtttc----------aaaaaatctccaagtattaaaataacacacaaca-tttt---ataacagtgctatcaaataaacataactactagtccccatgtatttggaaatt--gagtgataaatttaaagcatgcataaaaat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375290 297 + 70235451 ----------TGTGTGTGCACACTCACAC--ATGTCTTGTTGACGACTTACACAATTTAAACAATGTCACCTATtagtggacatatagaaaacactatgcccaaacatttcagaatgtactttgttttcaaggacacattaataatttccaattattgaccatatgcagaaccacaaagtgagtttc----------aaaaaatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactaatctctat-tatctggaaattaagagtgataaatttaaagcatgcataaaaat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066693 297 - 75711847 ----------TGTGTGTGCACACTCACAC--ATGTCTTGTTGACGACTTACACAATTTAAACAATGTCACCTATtagtggacatatagaaaacactatgcccaaacatttcagaatgtactttgttttcaaggacacattaataatttccaattattgaccatatgcagaaccacaaagtgagtttc----------aaaaaatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactaatctctat-tatctggaaattaagagtgataaatttaaagcatgcataaaaat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13625907 297 - 18804593 ----------tgtgtgtgcacactcacac--atgtcttgttgacgacttacacaatttaaacaatgtcacctattagtggacatatagaaaacactatgcccaaacatttcagaatgtactttgttttcaaggacacattaataatttccaattattgaccatatgcagaaccacaaagtgagtttc----------aaaaaatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactaatctctat-tatctggaaattaagagtgataaatttaaagcatgcataaaaat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237395 298 + 18905526 ----------tgtgtgtacacactcacac--atgtgttgttgatgacttaaacaatttaaacaatgtgacctattaccagacatatagaaaacactatgctcaaacatttcagaatgcactttgttttcaaggacacattaataatttccaattattgacaatatgcagaaccataaggtaagtttc----------aaaacatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactattccctatgtatctggaaattaagagtgataaattgaaggcatgcataaaaat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066003 296 - 72318688 ----------tgtgtgtacacactcacac----gtgttgttgatgacttacacaatttaaacaatgtgacctattaccggacatatagaaaacactatgctcaaacatttcagaatgcactttgttttcaaggacacattaataatttccaattattgacaatatgcagaaccataaggtaagtttc----------aaaaaatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactattccctatgtatctggaaattaagagtgataaattgcaggcatgcataaaaat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403368 298 - 1517660 ----------tgtgtgtacacactcacac--atgtgttgttgatgacttacacaatttaaacaatgtgacctattaccggacatatagaaaacactatgctcaaacatttcaggatgcactttgttttcaaggacacattaataatttccaattattgacaatatgcagaaccataaggtaagtttc----------aaaacatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactattccctatgtatctggaaattaagagtgataaattgaaggcatgcataaaaat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3499982 293 + 6513552 ----------TGTGTGTGCACACTCACAC----GTGTTGTTGATGAGTTacacaatttaaacaatgtgacctattaccagacacatagaaaacactatgcccaaacatttcagaatgcactttgttttcaaggacac---aataatttccaattattgacaatatgcagaaccataaggtgagtttc----------aaaaaatctccaagtattaaaataatacacaata-tttt---atcaatgtgctatcaaataaacataactactattccctatgtatctggaaattaagagtgataaattgaaggcatgcataaaaat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105267645 286 + 117903854 ----------tgtgtgtacaccctcacca--atgtgttgttgatg---------atttaaataatgtgacctcctaatggatatatagaaaacactgtgtccaaacatttcagaatgcactttgttttcaaggacacataaataatttccaattattgaccatacgcagaaccataaagtcagtttc----------aaaaaatctccaagtattaaaataatatgcaatattttt---atcacagtgctatcaaa-aaac---actactaatccctatgtatttggaaattaataatgataaatttaaagcatgcataaaagt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456244 308 - 31320352 ----------tgtgtgtagacactcacca--atgtgttgttgatgacttatacaatttaaataatgtgataccctaatggacatatagaaaacactacgcccaaacatttcagaatgcactttgttttcaaggatacataaataatttccaattattgaccatatgcagaaccataaagtcagtttcaaaaaaaaaaaaaaaatctccaagtattaaaataatatacaatattttt---atcacagtgctatcaaa-aaacataactactaatccctaagtatttggaaattatgagtgataaatttaaagcatgcataaaaat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1651822 297 + 2203405 ----------tgtgtacgcacacccacca--atgtgttgttgatgacttatacaatttaaataatgtgatctcctaatggacatatagaaaacactatgcccaaacatttcagaatgcactttgtttgcaaggacatataaataatttccaattattgaccatatgcagaaccataaagtcagtttc----------aaaaaatctccaagtattaaaataatatacaatattttt---atcacagtgctatcaaa-aaacataactactaatctctatgt-tttggaaattaagagtgataaatctaaagcatgcataaaaat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3603631 293 - 14941987 ----------tgtgtgtacacactcacca--atgtgttgttgatgacttatacaatttaaataatgtgatctcctaatggacatatagaaaacactatgcccaaacatttcagaatacactttgttttcaaggacacataaataatttccagttattgaccatatgcagaatgataaagtgagtttc----------aaaaaatctccaggtat-----taatatacaatattttt---atcacagtgctatcaaa-aaacataactactaatccctatgtatttggaaattaagagtgataaatttaaagcatgcataaaaat i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1261613 311 - 1406956 tgtgtgtgtatgtatgtgCATGCACACATGTATGTGCTGGTGATGATACATACAATTTAAACAATGTGGCCTATtaatggatgcataggaaagattgcac-caaccactgcagaatgcactttgttttcaaggacacataaatgatttctaattattgactatatgcagaaccataaactaaatttc----------aaagaatctctaagtattgaaataatatagcatg-ttttttaatcacagtgctatcaaa-aaacataactaccaatccccatatatgtggaaattaagaattataactttaaagcatgcattaaaat i proCoq1.NW_012148742v1 I 39 I 111 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=1088506.000000 s hg38.chr18_GL383571v1_alt 136451 113 + 198278 aataataaaag--agaaaataatctgaacagtgaaaatatcatacatcaaaacttacaggatgcagttaaagcattgcttCTCCTCAGTCACCTTTTTAAAATTCTGACTTCCCC s panTro5.chr18 65046471 111 + 78221452 aataataaa----agaaaataatctgaacagtgaaaatatcatacatcaaaacttacaggatgcagttaaagcattgcttCTCCTCAGTCACCTTTTTAAACTTCTGACTTCCCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165557 115 + 77229886 aataataaaagatagaaaataatctgaacagtgaaaatatcatacatcaaaacttacaggatgcagttaaagcattgcttCTCCTCAGTCACCTTTTTAAACTTCTGACTTCCCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385045 114 + 17472758 aataataaaagatagaaaataatctgaacagtgaaaatatcatacat-gaaacttacaggatgcagttaaagcattgcttCTCCTCAGTCACCTTTTTAAACTTCTGACTTCCCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425514 110 - 152096393 aataataaaaaatagaaaataatctgaacagtgaaaatat-----atcaaaacttacaggatgcaattaaagcattgcttCTCCTCAGTCATCTTTTTAAACTTCTGACTTCCCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375587 114 + 70235451 aacaataaaaa-tagaaaataatctgaacagtgaaaatatcatatattaaaacttacaggatgcaattaaagcattgcttCTCTTCAGTCACCTTTTTAAACTTCTGACTTCCCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63066990 114 - 75711847 aacaataaaaa-tagaaaataatctgaacagtgaaaatatcatatattaaaacttacaggatgcaattaaagcattgcttCTCTTCAGTCACCTTTTTAAACTTCTGACTTCCCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626204 114 - 18804593 aacaataaaaa-tagaaaataatctgaacagtgaaaatatcatatattaaaacttacaggatgcaattaaagcattgcttCTCTTCAGTCACCTTTTTAAACTTCTGACTTCCCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237693 114 + 18905526 aacaataaaaa-tagaaaataatctgaacagtgaaaatatcatatatcaaaacttacaggatgcaattaaagcattgcttCTCCTCAGTCACCTTTTTAAACTTCTGACTTCCCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066299 114 - 72318688 aacaataaaaa-tagaaaataatctgaacagtgaaaatatcatatatcaaaacttacaggatgcaattaaagcattgcttCTCCTCAGTCACCTTTTTAAACTTCTGACTTCCCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403666 114 - 1517660 aacaataaaaa-tagaaaataatctgaacagtgaaaatatcatatatcaaaacttacaggatgcaattaaagcattgcttCTCCTCAGTCACCTTTTTAAACTTCTGACTTCCCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500275 114 + 6513552 aacaataaaaa-tagaaaataatctgaacagtgaaaatattatatatcaaaacttacaggatgcaattaaagcattgcttCTCCTCAGTCACCTTTTTAAACTACTGACCTCCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105267931 112 + 117903854 aac--taaaaa-tacaatataatctgaacagtgaaaatatcacatatcaaaacgtataggatgcaattaaagcattgcttCTCCTCAGTTACCTTTTGAAACTTCTGCCTTCCCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456552 114 - 31320352 aacaataaaaa-tagaacataatctgaacagtgaaaatatcacatatcaaaacgtataggatgcaattaaagcattgcttCTCCTCAATTACCTTTTTAAACTTCTGCCTTCCCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1652119 111 + 2203405 aa---taaaaa-tagaacataatctgaacagtgaaaatatcacatatcaaaatgtataggatgcaattaaagcattgcttCTCCTCAATTACCTTTTTAAACTTCTGCCTTCCTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3603924 114 - 14941987 aacaataaaaa-tagaacataatctgaacagtgaaaatatcacatatcaaaatgtataggatgcaattaaagcactgcttCTCCTCAGTTACCTTTTTAAACTTCTGCCTTCCCC i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1261924 111 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=480398.000000 s hg38.chr18_GL383571v1_alt 136564 54 + 198278 TTAAATATTAGCATTCCCAGAATTTATACCTTATTTATAATTTGTTCCATGCTA s panTro5.chr18 65046582 54 + 78221452 TTAAATATTAGTATTCCCAGAATTTATACCTTATTTATAATTTGTTCCATGCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165672 54 + 77229886 TTAAATATTAGTATTCCCAGAATTTATACCTTATTTATAATTTGTTCCATGCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385159 54 + 17472758 TTAAATATTAGTATTCCCAGAATTTATGCCTTATTTATAATTTGTTCCATGCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425624 54 - 152096393 TTAAATATTAGTATTCCCAGAATTTATACCTTATTTATAATTTGTTCCATGCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375701 39 + 70235451 TTAAAT---------------ATATATATCTTATTTATAATTTTTTCCATGCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067104 39 - 75711847 TTAAAT---------------ATATATATCTTATTTATAATTTTTTCCATGCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626318 39 - 18804593 TTAAAT---------------ATATATATCTTATTTATAATTTTTTCCATGCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237807 54 + 18905526 TTAAACATTAGTATTTCCAGAATATATACCTTATTTATAATTTGTTCCATGCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066413 54 - 72318688 TTAAACATTAGTATTACCAGAATATATACCTTATTTATAATTTGTTCCATGCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403780 54 - 1517660 TTAAACATTAGTATTTCCAGAATATATACCTTATTTATAATTTGTTCCATGCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500389 54 + 6513552 TTAAATATTAGTATTTCCAGAATATATACCTTATTTATAATTTGTTCCATGCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105268043 54 + 117903854 TTAAATATTAGTTTTCCCAGAATTTGTATCTTACTTACAACTTTTTCCAGGTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456666 54 - 31320352 TTAAATATTAGTTTTCCCAGAATTTATATCTTACTTATAACTTTTTCCATGTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1652230 54 + 2203405 TTAAATATTAGTTTTCCCAGAATTTATATCTTACTTATAACTTTTTCCATGTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3604038 53 - 14941987 TTAAATATTAG-TTTCCCAGAATTTATATCTTACTTATAACTTTTTCCATGCTA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262035 54 - 1406956 TTAAATATTGGTATTCCCAGAATTTATACCTCATTTATAGCTTTTTCCATGCTA i proCoq1.NW_012148742v1 I 111 I 219 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=1228669.000000 s hg38.chr18_GL383571v1_alt 136618 130 + 198278 TCTA---TAATTGAGTGATAGCATTCCAGTACTGGTTTAACCCATCAA---------CTAC-ATACCAATGATTTCCTAATTCTATTTCTATTTCTGGCTGTAAAGCGCTTGGATTTTCTAATGAGGCCGATTTACTAACAAC s panTro5.chr18 65046636 130 + 78221452 CCTA---TAATTGAGTGATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTAC-ATACCAATGATTTCCTAATACTATTTCTATTTCTGGCTGTAAAGCGCTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165726 130 + 77229886 CCTA---TAATTGAGTGATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTAC-ATACCAATGATTTCCTAATACTATTTCTATTTCTGGCTGTAAAGCGCTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385213 130 + 17472758 CCTA---TAATTGAGTGATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTAC-ATACCAATGATTTCCTAATACTATTTCTATTTCTGGCTGTAAAGCGCTTGGATTTTCTAATGAGGCCAATTTACTAACAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425678 130 - 152096393 CCTA---TTCTTGAGTGATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTAC-ATACTAATGATTTCCTAATACTATTTCTATTTCTGACTATAAAGCGCTTGGATTTTCTAATGAGGCCGATTTACTAACAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375740 133 + 70235451 CCTATTCTTCTTGAGTGATAGCATTCCAGTACTAGTTTAACCCATCAG---------CTAC-ATACTAATGATTTCCTAATACTATTTCTATTTCTGACCGTAAAACACTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067143 133 - 75711847 CCTATTCTTCTTGAGTGATAGCATTCCAGTACTAGTTTAACCCATCAG---------CTAC-ATACTAATGATTTCCTAATACTATTTCTATTTCTGACCGTAAAACACTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626357 133 - 18804593 CCTATTCTTCTTGAGTGGTAGCATTCCAGTACTAGTTTAACCCATCAG---------CTAC-ATACTAATGATTTCCTAATACTATTTCTATTTCTGACCATAAAACACTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237861 130 + 18905526 CCTA---TTCTTGAGTGATAGCATTCCAGTACTAGTTTAACCCATCAG---------GTAC-ATACTAATGGTTTCCTAATACTATTTCTATTTCTGACTATAAAACACTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066467 133 - 72318688 CCTATTCTTCTTGAGTGATAGCATTCCAGTACTAGTTTAACCCATCAG---------GTAC-ATACTAATGGTTTCCTAATACTATTTCTATTTCTGACTATAAAACGCTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403834 130 - 1517660 CCTA---TTCTTGAGTGATAGCATTCCAGTACTAGTTTAACCCATCAG---------GTAC-ATACTAATGGTTTCCTAATACTATTTCTATTTCTGACTATAAAACACTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500443 133 + 6513552 CCTATTCGTCTTGAGTGATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTAC-ATACTAATGGTTTCCTAATACTATTTCTATTTCTGACTGTAAAACACTTGGATTTTCTAATGAGGCCGATTTACTAACAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105268097 133 + 117903854 ACTATTCTTCTTGAGTGATAGCATTCCAGTACCGGTTTAACCCATCAG---------CCATAATACTAATGATTTGCTAAT-CTATTTCCATTTCCGGCTGTAAAATGCTTGGATTTACTAACGAGGCAAATTTACTAACAAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456720 134 - 31320352 GCTATTCTTCTTTAGTGATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTATAATACTAATGATTTGCTAATACTATTTCTATTTCTGGCTGTAAAATGCTTGGATTTACTAATGAGGCAAATTTACTAACAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1652284 143 + 2203405 GCTATTCCTCTTGAGTGACAGCATTCCAGTGCTGGTTTAACCCATCAGCTATAATACCTATAATACTAATGATTTGCTAATACTATTTCTATTTTTGGCTGTAAAATGCTTGGATTTACTAATGAGGCAAATTTACTAACAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3604091 134 - 14941987 GCTATTCTTCTTGAGTAATAGCATTCCAGTACTGGTTTAACCCATCAG---------CTATAATACTAATGATTTGCTAATACTATTTCTATTTCTGGCTGTAAAATGCTTGGATTTACTAATGAGGCAAATTTACTAACAAC i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262089 219 - 1406956 I e dasNov3.JH575754 482054 6947 - 2150887 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=1059821.000000 s hg38.chr18_GL383571v1_alt 136748 104 + 198278 CCAGAAGCTGACTGAGAATGCACCCATTTTATTCTTCCTCTCTTT-TACCTTTCTTTAATTT-AGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAT-GAGTGCCT s panTro5.chr18 65046766 105 + 78221452 CCAGAAGCTGACTGAGAATGCATCCATTTTATTCTTCCTCTCTTT-TACCTTTCTTTAATTTAAGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAT-GAGTGCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165856 105 + 77229886 CCAGAAGCTGACTGAGAATGCATCCATTTTATTCTTCCTCTCTTT-TACCTTTCTTTAATTTAAGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAT-GAGTGCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385343 104 + 17472758 CCAGAAGCTGACTGAGAATGCATCCATTTTATTCTTCCTCTCTTT-TACCTTTCTTTAATTT-AGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAT-GAGTGCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425808 101 - 152096393 CCAGAAGCTGACTGAGAATGCATCCATTTTATTCTTCCTCTCTTT-TACCT---TTTAATTT-AGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAT-GAATGCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375873 104 + 70235451 CCAGAAGCTGGCTGAGAATGTGTCCATTTTATTCTTTCTCTCTTT-ACCCTTTCTTTAATTT-AGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAG-GAATGCGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067276 104 - 75711847 CCAGAAGCTGGCTGAGAATGTGTCCATTTTATTCTTTCTCTCTTT-ACCCTTTCTTTAATTT-AGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAG-GAATGCGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626490 104 - 18804593 CCAGAAGCTGGCTGAGAATGTGTCCATTTTATTCTTTCTCTCTTT-ACCCTTTCTTTAATTT-AGAGGTAAATG--------GAAGTGTAAAATGAAGAAAACAAG-GAATGCGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13237991 104 + 18905526 TCAGAAGCTGGCTGAGAATGTGTCCATTTTATTCTTCCTCTCTTT-AACCTTTCTTTAATTT-AGAAGTAAATG--------GAAGTGTAAAATGAAGAAAACAAG-GAATGCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066600 104 - 72318688 TCAGAAGCTGGCTGAGAATGTGTCCATTTTATTCTTCCTCTCTTT-AACCTTTCTTTAATTT-AGAGGTAAATG--------AAAGTGTAAAATGAAGAAAACAAG-GAATGCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 403964 104 - 1517660 TCAGAAGCTGGCTGAGAATGTATCCATTTTATTCTTCCTCTCTTT-AACCTTTCTTTAATTT-AGAAGTAAATG--------GAAGTGTAAAATGAAGAAAACAAG-GAATGCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500576 104 + 6513552 CCAGAAGCTAGCTGAGAATGTGTACATTTTATTCTTCCTCTCTTT-AACCTTTCTTTAATTT-AGAGGTAAATG--------GAAGCGTAAAATGAAGAAAACAAG-GAATGCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105268230 104 + 117903854 CCAGAAGCTGGCTGAGAATGTGTCCATTTTATTCTTCCTCTATTT-TACCTTTCTTTGATTT-AGAGGTAAATG--------GATGTGTAAAATGAAGAAAATAAT-GAATGCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456854 102 - 31320352 CCAGAAGCTAGCTGAGAATGTGTCCATTTTATTCTTCTTC--TTT-TACCTTTCTTTGATTT-AGAGGTAAATG--------GATGTGTAAAATGAAGAAAATAAT-GAATGTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1652427 104 + 2203405 CCAGAAGCTAGCTGAGAATGTGTCCATTTTATTCTTCCTCTCTTT-TACCTTTCTTTGATTT-AGAGGTAAATG--------GATGCGTAAAATGAAGAAAATAGT-GAATGTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3604225 112 - 14941987 CCAGAAGCTGGCTGAGAATGTGTCTACTTTATTCTTCCTCTCTTT-TACCTTTCTTTGATTT-AGAGGTAAATGAAGAAAATAATGTGTAAAATGAAGAAAATAAT-GAATGTCT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 489001 107 - 2150887 CCAGGAGCTGGCTGAGATTTTGTCCATTTTATTCTCCTTCTCTTTCTATCTGTCTTTAATAAGAGCAGTATATG--------GAGATGGGGAAAGTGGAAAACAATAAAATGCCT i dasNov3.JH575754 I 6947 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262089 219 - 1406956 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=668837.000000 s hg38.chr18_GL383571v1_alt 136852 68 + 198278 TGTGAAATAAGTACCTTTGGA-----------GTTTTTCTTGGTTCCTCACTATAAGACCTCAGGCAAATCTAT----TGGAA s panTro5.chr18 65046871 68 + 78221452 TGTGAAATAACTACCTTTGGA-----------GTTTTTCTTGGTTCCTCACTATAAGACCTCAGGCAAATCTAT----TGGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64165961 68 + 77229886 TGTGAAATAACTACCTTTGGA-----------GTTTCTCTTGGTTCCTCACTATAAGACCTCAGGCAAATCTAT----TGGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385447 59 + 17472758 TGTGAA--------TCTTGGA-----------GTTT-TCTTGGTTCCTCACTATAAGACCTCAGGCAAATCTAT----TGGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425909 68 - 152096393 TGTGAAATAACTATCTTTGGA-----------GTTTTTCTTGGTTCCTCACTATACGACCTCAGGCAAATCTAT----TGGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57375977 68 + 70235451 TGTGAAACAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTCAGGCAGATCTAT----TAGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067380 68 - 75711847 TGTGAAACAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTCAGGCAGATCTAT----TAGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626594 68 - 18804593 TGTGAAACAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTCAGGCAGATCTAT----TAGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238095 68 + 18905526 TGTGAAACAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTTAGGCAAATCTAT----TAGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066704 68 - 72318688 TGTGAAACAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTCAGGCAAATCTGT----TAGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404068 68 - 1517660 TGTGAAACAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTTAGGCAAATCTAT----TAGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500680 68 + 6513552 TGTGAAATAACTACTTTTGGA-----------TTTTTTCTTGGTTCCTCACTTTATGACCTCAGGCAAATCTAT----TAGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105268334 67 + 117903854 TGTGAAATAACTACGTTTGGA------------TTTTTCTTGGCTCTTCATTATATTACCCCCAGTAAATCTAT----TAGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19456956 68 - 31320352 TGTGAAATAACTACGTTTGGA-----------TTTTTTCTTGGCTCTTCACTATATTAGCCCCGGCAAATCTAT----TAGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1652531 68 + 2203405 TGTGAAATAACTATGTTTGGA-----------TTTTTTCTTGGTTCTTCACTATATTACCCCTGGCAAACCTAT----TAGAA i cebCap1.NW_016107689v1 C 0 I 835 s aotNan1.NW_018502140v1 3604337 66 - 14941987 TGTGAAATAACTACATTTGGA-----------TTTTTTCTTGGCTCTTCACTATATTACCCCTGGCAAATC--T----TAGAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262308 72 - 1406956 TGTAAAATAAAGACCTTTGGA-----------TTTTTTCCTGGTTCCTCACTAAATGACCTCGGGCAAAACTATAATGCAGAA i proCoq1.NW_012148742v1 I 219 C 0 s dasNov3.JH575754 489108 79 - 2150887 TATAAAATAGCCAAATTTTGGGTTGTTTTTTTTTTTTTTTTGGTTCTTCTCTAAAGAATTTTTGGCAAGAATAT----CATAC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=32062.000000 s hg38.chr18_GL383571v1_alt 136920 3 + 198278 AGT s panTro5.chr18 65046939 3 + 78221452 AGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166029 3 + 77229886 AGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385506 3 + 17472758 AGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425977 3 - 152096393 AGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376045 3 + 70235451 AGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067448 3 - 75711847 AGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626662 3 - 18804593 AGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238163 3 + 18905526 AGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066772 3 - 72318688 AGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404136 3 - 1517660 AGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500748 3 + 6513552 AGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105268401 3 + 117903854 AGt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19457024 3 - 31320352 AGt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653434 3 + 2203405 AGT i cebCap1.NW_016107689v1 I 835 C 0 s aotNan1.NW_018502140v1 3604403 3 - 14941987 AGt i aotNan1.NW_018502140v1 C 0 I 991 s proCoq1.NW_012148742v1 1262380 3 - 1406956 AGT i proCoq1.NW_012148742v1 C 0 C 0 s dasNov3.JH575754 489187 2 - 2150887 AA- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=79598.000000 s hg38.chr18_GL383571v1_alt 136923 7 + 198278 TAAGGAA- s panTro5.chr18 65046942 7 + 78221452 TAAGGAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166032 7 + 77229886 TAAGGAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385509 7 + 17472758 TAAGGAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425980 7 - 152096393 TAAGGAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376048 7 + 70235451 TAAGGAA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067451 7 - 75711847 TAAGGAA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626665 7 - 18804593 TAAGGAA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238166 7 + 18905526 TAAGGAA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066775 7 - 72318688 TAAGGAA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404139 7 - 1517660 TAAGGAA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500751 7 + 6513552 TAAGGAA- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105268404 7 + 117903854 taaggaa- i calJac3.chr13 C 0 I 816 s saiBol1.JH378121 19457027 7 - 31320352 taaggaa- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653437 7 + 2203405 TAAGGAA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605397 7 - 14941987 TAAGGAA- i aotNan1.NW_018502140v1 I 991 C 0 s proCoq1.NW_012148742v1 1262383 7 - 1406956 GAATAAA- i proCoq1.NW_012148742v1 C 0 C 0 s dasNov3.JH575754 489189 7 - 2150887 -AAAGAAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=13923.000000 s hg38.chr18_GL383571v1_alt 136930 1 + 198278 A s panTro5.chr18 65046949 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166039 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385516 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425987 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376055 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067458 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626672 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238173 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066782 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404146 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500758 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269227 1 + 117903854 A i calJac3.chr13 I 816 C 0 s saiBol1.JH378121 19457034 1 - 31320352 a i saiBol1.JH378121 C 0 I 924 s cebCap1.NW_016107689v1 1653444 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605404 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262390 1 - 1406956 A i proCoq1.NW_012148742v1 C 0 C 0 s dasNov3.JH575754 489196 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=151106.000000 s hg38.chr18_GL383571v1_alt 136931 12 + 198278 CTTTCTT-GGGTT s panTro5.chr18 65046950 13 + 78221452 CTATCTTAGGGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166040 13 + 77229886 CTTTCTTAGGGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385517 13 + 17472758 CTTTCTTAGGGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139425988 13 - 152096393 TTTTCTTAGGGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376056 13 + 70235451 CTTTCTTAGGGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067459 13 - 75711847 CTTTCTTAGGGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626673 13 - 18804593 CTTGCTTAGGGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238174 13 + 18905526 CTTTCTTAGGGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066783 13 - 72318688 CTTTCTTAGGGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404147 13 - 1517660 CTTTCTTAGGGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500759 13 + 6513552 CTTTCTTAGGGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269228 13 + 117903854 CTTTCTTAGGGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19457959 13 - 31320352 CTTTCTTAGGGTT i saiBol1.JH378121 I 924 C 0 s cebCap1.NW_016107689v1 1653445 13 + 2203405 CTTTCTTAGGGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605405 13 - 14941987 CTTTCTTAGGGTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262391 13 - 1406956 CTTTCTTAAGATT i proCoq1.NW_012148742v1 C 0 C 0 s dasNov3.JH575754 489197 10 - 2150887 ---CTTTAAGATT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e canFam3.chr1 112308087 469 - 122678785 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=2191937.000000 s hg38.chr18_GL383571v1_alt 136943 198 + 198278 TTGAAATCCAAATCCTAAACATCATCACTTCTACTGAGC--CAGATTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGACATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAGAATGTAAGAGGCTGAGAG----TGGTCAGCGCTAGCCATGT-GTAGGTCTGTCACAGTGT s panTro5.chr18 65046963 198 + 78221452 TTGAAATCCAAATCCTAAACATCATCACTTCTACTGAGC--CAGATTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGACATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAGAATGTAAGAGGCTAAGAG----CAGTCAGCGCTAGCCATGT-GTAGGTCTGTCACAGTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166053 198 + 77229886 TTGAAATCCAAATCCTAAACATCATCACTTCTACTGAGC--CAGATTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGACATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAGAATGTAAGAGGCTAAGAG----CAGTCAGCGCTAGCCATGT-GTAGGTCTGTCACAGTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385530 198 + 17472758 TTGAAATCCAAATCCTAAACATCATCACTTCTACTGAGC--CAGATTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGACAT-TGGGCCTGCTTTAGCTCCTGAAGAAAAAC---------AGAGAATGTAAGAGGCTAAGAG----CGGTCAGCGCTAGCCATGT-GTAGGTCTGTCACAGTGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426001 197 - 152096393 TTGAAATCCAAATCCTAAACATGATCACTTCTACTGAGC--CAGATTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTCCTGGTGAACTATTCAAGGAACTAGACATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAGATTGTAAGAGGCTAAGAG----TGGTCAGCGCTAGCCATGT-GTA-GTCTGTCACAGTGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376069 194 + 70235451 TTGAAATCCAAATCCTAAACACCATCACTTCTACTGAGC--CAGCTTTAAAGTAAACATCACAATG------AGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCGGCACTAGCCATGT-GTAGGTCTGTCACAGTGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067472 194 - 75711847 TTGAAATCCAAATCCTAAACACCATCACTTCTACTGAGC--CAGCTTTAAAGTAAACATCACAATG------AGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCGGCACTAGCCATGT-GTAGGTCTGTCACAGTGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626686 194 - 18804593 TTGAAATCCAAATCCTAAACACCATCACTTCTACTGAGC--CAGCTTTAAAGTAAACATCACAATG------AGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCGGCACTAGCCATGT-GTAGGTCTGTCACAGTGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238187 198 + 18905526 TTGAAATCCAAATCCTAAACACCATCACTTCTACTGAGC--CAGCTTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCAGCACTAGCCATGT-GTAGGTCTGCCACAGTGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066796 198 - 72318688 TTGATATCCAAATCCTAAACACCATCACTTTTACTGAGC--CAGCTTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCGGCACTAGCCATGT-GTAGGTCTGTCACAGTGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404160 198 - 1517660 TTGAAATCCAAATCCTAAACATCATCACTTCTACTGAGC--CAGCTTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTATTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCGGCAGTAGCCGTGT-GTAGGTCTGTCACAGTGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500772 198 + 6513552 TTGAAATCCAAATCCTAAACACCATCACTTCTACTGAGT--CAGCTTTAAAGTAAATATCACAATGAG--AAAGAATGTCCCTCTTCTGGTGAACTACTCAAGGAACTAGGCATGTGGGCCTGCTTTAGCTCCTGAAG-AAAAC---------AGAAAATGTAAGAGGCTAAGAG----CGGTCAGCACTAGCCATGT-GTAGGTCTGTCACAGTGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269241 198 + 117903854 TTGAAATCCAAATCCTAAACACCATCACTTCCACTGAGC--CAGATTTAAAGTAAACATCACAATGAA--AAAGAATGCCCCTCTTCTAGTGAACTATTCAAGGAACTAGACATGCGGGCATGCTCTACTTCCTGAAG-CAAAC---------AGAAAATGCAAGTGCCTAAGAG----CAGTCAGCACTGGCCATGT-GTAGATCTGTCACAGTGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19457972 198 - 31320352 TTGAAATCCAAATCCTAAACACCATCACTTCCACGGAGC--CAGATTTAAAGTAAATATCACAATGAA--AAAGAATGCTCCTCTTCTAGTGAACTATTCAAGGAACTAGACATGTGGGCATGCTCTACTTCCTGAAG-AAAAC---------AGAAAATGTAAGTGCCTAAGAG----CAGTCAGTACTGGCCATGT-GTAGATCTGTCACAGTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653458 198 + 2203405 TTGAAATCCAAATCCTAAACACCATCACTTCCACTGAGC--CAGATTTAAAGTAAATATCACAATGAA--AAAGAATGCCCCTCTTCTAGTGAACTATTCAAGGAACTAGACATGTGGGCATGCTCTACTTCCTGAAG-AAAAC---------AGGAAATGTAAGTGCCTAAGAG----CAGTCAGCACTGGCCATGT-GTAGATCTGTCACAGTGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605418 198 - 14941987 TTGAAATCCAAATCCTAAACACCATCACTTCCACTGAGC--CAGATTTAAAGTAAATATCACAATGAA--AAAGAATGCCCCTCTTCTGGGGAACTATTCAAGGAACTAGACATGTGGGCATGCTTTACCTCCTGAAG-AAAAC---------AGAAAATGTAAGTGCCTAAAAG----CAGTCAGCATTGGCCATGT-GTAGGACTGTCACAGTGT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262404 198 - 1406956 TTGAAATCCAAATCCCAAACACCTTCACTTCTACTGAGC--CAGATTTAAAGTAAATATCACCATGAGA-AAAAAACGCCCCTCCTCCCATTAACTATTCAAGGAACTGGAGATGTGGGCCTTCCTTAGCTCCTGAAG-AAAAC---------AGAAAAC-TAAGAGCCTAAGAG----TATGTAGGCCCAGCCATAT-GTAGGTATGTTGCAATGT i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112308556 190 - 122678785 ttgaaat---gatactaagcatc-tcattt------acc--cacaatga---taaaaattataatgaaagaaaggaaatttct---------aaatacttga-aaactaaacacacacttctaactaTGCtattaaat-aataattaataatgaaagaataaaaaattCTAAGGGCCTACATTTATTCCCAGCCATGT-CTGAGTCGGCTGTGGTAT i canFam3.chr1 I 469 C 0 s dasNov3.JH575754 489207 150 - 2150887 TTGAAAATTAAACACT----ATGATGACTTCATTTGAGCAGCAAGTTT----CTGATCTCACAATGAG--AAAGAATAT-------------AACTACTTAAGCAAGTAGAAA------------------CATGAAA-AAAGC---------A------------TGCTAAGAG----CACTTTCCCCCAGAAGCACAGTCAATCTGTTGCAGTAT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e otoGar3.GL873546 11230368 2438 - 20685099 I a score=396766.000000 s hg38.chr18_GL383571v1_alt 137141 32 + 198278 GCCCTTCTTAA--AAGCA--TCTGAAACAGAACACT s panTro5.chr18 65047161 32 + 78221452 GCCCTTCTTAA--AAGCA--TCTGAAACAGAACACT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166251 32 + 77229886 GCCCTTCTTAA--AAGCA--TCTGAAACAGAACACT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385728 32 + 17472758 GCCCTTCTTAA--AAGCA--TCTGAAACAGAACACT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426198 32 - 152096393 GCCCTTCTTAA--AAGCA--TCTGAAACAGAACACT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376263 32 + 70235451 ACCCTTGTTAA--AAGCG--TCTGAAACAGAGCACT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067666 32 - 75711847 ACCCTTGTTAA--AAGCA--TCTGAAACAGAGCACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626880 32 - 18804593 ACCCTTGTTAA--AAGCA--TCTAAAACAGAGCACT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238385 32 + 18905526 ACCCTTGTTAA--AAGCA--TCTGAAACAGAGCACT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60066994 32 - 72318688 ACCCTTGTTAA--AAGCA--TCTGAAACAGAGCACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404358 32 - 1517660 ACCCTTGTTAA--AAGCA--TCTGAAACAGAGCACT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3500970 32 + 6513552 ACCCTTGTTAA--AAGCA--TCTGAAACAGAGCACT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269439 32 + 117903854 GCCCTTCTTAA--AAGCA--TCTGAAATGGAGCACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458170 32 - 31320352 GCCCTTCTTAA--AAGCA--TCTGAAATGGAGCACT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653656 32 + 2203405 GCCCTTCTTAA--AAGCA--TCTGAAATGGAGCACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605616 32 - 14941987 GCCGTTCTTAA--AAGGA--TCTGAAATGGAGCACT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262602 32 - 1406956 CCCCCTCTTAA--AAGTA--ACTAAAACGGAGCACC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11232806 32 - 20685099 GCTCTGTTTCA--TAGCA--ACTGAAACAGAGCCCC i otoGar3.GL873546 I 2438 C 0 s canFam3.chr1 112308746 34 - 122678785 ACTCCTCTCAA--AAGCAGGAGTGACAAAGAATACT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 489357 34 - 2150887 ACCCCTCTTAATCAAACG--ACCAAAATAAAGGACt i dasNov3.JH575754 C 0 I 307 e mm10.chr1 111841129 11805 + 195471971 I a score=33348.000000 s hg38.chr18_GL383571v1_alt 137173 3 + 198278 C--AG s panTro5.chr18 65047193 3 + 78221452 C--AG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166283 3 + 77229886 C--AG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385760 5 + 17472758 CAGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426230 3 - 152096393 C--GG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376295 3 + 70235451 C--AG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067698 3 - 75711847 C--AG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626912 3 - 18804593 C--AG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238417 3 + 18905526 C--AG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067026 3 - 72318688 C--AG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404390 3 - 1517660 C--AG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501002 3 + 6513552 C--AG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269471 3 + 117903854 C--AG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458202 3 - 31320352 C--AG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653688 3 + 2203405 C--AG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605648 3 - 14941987 C--AG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262634 3 - 1406956 C--AG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11232838 3 - 20685099 C--CA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112308780 3 - 122678785 C--AG i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 489391 307 - 2150887 I a score=235485.000000 s hg38.chr18_GL383571v1_alt 137176 17 + 198278 AAGTAAACAGGATGTAC s panTro5.chr18 65047196 17 + 78221452 AAGTAAACAGGATGTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166286 17 + 77229886 AAGTAAACAGGATGTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385765 17 + 17472758 AAGTAAACGGGATGTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426233 17 - 152096393 AAGTAAACAGAATGTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376298 17 + 70235451 AAGTAAACAGGATATAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067701 17 - 75711847 AAGTAAACAGGATATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626915 17 - 18804593 AAATAAACAGGATATAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238420 17 + 18905526 AAGTAAACAGGATATAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067029 17 - 72318688 AAGTAAACAGGATATAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404393 17 - 1517660 AAGTAAACAGGATATAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501005 17 + 6513552 AAGTAAACAGGATGTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269474 17 + 117903854 AAGTAAAGAGGATGTAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458205 17 - 31320352 AAGTAAACAGGATGTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653691 17 + 2203405 AAGTAAACAGGATGTAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605651 17 - 14941987 AAGTAAACAGGATGTAC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262637 17 - 1406956 AAGTGAACAAGATGTAC i proCoq1.NW_012148742v1 C 0 I 191 s otoGar3.GL873546 11232841 17 - 20685099 AAGTTAACAGGATGCAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112308783 15 - 122678785 AATTAAAAAGTGTCT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 489698 17 - 2150887 AAGTAAACAAAATATAC i dasNov3.JH575754 I 307 C 0 e mm10.chr1 111841129 11805 + 195471971 I a score=1611705.000000 s hg38.chr18_GL383571v1_alt 137193 144 + 198278 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAG-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC s panTro5.chr18 65047213 144 + 78221452 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAG-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166303 144 + 77229886 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAAAGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAG-------AATATGAA-------ATCGAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385782 141 + 17472758 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGA---TAGAA---TAATTCTATCCAAAACATAT-------AATATGAA-------ATCAAGAATGACAG-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426250 144 - 152096393 TTGAAGAATATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAG-------AATATGAA-------ATGAAGAGTGACAA-TAGCTAATAAC--CTACAT-T--------TTGATATAC---TAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376315 144 + 70235451 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067718 144 - 75711847 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13626932 144 - 18804593 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238437 144 + 18905526 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-TAGCTAATAAC--CTACAC-T--------TTGATATAC---TAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067046 144 - 72318688 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-GAGCTGATAAC--CTACAT-G--------TTGATATAC---TAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404410 144 - 1517660 TTGAAGAGTATTCACTCCCATCATTTTCATGGTCACTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501022 144 + 6513552 TTGAAGAGTATTCACTCCCATAATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAACCTAGGATAGTAGAA---TAATTCTATCCAAAACATAA-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269491 144 + 117903854 CTGAAGAGTACTCACTCCCATCATTTTCATGGTCATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATACAAAATACAG-------AATACAAA-------ATCAAGAATGACAA-CAGCTGATAAC--CTACAT-T--------TTGATACAC---TAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458222 144 - 31320352 TTGAAGAGTACTCACTCCCATCATTTTCATGGTAATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCTATACAAAACACAG-------AATATGAA-------ATCAAAAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653708 144 + 2203405 TTGAAGAGTACTCACTCCCATCATTTCCATGGTAATTGCCATC-A--TCCTAAATGGAAAGCTAGGATAGTAGAA---TAATTCCATACAAAACATAG-------AATATGAA-------ATCAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATAC---TAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605668 145 - 14941987 CTGAGGAGTACTCACTCCCATCATTTTCATGGTAATTGACATC-A--TCCTAAATGGAAAGCTAGGATAATAGAA---TAATTCTATACAAAACATAG-------AATATGAA---------CAAGAATGACAA-TAGCTGATAAC--CTACAT-T--------TTGATATACTGTTAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11232858 133 - 20685099 TTACACCAT-CTCCCTGCCATTGCATTCATAGTCTCTGCCCTCTG--TCCGGGACAAGAATGCTGTCTA-TAGAA-------------CAGAATTTGA-------AGTAGAAA-------ATCAAGAGTGACAC-TGCTTCACAA---ATACACAC--------TTGATACAC---TAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112308798 152 - 122678785 CTTAAGACAATTTACCACCATCACATTCATTGTCATCACCATCTG--GTCTAAGATGAAAGCTAGGACACTAGGTGGTGAATCCTACCCTAAGAACAG-------AATACCAAACAATAAATCAGGAGTTAT-G-TGGTTTACAA---CAATAT-T--------TTT-TATCT---CTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 489715 164 - 2150887 TTGAAGCACACTTGCCACTAACATATGCCTTGCCATCACCACC-AATTTTTAAATGGAAAACCAGGACACAGAGA---GGATCCTGTGCTAAAAACAGGACAGGAAATAGAAA-------ATCAGGAGTGACAAGTGGTTGATAATAACTATAT-TATTCTCTCTTGATATAC---TAC i dasNov3.JH575754 C 0 I 501 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262654 191 - 1406956 I a score=416725.000000 s hg38.chr18_GL383571v1_alt 137337 45 + 198278 ACTTTTTCATTCATAAAACCTTAA-------AAACAAAC--AGAAACAAATGAC s panTro5.chr18 65047357 47 + 78221452 ACTTTTTCATTCATAAAACCTTAA-------AAACAAACATAGAAACAAACGAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166447 47 + 77229886 ACTTTTTCATTCATAAAACCTTAA-------AAACAAACATAGAAACAAACGAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385923 47 + 17472758 ACTTTTTCATTCATAAAACCTTAA-------AAACAAACATAGAAACAAACGAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426394 47 - 152096393 ACTTTTTCATTCATAATACCTTAA-------aaacaaacatagaaacaaacaaC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376459 47 + 70235451 ACTTTTTCATTCATAATACCTTAA-------aaacaaacatagaaacaaacaaC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067862 47 - 75711847 ACTTTTTCATTCATAATACCTTAA-------aaacaaacatagaaacaaacaaC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627076 47 - 18804593 ACTTTTTCATTCATAATACCTTAA-------aaacaaacatagaaacaaacaaC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238581 47 + 18905526 ACTTTTTCATTCATAATACCTTAG-------aaacaaacatagaaacaaacaaC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067190 47 - 72318688 ACTTTTTCATTCATAATACCTTAA-------aaacaaacatagaaacaaacaaC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404554 47 - 1517660 ACTTTTTCCTTCATAATACCTTAA-------aaacaaacatagaaacaaacaaC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501166 47 + 6513552 ACTTTTTCATTCATAATATCTTAA-------aaacaaacatagaaacaaacaaC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269635 43 + 117903854 ACCTTCTCTTTCACAATACTTAAA-------ATAGAAACAAAT----AAACAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458366 47 - 31320352 ATTTTCTCTTTCACAATACTTAAA-------ATACAAACAAATAAACAAACAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653852 43 + 2203405 ATTTTCTCTTTCACAATACTTAAA-------ATACAAACAAAT----AAACAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605813 50 - 14941987 ACTTTCTCTTTCACAATACTTAAAAACAATCATAGAAACAAAT----AAACAAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11232991 47 - 20685099 AATTTCTCATTCTTGATTGTCTTA-------AAACATAGAAACACACAAACAAA i otoGar3.GL873546 C 0 I 11 s canFam3.chr1 112308950 37 - 122678785 ATTTTTTCATTCACAATACCTTAA-------AA----------CAACAGTCAGC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 490380 29 - 2150887 CCTTTTTCATTCACAATACCTTAA-------AAAAA------------------ i dasNov3.JH575754 I 501 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262654 191 - 1406956 I a score=730866.000000 s hg38.chr18_GL383571v1_alt 137382 78 + 198278 AGTGCTTTTTCTAAGTATGGTGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGGGCTAG---------GTCTAGCTATTCTCT s panTro5.chr18 65047404 78 + 78221452 AGTGCTTTTTCTAAGTTTGGTGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGGGCTAG---------GTCTAGCTATTCTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166494 78 + 77229886 AGTGCTTTTTCTAAGTTTGGTGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGGGCTAG---------GTCTAGCTATTCTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5385970 78 + 17472758 AGTGCTTTTTCTAAGTATGGTGTTAAGTGTTTATTT---------TTGACTTTTAGTTTGGCCAGGGGCTAG---------GTCTAGCTATTCTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426441 78 - 152096393 AGTGCTTTTTCTAAGTTTGGCGTTAAGTGCTTATTT---------CTGACTTTTAGTTTGGTCAGGGGCTAG---------GTCTAGCTATTCTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376506 78 + 70235451 AGTGCTTTTTCTAAGTTTGACGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGCGCTAG---------GTCTAGCTATTCTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067909 78 - 75711847 AGTGCTTTTTCTAAGTTTGACGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGCGCTAG---------GTCTAGCTATTCTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627123 78 - 18804593 AGTGCTTTTTCTAAGTTTGACGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGCGCTAG---------GTCTAGCTATTCTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238628 78 + 18905526 AGTGCTTTTTCTAAGTTTGACGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGCGCTAG---------GTCTAGCTATTCTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067237 78 - 72318688 AGTGCTTTTTCTAAGTTTGATGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGTCAGGCGCTAG---------GTCTAGCTATTCTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404601 78 - 1517660 AGTGCTTTTTCTAAGTTTGACGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGCGCTAG---------GTCTAGCTATTCTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501213 78 + 6513552 AGTGCTGTTTCTAAGTTTGATGTTAAGTGCTTATTT---------TTGACTTTTAGTTTGGCCAGGGGCTAG---------GTCTAGCTATTCTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269678 45 + 117903854 AGTGATTTTTCTAAGTTTAGTGTTAAGTGCTTATTT---------TTGACTTT------------------------------------------T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458413 45 - 31320352 AGTGATTTTTCTAAGTTTACTGTTAAGTGCTTATTT---------TTGACTTT------------------------------------------T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653895 45 + 2203405 AATGATTTTTCTAAGTTTAGTGTTAAGTGCTTATTT---------TTGACTTT------------------------------------------T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605863 45 - 14941987 AGTGATTTTTCTAAGTTTAGTGTTAAATGCTTATTT---------TTGACTTT------------------------------------------T i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1262845 78 - 1406956 AGTACTTTTTCTAAGTTTGTTATGAAGTGCTTACTT---------TTGACATTTGGTTTGGTCAGGGACTGG---------GTCGAGCTGTTCTCT i proCoq1.NW_012148742v1 I 191 I 775 s otoGar3.GL873546 11233049 78 - 20685099 TTTTTTTTTTCTAAGTTTGTTCTTAAGTGCTTACTT---------TTGGCTTTTGGTTTGTCCAGGGACTGG---------GTTGAGCTGTTCTCT i otoGar3.GL873546 I 11 C 0 s canFam3.chr1 112308987 86 - 122678785 AGTTCATTTTCAAAGTTTGGTGCTGACTGCTTACTCTGCTTACTATTGACCATTAGAAAGGCTAGAAATTGG---------GGTGGGTT-TTCTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 490409 85 - 2150887 AGTTCCTTTTATAAGATTGATGTTGAGT-CTAATTT---------TTTAATCA-ATTTCTGTGGGTGGCTAGCGAAGACCAATTTAAACATCTTTT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I a score=120154.000000 s hg38.chr18_GL383571v1_alt 137460 9 + 198278 GGCCATGTC s panTro5.chr18 65047482 9 + 78221452 GGCCATGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166572 9 + 77229886 GGCCATGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386048 9 + 17472758 GGCCATGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426519 9 - 152096393 GGCCATGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376584 9 + 70235451 GGCCATGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067987 9 - 75711847 GGCCATGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627201 9 - 18804593 GGCCATGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238706 9 + 18905526 GGCCATGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067315 9 - 72318688 GGCCATGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404679 9 - 1517660 GGCCATGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501291 9 + 6513552 GGCCATGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269723 9 + 117903854 GGCCATGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458458 9 - 31320352 GGCCATGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653940 9 + 2203405 GGCCATGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605908 9 - 14941987 GGCCATGTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233127 9 - 20685099 GCTCTGGTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112309073 9 - 122678785 GGCCATTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 490494 9 - 2150887 GACCATTTC i dasNov3.JH575754 C 0 I 1215 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262923 775 - 1406956 I a score=83828.000000 s hg38.chr18_GL383571v1_alt 137469 6 + 198278 ACTTCT s panTro5.chr18 65047491 6 + 78221452 ACTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166581 6 + 77229886 ACTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386057 6 + 17472758 ACTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426528 6 - 152096393 ACTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376593 6 + 70235451 ACTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63067996 6 - 75711847 ACTTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627210 6 - 18804593 ACTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238715 6 + 18905526 ACTTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067324 6 - 72318688 ACTTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404688 6 - 1517660 ACTTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501300 6 + 6513552 ACTTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269732 6 + 117903854 ACTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458467 6 - 31320352 ACTTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653949 6 + 2203405 ACTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605917 6 - 14941987 ACTTCT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233136 6 - 20685099 ATTTCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112309082 6 - 122678785 ATTTTT i canFam3.chr1 C 0 I 1492 s dasNov3.JH575754 491718 6 - 2150887 ACTGTT i dasNov3.JH575754 I 1215 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262923 775 - 1406956 I a score=62852.000000 s hg38.chr18_GL383571v1_alt 137475 5 + 198278 CCCCT s panTro5.chr18 65047497 5 + 78221452 CCCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166587 5 + 77229886 CCCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386063 5 + 17472758 CCCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426534 5 - 152096393 CCCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376599 5 + 70235451 CCCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068002 5 - 75711847 CCCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627216 5 - 18804593 CCCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238721 5 + 18905526 CCCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067330 5 - 72318688 CCCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404694 5 - 1517660 CCCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501306 5 + 6513552 CCCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269738 5 + 117903854 CCCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458473 5 - 31320352 CCCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653955 5 + 2203405 CCCTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605923 5 - 14941987 CCCCT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233142 5 - 20685099 CTCAT i otoGar3.GL873546 C 0 I 60 s dasNov3.JH575754 491724 5 - 2150887 CCTCC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262923 775 - 1406956 I e canFam3.chr1 112309088 1492 - 122678785 I a score=135151.000000 s hg38.chr18_GL383571v1_alt 137480 13 + 198278 ACTGTCTAAAGCA s panTro5.chr18 65047502 13 + 78221452 ACTGTCTAAAGCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166592 13 + 77229886 ACTGTCTAAAGCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386068 13 + 17472758 ACTGTCTAAAGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426539 13 - 152096393 ACTGTCTAAAGCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376604 13 + 70235451 ACTGTCTAAAGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068007 13 - 75711847 ACTGTCTAAAGCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627221 13 - 18804593 ACTGTCTAAAGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238726 13 + 18905526 ACTGTCTAAAGCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067335 13 - 72318688 ACTGTCTAAAGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404699 13 - 1517660 ACTGTCTAAAGCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501311 13 + 6513552 ACTGTGTAAAGCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269743 13 + 117903854 ACCATCTAAACCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458478 13 - 31320352 ACTGTCTAAACCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653960 13 + 2203405 ACTGTCTAAACCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605928 13 - 14941987 ACTGTCTAAACCA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 491729 13 - 2150887 ACCCTCCAAACGA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262923 775 - 1406956 I e canFam3.chr1 112309088 1492 - 122678785 I e otoGar3.GL873546 11233147 60 - 20685099 I a score=1104636.000000 s hg38.chr18_GL383571v1_alt 137493 105 + 198278 ATAAACAAACAAAAGAAACACAGCTTTACTGTAACCTTAGTTTTAACATAAGTTGGTGC--CTCTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA s panTro5.chr18 65047515 105 + 78221452 ATAAACAAACAAAAGAAACACAGCTTTACTGTAACCTTAGTTTTAACATAAGTTGGTGC--CTCTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166605 105 + 77229886 ATAAACAAACAAAAGAAACACAGCTTTACTGTAACCTTAGTTTTAACATAAGTTGGTGC--CTCTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386081 105 + 17472758 AGAAACAAACAAAAGAAACACAGCTTTACTGTAACCTTAGTTTTAACATAAGTTGGTGC--CTCTTGGTTTAAGACAAGAAATGTTTTGAGGGTTGAGAGAAATGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426552 105 - 152096393 AGAAACAAACAAAAGAAACACAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTCTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376617 105 + 70235451 AGAGACAAATAAAAGAAACACAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTTAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068020 105 - 75711847 AGAGACAAATAAAAGAAACACAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTTAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627234 105 - 18804593 AGAGACAAATAAAAGAAACACAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTTAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238739 105 + 18905526 AGAGACAAATAAAAGAAACACAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067348 105 - 72318688 AGAGACAAATAAAAGAAACATAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404712 105 - 1517660 AGAGACAAATAAAAGAAACACAGCTTTAATGTAACCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTGAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501324 105 + 6513552 AGAGACAAATAAAAGAAACACAACTTTAATTTAATCTTAGTTTTAACATAAGTTGGTGC--CTTTTGGTTTCAGACAAGAAATGTTTTGAGGGTTGAGAAAAATGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269756 101 + 117903854 AGTAACAAAC--CAGAGACATAGCCTTAATGTAACCTTA-TTTTAACTTAAGTTAG-GC--CTCTTGGCTTGAGAGAAGAAATGTTTTGTGGGTTGAGAAAAATGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458491 102 - 31320352 AG-AACGAGCAAAAGAGACATAGCCTTAATGTAATCTTAGTTTTAACTTAAGCTGG-GC--CTCTTGGCTTGAGAGAAG-AATGTTTTGAGGGTTGAGAAAAATGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1653973 104 + 2203405 AGAAACAAACAAAAGAGACATAGCCTTAATGTCACCTTAGTTTTAACTTAAGTTGG-GC--CCCTTGGCTTGAGAGAAGATATGTTTTGTGGGTTGAGAAAAATGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3605941 104 - 14941987 AGAAACAAACAAAAGAGATGTAGCCTTAATGTAGCCTTAGTTTTAACTTAAGTTGG-GC--CTCTTGGCTTGAGAGAAGAAATATTTTGTGGGTTGAGAAAAATGAA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112310580 105 - 122678785 ATCAAGAAATAAAAGAAACACAGTTTTAACACAACCATAGTGTTAGCACAAACTGGTGC--CTATTTGCCTGAAACAAGGAAACTTCTGTGAGTTGAGAGAAGTAAG i canFam3.chr1 I 1492 C 0 s dasNov3.JH575754 491742 92 - 2150887 ---------------AGAAACAATTGTGGCACAACCTTAGTTTTGCCATAAACTGGCGCTATTATTGGCTTGAGAGAAGGGCTCTTTTGTGGGTTGAGAAAAGTAAG i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1262923 775 - 1406956 I e otoGar3.GL873546 11233147 60 - 20685099 I a score=641586.000000 s hg38.chr18_GL383571v1_alt 137598 56 + 198278 TCCTTCACCTATGGCTTGAGATGCCAAGCTGGTCACTGTGATGACCA-CTGATCACT----- s panTro5.chr18 65047620 56 + 78221452 TCCTTCACCTATGGCTTGAGATGCCAAGCTGATCACTGTGATGACCA-CTGATCACT----- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166710 56 + 77229886 TCCTTCACCTATGGCTTGAGATGCCAAGCTGATCACTGTGATGACCA-CTGACCACT----- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386186 56 + 17472758 TCCTTCACCTATGGCTTGAGATGCCAAGCTGGTCACTGTGATGACCA-CTGATCACT----- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426657 56 - 152096393 TCTTTCACCTATGGCTTGTGATGCCAAACTGGTCACTGTGATGATGA-CTGATCACT----- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376722 56 + 70235451 TCTCTCATTTATGGCTTGAGATGCCAAGCTGGTCACTGTAATGACCA-CTGATCACT----- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068125 56 - 75711847 TCTCTCATTTATGGCTTGAGATGCCAAGCTGGTCACTGTAATGACCA-CTGATCACT----- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627339 56 - 18804593 TCTCTCATTTATGGCTTGAGATGCCAAGCTGGTCACTGTAATGACCA-CTGATCACT----- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238844 56 + 18905526 TCTCTCATTTATGGCTTGAGATGCCAAGCTGGTCACTGTAATGACCA-CTGATCACT----- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067453 56 - 72318688 TCTCTCATTTATGGCTTGAGATGCCAAACTGGTCACTGTAATGACCA-CTGATCACT----- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404817 56 - 1517660 TCTCTCATTTATGGCTTGAGATGCCAAGCTGGTCACTGTAATGACCA-CTGATCACT----- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501429 56 + 6513552 TCTCACATTTATGGCTTGAGATGCCAAGCTGGTCACTGTAATGACCA-CTGATCACT----- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269857 56 + 117903854 TCCCTCACCTATGGCTTTAGATGCCCAGCTGGTCTCTGTGATGACCA-CTGATCAAT----- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458593 56 - 31320352 TCCCTCATCTATGGCTTGAGATGCCAGCCTGGTCTCTGTGATGACCA-CTGATCACT----- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654077 56 + 2203405 TCCCTCACCTATGGCTTGAGATGCCAAGCTAGTCTCTGTGATGACCA-CTAATCACT----- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606045 46 - 14941987 TCCCTCATCTATGGCTTGAGATGCCAAGCTGGTCTCTGTGATGAC-----------T----- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1263698 56 - 1406956 TCCCTCACCTATGGCTTGTGATGGCAAGCTGGTCACTGCGGTGGCTA-CTGGTCACT----- i proCoq1.NW_012148742v1 I 775 I 119 s canFam3.chr1 112310685 56 - 122678785 TCTCTCACTTGTGGTTTGGGACAGCAAGCTAGTCACTATGATGACTG-CTGATTTCT----- i canFam3.chr1 C 0 I 4 s dasNov3.JH575754 491834 56 - 2150887 GCTCCTAACTTTGGCCTGGGATATAAAGCTAGTC------AAGACTAGCTGGTCTCTTTACT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e otoGar3.GL873546 11233147 60 - 20685099 I a score=1189650.000000 s hg38.chr18_GL383571v1_alt 137654 124 + 198278 GAAGGAGACCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAAT------CCCCCCCACC----TTTTTTTT-----C-GAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-T-GCCAAAGCAATTTCAG s panTro5.chr18 65047676 124 + 78221452 GAAGGAGACCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAAT------CCCCCCGACC---TTTTTTTTT-----C-GAAAGTTGAATGTAGAGAGGACTTGAAAGTTGG-A--AAGCATGA-T-GCCAAAGCAA-TTCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166766 123 + 77229886 GAAGGAGACCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAAT------CCCCCCGACC----TTTTTTTT-----C-GAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-T-GCCAAAGCAA-TTCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386242 124 + 17472758 GAAGGAGACCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAAT------CCCCCCCACC---TTTTTTTTT-----C-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-T-GCCAAAGCAA-TTCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426713 126 - 152096393 GAAGGAGACCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCCCCACC--TTTTTTTTTT-----C-AAAAGTTGAATGTAGAGAGGCCTTGAAAGCTGG-A--AAGCATGA-T-GCCAAAGCAA-TTCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376778 128 + 70235451 GAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCTCCACCTTTTTTTTTTCT-----C-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068181 128 - 75711847 GAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCTCCAACTTTTTTTTTTCT-----C-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627395 128 - 18804593 GAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCTCCACCTTTTTTTTTTCT-----C-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13238900 129 + 18905526 CAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCTCCACCTTTTTTTTTTTTC----C-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067509 133 - 72318688 GAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCTCCACCTTTTTTTTTTTTTTATCC-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 404873 131 - 1517660 GAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATC-----CCCCTCCACCTTTTTTTTTTTTT--TTC-AAAAGTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501485 128 + 6513552 GAAGGAGCCCAGGCCATTTTTGAAACTGAAGTGACTTTTAACCAATT-----CCCCTCCACCTTTTTTTTTTTT-----C-AAAAGTTGAATGTAGAGGGGTCTTGAAAGTTGG-A--AAGCATGA-C-CTCAAAGCAA-TTCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105269913 134 + 117903854 GAAGGAGCCCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAATCCCATTCCCAGCCACTTTTTTTTTTTCTT----C-AGAATTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CCCAAAGCAA-GTCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458649 133 - 31320352 GAAGGAGCCCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAATTCCATCCCCACCCCCCTTTTTTCCCTCCC----C--GAATTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CCCAAAACAA-GTCTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654133 135 + 2203405 GAAGAAGCCCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAATCCCATTCCCACCCCCCCCCTTTTTTTTTT----CCAGAATTTGAATGTAGAGGGGCCTTGAAAATTGG-A--AAGCATGA-C-CCCAAAACAA-GTCTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606091 129 - 14941987 GAAGGAACCCAGGACATTTTTGAAACTGAAGTGACTTTTAACCAATCCCATACCCACCCCCCTTTTTTTTC----------AGAATTTGAATGTAGAGAGGCCTTGAAAGTTGG-A--AAGCATGA-C-CCCAAAGCAA-GTCTG i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112310745 114 - 122678785 GGAAGGATCCAGGACATTTGTGAAAACGCAGTGACCTAT-ACCAATC-----C-------------TTCTTTCT-----C-AAAACTTGAAAGTAGAGAGACCTTGATATTTGGTT--CAGCATGACC-CCCAAAACTA-CTG-- i canFam3.chr1 I 4 I 2 s dasNov3.JH575754 491890 98 - 2150887 GAAGGAGCCTAGACATTTTTTAAAAGTGAAGTGACCTGTAAC-------------------------------------C-AAAATTTGA------AGAGACCTGGAAAGTTTG-GTTCAGCATGA-CTCCCAAAACAA-TCACG i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1263754 119 - 1406956 I e otoGar3.GL873546 11233147 60 - 20685099 I a score=817910.000000 s hg38.chr18_GL383571v1_alt 137778 63 + 198278 TGTGTAGGAAAGAACAAGAAAACACC-GAAATAAAATTATCTTTAAAG-GAAATTTTAGGCTGGT s panTro5.chr18 65047800 63 + 78221452 TGTGTAGGAAAGAACAAGAAAACACC-GAAATAAAATTATCTTGAAAG-GAAATTTTAGGCTGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166889 63 + 77229886 TGTGTAGGAAAGAACAAGAAAACACC-GAAATAAAATTATCTTGAAAG-GAAATTTTAGGCTGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386366 63 + 17472758 TGTGTAGGAAAGAACAAGAAAACACC-GAAATAAAATTATCTTGAAAG-GAAATTTTAGGCTGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426839 63 - 152096393 TGTGCAGGAAAGAAGAAGAAAACACC-GAAATAAAATTATCTTGAAAG-GAAATTTTAGGCTGGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376906 64 + 70235451 TGTGTAGGAAAGAACAGGAAAATGCCTGAAATAAAATTATCTTGAGAG-GAAATTTGAGGCTGGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068309 64 - 75711847 TGTGTAGGAAAGAACAGGAAAATGCCTGAAATAAAATTATCTTGAGAG-GAAATTTGAGGCTGGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627523 64 - 18804593 TGTGTAGGAAAGAACAGGAAAATGCCTGAAATAAAATTATCTTGAGAG-GAAATTTGAGGCTGGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239029 64 + 18905526 TGTGTAGGAAAGAACAGGAAAATGCCTGAAATAAAATTATCTTGAGAG-GAAATTTGAGGCTGGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067642 64 - 72318688 TGTGTAGGAAAGAACAGGAAAATGCCTGAAATAAAATTATCTTGAGAG-GAAATTTGAGGCTGGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405004 64 - 1517660 TGTGTAGGAAAGAACAGGAAAATGCCTGAAATAAAATTATCTTGAGAG-GAAATTTGAGGCTGGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501613 64 + 6513552 TGTGTAGGAAAGAACAAGAAAACGCCTGAAAAAAAATTATCTTGAGAG-GAAATTTTAGGCTGGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270047 64 + 117903854 TGTGTAGGAAAGAATAAGAAAACACCTGAAATAAAATCATCTTGAGAG-GAAATTTTAGGCTGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458782 64 - 31320352 TGTGTAGGAAAGAACAAGAAAACACCTGAAATAAAATTAACTTGAGAG-GAAATTTTAGGCTGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654268 64 + 2203405 TGTGTAGGAAAGAACAAGAAAACACCTAAAATAAAATTACCTTGAGAG-GAAATTTTAGGCTGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606220 64 - 14941987 TGTGTAGGAAAGAACAAGAAAACACCTGAAATAGAATTACCTTGAGAG-GAAATTTTAGGCTGAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1263873 64 - 1406956 TGTGGAGGAAAGGACAAGAAAACAGCTGAAATAAAATTACCTTGAGAG-GTGATTTTAGGCTGAT i proCoq1.NW_012148742v1 I 119 C 0 s canFam3.chr1 112310861 63 - 122678785 TGAGCAGAAAAGGACAAGAAAATACCAGAAATGAGATTACCTAGAGAG-GGGATTTTAGGCTGG- i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 491988 65 - 2150887 TGTGCAGGAAAGGACAAGAAAGTACCTGAAATAAAATTACCTTGAGGGAGAGATTTTAGGCTGGT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e otoGar3.GL873546 11233147 60 - 20685099 I a score=1605208.000000 s hg38.chr18_GL383571v1_alt 137841 123 + 198278 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCCGTGTAATATATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA s panTro5.chr18 65047863 123 + 78221452 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGTCTGATTTCCGTGTAATATATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64166952 123 + 77229886 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCCGTGTAATATATACCTACTGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386429 122 + 17472758 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCTGTGTAATATATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGA----CCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139426902 123 - 152096393 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTGCGGGATGATGGCTGATTTCTGTGTAATATATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAC---CCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57376970 123 + 70235451 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGACGATGGCTGATTTCTGTGTAATGTATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068373 123 - 75711847 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGACGATGGCTGATTTCTGTGTAATGTATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627587 123 - 18804593 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGACGATGGCTGATTTCTGTGTAATGTATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239093 123 + 18905526 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCTGTGTAATATATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067706 123 - 72318688 AATTTAAGTTCAATAGTAG----TTCCTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCTGTGTAATATATACCTAATGTAGGCAGCTCTTCTAGATTTAGTAACAGTGAT---CCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405068 123 - 1517660 AATTTAAGTTCAATAGAAG----TTCTTAATGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCTGTGTAATATATACCTAATGTAAGCAGCTCTTCTAGATCTAGTAACAGTGAT---CCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501677 123 + 6513552 AATTTAAGTTCAATAGAAG----TTCCTAGTGGTTTTTAAGGGGTTAGGGGTATGGGATGATGGCTGATTTCTGTGTAACATATACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAGTGAT---CTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270111 123 + 117903854 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTTAGGGGTTAAGGGTATGGGAAGATGGCTGATTTCTATGTAATATGTACCTAATGTAGGCAGCTCTTCTAGCTCTAATAACAATGAA---CCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458846 123 - 31320352 AATTTAAGTTCAATAGAAG----TTCCTAATGGTTTTTTAGGGGTTAAGGGTATGGGAAGATGGCTGATTTCTGTGTAATATGTACCTAACGTAGGCAGCTCTTCTAGCTCTACTAACAATGAT---CCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654332 123 + 2203405 AATTTAAGTTCAATAGAAG----TTCCTAATGTTTTTTTAGGAGTTAAGGGTATGGGAAGATGGCTGATTTCTGTGTAATATGTACCTAATGCAGGCAGCTCTTCTAGCTCTACTAACAATGAT---CCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606284 123 - 14941987 AATTTAAGTTCGACAGAAG----TTCCTAATGGTTTTTTAGGGGTTAAGGGTAAGGGAAGATGGCTGATTTCTGTATAATATGTACCTAATGTAGGCAGCTCTTCTAGCTCTAGTAACAATGAT---CCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1263937 121 - 1406956 -AATCAGGCTCAACAGAAG----AGCCTAATGGTTTTTTAGGGGTTAGGAGCGTGAGG-AGTGGTTGATGTCTGCATAATATCTACCTAATGTAGGCAGCTCTTCTAGATCTAGTAACAATGGT---CCA i proCoq1.NW_012148742v1 C 0 I 137 s otoGar3.GL873546 11233207 119 - 20685099 ACTTCGAGCTCAAAAGAAT----AGCCAAATGG-TTTTTaggagttggaggtgtgagg-aatggttgatttctgcacagtatgaaaataccgtaggcagctcttccacatctagtaacagtggt---c-- i otoGar3.GL873546 I 60 C 0 s canFam3.chr1 112310924 108 - 122678785 ---TCAGGCTCCACAGAAGTGCATTTTTTTTTTTTTTTCCGGGGTTGAGAA---------------GGTTTCTGCATAATATGTACCTAATGTAGGCAGCTTTTC-AGACCCAACAGCAGTGGT---CCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 492053 105 - 2150887 AATTAAGGATGGACAGAAG----TGCCTAATGGTTTTTCAGGGA---------------GATGGTTGATTTCTGCATA----GTACCTAAA--AGGCAGCCCTTCTAGACCTAGGAACAGTGATGGCCCA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I a score=1408769.000000 s hg38.chr18_GL383571v1_alt 137964 140 + 198278 CTAGGTTGTCCTTTT--------------AAAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTT---G-GCATGAGCCA-CCAATGTCAACTGCACA-AAATGGTATAAGCGTGCAATTTTGGCCCTCACACACAATTGTCATT s panTro5.chr18 65047986 140 + 78221452 CTAGGTTGTCCTTTT--------------AAAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTT---G-GCATGAGCCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCTCGCACACAATTGTCATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167075 140 + 77229886 CTAGGTTGTCCTTTA--------------AAAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATTAACTGGCCTTTT---G-GCATGAGCCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCTCGCACACAATTGTCATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386551 140 + 17472758 CTAGGTTGTCCTTTT--------------AAAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTT---G-GCATGAGCCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCTCACACACAATTGTCATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427025 139 - 152096393 GTAGGTTGTCCTTTT---------------GAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAAGGAACTGGCCTTTT---G-GCATGAGCCA-CCAATGTCAACTGCACA-AAGTGGTATAAGCATGCAATTTTGGCCCTCACACACAATTGTCATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377093 135 + 70235451 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTT---G-GCAGGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCT--CACACAATTGTCATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068496 135 - 75711847 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTT---G-GCAGGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCT--CACACAATTGTCATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627710 135 - 18804593 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTT---G-GCAGGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCT--CACACAATTGTCATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239216 135 + 18905526 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAGTGAACTGGCCTTTT---G-GCATGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCT--CACACAATTGTCATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067829 137 - 72318688 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAGTGAACTGGGCTTTT---G-GCATGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCCTGCAATTTTGGCCCTCACACACAATTGTCATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405191 135 - 1517660 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAGTGAACTGGCCTTTT---G-GCATGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCT--CACACAATTGTCATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501800 137 + 6513552 GTAGGTTGTCTTTT----------------AAAAAACAACAAACTAAGCAAA-AAGATGAACTAAAATGAACTGGCCTTTC---G-GCATGA-CCA-CCAATGTCAACTGCACA-AAATGGTATAAGCATGCAATTTTGGCCCTCACACACAACTGTCATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270234 139 + 117903854 GTAGGTTGTCCTTTT---------------AAAAAACAACAAACTAAGCAAACAAGGTGAACTAAAATGAACTGGCCTTTT-----GCATGAACCA-CCAATGTCAATTGCACG-AAATGGTATAAGCATGCAATTTTGGCCCTCATACACAATTGTCATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19458969 139 - 31320352 CTAGGTTGTCCTTTT---------------AAAAAACAACAAACTAAGCAAACAAGGTGAACTAAAATGAACTGGCCTTTT-----GCATGTACCA-CCAATGTCAATTGCACG-AAATGGTATAAGCATGCAATTTTGGCCCTCACACACAATTGTCATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654455 139 + 2203405 CTAGGTTGCCCTTTT---------------AAAAAACAGCAAACTAAGCAAACAAGCTGAACTAAAATGAACTGGCCTTTT-----GTATGAACCA-CCAATGTAAATTGCACG-AAATGGTATAAGCATGTAATTTTGGCCCTCACACACAATTGTCATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606407 139 - 14941987 GTAGGTGGTCCTTTT---------------AAAAAACAACAAACTAAGCAAACAAGGTGAACTAAAATGAACTGGCCTTTT-----GCATGAACCA-CCAATGTCAATTGCACG-AAATGGTATAAGCATGCAATTTTGGCCCTCACACACAATTGTCATT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233326 130 - 20685099 ------tgtgcgttt---------------gaaatgagagaagc----cgaa-aaggtgaactaagg-gaaatagcctttcatgg-ttagga--ca-ccaatgtgaactgtacagaaatcacataagcacgtgactcggacctcggcagacaattgccatt i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112311032 146 - 122678785 GTAGGTTGTGCTTTTGAAAATATAATTAAGAAaaaaaaaaaaagaaagaaag-aaagaaagaTAACATGAACTGGCTTTTT---GTGCATGGGTCAGCAAATATGAACTGCACAGAAACAGTAAGCACAT-----------CCCTGTAGACAAGTGTCGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 492158 108 - 2150887 GTGAGTTGTATTTAG---------------AGAGTAAAATGAAGCAAA-AAA-AATGTGAACTAAAATGAACTGG---------G---------CA-----------------G-AAACAGGATAAACACAGAATTCTGGTCTCCCTAGATAAATGTCATT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264058 137 - 1406956 I a score=2673190.000000 s hg38.chr18_GL383571v1_alt 138104 204 + 198278 TGTTTAGGTAAgcagaaccagtcctctatagtgatactttataccagtgagaagcagtgaaagtTTTGGCCACATGGGATTTTAGGTTGTTTTTCATTGTGTGTTTGGAATTAGTCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC-------TTTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTATTTAG----TAGCATGAGGA s panTro5.chr18 65048126 203 + 78221452 TGTTTAGGTAAgcagaaccagtcctctatagtgatactttataccagtgagaagcagtgaaagttttggccacatgggattttaggttgtttttcattttgtgtttggaaTTAGTCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC--------TTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCTATTTATTTAG----TAGCATGAGGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167215 203 + 77229886 TGTTTAGGTAAgcagaaccagtcctctatagtgatactttataccagtgagaagcagtgaaagttttggccacatgggattttaggttgtttttcattttgtgtttggaaTTAGTCCTGAAAACTTTTGATTAAGTTCCAAGAAATT-TTAGAC--------TTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTATTTAG----TAGCATGAGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386691 203 + 17472758 TGTTTAGGTAAgcagaaccagtcctctatagtgatactttataccagtgagaagcagtgaaagttttggccacatgggattttaggttgtttttcattttgtgtttggaaTTAGTCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC--------TTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTATTTAG----TAGCATGAGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427164 204 - 152096393 TGTTTAGGTAtgcagaaccagtcctctatagtgatactttataccagtgagaagcagtgaaagttttggccacatgggattttaggttgtttttcattttgtgtttggaaTTAGTCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC-------TTTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTATTTAG----TAGCATGAGGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377228 203 + 70235451 TGTTTAGGTAAGCAGAACCTGTCCTCTACAGTGATACTTTACACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGGGATTTTAGGCTGTTTTTCATTTTGTGTTTGGAATTCATCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC--------TTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTACGTCA----TAGCATGAGGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068631 203 - 75711847 TGTTTAGGTAAGCAGAACCTGTCCTCTATAGTGATACTTTATACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGGGATTTTAGGCTGTTTTTCATTTTGTGTTTGGAATTCATCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC--------TTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTACGTCA----TAGCATGAGGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13627845 203 - 18804593 TGTTTAGGTAAGCAGAACCTGTCCTCTATAGTGATACTTTATACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGGGATTTTAGGCTGTTTTTCATTTTGTGTTTGGAATTCATCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC--------TTTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTACGTCA----TAGCATGAGGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239351 202 + 18905526 TGTTTAGGTAAGCAGAATCTGTCCTCTATAGTGATACTTTATACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGGGATTTTAGGCTGTTTTTCATTTTGTGTTTGGAATTCATCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC---------TTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTACGTCA----TAGCATGAGGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60067966 202 - 72318688 TGTTTAGGTAAGCAGAACCTGTCCTCTATAGTGATACTTTACACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGAGATTTTAGGCTGTTTTTCATTTTGTGTTTGGAATTAGTCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC---------CTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTACGTCG----TAGCATGAGGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405326 202 - 1517660 TGTTTAGGTAAGCAGAACCTGTCCTCTATAGTGATACTTTATACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGGGATTTTAGGCTGTTTTTCATTTTGTGTTTGGAATTCATCCTGAAAACTTTTGATTAAATTCCAAGAAATT-TTAGAC---------TTTTTTT-----TCCTGTATGTC-TTTCTC-CCCCATTTACGTCA----TAGCATGAGGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3501937 201 + 6513552 TGTTTAGGTAAGCAGAACCTGTCCTCTATAGTGATACTTTATACCAGTGAGAAGCAGTGAAAGTTTTGGCCACATGGGATTTTAGGTTGTTTTTCATTTTGTGTTCGGAATTCATTCTGAAAACTTCTGATTAAATTCCAAGAAATT-TTAGAC----------TTTTTT-----TCCTGTATGTC-TTTCTC-CTCCATTTACCTAG----TAGCATGAGGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270373 203 + 117903854 TGTTTGGGTGAGCAGAAACAGTGCTCTTTAGTGATACTTTATACCAGTCAGAAGCAGGGAAAGTTTTGCCCACATGGGATTTTAGGTCGTTCTTCATTT--TGTTTGGAATTAGTCCTGAAAACTTCTGATTAAATTCCAAGAAATT-TTAGAC------TTTTTTTTTT-----TCCTGTATGTC-TTTTTC-CTCCATTTAGTAAG----TAGTAGGAGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459108 203 - 31320352 TGTTTAGGTGAgcagaaccagtcctctatagtgatactttataccagtgagaagcagtgaaagtTTTGTCCACATGGGATTTTAGGTTGTTCTTCATTT--TGTTTGGAATTCGTCCTGAAAACTTCTGATTAAATTCCAAGAAATT-TTAGAC------TTTTTTTTTT-----TCCTGTATGTC-TTTTTC-TTCCATTTAGTAAG----TAGTAGGAGGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654594 208 + 2203405 TGTTTAGGTGAGCAGAACCAGTCCTCTATAGTGATACTTTATACCAGTGAGAAGTAGTGAAAGTTTTGCCCACATGGGATTTCAGGTCGTTCTTCATTT--TGTTTGGAATTAGTCCTGAAAACTTCTGATTAAACTCCAAGAAATT-TTAGAC------TTTTTTTTTTTTCTCTCCTGTATGTG-TTTTTC-CTCCATTTAGTAAG----TAGTAGGAGGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606546 202 - 14941987 TGTTTAGGTGAGCAGAACCAGTCCTCTATCATGATACTTTATACCAGTGAGAAGCAGTGAAAGCTTTGCCCACATGGGATTTTAGGTCGTTCTTCATTT--TGTTTGGAATTAGTCCTGAAAACTTCTGATTAAATTCCAATAAATT-TTAGAC------GTTTTTTTT------TCCTGTATGTC-TTTTTC-CTCCATTTAGTAAG----TAGTAGGAGGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1264195 201 - 1406956 TGTTTAGTTGAGCAGAACCAGTCCTCTATAGTGATACTTTATACCAG-GAGAAGCAGTG--CGTTTTCTTCACGTGGGATTATGGGTCTTTCTTCATTTTATGTTTGGAAGTAGTCCTGAAAACTTTTGATTAAATTCCAAGGAATT-TCAGAC-------TTTGTTTTT-----TCCTGTATTTC-TTTTCC-GTCCAGTTATTCAG----TAGCAGGAGGA i proCoq1.NW_012148742v1 I 137 I 105 s otoGar3.GL873546 11233456 192 - 20685099 tgtttagttgagcagaaccagtcctccatagcgatactttataccagtgagaagcaggc--agttt--------ggagatttcaagtctttcttcattctgtgtttggaagAGGTCCTGAAAAC-ATTGGTTAACTTCCAAGGAATT-TCAGAC-------TTTGTTTTT-----TCC-GTATTTC-TTTTCC-CTCCATTTATTTAG----TGGTGGGAGAA i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112311178 205 - 122678785 TGTTGAGCTGAGCAGGACCAGTCATCTACAATGACACTTTATACTGGTGAGAAGCAGGGAAAGTTTTGGCCACATGGGATTATACCTCTTTCTTCATTTTATGCTTGGAAGTAGTCCTGAAACCTTTTGATTAAATCCCAAGGAACTATAAGAC--------TTTTTTTT-----TCTTGTATTTCTTTTTTC-CCCCATTTATTTAG----TAGTGGGAGGA i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 492266 201 - 2150887 TGTGGAGTTG-GCAGGACCAGGTGCCTATGGAGACACTTTATACTAGTGAGAAGTAGTAGAA-------------GGGATTATAGTTCTTTCTTCATTTAATGCCTGGAAGTAGTTCTGAAACCTTTCAATTAAACCCCCAGAGATT-T-AGACtttttctttttttttc-----ttttgtatttc-tttttctcttcatttatttAGCCATTGGGGTGGGAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I a score=385958.000000 s hg38.chr18_GL383571v1_alt 138308 36 + 198278 --AGACCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA s panTro5.chr18 65048329 36 + 78221452 --AGACCTTAAGT-AGAAAT--------------------AATCATAAAATGGAAGATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167418 36 + 77229886 --AGACCTTAAGT-AGAAAT--------------------AATCATAAAATGGAAGATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386894 36 + 17472758 --AGACCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427368 36 - 152096393 --AGACCTTAAGT-AGAAAC--------------------AATTATAAAATGGAAGATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377431 36 + 70235451 --AGAGCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068834 36 - 75711847 --AGACTTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628048 36 - 18804593 --AGACCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239553 36 + 18905526 --AGACCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068168 36 - 72318688 --AGACCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405528 36 - 1517660 --AGACCTTAAGT-AGAAAT--------------------AATTATAAAATGGAAGATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502138 36 + 6513552 --AGACCTTAAGT-AGAAAT--------------------AATCATAAAATGGAAGACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270576 36 + 117903854 --AGACATTAAGT-AGAAAT--------------------AATTATAAAATGGAAGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459311 36 - 31320352 --AGACATTAAGT-AGAAAT--------------------AATTATAAAGTGGCAGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654802 36 + 2203405 --AGACATTAAGT-AGAAAT--------------------AATTATAAAATGGAAGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606748 36 - 14941987 --AGACATTAAGT-AGAAAT--------------------AATTAAAAAATGGAAGAAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233649 56 - 20685099 --AGACTTCAGAG-AGAAACACTCTGGAGTTTAAGGTACAAGTTTTAAAAGAGAAGAAA i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112311384 35 - 122678785 --AGGCCCTAAGG-GGAAAT--------------------AATT-CAAAGTTTAAGATA i canFam3.chr1 I 1 I 543 s dasNov3.JH575754 492467 49 - 2150887 ATAGAATTCAAGTAAGAAATAAAACGGCATTTTAGATCTGAATTATAAA---------- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264396 105 - 1406956 I a score=497269.000000 s hg38.chr18_GL383571v1_alt 138344 44 + 198278 AGTAACAGCACGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- s panTro5.chr18 65048365 44 + 78221452 AGTAACAGCACGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167454 44 + 77229886 AGTAACAGCACGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386930 44 + 17472758 AGTAACAGCACGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427404 44 - 152096393 AGTAACAGCATGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377467 44 + 70235451 AGTAACAGTACACATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068870 44 - 75711847 AGTAACAGTACACATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628084 44 - 18804593 AGTAACAGTACACATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239589 44 + 18905526 AGTAACAGTACACATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068204 45 - 72318688 AGTAACAGTACGCATACCT-GAACTGGGTAAAACAGATTGTTT--TAA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405564 44 - 1517660 AGTAACAGTACACATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502174 44 + 6513552 AGTAACAGTATGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270612 44 + 117903854 AGTAACAGTACACATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459347 44 - 31320352 AGTAACAGTATGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654838 44 + 2203405 AGTAAGAGTACGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606784 44 - 14941987 AGTAACAGTACGCATACCT-GAACT-GGTAAAACAGATTGTTT--TAA- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233705 44 - 20685099 AGTAATACTGCTTTTACTT-GATTT-GGTAAA--AGCTTATTTGCCAA- i otoGar3.GL873546 C 0 I 2 s dasNov3.JH575754 492516 46 - 2150887 AGTAACAGAATTTGTACTTAAAATT-GGCAAAAAAGATCTTTT--TTTT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264396 105 - 1406956 I e canFam3.chr1 112311419 543 - 122678785 I a score=374956.000000 s hg38.chr18_GL383571v1_alt 138388 33 + 198278 ACATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA s panTro5.chr18 65048409 33 + 78221452 ACATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167498 33 + 77229886 ACATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5386974 33 + 17472758 ACACATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427448 33 - 152096393 ACATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377511 33 + 70235451 ATATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068914 33 - 75711847 ATATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628128 33 - 18804593 ATATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239633 33 + 18905526 ATATATTTTATCACTTT----------GA---TTTCTCTATTTTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068249 33 - 72318688 ATATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405608 33 - 1517660 ATATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502218 33 + 6513552 ATATATTTTATCACTTT----------GA---TTTCTCTCTTTTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270656 31 + 117903854 ACATATTTTATCACTTC----------GA---TTTCTC--TTCTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459391 31 - 31320352 ACATATTTTATCACTTT----------GA---TTTCTC--TTTGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654882 30 + 2203405 ACATATTTTATCACTTT----------GA---TTTCTC--TTT-TA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606828 31 - 14941987 ACATATTTTATCATTTT----------GA---TTTCTC--TTTTTA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1264501 33 - 1406956 ACATGTTTTATCACTTT----------GA---CTTCTCTCTTTTTA i proCoq1.NW_012148742v1 I 105 I 50 s otoGar3.GL873546 11233751 43 - 20685099 ATAGGTTTTATCTTTTTTAAAAAGTTGGA---ATATTCTCATTCTA i otoGar3.GL873546 I 2 C 0 s dasNov3.JH575754 492562 36 - 2150887 TTATGTTTTATCACTTT----------CAATTTTTCCCTCTGTTTC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e canFam3.chr1 112311419 543 - 122678785 I a score=223585.000000 s hg38.chr18_GL383571v1_alt 138421 27 + 198278 GGTTGAAAATT---TTTTTTACTTAAAGAT s panTro5.chr18 65048442 27 + 78221452 GGTTGAAAATT---TTTTTTACTTAAAGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167531 27 + 77229886 GGTTGAAAATT---TTTTTTACTTAAAGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387007 27 + 17472758 GGTTGAAAATT---TTTTTTACTTAAAGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427481 30 - 152096393 GGTTGAAAATTTTCTTTTTTACTTAAAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377544 30 + 70235451 GGTTGAAAAGTATCTTTTTTACTTAAAGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068947 30 - 75711847 GGTTGAAAAGTATCTTTTTTACTTAAAGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628161 30 - 18804593 GGTTGAAAAGTATCTTTTTTACTTAAAGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239666 30 + 18905526 GGTTGAAAAGTATCTTTTTTACTTAAAGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068282 30 - 72318688 GGTTGAAAAGTATCTTTTTTATTTAAAGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405641 30 - 1517660 GGTTGAAAAGTATCTTTTTTACTTAAAGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502251 30 + 6513552 GGTTGAAAAGTATCTTTTTTACTTAAAGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270687 25 + 117903854 AGTCGAAAATTTTCTC-----TTTAAAGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459422 24 - 31320352 AGttaaaaattttct------tttaaagat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654912 30 + 2203405 AGTTGAAAATTTTCTCTTTTACTTAAAGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606859 30 - 14941987 AGTTGAAAATTTTCTCTTTTACTTAAAGAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11233794 16 - 20685099 -------------ATCTCTCACTT-AAGAT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 492598 24 - 2150887 AGTTGGAAGATTTGTTTTTTA---AAA--- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e canFam3.chr1 112311419 543 - 122678785 I a score=54084.000000 s hg38.chr18_GL383571v1_alt 138448 11 + 198278 TTATAAACCCt s panTro5.chr18 65048469 11 + 78221452 TTATAAACCCt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167558 11 + 77229886 TTATAAACCCt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387034 11 + 17472758 TTATAAACCCt i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57377574 11 + 70235451 ATATAAACCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068977 11 - 75711847 ATATAAACCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628191 11 - 18804593 ATATAAACCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239696 11 + 18905526 ATATAAACCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068312 11 - 72318688 ATATAAACCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405671 11 - 1517660 ATATAAACCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502281 11 + 6513552 ATATAAACCTT i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11233810 11 - 20685099 TTATAAACCTT i otoGar3.GL873546 C 0 I 254 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492622 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e nomLeu3.chr4 139427511 0 - 152096393 C a score=14005.000000 s hg38.chr18_GL383571v1_alt 138459 4 + 198278 tttc s panTro5.chr18 65048480 4 + 78221452 tttc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167569 4 + 77229886 tttc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387045 2 + 17472758 tt-- i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57377585 4 + 70235451 TTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63068988 4 - 75711847 TTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628202 4 - 18804593 TTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239707 4 + 18905526 TTTC i cerAty1.NW_012001075v1 C 0 I 52 s chlSab2.chr18 60068323 4 - 72318688 TTTC i chlSab2.chr18 C 0 I 23 s manLeu1.NW_012106698v1 405682 4 - 1517660 TTTC i manLeu1.NW_012106698v1 C 0 I 52 s colAng1.NW_012115433v1 3502292 4 + 6513552 TTTC i colAng1.NW_012115433v1 C 0 I 52 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492622 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e otoGar3.GL873546 11233821 254 - 20685099 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e nomLeu3.chr4 139427511 0 - 152096393 C a score=2548.000000 s hg38.chr18_GL383571v1_alt 138463 1 + 198278 t s panTro5.chr18 65048484 1 + 78221452 t i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167573 1 + 77229886 t i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387047 1 + 17472758 t i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57377589 1 + 70235451 T i rheMac8.chr18 C 0 I 51 s macFas5.chr18 63068992 1 - 75711847 T i macFas5.chr18 C 0 I 17 s macNem1.NW_012016688v1 13628206 1 - 18804593 T i macNem1.NW_012016688v1 C 0 I 52 s chlSab2.chr18 60068350 1 - 72318688 t i chlSab2.chr18 I 23 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492622 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e otoGar3.GL873546 11233821 254 - 20685099 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e colAng1.NW_012115433v1 3502296 52 + 6513552 I e manLeu1.NW_012106698v1 405686 52 - 1517660 I e cerAty1.NW_012001075v1 13239711 52 + 18905526 I e nomLeu3.chr4 139427511 0 - 152096393 C a score=28853.000000 s hg38.chr18_GL383571v1_alt 138464 34 + 198278 ttt--------tgtttgtttgtttgagatggagtttcactct s panTro5.chr18 65048485 42 + 78221452 ttttgtttgtctgtttgtttgtttgagatggagtttcactct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167574 42 + 77229886 ttttgtttgtctgtttgtttgtttgagatggagtttcactct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387048 42 + 17472758 ttttgtttgtttgtttgtttgtttgagatggagtttcactct i gorGor5.CYUI01014964v1 C 0 C 0 s macFas5.chr18 63069010 34 - 75711847 TCt--------tttttttttttttcaggcggagtctccctcc i macFas5.chr18 I 17 C 0 s chlSab2.chr18 60068351 33 - 72318688 ttt--------ttttttttttttttaggcggagtctccctc- i chlSab2.chr18 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492622 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e otoGar3.GL873546 11233821 254 - 20685099 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e colAng1.NW_012115433v1 3502296 52 + 6513552 I e manLeu1.NW_012106698v1 405686 52 - 1517660 I e cerAty1.NW_012001075v1 13239711 52 + 18905526 I e macNem1.NW_012016688v1 13628207 52 - 18804593 I e rheMac8.chr18 57377590 51 + 70235451 I e nomLeu3.chr4 139427511 0 - 152096393 C a score=745.000000 s hg38.chr18_GL383571v1_alt 138498 1 + 198278 t s panTro5.chr18 65048527 1 + 78221452 t i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167616 1 + 77229886 t i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387090 1 + 17472758 t i gorGor5.CYUI01014964v1 C 0 C 0 s cerAty1.NW_012001075v1 13239763 1 + 18905526 c i cerAty1.NW_012001075v1 I 52 C 0 s chlSab2.chr18 60068384 1 - 72318688 c i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405738 1 - 1517660 c i manLeu1.NW_012106698v1 I 52 C 0 s colAng1.NW_012115433v1 3502348 1 + 6513552 t i colAng1.NW_012115433v1 I 52 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492622 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e otoGar3.GL873546 11233821 254 - 20685099 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e macNem1.NW_012016688v1 13628207 52 - 18804593 I e macFas5.chr18 63069044 0 - 75711847 C e rheMac8.chr18 57377590 51 + 70235451 I e nomLeu3.chr4 139427511 0 - 152096393 C a score=398086.000000 s hg38.chr18_GL383571v1_alt 138499 104 + 198278 gttgcagaggctggagtgcagttgcacaatctcggctcacagcaacctccacctcc-cgggttcaagtgat--------tctcttgcctcagcctcccgagtagctggcatta s panTro5.chr18 65048528 104 + 78221452 gttgcccaggctggagtgcagttgcacaatctcggctcacagcaacctccacctcc-cgggttcaagcgat--------tctcttgcctcagcctcctgagtagctggcatta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167617 104 + 77229886 gttgcccaggctggagtgcagttgcacaatctcggctcacagcaacctccacctcc-cgggttcaagcgat--------tctcttgcctcagcctcctgagtagctggcatta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387091 104 + 17472758 gttgcccaggctggagtgcagttgcacaatctcggctcacagcaacctccacctcc-caggttcaagtgat--------tctcttgcctcagtctcccaagtagctggcatta i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57377641 104 + 70235451 gtcgcccaggctagagtgcagtggctcgatctcggctcactgcaagctctgccttc-agggttcacgccat--------tctcctgcctcagcctccccagtagctgggactt i rheMac8.chr18 I 51 C 0 s macFas5.chr18 63069044 104 - 75711847 gtcgcccaggctagagtgcagtggctcgatctcggctcactgcaagctctgccttc-agggttcacgccat--------tctcctgcctcagcctccccagtagctgggactt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628259 104 - 18804593 gtcgcccaggctagagtgcagtggctcgatctcggctcactgcaagctctgccttc-agggttcacgccat--------tctcctgcctcagcctccccagtagctgggactt i macNem1.NW_012016688v1 I 52 C 0 s cerAty1.NW_012001075v1 13239764 104 + 18905526 gtcgcccaggctggagtgcagtggctcgatctcggctcactgcaagctctgccttc-agggttcacgccat--------tctcctgcctcagcctccccagtagctgggactt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068385 105 - 72318688 gtcgcccaggctggagtgcagtggctctatctcgggtcactgcaagctccgccttcaagggttcacgccat--------tctcctgcctcagcttccccagtagctgggactt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405739 104 - 1517660 gtcgcccaggctggagtgcagtggctcgatctcggctcactgcaggctctgccttc-agggttcacgccat--------tctcctgcctcagcctccccagtagctgggactt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502349 112 + 6513552 gtcacccaggctggagtgcagtggctcgatctcggctcactgcaagctccgccttc-agggttcacgccatactcctgctctcctgcctcagcctcccaagtagctgggactt i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 492622 32 - 2150887 ----------------TACAGATGTGTAAAATTGTTTTGC--------CTACATTA--------------------------------------------------------- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e canFam3.chr1 112311419 543 - 122678785 I e otoGar3.GL873546 11233821 254 - 20685099 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e nomLeu3.chr4 139427511 0 - 152096393 C a score=611513.000000 s hg38.chr18_GL383571v1_alt 138603 154 + 198278 caggcgtccgccaccacgcccagataa-ttttttatatttttagtagagac--ggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccgcc-tggcctcccaaagtgctgggattacaggcatgggccaccgtgcct s panTro5.chr18 65048632 154 + 78221452 caggcatccgccaccacgcccagataa-ttttttatatttttagtagagac--ggtttcaccatgttggccaggctggtctcgaacccctgacctcaagtgatccacccgcc-tggcctcccaaagtgctgggatcacaggcatgggccaccgtgcct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167721 154 + 77229886 caggcgtcccccaccacgcccagataa-ttttttatatttttagtagagac--ggtttcaccatgttggccaggctggtctcgaacccctgacctcaggtgatccacccgcc-tggcctcccaaagtgctgggatcacaggcatgggccaccgtgcct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387195 154 + 17472758 caggcatccaccaccatgcccagataa-ttttttgtatttttagtagagac--ggtttcaccatgttggccagcctggtctcgaactcctgacctcaggtgatccacccgcc-tggcctcccaaagtgctgggatcacaggcatgggccaccgtgcct i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57377745 156 + 70235451 taggctcccgccaccaagtgtggccaatttttttttatttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcgccc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069148 156 - 75711847 taggctcccgccaccaagtgtggccaatttttttttatttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcgccc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628363 156 - 18804593 taggctaccgccatcaagtgtggccaatttttttttatttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcgccc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13239868 147 + 18905526 taggctcccgccaccaagtgcggccaatttttttttatttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatccgccca---------cccaaagtgctgggattacaggtgtgagccactgtgccc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068490 155 - 72318688 taggctcccaccaccaagtgcggccaa-ttttttttatttttagtagagatagggtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcactc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405843 156 - 1517660 taggctcccgccaccaagtgtggccaatttttttttatttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcgccc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502461 156 + 6513552 caggctcccgccaccacgtgtggctaatttttttttattttcagtaaagacggggtgtcagcatgttagccaggatggtctcgatttcctgacctc--gtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgccc i colAng1.NW_012115433v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492654 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e otoGar3.GL873546 11233821 254 - 20685099 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e nomLeu3.chr4 139427511 0 - 152096393 C a score=18161.000000 s hg38.chr18_GL383571v1_alt 138757 4 + 198278 ggcc s panTro5.chr18 65048786 4 + 78221452 ggcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167875 4 + 77229886 ggcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387349 4 + 17472758 ggcc i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57377901 4 + 70235451 agcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069304 4 - 75711847 agcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628519 4 - 18804593 agcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13240015 4 + 18905526 agcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068645 4 - 72318688 agcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 405999 4 - 1517660 agcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502617 4 + 6513552 agcc i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11234075 4 - 20685099 aGAT i otoGar3.GL873546 I 254 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e calJac3.chr13 105270712 0 + 117903854 C e dasNov3.JH575754 492654 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e aotNan1.NW_018502140v1 3606889 0 - 14941987 C e cebCap1.NW_016107689v1 1654942 0 + 2203405 C e saiBol1.JH378121 19459446 0 - 31320352 C e nomLeu3.chr4 139427511 0 - 152096393 C a score=8190.000000 s hg38.chr18_GL383571v1_alt 138761 2 + 198278 TT s panTro5.chr18 65048790 2 + 78221452 TT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167879 2 + 77229886 TT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387353 2 + 17472758 TT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427511 2 - 152096393 TT i nomLeu3.chr4 C 0 C 0 s calJac3.chr13 105270712 2 + 117903854 TT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459446 2 - 31320352 tt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654942 2 + 2203405 TT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606889 2 - 14941987 TT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11234079 2 - 20685099 TT i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e dasNov3.JH575754 492654 0 - 2150887 C e canFam3.chr1 112311419 543 - 122678785 I e colAng1.NW_012115433v1 3502621 0 + 6513552 C e manLeu1.NW_012106698v1 406003 0 - 1517660 C e chlSab2.chr18 60068649 0 - 72318688 C e cerAty1.NW_012001075v1 13240019 0 + 18905526 C e macNem1.NW_012016688v1 13628523 0 - 18804593 C e macFas5.chr18 63069308 0 - 75711847 C e rheMac8.chr18 57377905 0 + 70235451 C a score=30207.000000 s hg38.chr18_GL383571v1_alt 138763 8 + 198278 ATAAACCC s panTro5.chr18 65048792 8 + 78221452 ATAAACCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167881 8 + 77229886 ATAAACCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387355 8 + 17472758 ATAAACCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427513 8 - 152096393 ATAAACCC i nomLeu3.chr4 C 0 C 0 s calJac3.chr13 105270714 8 + 117903854 ATAAACCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459448 8 - 31320352 ataaacct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654944 8 + 2203405 ATAAAACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606891 8 - 14941987 ATAAACCT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11234081 8 - 20685099 ATAAACCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112311962 8 - 122678785 ACAAGTCT i canFam3.chr1 I 543 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1264534 50 - 1406956 I e dasNov3.JH575754 492654 0 - 2150887 C e colAng1.NW_012115433v1 3502621 0 + 6513552 C e manLeu1.NW_012106698v1 406003 0 - 1517660 C e chlSab2.chr18 60068649 0 - 72318688 C e cerAty1.NW_012001075v1 13240019 0 + 18905526 C e macNem1.NW_012016688v1 13628523 0 - 18804593 C e macFas5.chr18 63069308 0 - 75711847 C e rheMac8.chr18 57377905 0 + 70235451 C a score=50836.000000 s hg38.chr18_GL383571v1_alt 138771 13 + 198278 TTTTCTATATTAA s panTro5.chr18 65048800 13 + 78221452 TTTTCTATATTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167889 13 + 77229886 TTTTCTATATTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387363 13 + 17472758 TTTTCTATATTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427521 13 - 152096393 TTTTCTATATTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377905 2 + 70235451 -----------GA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069308 2 - 75711847 -----------GA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628523 2 - 18804593 -----------GA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13240019 2 + 18905526 -----------AA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068649 2 - 72318688 -----------AA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 406003 2 - 1517660 -----------AA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502621 2 + 6513552 -----------AA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270722 13 + 117903854 TTTTCTATATTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459456 13 - 31320352 ttttgtatattaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654952 13 + 2203405 TTTTCTATATTAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606899 13 - 14941987 TTTTCTACATTAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1264584 13 - 1406956 TTTTCTACATTGA i proCoq1.NW_012148742v1 I 50 C 0 s otoGar3.GL873546 11234089 13 - 20685099 TTTTCTACATTGG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112311970 13 - 122678785 TTTTCTACATGAA i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 492654 0 - 2150887 C a score=1934691.000000 s hg38.chr18_GL383571v1_alt 138784 185 + 198278 AAATATTAAATCTTCACCAGTTTATAGTACAATTGTGTTTTCTAATTTGGTGCTCTTTTTT-AATGCCGTTACTATTATTGTTTTTGTTT-TTTGGATAC-AGAGAAGATATAAAAAT-ATGTATGTTAACATTTCAATATTTTCTTATGCGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC s panTro5.chr18 65048813 185 + 78221452 AAATATTAAATCTTTACCAGTTTATGGTACAATTGTGTTTTCTAATTTGGTGCTCTTTTTT-AATGCCGTTACTATTATTGTTTTTGTTT-TTTGGATAC-AGAGAAGATATAAAAAT-ATGTACGTAAACATTTCAATATTTTCTTATGCGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64167902 154 + 77229886 AAATATTAAATCATTACCAGTTTATGGTACAATTGT--------------------------------GTTACTATTATTGTTTTTGTTT-TTTGGATAC-AGAGAAGATATAAAAAT-ATGTACGTAAACATTTCAATATTTTCTTATGCGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387376 185 + 17472758 AAATATTAAATCTTTACCAGTTTATAGTACAATTGTGTTTTCTAATTTGGTGCTCTTTTTT-AATGCCGTTACTGTTATTGTTTTTGTTT-TTTGGATAC-AGAGAAGATATAAAAAT-ATGTATGTAAACATTTCAATATTTTCTTATGTGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427534 185 - 152096393 AAATATTAAATCTTTACCAGTTTATAGTACAGTCGTGTTTTCTAATTTGGTGCTCTTTTTT-AATGCCGTTACTATTATTGTTTTTGTTT-TTTGGATAT-AGAGAAGATATAAAAAT-ATGTATGTAAACATTTCAATATTTTCTTACGTGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTTCTACC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57377907 186 + 70235451 AAATATTAAATCTTTACCAGTTTATGGTACAATCGTGTTTTCTAATTTGGTGCTCTTTTTTTAATGTCATTACTATTATTGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAGAAAT-ATGTATATAAACATTTCAATATTTTCTTACATGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069310 186 - 75711847 AAATATTAAATCTTTACCAGTTTATGGTACAATCGTGTTTTCTAATTTGGTGCTCTTTTTTTAATGTCATTACTATTATTGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAGAAAT-ATGTATATAAACATTTCAATATTTTCTTACATGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCTTACC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628525 186 - 18804593 AAATATTAAATCTTTACCAGTTTATGGTACAATCGTGTTTTCTAATTTGGTGCTCTTTTTTTAATGTCATTACTATTACTGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAAAAAT-ATGTATATAAACATTTCAATATTTTCTTACATGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13240021 186 + 18905526 AAATATTAAATCTTTACCAGTTTATAGTACAATCGTGTTTTCTAATTTGGTGCTCTTTTTTAAATGTCATTACTATTATTGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAAAAAT-ATGTATATAAACATTTCAATATTTTCTTACATGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068651 186 - 72318688 AAATATTAAATCTTTACCAGTTTATGGTACAATCGTGTTTTCTAATTTGGTGCTCTTTTTTTAATGTCATTACTATTATTGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAAAAAT-ATGTATATAAACATTTCAATATTTTCTTACATGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 406005 186 - 1517660 AAATATTAAATCTTTACCAGTTTATGGTACAATCGTGTTTTCTAATTTGGTGCTCTTTTTTTAACGTCATTACTATTATTGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAAAAAT-ATGTATATAAACATTTCAATATTTTCTTACATGGTTCCTGGCTTTGGTCTAATGATTAGTTAGTCCTACC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502623 184 + 6513552 AAATATTAAATCTTTATCATTTTATGGTACAATC--GTTTTCTAATTTGGTGCTCTTTTTTTAATGTCATTACTGTTATAGTTTTTGTTT-TTCGGATAT-AGGGAAGACATAAAAAT-ATGTATATAAACATTTCAACATTTTCTTACGTGGTTCCTGGCTTTGGTATAACGATTAGTTAGACCTACC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270735 164 + 117903854 AAATATTAAGTGCTTACCAGTTTATAGTACAATCATGTTTTCTAATTTGGTGCTCTTTTT---------TTAG---------TGCTGTTT-TTTGGATAT-AGAGAAGATATAAAAAT-ATGTATGTAAACATTTCAATAGTTTTTTACACGGTTCCTGCCTTTTGTCTAATGA----TTAGTCCTACC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459469 173 - 31320352 aaatattaaatGTTTACCAGTTTATAGTATAATCATGTTTTCTAATTTGATGCTCTTTTTT-AGT--TGTTAC---------TGTTGTTT-TTTGGATAT-AGAGAAGATATAAAAAT-ACGTATGTAAACATTTCAATA-TTTTTTACATGGTTCCTGGCTTTTGTCTAATGACTAGTTAGTCCTACC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1654965 176 + 2203405 AAATATTAAATGTTTACCAGTTTATAGTACAATCATGTTTTCTAATTTGGTGCTCTTTTTT-AGTGCTGTTAG--------TTATTGTTT-TTTGTATAT-AGAGAAGATATAAAAAT-ATGTATGTAAACATTTCAATATTTTTTTACACGGTTCCTGGC-TTTGTCTAATGATTAGTTAGTTCTACC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3606912 179 - 14941987 AAATATTAAATGTTTACCAGTTTATAGTACAATCATGTTTTCTAATTTGGTACTCTTTTTT-AGTGCTGTTACT------GTTATTGTTT-TTTGGATAT-AGAGAAGATATAAAAAT-ATGTATGTAAACATTTCAATATTTTTTTACACAGTTCCTGGCTTTTGTCTAATGATTAGTTAGTCCTACC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1264597 179 - 1406956 AGATATTAAATCTTTACATGTTTATAGTAAAATAATGTTTTCTAATTTGGTGCTCTTTTAA-AATGCCATT-TTGTTATTGTTTGTG-TT-TTTGGACAT-AAAGAAGATTTAAAAAT-ATG----TAAATTTTTCAATCGTCTCTTATATGGTTCCTGGCTTTGGCATAAAGCTTAGTTATTTCTGTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11234102 98 - 20685099 -----------------------------------------------------------------------------------------T-TCGGGACATAAAAAAAGATTTAAAAAT-ACGTCAATAACTTTTAAAATCTTTTCCTACGTGGTTCCTGGCTTTAGGATAAAGATTTGTTGTTCCTATC i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112311983 120 - 122678785 AGAATTTAAATCTTTACTTGCTTCTAGTGAAATCATGTTT-----------------------------------------------------------------GAGATTTAAAAAT-ATTCCTGCAGATCTCT---TGGTCTTTTATCTGCTTTTTGTCTTTGATATCATGATTAGTTAGTCCTGCC i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 492654 187 - 2150887 AGCTATTAAGTCTTTACCTGTTTATAGTTAAATTATTTTTTCAAATTTGGTGCTCTTCTTT-AAGGCTGTTATTGCTTTTGTTTTGCTCTGTTTGGATGT-AGAGAATATTAAAAAATCATATATGCAAATCTTTCAACCTTTTCTTCTGTGTTTCTTGTCTTTGGTATAATGCTTAGTTAGTTCTGCA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I a score=6381.000000 s hg38.chr18_GL383571v1_alt 138969 2 + 198278 -TC s panTro5.chr18 65048998 2 + 78221452 -TC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168056 2 + 77229886 -TC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387561 2 + 17472758 -TC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427719 2 - 152096393 -TC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378093 2 + 70235451 -TC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069496 2 - 75711847 -TC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13628711 2 - 18804593 -TC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13240207 2 + 18905526 -TC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60068837 2 - 72318688 -TC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 406191 2 - 1517660 -TC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3502807 2 + 6513552 -TC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105270899 2 + 117903854 -TC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19459642 2 - 31320352 -TC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1655141 2 + 2203405 -TC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3607091 2 - 14941987 -TC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1264776 1 - 1406956 -T- i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112312104 1 - 122678785 -T- i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 492841 2 - 2150887 TT- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e otoGar3.GL873546 11234200 1 - 20685099 I a score=3032057.000000 s hg38.chr18_GL383571v1_alt 138971 251 + 198278 TTTTACCCTCAATATTATTCAAGCAATTATTTCCTCATAGTAA-TCTGAAATGTCTGTGATTACATTTA---------------------TGGCATAAATCCACT-GAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGCTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAGGTACTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGTTAAGAATAAACTTGAAATATATCCAAATAAATTAGCAATTAGGTCAACAGT--TGTGTGA-------- s panTro5.chr18 65049000 251 + 78221452 TTTTACCCTCAATATTATACAAGCAATTATTTCCTCATAGTAA-TCTGAAATGTCTGTGATTACATTTA---------------------TGGCATAAATCCACT-GAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGCTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAGGTACTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGTTAAGAATAAACTTGAAATATATCCAAATAAATTAGCAATTAGGTCAACAGT--TGTGTGA-------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168058 251 + 77229886 TTTTACCCTCAATATTATACAAGCAATTATTTCCTCATAGTAA-TCTGAAATGTCTGTGATTACATTTA---------------------TGGCATAAATCCACT-GAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGCTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAGGTACTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGTTAAGAATAAACTTGAAATATATCCAAATAAATTAGCAATTAGGTCAACAGT--TGTGTGA-------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387563 250 + 17472758 TTTTACCCTCAATATTATACAAGCAATTATTTCCTCATAGTAA-TCTGAAATGTCTGTGATTACATTTA---------------------TGGCATAAATCCACT-GAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGCTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAGGTACTTTAGAAA-CTA-------------------------------------------------------------------------------------------------------------------------TTGTTAAGAATAAACTTGAAATATATCCAAATAAATTAGCAATTAGCTCAACAGT--TGTGTGA-------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427721 251 - 152096393 TTTTACCCTCAATATTATACAAGCAATTATTTCCTCATAGTAA-TCTGAAATGTCTGTGATTATATTTA---------------------TGCCATAAATCCACT-GAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAGGCACTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGTTAAGAATAAACTTGAAACATATCTAAATAAATTAGCAATTAGCTCAACAGT--TGTGTGA-------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378095 249 + 70235451 TTTTACCCTCAATATCATACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTTGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACTCATTAATTATTGC--ATTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTA----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAGTAAATTAGAAATTAGCTCAATAGT--TGTGAGA-------- i rheMac8.chr18 C 0 I 2 s macFas5.chr18 63069498 249 - 75711847 TTTTACCCTCAATATCATACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTTGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACTCATTAATTATTGC--ATTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTA----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAGTAAATTAGAAATTAGCTCAATAGT--TGTGAGA-------- i macFas5.chr18 C 0 I 2 s macNem1.NW_012016688v1 13628713 249 - 18804593 TTTTACCCTCAATATCATACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTTGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACTCATTAATTATTGC--ATTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTA----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAGTAAATTAGAAATTAGCTCAATAGT--TGTGAGA-------- i macNem1.NW_012016688v1 C 0 I 2 s cerAty1.NW_012001075v1 13240209 251 + 18905526 TTTTACCCTCAATATCATACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTTGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGC--ACTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTA----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAATAAATTAGAAATTAGCTCAATAGTTGTGTGAGA-------- i cerAty1.NW_012001075v1 C 0 I 2 s chlSab2.chr18 60068839 245 - 72318688 TTTTACCCTCAATATCATACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTTGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGC--ATTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTA----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAATA----AGCAATTAGCTCAATAGT--TGTGTGA-------- i chlSab2.chr18 C 0 I 4 s manLeu1.NW_012106698v1 406193 249 - 1517660 TTTTACCCTCAATATCATACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTTGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGC--ATTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTG----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAGTAAATTAGTAATTAGCTCAATAGt--tgtgtga-------- i manLeu1.NW_012106698v1 C 0 I 871 s colAng1.NW_012115433v1 3502809 249 + 6513552 TTTCACCCTCAATAGCACACAAGCAATTATGTCCTCATAGTAA-TCTGACATGTCTGTGATTACATTTA---------------------TGCCATAAATCCACTCGAAATATATTTTAGGGTATGT-GA--GAAAAATAAGATTAGTTCTTAATGTGT-----ATGTTTCACCCATTAATTATTGC--ATTGGAG---ATAC------T---ATAAGGTATTTTAGAAAGCTA----------------------------------------------------------------------------------------------------------------------------TTAAGAATAAACTTGAAATATATCCAAATAAATTAGAAATTAGCTCAATAGT--TGTGTGA-------- i colAng1.NW_012115433v1 C 0 I 4 s calJac3.chr13 105270901 250 + 117903854 TTTTACCCTCAATATTATACAAGCAATTATTTCCTCGTAGTAA-TTTGAAATGCCTGTGATTACATTTA---------------------AGCCATAAATCTGCTTGAAAAATATCTTAGGGCACAT-GA--GAAAAATAAGATTAGTTCTTATTGTGCACAATATGTTTCACCC-------ATTGA--ATTGGAG---ATAC------T---ATAAAATACTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGTGAAGAATAAACTTAAAATATACCCAAATAAATTAGCAATTAGCTCAAGAGT--TATATGA-------- i calJac3.chr13 C 0 I 3 s saiBol1.JH378121 19459644 257 - 31320352 TTTTACCTTCAGTATTATAGAAGCAATTATTTCCTCATAGTAA-TTTGAAATGCCTGTGATTACATTTA---------------------ACCCATAAATCCACTTGAAATATATTTTAGGGCACAT-GA--GAAAAATAAGATTAGTTCTTATTGTGCACAATATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAAGTACTTTAGAAAGTTA-------------------------------------------------------------------------------------------------------------------------CTGGGAAGAATAAACTTAAAATATACCCAAATAAATTAGCAATTAGCTCAAGAGT--TGTATGA-------- i saiBol1.JH378121 C 0 I 4 s cebCap1.NW_016107689v1 1655143 250 + 2203405 TTTTACCCTCAGCATTACACAAGCAATTATTTCCTCATAGTAA-TTTGAAATGCCTGTGATTACATTTA---------------------AGCCATAAATCCACTTGAAATATATTTTAGGGCACAT-GA--GAAAAATAAGATTAGTTCTTAATATGCACA--ATGTTTCACCT-------ATTAATTATTGGAG---AAAC------T---ATAAAGTACTTTAGAAAGCTG-------------------------------------------------------------------------------------------------------------------------TTGTGAAGAATAAATTTTAAATATACCCAAATAAATTAGCAATTAGCTCAAGAGT--TATATGA-------- i cebCap1.NW_016107689v1 C 0 I 4 s aotNan1.NW_018502140v1 3607093 257 - 14941987 TTTTACCCTCAATATTATATAAGCAATTATTTCCTCATAGTAA-TCTGAAATGCCTGTGATTACATTTA---------------------AGCCATAAATCCACTTGAAATATATTTTAGGGCACAT-GA--GAAAAATAAGATTAGTTCTTATTGTGCACAATATGTTTCACCCATTAATTATTGA--ATTGGAG---ATAC------T---ATAAAGTACTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGGGAAGAATAAACTTAAAATATACCCAAATAAATTAGCAATTAGCTCGAGAGT--TATATGA-------- i aotNan1.NW_018502140v1 C 0 I 4 s proCoq1.NW_012148742v1 1264777 260 - 1406956 TTTTACCATCA-TATTATATAAACAATCATTTCCTCACAGTAA-TTTGAAATGTCTGTGTTTACATTTA---------------------TGCTATCAATCCATCTGCAATAAATTTTAGGGCATATGGG--GAAAAATAAGATTAGTTCTTACTGTGCATA--ATGTTTTAC-CATTAACCACTCT--ATTGGAG---ATACTATTAAT---AAAAATTTCTTTAGAAAGCTA-------------------------------------------------------------------------------------------------------------------------TTGTGAAGAATAAACTTGAAATACATCTAAAGAAATTAACAATTAGCTCAATAGT--TGTACCA-------- i proCoq1.NW_012148742v1 C 0 I 4 s otoGar3.GL873546 11234201 254 - 20685099 TTTTACCATTA-TGTTACATAAAATATTTTTTCCTCAGAGCAA-TATGAAATGCCTGTGTTTACATTTA---------------------AGCTATGGGTTTATCTGCAATAAATTTTAGGGCATATGGG--GAAGAATAAGATTAATTCTTATTGTGCATA--ATTCTTCACACATTAACTACTGA--ATTGGAG---ATAC------T---AACAATTTCTTCAGATAGCTA-------------------------------------------------------------------------------------------------------------------------TTA-GAAAAGTAAACTTGAAATATATCTACAGAAATTAGCAATTGGCTCAATAGC--AGCACTC-------- i otoGar3.GL873546 I 1 I 4 s canFam3.chr1 112312105 377 - 122678785 CTTCGCCC---ATATTATAGGAACAATTCTTTCCTCTTTGTCA-TTTGAAATGCCTGTGTTTACACTGC---------------------TATCATTAATGCATCTGAAACATATTTTAGGGCACTT-GGGTGAAAAATAAGATTGGTTCCTATCATGCACAACATGCTTCACCCTCTAATTACTGA--ATTGGAT---GCCC------TGACACCAATGACTTTAGAAAGCCGGGGAGAGGGGCACCAGAGTggttccctgcatggagcctgcttctccctctgcctgtgtctctgcctctctctctgtgtctttcatgaataaataaataaaatcttaaaaaaaaaGAAGCCATGGGAAACGATAAACTTGAAATATACCTAAAGAAATTAGCAATTAGGTCAATATT-----GAGA-------- i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 492843 288 - 2150887 CTTTAACCTCAACAATATATAAACAATTACTTCTTCATAGTACTTTTGAAATATCTGTATTTACATTCATTATTATTTTTATTGCTGAATTGCCATTAATCTTTCTGAAATACGTTTTAGGATATTT-GG--AGGAAGTAGGGTAAGAGCGTATTATATGAt--atgtcttatcctctatttattaa--attggggatcataa------t---gataactattttagagagtta-------------------------------------------------------------------------------------------------------------------------aagtgaagaatagacttgaaatatatctaaaacaattaTCAATTAGCCCAATAGT--TGTAGTTACATTTAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I a score=1334310.000000 s hg38.chr18_GL383571v1_alt 139222 117 + 198278 GAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAAATTATACTTTTAATCTCAATTCAGATCACTTTATCTATTAATGTAACTTTCTAAACC-TAAAAGTGAAAGAACATT s panTro5.chr18 65049251 117 + 78221452 GAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAAATTATACTTTTAATCTCAATTCAGATCACTGTATCTATTAATGTACCTTCCTAAACC-TAAAAGTGAAAGAACATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168309 117 + 77229886 GAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAAATTATACTTTTAATCTCAATTCAGATCACTTTATCTATTAATGTACCTTTCTAAACC-TAAAAGTGAAAGAACATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387813 117 + 17472758 GAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAAATTATATTTTTAATCTCAATTCAGATCACTTTACCTATTAATATACCTTTCTAAACC-TAAAAGTGAAAGAACATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139427972 117 - 152096393 GAATTATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTC-GATCACTTTATCTATTAATGTACCTTTCTAAACC-TAAAAGTGAAAGAACATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378346 116 + 70235451 TAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTCAGATCACT-TATCTATTCATGTACCTTTCTAAACC-TAAAGGTGAAAGAACATT i rheMac8.chr18 I 2 C 0 s macFas5.chr18 63069749 116 - 75711847 TAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTCAGATCACT-TATCTATTCATGTACCTTTCTAAACC-TAAAGGTGAAAGAACATT i macFas5.chr18 I 2 C 0 s macNem1.NW_012016688v1 13628964 116 - 18804593 TAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTCAGATCACT-TATCTATTCATGTACCTTTCTAAACC-TAAAGGTGAAAGAACATT i macNem1.NW_012016688v1 I 2 C 0 s cerAty1.NW_012001075v1 13240462 116 + 18905526 TAA-TATTATTGGACCTAT-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTCAGATCACT-TATCTATTCATGTACCTTTCTAAACC-TAAAGGTGAAAGAACATT i cerAty1.NW_012001075v1 I 2 I 319 s chlSab2.chr18 60069088 116 - 72318688 TAA-TATTATTGGATCTAC-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTCAGATCACT-TATCTATTCATGTACCTTTCTAAACC-TAAAGGTGAAAGAACATT i chlSab2.chr18 I 4 C 0 s colAng1.NW_012115433v1 3503062 116 + 6513552 TAA-TATTATTAGATCTAC-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCTCAATTCAGATCACT-TATCTATTCAGGTACCTTTCTAAACC-TAAAGGTGAAAGAACATT i colAng1.NW_012115433v1 I 4 C 0 s calJac3.chr13 105271154 112 + 117903854 -------TATTGGATCTGTAATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCCCAGTTCAGATCACTTTGTTTATTCATGTACCTTTCTAAACC-TAAAAGTGAAAGGACATT i calJac3.chr13 I 3 C 0 s saiBol1.JH378121 19459905 117 - 31320352 TAA-TATTACTGGATATAT-ATTTACCTTATT------ATTGAAAAGTAGATTATACTTTTAATCCCAATTCAGATCACTTTATTTATTCATGTACCTTTCTAAACC-TAAAAGTGAAAGGACATT i saiBol1.JH378121 I 4 C 0 s cebCap1.NW_016107689v1 1655397 118 + 2203405 TAA-TATTACTGGATCTAT-ATTTACCTTATT------ACTGAAATGTAGATTATACTTTTAATCCCAATTCAGATCTCTTTATTTATTCATGTACCTTTCTAAACCTTAAAAGTGAAACGACATT i cebCap1.NW_016107689v1 I 4 C 0 s aotNan1.NW_018502140v1 3607354 117 - 14941987 TAA-TATTACTGGATCTAT-ATTTACTTCATC------ATTGAAAAGTAGATTATACTTTTAATCCCAATTCAGATCACTTTATTTATTCATGTACCTTTCTAAACC-TAAAAGTGAAAGGACATT i aotNan1.NW_018502140v1 I 4 C 0 s proCoq1.NW_012148742v1 1265041 118 - 1406956 TAA-TATTACTGAGTCTAC-ATTTACTTTATT-----AATTGAAAAGTAGATTATGGTTCTTATCCAAATTCAGATCATTTTATCTACTCATGTATCTTTCCAAACC-Taaaaatgagaagatatt i proCoq1.NW_012148742v1 I 4 C 0 s otoGar3.GL873546 11234459 115 - 20685099 TAA-TATTACCGAGTCTAT-ATTTACTTTATT------ATTGAAAAGTAGATTATGATTCTTATCCAATTTCAGATCACTTTATCTA--CACGTCTCTTTTTAAACC-TGCCAGTGAGAAGATATT i otoGar3.GL873546 I 4 C 0 s canFam3.chr1 112312484 105 - 122678785 TAA-TATTACTGGGCCTAC-ATTTACTTCATT-----AATTGAAAACTGGATT-CAAGTTAGGTACCAGTTCAGAACACTTTAT------------CTTTATAAACC-TGAAAGTAAAAGGCCATG i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 493131 120 - 2150887 TAG-TACTA--AAATCTAC-ATTTATCGTATACTGCTAATTGAAAAGTAGATTATAATT-TGATCCCAATTCAAATCACTTTATCTACTTATGTATCTTTATAAACC-AGAAAGtgaaagaacact i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e manLeu1.NW_012106698v1 406442 871 - 1517660 I a score=737124.000000 s hg38.chr18_GL383571v1_alt 139339 67 + 198278 AAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGCTTTTGT---GG-------TGCCCCT-------CATATTTCTCTGTATTT s panTro5.chr18 65049368 67 + 78221452 AAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGCTTTTGT---GG-------TGCCCCT-------CATATTTCTCTGTATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168426 67 + 77229886 AAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGCTTTTGT---GG-------TGCCCCT-------CATATTTCTCTGTGTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387930 67 + 17472758 AAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGCTTTTGT---GG-------TGCCCCT-------CATATTTCTCTGTATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139428089 66 - 152096393 AAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGC-TTTGT---GG-------TGCCCCT-------CATATTTCTCTGTATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378462 67 + 70235451 AAGAAAAATGC---T---GGTAGATATTTCTCAGAGAGGGCTTTTGG---GG-------TGCCCCT-------CATATTTCTCTGTATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069865 67 - 75711847 AAGAAAAATGC---T---GGTAGATATTTCTCAGAGAGGGCTTTTGG---GG-------TGCCCCT-------CATATTTCTCTGTATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13629080 67 - 18804593 AAGAAAAATGC---T---GGTAGATATTTCTCAGAGAGGGCTTTTGG---GG-------TGCCCCT-------CATATTTCTCTGTATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13240897 67 + 18905526 aagaaaaaTGC---T---GGTAGATATTTCTCAGAGAGGGCTTTTGG---GG-------TGCCCCT-------CATATTTCTCTGTATTT i cerAty1.NW_012001075v1 I 319 C 0 s chlSab2.chr18 60069204 67 - 72318688 AAGAAAAATTC---T---GGTAGATATTTCTCAGAGAGGGCTTTTGG---GG-------TACCCCT-------CATATTTCTCTGTATTT i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3503178 67 + 6513552 AAGAAAAATGC---T---GGTAGATATTTCTCAGAGAGGGCTTTTGG---GG-------TGCCCCT-------CACATTTCTCTGTATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105271266 67 + 117903854 CAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGTTTTTGG---GG-------TGCCCCT-------CATATTTCTCTTTATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19460022 67 - 31320352 CAGAAAAATGC---T---AGTAAATATTTCTCAGAGAAGATTTCTGG---GG-------TGCCCCT-------CATATTTCTCTTTATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1655515 67 + 2203405 CAGAAAAATGC---T---AGTAGATATTTCTCAGAGAGGGTTTTTGG---GG-------TGCCCCT-------CATATTTCTCTTTATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3607471 67 - 14941987 CAGAACAATGC---T---AGTAGATATTTCTCAGAGAGGGTTTTTGG---GG-------TGCCCCT-------CATATTTCTCTTTATTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1265159 70 - 1406956 cggtaaaatgt---taacagtagatatttctcagggaggaatttttc---ag-------tgccttt-------catatttttctgtattt i proCoq1.NW_012148742v1 C 0 I 87 s otoGar3.GL873546 11234574 68 - 20685099 CCGTAAAATGT---TAACAATAGATACTTCTGA-GAAGGATTTTTTG---CG-------TGCTCTC-------CATA-CTTTCTGTATTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112312589 71 - 122678785 --GTTAAATGTGAAT---AACAGCTATTTCTCAGAGGGGGGGCGGGGTTCAG-------TGTTCTT-------CAAATTTTTCTACATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 493251 78 - 2150887 cagcaaaa------t---agtagttatttctgagagaagggttttgt---tgctttttatgtccttatttttccagctttttctgtattt i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e manLeu1.NW_012106698v1 406442 871 - 1517660 I a score=641538.000000 s hg38.chr18_GL383571v1_alt 139406 82 + 198278 TTAAAGACATTCTTCAA-AACATACCT--A--TTTTTTAATACAAAAAAAGGACTTTTCTAA-TTTTTCTC--CTTCCACAATACTGTAC s panTro5.chr18 65049435 82 + 78221452 TTAAAGACATTCTTCAA-AACATACCT--A--TTTTTTAATACAAAAAAAGGACTTTTCTAA-TTTTTCTC--CTTCCACAATACTGTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168493 82 + 77229886 TTAAAGACATTCTTCAA-AACATACCT--A--TTTTTTAATACAAAAAAAGGACTTTTCTAA-TTTTTCTC--CTTCCACAATACTGTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5387997 82 + 17472758 TTAAAGAGATTCTTCAA-AACATACCT--A--TTTTTTAATACAAAAAAAGGACTTTTCTAA-TTTTTCTC--CTTCCACAATACTGTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139428155 82 - 152096393 TTAAAGACATTCTTCAA-AACATACCT--A-TTTTTTTAATAC-AAAAAAGGACTTTTCTAA-TTTTTCTC--CTTCCACAATACTGTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378529 80 + 70235451 TTAAAGACATTCTTCAA-AACATACC------TTTTTTAATACAAAAAAAGGACTTTTCTAA-ACTTTCTC--CTTCCACAATACTGTAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63069932 80 - 75711847 TTAAAGACATTCTTCAA-AACATACC------TTTTTTAATACAAAAAAAGGACTTTTCTAA-ACTTTCTC--CTTCCACAATACTGTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13629147 80 - 18804593 TTAAAGACATTCTTCAA-AACATACC------TTTTTTAATACAAAAAAAGGACTTTTCTAA-ACTTTCTC--CTTCCACAATACTGTAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13240964 77 + 18905526 TTAAAGACATTCTTCAA-AACATAC---------TTGTAATACAAAAAAAGGACTTTTCTAA-ATTTCCTC--CTTCCACAATACTGTAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60069271 81 - 72318688 TTAAAGACATTCTTCAA-AACATACCT-----TTTTTTAATACAAAAAAAGGACTTTTCTAA-ATTTTCTC--CTTCCACAATACTGTAC i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3503245 81 + 6513552 TTAAAGACATTCTTCAA-AACATACCT-----TTTTTTAATACAAAAAAAGGACTTTTCTAA-ATTTTCTC--CTTCCACAATACTGTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105271333 81 + 117903854 TTAAAGACATTTTTCAA-AACATATCT--A--TTTTTTAATATAAAA-CAGGACTTTCCTAG-ATGTTCTC--CTTCCACAATCCTATAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19460089 80 - 31320352 TTAAAGACATTTTTCAA-AACATACCT--A---TTTTTAATACAAAA-AAGGACTTTCCTAG-ATGTTCTC--CTTCCACAATACTATAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1655582 80 + 2203405 TTAAAGACATTTTTCAA-AACATAACT--A--TTTTTTAATACAAAA--ATGACTTTCCTAG-ATGTTTTC--CTTCCACAATACTATAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3607538 80 - 14941987 TTAAAGACATTTTTCAA-AACATATCT--A--TTTTTTAATACAAAA--GGGACTTTTCTAG-ATGTTCTC--CTTCCACAATACTATAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11234642 84 - 20685099 -TCAAAACTTTCTTCAA-ACAATACAC--AGTATTTTTGGTCAGCAAAAAATACTTTTCTAACATTTCCCC--CTCCCTCAACATCATCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112312660 59 - 122678785 -TCAAAATTTTCTTTAA-AGAATAC-------ATTTAAAAAAAAAAATCAGAACTCCCCTCT-----------------CAGTGC----- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 493329 78 - 2150887 -tcaaaactttctttaagaatatacattta--tttttaattagaaaaaaTGAAATTTTCTAA-TCTCTATCATCTTCTACAC-------- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1265229 87 - 1406956 I e manLeu1.NW_012106698v1 406442 871 - 1517660 I a score=942000.000000 s hg38.chr18_GL383571v1_alt 139488 82 + 198278 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-GTGCTGAAAATGAGCGAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT s panTro5.chr18 65049517 82 + 78221452 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-GTGCTGAAAATGAGCGAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168575 82 + 77229886 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-GTGCTGAAAATGAGCAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5388079 82 + 17472758 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-GTGCTGAAAATGAGCGAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139428237 82 - 152096393 TGTAATGAGAGCAAAGAATATCACTT-TAAAAA-GTGCTGAAAATGAGTGCAAGGGTAAGATTAAAACAGAACT------TTTTGCAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378609 82 + 70235451 TATAATGAGAACAAAGAATATCACTT-TAAAAA-ATGCTGAAAATGAGTAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63070012 82 - 75711847 TATAATGAGAACAAAGAATATCACTT-TAAAAA-ATGCTGAAAATGAGTAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13629227 82 - 18804593 TATAATGAGAACAAAGAATATCACTT-TAAAAA-ATGCTGAAAATGAGTAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13241041 82 + 18905526 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-ATGCTGAAAATGAGTAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60069352 82 - 72318688 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-ATGCTGAAAATGAGTAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3503326 82 + 6513552 TATAATGAGAGCAAAGAATATCACTT-TAAAAA-ATGCTGAAAATGAGCAAAAGGGTAAGATTAAAACAAAACT------TTTTGCAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105271414 74 + 117903854 TATAATGGGAGCAAAGAATATTACTT-TAAAAA-ATGCTGAAAATGAGCGAA--------ATTAAAACAAAACT------TTTTGCAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19460169 80 - 31320352 TATAATGAGAGCAAATAATATTACTT-TAAAAA-ATGCTGAAAATGAGTGAAAGGAT--GATTAAAACAAAACT------TTTTGTAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1655662 82 + 2203405 TATAATGAGAGCAAAGAATATTACTT-CAAAAA-ATGCTGAAAATGGGTGAAAGGATAAGATTAAAGCAAAACT------TTTTGCAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3607618 82 - 14941987 TATAATGAGAGCAAAGAACATTATTT-TTAAAA-ATGCTGAAAATGAGCGAAAGGATAAGATTAAAACAAAACT------TTTTGCAAAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1265316 82 - 1406956 TATAATAAGAATAAAGAATATCACTC-TAAAAA-ATGCTGAAAGTAATAGGAAGGACAAGACTAGAACAAAACA------TTTTGCAAAT i proCoq1.NW_012148742v1 I 87 I 1120 s otoGar3.GL873546 11234726 84 - 20685099 --TA--GAGAGTAAAGAAAGTCACAC-TAAGAA-AGGCTGAAGATAAGAGAAAGGACAAGACTAGGAAAAAAAAAACCACTTTGGTAAAT i otoGar3.GL873546 C 0 I 8 s canFam3.chr1 112312719 83 - 122678785 CTCCTTAAGAATAAAGAGTACTACTCATAAAAA-GAGCTGAAAATGAAGAAAAGGGTAAGATAGAGCCAAACAT------GTTCCTGAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 493407 83 - 2150887 TATAATGAGAGGAAAGAAAATCACTC-TAAAAAGAGGTTGAAAATGAGGAGGAGAATAAGACAAAGACAAAGAT------TGGTGCAAAT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e manLeu1.NW_012106698v1 406442 871 - 1517660 I a score=1149445.000000 s hg38.chr18_GL383571v1_alt 139570 148 + 198278 GGTTGAAAAA----GA-------ACAATTC---TT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAACAGACCTGTGGGAGCTGTTGCAGGAGCTGTTGTTCAA-GCAGAGATCTCTGAAAAAAC-C--AGAGCTAC---ATATGGA-AAG------GAAAGAACTTCACA s panTro5.chr18 65049599 138 + 78221452 GGTTGAAAAA----GA-------ACAATTC---TT------GTTAAAGTGGGGCAGAGAGAGCACAAGTG----------GACCTGTGGGAGCTGTTGCGGGAGCTGTTGTTCAA-GCAGAGATCTCTGAAAAAAC-C--AGAGCCAC---GTATGGA-AAG------GAAAGAACTTCAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168657 148 + 77229886 GGTTGAAAAA----GA-------ACAATTC---TT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGGACCTGTGGGAGCTGTAGCGGGAGCTGTTGTTCAA-GCAGAGATCTCTGAAAAAAC-C--AGAGCCAC---GTATGGA-AAG------GAAAGAACTTCAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5388161 147 + 17472758 -GTTGAAAAA----GA-------ACAATTC---TT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGGACCTGTGGGAGCTGTTGCGGGAGCTGTTGTTCAA-GCAGAGATCTCCAAAAAAAC-C--AGAGCTAC---ATATGGA-AAG------GAAAGAACTTCAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139428319 135 - 152096393 GGTTGAAAAA----GA-------ACAATTC---TT------GTTAAAGTGGGACAGAGGGGGCACAAGTGCACAGAAATGGACCTGTG------------GGAGCTGTTGTTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------GAAAGAACTTCAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378691 154 + 70235451 GGTTGAAAGAGACAGA-------AAAATTCTTGTT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGCACCCgtgggagctgttgtgggagctgttgtTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------CAAAGAACTTCAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63070094 154 - 75711847 GGTTGAAAGAGACAGA-------AAAATTCTTGTT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGCACCCgtgggagctgttgtgggagctgttgtTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------CAAAGAACTTCAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13629309 154 - 18804593 GGTTGAAAGAGACAGA-------AAAATTCTTGTT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGCACCCgtgggagctgttgtgggagctgttgtTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------CAAAGAACTTCAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13241123 154 + 18905526 GGTTGAAAGAGACAGA-------AAAATTCTTGTT------GTTAAAGTGGGACAGAGACAGCACAAGTGCACAGAAATGCACCCgtgggagctgttgtgggagctgttgtTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------CAAAGAACTTCAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60069434 154 - 72318688 GGTTGAAAGAGACTGA-------AAAATTCTTGTT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGCACCCgtgggagctgttgtgggagctgttgtTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------CAAAGAACTTCAGA i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3503408 154 + 6513552 GGTTGAAAGAGACAGA-------ACAATTCTTGTT------GTTAAAGTGGGACAGAGAGAGCACAAGTGCACAGAAATGCACCCGTGGGAGCTGTTGTGGGAGCTATTGTTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTAC---ATATGGA-AAG------CAAAGAACTTCAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105271488 146 + 117903854 GTTTGAAAGAGACAGA-------AGAATTC---TT------GTTAAAGTGGGACAGAGAGAGCACAGGTGGACAGAA--------GGGAGACTGGATGTGGGAGCTGTTGTTCAA-GCAGAGACCTCTG-AACAAC-C--AGAGCTATCAGATACAGA-GAG------GAAAGAACTTCAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19460249 146 - 31320352 GGTTGAAAGAGACAGA-------AAAATTC---TT------GTTAAAGTGGGACAGAGAGAGCACAGGTGGACAGAA--------GGGAGAGTGGATGTGGGAGCTGTTGTTCAA-GCAGAGATCTCTG-AAAAAC-C--AGAGCTATCAGATACCGA-GAG------GAAAGAACTTCAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1655744 121 + 2203405 GGTGCAAAGAGACAG----------AATTC---TT------GTTAAAGTGGGCCAGAGAGAGCACAG------------------------------GTGGGAGCTGTTGTTCAA-GCAGAGACCTCTG-GAAAAC-C--AGAGCTATCAGATACGGA-GAG------GAAAGAACTTCAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3607700 146 - 14941987 TGTTGAAAGAGACAGA-------AGAATTC---TT------GTTAAAGTGGGACAGAGACAGCACAGGTGGACAGAA--------GGGAGAGTGGATGTGGGAGCTGTTGTTCAA-GCAGAGACCTCTG-AAAAAC-C--AGAGCTATCAGATACGGA-GAG------GAAAGAACTTCAGA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11234818 147 - 20685099 GGCAGAGGCAGACAGA-------ATAATTC-TGTT------GTTACGGTGGGACAGAGTGAGCTCAGGTGCACAGA---------TGGGGAGAGGATGTCGGAGCTGATGTTCAAGGTGGTGATCGTCA-AAAAGCAA--AGCACTAG---ATTCGGACGGG------GAAAGGCCGGCACA i otoGar3.GL873546 I 8 C 0 s canFam3.chr1 112312802 155 - 122678785 --TCTAGAAACACAGAGGCAGCCAGAATCT---CTGGTCAAGTTCAAGTGAGGCAG-GACCACTCAGGTGCACAGA---------TGCGGGGTGGCCACCGAAGCTATTTTTCAAGGCAGAGATCCCTG-AAAGAT-CAGAGAGTCAG---ATTAGGA-GAG------AAATGAACTTGACA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 493490 147 - 2150887 CTGTGAAGGAGAGACA-------GAGTTTA---CT------CATAGAGCAGAAGAGAGAACCGGCAGTTGCACAGAG--------GAGGGCGTGAATGCTGTAGCTATTA---AA-GTAGAGACCCCTT-AGGGATAA--AGAGCTAA---GTAAAGT-AAGAGGAGAAAGAGAACTTCACA i dasNov3.JH575754 C 0 I 2362 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1265398 1120 - 1406956 I e manLeu1.NW_012106698v1 406442 871 - 1517660 I a score=6018200.000000 s hg38.chr18_GL383571v1_alt 139718 674 + 198278 AAcagttgatcctcattatgtgcagatt-tgcatttgtaagtttgacttcttgctaaaaggta--tgttccctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaatttaagtta--------cctggagagagagcacattcccaactgaggttgaacaaggtagtgctttgcctgtttgtttccactttcatgctataaacaagtgcattcttaagggcttatttaatgccacgtttttcacacttttttgtgtgattttt-gttggtgagtttgctgtttaaa--ttggccccaaagtgtagtgttgcaggg----cta-atagtgttcctagactaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgttggctgtgagttcaatgtcaaaaaccaatcaacaatatttattatataaggtgtccttaaacagaaacactcatgaaccaaggt----ta----ttgac----t------------------------------gataaa-----aatttagtgaccaaaggcttccacca-ccctaaccctttatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------ttgttcactaattcagtgtttgcaacaatgttatatgacataattactgcagaaaacaagaaacaactgTAAC--TGATTGTACTATT-ATATGC s panTro5.chr18 65049737 673 + 78221452 AAcagttgatcctcattatgtgcagatt-tgcatttgtaagtttgacttcttgctaaaaggta--tgttccctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaatttaagtta--------cctggagagagagcacattcccaactgaggttgaacaaggtagtgctttgcctgtttgtttccactttcatgctataaacaagtgcattcttaagggcttatttaatgccacgtttttcacacttttttgtgtgattttt-gttggtgagtttgctgtttaaa--ttggccccaaagtgtagtgttgcaggg----cta-atagtgttcctagactaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgttggctgtgagttcaatgtcaaaaaccaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaaggt----ta----ttgac----t------------------------------gataaa-----aatttagtgaccaaaggcttccagga-ccctaaccctgtatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------ttgttcactaattaagtgtttgcaacaatgtta-atgacataattactgcagaaaacaagaaacaacGGTGAC--CGATTGTACTAAT-ATCTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64168805 674 + 77229886 AAcagttgatcctcattatgtgcagatt-tgcatttgtaagtttgacttcttgctaaaaggta--tgttccctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaatttaagtta--------cctggagagagagcacattcccaactgaggttgaacaaggtagtgctttgcctgtttgtttccactttcatgctataaacaagtgcattcttaagggcttatttaatgccacgtttttcacacttttttgtgtgattttt-gttggtgagtttgctgtttaaa--ttggccccaaagtgtagtgttgcaggg----cta-atagtgttcctagactaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgttggctgtgagttcaatgtcaaaaaccaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaaggt----ta----ttgac----t------------------------------gataaa-----aacttagtgaccaaaggcttccagga-ccctaaccctgtatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------ttgttcactaattcagtgtttgcaacaatgttatatgacataattactgcagaaaacaagaaacaaccgTAAC--CGATTGTACTATT-ATCTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5388308 675 + 17472758 AAcagttgatcctcattatgtgcagatt-tgcatttgtaagtttgacttcttgctaaaaggta--tgttccctcaaaaatcaataatcacggtcaatggtcatttgcagatatatgcagagtggc-aaaaaatttaagtta--------cctggagagagagcatattcccaactgaggttgaacaaggtagtactttgcctgtttgtttccactttcaggctataaacaagtgcattcttaagggcttatttaatgccacgtttttcacacttttttgtgtgattttt--ttggtgagtttgctgtttaaa--ttggccccaaagtgtagtgttgcagggctgtcta-atagtgttcctagactaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgttggctgtgagttcaatgtcaacaaccaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaaggt----ta----ttgac----t------------------------------gataaa-----aatttagtgaccaaaggcttccagga-ccctaaccctgtatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------ttg-tcactaattcagtgtttgcaacaatgtta-atgacataattactgcagaaaacaagaaacaactgTAAC--TGATTGCACTATT-ATCTGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139428454 674 - 152096393 AAcagttgatcctccttatatgcagatt-tgcatttgtaagtttgacttcttgctaaaatgta--tgttacctcaaaaatcaataatcactgtcaatggtcatttgcagatacatgcagagcggc-aaaaaatttaagtta--------cctggagagagagcacattcccaaccgaggttgaacaaggtagtgctttgcctgtttgtttccactttcatgctataagcaagtgcacttttcagggcttatttaatgtcacgtttttcacacttttttgtgtgattttt-gctggtgagtttgctgtttaaa--ttggccccaaagtgtagtgttgcaggg----cta-atagtgttcctagactaaagaagccta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcgggtatgagttacagtgctgttggctgtgagttcaatgtcaaaaaccaatcagcaatatttattatataaggtgtctttaaacagaaacactcatgaaccaaggt----ta----ttgac----t------------------------------gataaa-----aatttagtgaacaaaggcttccagga-ccctaaccctgtatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------ttgttcactaattcagtgtttgcaacaatgttatatgacacaattactgcagaaaacaagaaacaactgTAAT--TGACTGTACTATT-ATCTGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57378845 656 + 70235451 AGcagttgatcctcattgtgtgcagatt-tgcatttgtaagtttgtcttcttgctacaatgta--tgttacttcaaaa---aataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaattt--gtta--------cctggagagagagcacattcccagctgaggttgaacaaggtagtgcttttcctgtttgtttccagtttcatgctataaacaagtgcacttttaacggtttatttaatgccacatttttcacacttttttgtgtgattttt--ttggtgagtttgccgtttgaa--ttggccccaaagtgtagtgttgcaggg----ctgtctagcgttcctaggctaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgtaggctgtgagttcaatgtcaaaaatcaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaagct----ta----ttgactgatt------------------------------gataaa-----aatttagtgatcaaaggcttccagga-ccctaaccctgtacttcccc-aggagcaa------------------------------------------------------------------------------------------------tgttcactaattcagtgtttgcaacaat-----atgacataagtactgcagaaaacaagaaacaactgC------GATTGGACTACT-ACCTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63070248 659 - 75711847 AGcagttgatcctcattgtgtgcagatt-tgcatttgtaagtttgtcttcttgctacaatgta--tgttacttcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaattt--gtta--------cctggagagagagcacattcccagctgaggttgaacaaggtagtgcttttcctgtttgtttccactttcatgctataaacaagtgcacttttaacggtttatttaatgccacatttttcacacttttttgtgtgattttt--ttggtgagtttgccgtttgaa--ttggccccaaagtgtagtgttgcaggg----ctgtctagcgttcctaagctaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgtaggctgtgagttcaatgtcaaaaatcaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaagct----ta----ttgactgatt------------------------------gataaa-----aatttagtgatcaaaggcttccagga-ccctaaccctgtacttcccc-aggagcaa------------------------------------------------------------------------------------------------tgttcactaattcagtgtttgcaacaat-----atgacataagtactgcagaaaacaagaaacaactgC------GATTGGACTACT-ACCTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13629463 659 - 18804593 AGcagttgatcctcattgtgtgcagatt-tgcatttgtaagtttgtcttcttgctacaatgta--tgttacttcaaaaatcaataatcactgtcactggtcatttgcagatatatgcagagtggc-aaaaaattt--gtta--------cctggagagagagcacattcccagctgaggttgaacaaggtagtgcttttcctgtttgtttccactttcatgctataaacaagtgcacttttaacggtttatttaatgccacatttttcacacttttttgtgtgattttt--ttggtgagtttgccgtttgaa--ttggccccaaagtgtagtgttgcaggg----ctgtctagcgttcctaggctaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgtaggctgtgagttcaatgtcaaaaatcaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaagct----ta----ttgactgatt------------------------------gataaa-----aatttagtgatcaaaggcttccagga-ccctaaccctgtacttcccc-aggagcaa------------------------------------------------------------------------------------------------tgttcactaattcagtgtttgcaacaat-----atgacataagtactgcagaaaacaagaaacaactgC------GATTGGACTACT-ACCTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13241277 658 + 18905526 AGcagttgatcctcattgtgtgcagatt-tgcatttgtaagtttgtcttcttgctaaaatgta--tgttacttcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaattt--gtta--------cctggagagagagcacattcccagctgaggttgaacaaggtagtgcttttcctgtttgtttccactttcatgctataaacaagtgcacttttaagggtttatttaatgccacatttttcacacttttttgtgtgattttt--ttggtgagtttgccgtttgaa--ttggccccaaagtgtagtgttgcaggg----ctgtctagtgttcctaggctaaagaagacta----tgatatgccttacaaagaaaatacaagtgttagataagcttccttcaggtatgagttacagtgctgtaggctgagagttcaatgtcaaaaatcaatcaacaaaatttattatataaggtg-ccttaaacagaaacactcatgaaccaagct----ta----ttgactgatt------------------------------gataaa-----aatttagtgatcaaaggcttccagga-ccctaaccctgtacttcccc-aggagcaa------------------------------------------------------------------------------------------------tgttcactaattcagtgtttgcaacaat-----atgacataagtactgcagaaaacaagaaacaactgC------GATTGGACTACT-ACCTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60069588 659 - 72318688 AGcagttgatcctcattgtgtgcagatt-tgcatttgtaagtttgtcttcttgctaaaatgta--tgttacttcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaattt--gtta--------cctggagagagagcacgttcccagctgaggttgaacaaggtagtgcttttcctgtttgtttccactttcatgctataaacaagtgcacttttaagggtttatttaatgccacatttttcacacttttttgtgtgattttt--ttggtgagtttgctgtttaaa--ttggccccaaagtgtagtgttggaggg----ctgtctagtgttcctaggctaaagaaggcta----tgatatgccttacaaagaaaatacaagtgttagataagcttcattcaggtatgagttacagtgctgtaggctgtgagttcaatgtcaaaaatcagtcaacagtatttattatataaggtgtctttaaacagaaacactcatgaaccaagct----ta----ttgactgatt------------------------------gataaa-----aatttagtgatcaaaggcttccagga-ccctaaccctgtacttcccc-aggagcga------------------------------------------------------------------------------------------------tgttcactaattcagtgtttgcaacaat-----atgacataagtactgcagaaaacaagaaacaactgC------CATTGGACTACT-ACCTGC i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3503562 662 + 6513552 AGcagttgatcctc---gtgtgcagatt-tgcatttgtaagtttgtcttcttgctaaaatgta--tgttacttcgaaaatcaataatcactgtcaatagtcatttgcagacgtatgcagagtggc-aaaaaatttaagtta--------cctggagagagagcacattcccagctgaggttgaacaaggtagtgcttttcctgtttgtttccactttcatgctataaacaagtacacttttaagggtttatttaatgccacatttttcacactttttcgtgtgattttt--ttggtgagtttgctgtttaaa--ttggtcccaaagtgtagtgttgcaggg----ctgtctagtgttcctaggctaaagaaggcta----tgatatgccttacaaagaaaaaacaagtgttagataagcttcattcagctatgagttacagtgctgtaggctgtgagttcattgtcaaaaatcaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaagct----ta----ttgactgatt------------------------------gataaa-----aatttagtgaccaaaggcttccagga-ccctaaccctgtatttcccc-aggagcaa------------------------------------------------------------------------------------------------tgttcactaattcagtgtttgcaacaat-----atgacataagtactgcagaaaacaagaaacaactgCAAT--TGATTGGACTACT-ACCTGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105271634 679 + 117903854 AAcagttgatccttatggtgtgcagatt-tgcatttgtaaatctgtcttctcgctaacattta--tgttacctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagttac-agaaaatttaagtta--------cttgaaaagagagcacattcccagctgagggtgaacaaggtagtactttgcctgcttgtttccactttcgtgctataaacaagtgtacttttcagggtttatttaatgtcatgtttttcacacttttctgtgtgattttt-----gtgagtttgctgtttgaa--tcggccccaaagtgtagacctacaggg----ctgtctagtgttcctaggctcaagaaggctgtgtgtgatatgccttacaaagaaaatagaagtgttagataaacttgatataggtacgagttacagcactgttggctatgagttcaatgtcgaaaagcaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaaggt----ta----ttgattgatt------------------------------gataaa-----aattcagtgaccaaaggcttccagta-ccctaacactgtatttcc-c-aggagcaat-------------------------------------agagta---------------------------------------------------ttgttcactaattcagtgtttgcaacaatgttatatgacaaaagtactacagaaaacaagaaacaactgTAAT--TGATTGGACTATTCACCTGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19460395 684 - 31320352 AAcagttgatccttacggtgtgcagatt-tgcatttgcaagtttatcttcttgctaatattta--tgttacctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaaattaagtta--------cctgaagatagagcacattcccagctgagggtgaacaaggtagtactttgcctgcttgtttccactttcatgctataaacaagtgtgcttttcagggtttatttaatgccatgtttttcacacttttctgtgtgatttct-gttagtgagtttgctgtttaaa--ttggccccaaagtgtagacctgcaggg----ctgtctagtgtccctaggctcaagaaggctgtctgtgttatgtcttacgaagaaaacacaagtgttagataaacttcatatagataggagttacagcactgttggctgtgagttcaatgttgaaaagcaatcaacaatatttattatataaggtgtctttaaacagaaaccctcatgaaccaaggt----ta----ttgactgatt------------------------------gataaa-----aattcagtgaccaaaggcttccagga-ccctaacactgtatttccac-aggaccaat-------------------------------------agggta---------------------------------------------------ttgtttactaattcagtgtttgcaacaatgttatatcacataaggactgcagaaaacaagaaacaactgTAAT--TGATTGGACTATTCACCTGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1655865 714 + 2203405 AAcagttgatccttacggtgtgcaggtt-tgcatttgtaaatttgtcttcttgctaatattta--tgttacctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggcaaaaaaatttaagtta--------cctgaagggagagcacattcccagctgagggtgaacaaggtagtaatttgcctgcttgtttccactttcatgctataaacaggtatacttttcagggtttatttaatgccatgtttttcacactttcctgtgtgattttg--ttagtgagtttgctgtctaaa--ttggccccaaagtgtagacctgcaggg----ctgtctagtgttcctaggctcaagaaggctgtgtgtgatatgccttacaaagaaaatacaagtgttagataaacttcatataggtatgagttacagcactgttggctgtgagttcaatgtagaagagcaatcaacaatatttattatataaggtgtctttaaatagaaacactcatgaaccaaggt----ta----ttgactgattgacaaaaattcagtgaccaaaggcttccaggacaaa-----aattcagtgaccaaaggcttccagga-ccctaacactgtatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------ttgttcactaattcagtgtttgcaacaatgttatatgacataagtactgcagaaaacaagaaacaactgTAAT--TGATTGGACTATTCACCTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3607846 670 - 14941987 AAcagttgatccttatggtgtgtagatt-tgcatttgtaaatttgtcttcttgctaatattta--tattacctcaaaaatcaataatcactgtcaatggtcatttgcagatatatgcagagtggc-aaaaaatttaagtta--------cctgaagagtgagcacattcccagctaagggtgaacaaggtagtactttgcctgcttgtttctattttcatgctataaacaagtgtacttttcagggtttatttaataccatgtttttcacacttttctgtgtgattttt-gttagtgagtttgctgtttaaa--ttggccccaaagtgtagacctgcaggg----ctgtctagtgttcctaggctcaagaaggctatgtgtgatatgccttacaaagaaaatacaagtgttagataagcttcatacaggtacgagttacagcactgctggctgtgagttcaatgttgaagaccaatcaacaatatttattatataaggtgtctttaaacagaaacactcatgaaccaaggt----ta----ttgactgatg------------------------------gataaa-----atttcagtgaccaaaggcttctgggacccctaacactgtatttcccc-aggagcaat-------------------------------------agggta---------------------------------------------------tcattcactaattcaatgtttgcaacaatgttatatgacataagtactgcagaaaacaagaa-----------------tggactATTCACCTGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11234965 750 - 20685099 CACCgttgatcctcattatctgcaggttctgtactccctaatttgcccacgtactaaaatttg--ttaccccccaa---tccataattattgtgaatggtcatatgtggataaacacagagtagc-agatgatttcggtca--------cccgaca----agcacttccctggctgagggtgaaccaggtggttctctgccctcttctttcagcttttctgtca-------gtgatcttgtctgggtctatgtggtgctctggtggtcgcactttttttggtgactttc--gtggggattttgctgaataaa--atggccccaaagtataatgctgaactg----ctg-----tcttcctaggtacaaagaaagtg----tgatgtgtcttacagagaaaatacgag-gtcagatacactttgttcgggtaggagatacagtgctcgtggccaggaattccatgttgataatgactcaa-aatatttatcgta-----tgtgtttaaaaagaaacacacataatacaagcttaggta----ttgag-gact------------------------------gataaaaacacaatgtagtgactaatggtttccagaa-cccgcattttctatttcccctgggaacaatcttgcagtGGAGATTTATAAATGTGTTTTCTACATTGAAGATAAATCTTTACACGTTTATAGTAAAATCATGTTTTCTAATTTTTCTCTGTTTTTtattcactagttcagtgtctgcaataattttataggccataagtactttgacaaacaagaGACAATGATAAC--TGGTTGGAATATG-ACCTGC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112312957 663 - 122678785 TAcagtcgatccttggcatttgtagat--tgtcttggcaaacttgcctcatccccaaaacttccttggtagcccccaaatcaacaat-aatgacacgtgtcctaggtggataagcacagaggggc-caagaatctgagtcagcctgcctccc----------cccgtgcccagctgaggctcaacagagtggagccatgcc---ttgtctcaggtcccctcctgtaaatgagtgtgctcttcagggtcggttttgtgccagagttttcaca----tttgcggggctttgggttggtgattttgccatttagaatttggaagcaggatgaaa----gaagcg----ctg-------cttctcgacacaagaaggctg----tgatgtacctcacagagaaaat--gagt-tcagagcagctctgtccaggcatcagtttcagagctgttggctatgagttcaacgt-gataatgaattattgatacatgttaaataaggtgtctttaaacagaaatatacataaaacaaggt----tatgggttgattggtt------------------------------ggtaaa-----aatgtagtgaccagaggcccaaagga-acataatcctgtgttttccctaggagtaat-------------------------------------ggggtg---------------------------------------------------gtatccactaattcagtgtttgtattaagcttataaaatatgactcccgtgataaagaagaaacagctgTAATTATAACTGTA--ATT-ATCTGC i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1265398 1120 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e manLeu1.NW_012106698v1 406442 871 - 1517660 I a score=1534739.000000 s hg38.chr18_GL383571v1_alt 140392 150 + 198278 CTAATGCAGTGGATTTC---CCTCCA------CTACATAGTGGAATCCCCTGGAGGGTGAGCATTTTA-AAAATGCAGATGCTGGTTACCCATTTTACCCTC----CCCCCAGGCCACGGAAATCTGAATCTGTGGAG----GT------CTCTGCTTTG--ATGTTTTTAAAATC-- s panTro5.chr18 65050410 150 + 78221452 CTAATGcagtggatttc---cctcca------ctacacagtggaatcccctggaggatgagcacttta-aaaatgcagatgctggttacccattttaccctc----cccccaggccatggaaatctgaatctgtggag----gt------ctctgctttg--atgtttttaaaatc-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64169479 150 + 77229886 CTAATGcagtggatttc---cctcca------ctacatagtggaatcccctggaggatgagcacttta-aaaatgcagatgctggttacccattttaccctc----cccccaggccatggaaatctgaatctgtggag----gt------ctctgctttg--atgtttttaaaatc-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5388983 149 + 17472758 CTAATGcagtggatttc---cctgca------ctacacagtggaatcccctggagggtgagcatttta-aaaatgcagatgctggttacccattttaccgt-----cccccaggccatggaaatctgaatctgtggag----gt------ctctgctttg--atgtttttaaaatc-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139429128 150 - 152096393 CTAATGcagtggatttc---cctgca------ctacacagtagaaacccctgaagggtgagcatttaa-aaaatgcagatgctggttacccattttaccctc----cccccaggccatggaaatctgaatctgtggag----gt------ctctgctttg--atgtttttaaaatc-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57379501 152 + 70235451 CTAATGTagtggattcc---cctcca------ctacacagtggaatcccctgga--ttgagcatttaa-aaaatgcagatgctggttacccattttacccccgccacccccaagccacggaaatctgaatctgtggag----gt------ctctgctttg--atggttttgaaatc-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63070907 152 - 75711847 CTAATGTagtggattcc---cctcca------ctacacagtggaatcccctgga--ttgagcatttaa-aaaatgcagatgctggttacccaTTTTACCCCCGCCACCCCCAAGCCACGGAAATCTGAATCTGTGGAG----GT------CTCTGCTTTG--ATGGTTTTGAAATC-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13630122 152 - 18804593 CTAATGTagtggattcc---cctcca------ctacacagtggaatcccctgga--ttgagcatttaa-aaactgcagatgctggttacccattttacccccgccacccccaagccacggaaatctgaatctgtggag----gt------ctctgctttg--atggttttgaaatc-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13241935 152 + 18905526 CTAATGcagtggatttc---cctcca------ctacacagtggaatcccccgga--ttgagcatttaa-aaaatgcagatgctggttacccattttacccccaccacccccaagccacggaaatctgaatctgtggag----gt------ctctgctttg--atggttttgaaatc-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60070247 154 - 72318688 CTAATGTagtggatttc---ccttca------ctacacagtggaatcccctggagggtgagcatttaa-aaaatgcagatgctggttacccattttacccccGCCACCCCCAAGCCACGGAAATCTGAATCTGTGGAG----GT------CTCTGCTTTG--ATGGTTTTGAAATC-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 407313 154 - 1517660 CTAATGcagtggatttc---cctcca------ctacacagtggaatcccctggagggtgaacatttaa-aaaatgcagatgctggttacccattttacccccgccacccccaagccacggaaatctgaatctgtggag----gt------ctctgctttg--atggttttgaaatc-- i manLeu1.NW_012106698v1 I 871 C 0 s colAng1.NW_012115433v1 3504224 153 + 6513552 -CTATGcagtggatttc---cctaca------ctacacagtggaatcccctggaaggtgagcatttaa-aaaatgcagatgctggttacccaTTTTACCCCTGCCACCCCCAAGCCACGGAAATCTGAATCTGTGGAG----GT------CTCTGCTTTG--ATGGTTTTAAAATC-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105272313 151 + 117903854 CTAATGcagtggatttc---cctcca------ctacacagtggaatcccttggagggtgagcatttta-aaaatgcagatgctggtaacccattttaccctct---cctccaggccatggaaatctgaatccttggag----gt------gtctgctttg--atgtttttaacaac-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19461079 149 - 31320352 CTAATGcagtggatttc---cctcca------tg--acagtggaatcccttggagggtgagcatttaa-aaaacgcagatgctggtaacccattttaccctct---cctccaggccatggaaatctgaatctgtggag----gt------atctgctttg--atgtttttaacaac-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1656579 151 + 2203405 CTAATGcagtggatttc---cctcca------ctacatagtggaatcccttggagggtgagcatttaa-aaaatgcagatgctggtaatccattttaccgtct---cctccaggccatggaaatctgaatctgtggag----at------gtctgctttg--atgtttttaacaac-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3608516 151 - 14941987 CTAATGcagtggatttc---cctcca------ctacacagtggaatcctttggagggtgagcatttaa-aaaatgcagatgctggtaacccattttaccctct---cctccaggccatggaaatctgaatctgtggag----gt------gtctgctttc--atgtttttaacaac-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11235715 143 - 20685099 CTAAGGCAGTGG----C---CCTCCACCATGGCTACAGAATGG-ATCCCCTGATGGGTGAGCATTTAA-GAAATGCAGAGACCAGGGAGC----------------AGGCCAGGGCATGAAAACCTCCATCTGGAGGGTGATGC------CTCTGCTGAG--CTGGTTTTTAATTG-- i otoGar3.GL873546 C 0 I 3 s canFam3.chr1 112313620 152 - 122678785 TTAATTcagtagatctcaatctttgg------ctacacagtggaatcccctggagggagagcattttgtaaaatatagatacctCAAATc----------------attccaggccaagggaaaatgaacctggggag----gttaaagcctctgcgctgctatgtttttaaattttc i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1265398 1120 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=2367696.000000 s hg38.chr18_GL383571v1_alt 140542 197 + 198278 TCAAGTAATTCCAGAAATTCTTCTTTTCTAC--AAATTATACCTCAAGAAAGTGGAAGTTGTTGATTAACAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcaatgatgatttcagctctac-tagccttctttgctcatgaggCAATTTTGAAAATG s panTro5.chr18 65050560 194 + 78221452 tcaagtaattccaGAAATTCTTCTTTTCTAC-AAAATTATACCTCAAGAAAGTGGAAGTTGTTGAATAACAAGCTCTTTTC---------------GAAGAGAACATCATCTGGGATGTTG--CTCTTCTCTCCTTCCTTCCAGCTTCCTGGAACGCAGCAATGATGATTTCAGCTCCAC-TAGC---CTTTGCTCATGAGGCAATTTTGAAAATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64169629 194 + 77229886 tcaagtaatttcaGAAATTCTTCTTTTCTAC-AAAATTATACCTCAAGAAAGTGGAAGTTGTTGATTAACAGGCTCTTTTC---------------GAAGAGAACATCATCTGGGATGTTG--CTCTTCTCTCCTTCCTTCCAGCTTCCTGGAACGCAGCAATGATGATTTCAGCTCCAC-TAGC---CTTTGCTCATGAGGCAATTTTGAAAATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5389132 198 + 17472758 tcaagtaattccaGAAATTCTTCTTTTCTAC-AAAATTATACCTCAAGAAAGTGGAAGTTGTTGATTAACAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcaatgatgatttcagccttac-tagccttctttgctcatgaggCAATTTTGAAAATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139429278 198 - 152096393 tcaagtaattccaGAAATTCTTCTTTTCTAC-ATAATTATACCTCAAGAAAGTGGAAGTTGTTGATTAAAAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcaatgatgatttcagctctac-tagccttctttgctcatgaggCAATTTTGAAAATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57379653 198 + 70235451 tcaagtaattccaGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAATGGAAGTTGTTGATTGAAAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcagtgatgatttcagctctac-tagccttccttgctcatgaggCAATCTTGAAAATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63071059 198 - 75711847 TCAAGTAATTCCAGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAATGGAAGTTGTTGATTGAAAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcagtgatgatttcagctctac-tagccttccttgctcatgaggCAATCTTGAAAATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13630274 198 - 18804593 tcaagtaattccaGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAATGGAAGTTGTTGATTGAAAGGCTCTTTTC--------------CGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcagtgatgatttcagctctac-tagccttccttgctcatgaggCAATCTTGAAAATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13242087 198 + 18905526 tcaagtaattccaGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAATGGAAGTTGTTGATTGAAAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcagtgatgatttcagctctac-tagccttccttgctcatgaggCAATCTTGAAAATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60070401 198 - 72318688 TCAAGTAATTCCAGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAATGGAAGTTGTTGATGGAAAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttcattccagcttcctggaatgcagcagtgatgatttcagctctac-tagccttccttgctcatgaggCAATCTTGAAAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 407467 198 - 1517660 tcaagtaattccaGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAATGGAAGCTGTTGATTGAAAGGCTCTTTTC--------------AGAAGAGAACATCATCTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcagtgatgatttcagctctac-tagccttccttgctcatgaggCAATCTTGAAAATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3504377 198 + 6513552 TCAAGAAATTCCAGAAATTTTTCTTTTCTAC-AAAATTATACCTCAAGAAAGTGGAAGTTGTTGATTGAAAGGCTCTTTTC--------------AGAAGAGAACATCATTTgggatgttg--ctcttctctccttccttccagcttcctggaatgcagcaatgatgatttcagctctat-tagcctcctttgctcatgaggCAATCTTGAAAATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105272464 195 + 117903854 tcaagtaattgcaGAAA---TTCTTTTCTAC-AAAATTATACCTCAAGAAAGTGGAAGTTGTTGGTTGAAAGGCGCTTTTC--------------AGAAGAAAAAGTCCTCTGGGATGCTG--CTCTGCTCTTCTTCCTTCAAACTTCTTGGAATGCAGCAATGATGATTTGAGCTCTCT-GAGCCTTCGGTGCTCAGGAAGCAATTTTGAAAATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19461228 190 - 31320352 tcaagtaattccaGAAA---TTCTTTTCTAC-AAAATTATACCTCAAGAAAGTGGAA---GTTGGTTGAAAGGCTCTTTTC--------------AGAAGAGAAAGTC--CTGGGATGTTG--TTCTTCTCTTCTTCCTTCCAACTTCCTGAAATGCAGCAATGATGATTTGAGCTCTCC-TAGCCTTCTGTGCTCACGAGGCAATTTTGAAAATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1656730 195 + 2203405 tcaagtaattccaGAAA---TTCTTTCCTAC-AAAATTATACCTTAAGAAAGTGGAAGTTGTTGGTTGAAAGGCTCTTTTC--------------AGAAGAGAAAGTCCTCTGGGATGttg--ttcttctcttcttccttccaacttcctggaatgcagcaatgatgatttgagctctcc-tagccttctgtgctcatgaggCAATTTTGAAAATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3608667 195 - 14941987 tcaagtaattccaGAAA---TTCCTTTCTAC-AAAATTATACCTCAAGAAAGTGGAAGCTGTTGGTTGAAAGGCTCTTTTC--------------AGAAAAG--AGTCATCTGGGATGTTGCTCTCTTCTCTTCTTCCTTCCAACTCCCTGGAATGCAGCAATGATGATTTGAGCTATCC-TAGCCTTCTGTGCTTACGAGGCAATTTTGAAAATA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1266518 200 - 1406956 TCAAGTAATTCCAAAAATTTTTCTTTTCTACCAAAATTATAACTCAAAAAAGTAGAAGCTGTTGATTGGAAGGCTCTTTTC--------------AGAAGAGGACACCAGCTgggatgttg--ctcttccctctttcctcccagctccctggaatgcagcaatggtggcttgagctttacttagccatcttggttcatgaagCAATCTTGAAAATG i proCoq1.NW_012148742v1 I 1120 C 0 s otoGar3.GL873546 11235861 198 - 20685099 TCCTGTAAGTCCATACTTTTTTCTTTCCTACTAACCTTTTGATTCGGCAAAGTAGAAG-TGTTGGTTGGAGGACTTTTTTC--------------AGAAGAGGACAGCAGCTGGGATGTGG--CCCTATCCTCCTTCCTCTCGGTACCCTGGAATCCAACAATGGTGACGTGAACTTTAC-TAACCATCTTGGTTCATGAGGCTCTCGTGAAAATG i otoGar3.GL873546 I 3 C 0 s canFam3.chr1 112313772 182 - 122678785 ccaagtaattccaGAAATTGTTATTTTCTACCAAAATTACAGCTCAGAAAAGTGGAAGCTGTTGGATGCAAGGCTCTTTTTGTAAAGACCTTTTAGGATGAAGACATCAGGGGGGATGTTT--ATCTTCTTTTC-------------------------------TGAACTGAGCTCTCC-TACCCTTCTTGGCTCATGATGCCATCTTGAAAATG i canFam3.chr1 C 0 I 6635 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=1965309.000000 s hg38.chr18_GL383571v1_alt 140739 189 + 198278 AC-AAAAACTAGTTTATTTAGTTtatcttaccagctagtac-----ctcaattccaacaatcttggatgccac---gattt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatctcttatttttttttt-cttctgtcatctcact s panTro5.chr18 65050754 189 + 78221452 AC-AAAAACTAGTTTATTTAGTTtatcttaccagctagtac-----ctcaattccaacaatcttggatgccac---gattt-aaaatcc-cttttacagtgcttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatctcttatttttttttt-cttctgtcatctcact i panTro5.chr18 C 0 C 0 s panPan2.chr18 64169823 188 + 77229886 AC-AAAAACTAGTTTATTTAGTTtatcttaccagctagtac-----ctcaattccaacaatcttggatgccac---gattt-aaaatcc-cttttacagtgcttcctaagcctcatattctcac-agccactttaccctctat-aatcagtcccttgcatgcaaccttatctctta-ttttttttt-cttctgtcatctcact i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5389330 189 + 17472758 AC-AAATACTAGTTTATTTAGTTtatcttaccagctagtac-----ctcaattccaacaatcttggatgccac---gattt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatctcttatttttttttt-cttctgtcatctcact i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139429476 189 - 152096393 AC-AAAAACTAGTTTATTTAGTTtatcttaccagctagtac-----ctcaattccaacaatcttggatgccac---gattt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctccat-aatcagtcccttgcaagcaaccttatctcttttttttttttt-cttctgtcatctcact i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57379851 189 + 70235451 AC-AAAAACTAGTTTATTTAATTtatcttaccagctagtac-----ctcaattccaacaatgttggatgccac---gatgt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatcttttttttttttctt-cttctgtcatctcact i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63071257 189 - 75711847 AC-AAAAACTAGTTTATTTAATTTATCTTACCAGctagtac-----ctcaattccaacaatgttggatgccac---gatgt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatcttttttttttttctt-cttctgtcatctcact i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13630472 189 - 18804593 AC-AAAAACTAGTTTATTTAATTtatcttaccagctagtac-----ctcaattccaacaatgttggatgccac---gatgt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatcttttttttttttttt-cttctgtcatctcact i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13242285 189 + 18905526 AC-AAAAACTAGTTTATTTAATTtatcttaccagctagtgc-----ctcaattccaacaatgttggatgccac---gatgtaaaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtaccttgcatgcaaccttatctttttttttttt-tt-cttctgtcatctcact i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60070599 190 - 72318688 AC-AAAAACTAGTTTATTTAATTTATCTTACCAGctagtac-----ctcaattccaacaatgttggatgccac---gatgt-aaaatcc-cttttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcatgcaaccttatcttttttttttttttttcttctgtcatctcact i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 407665 188 - 1517660 AC-AAAAACTAGTTTATTTAATTtatcttaccagctagtac-----ctcaattccaacaatgttggatgccac---gatgt-aaaatcc-cctttacagtgtttcctaagcctcatattctcat-agccactttaccctctat-aatcagtcccttgcgtgcaaccttatcttttttttttttttg--ttctgtcatctcact i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3504575 188 + 6513552 ACAAAAAACTAGTTTATTTAATTTATGTTACCAGCTAATAC-----CTCAATTCTAACAATGGTGGATGCCAC---GATGT-AAAATCC-CTTTTAAAGTGTTTCCTAAGCCTCGTattctcat-agccactttatcctctat-aatcagtcccttgcatgcaaccttatcttttttttttttc---cttctatcttctcact i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105272659 188 + 117903854 AC-AATAACTGatttattcagtttatcttaccagctagtac-----ctccaatccaactgtctcggatggcaccagaatct-aaaatcc-cttttacagtgtttcctaagcctcatatcctcataagtc----tatactctat-aatcagtcccttgcatgcaacattatctct-atttttttttt-cttctgtcatctcgtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19461418 193 - 31320352 AC-AATAACTGatttattcagtttatcttaccagctagtac-----ctccaatccaacagtcttggaagccaccagaatct-aaaatcc-cttttacagtgtttcctaagcctcatattctcacaagtcactttaccctcaat-aaacagtcctttgcatgcaacattatctctaatttttttttt-cttctgtcatcttgct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1656925 190 + 2203405 AC-AATAACTGATTTATTCAGTTAATCTTACCAGCGagtac-----ctcctatccaacagtcttggatgccaccagaatct-aaaatcc-cttttacagtgtttcctaagcctc--attctcataagtcactttaccctctat-aatcagtcccttgcatgcaacattatctct-atttttttttt-cttctgtcatctcgct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3608862 192 - 14941987 AC-AATAACTGGTTTATTTAGTTAATCTTACCAGctagtac-----ctccaatccaacagtcttggatgccaccagaatct-aaaatcc-cttttatagtgtttcctaagcctcatattctcataagtcactttaccctctat-aatcagtcccttgcatgcaatattatctctactttttttttt-tttctgtcatctt-ct i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1266718 191 - 1406956 AC-AAGCACTAAATAGTTTAGTTtgtcttaccagctcgtac-----ctttgctccaacaatctttgatgccacatgaatct-aaaatcctttttaacagtgtttcctaagactcattttcttataagcctcttcatcctctac-aatcagtccctggcattcaatctca--ctttatata-ttttt-cttctgttatctcact i proCoq1.NW_012148742v1 C 0 I 28 s otoGar3.GL873546 11236059 177 - 20685099 AG-AAGCTATAAATCGT----------TTACCAGCTAGTAtagtaactccactccaacaatcctggatgccacatggatct-aatatcc----taacagtgttgcttaatcctcatttcatcatgagcctcattgccctctacgaatgaatccctagcatttcacctcg-----tatatatttttt-cttctgtcatcc---- i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=352201.000000 s hg38.chr18_GL383571v1_alt 140928 32 + 198278 cactcctggggaaaacacaatctggctaatct s panTro5.chr18 65050943 32 + 78221452 cactcctggggaaaacacaatctggctaatct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64170011 32 + 77229886 cactcctggggaaaacacaatctggctaatct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5389519 32 + 17472758 cactcctggggaaaacacaatctggctaatct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139429665 32 - 152096393 cactcctggggaaaacataatctggctaatct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57380040 32 + 70235451 cactccgagggaaaacacaatctggctaatct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63071446 32 - 75711847 cactcctagggaaaacacaatctggctaatct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13630661 32 - 18804593 cactcctagggaaaacacaatctggctaatct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13242474 32 + 18905526 cactcctagggaaaacacaatctggctaatct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60070789 32 - 72318688 cactcctagggaaaacacaatctggctaatct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 407853 32 - 1517660 cactcctagggaaaacacaatctggctaatct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3504763 32 + 6513552 cactcctggggaaaacacaatctggccaatct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105272847 32 + 117903854 cacccctggggaaaacacaatctggccaatct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19461611 32 - 31320352 gactcctggggaaaacacaatctgggcaatct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1657115 32 + 2203405 cactcctgggaaaaacacaatctggccaatat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3609054 32 - 14941987 cactcctggggaaaacacaatctggccaatct i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11236236 32 - 20685099 cattcctggaaaaaatgcaatcatgtccctct i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1266909 28 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=3919596.000000 s hg38.chr18_GL383571v1_alt 140960 379 + 198278 agctttccatttttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcaggtttcttacagaacgtgaacagccattactttc-aagaaggccattagagctgtctagcaatggtacaaaatttcccctctccataccctttactctttcactcttctagatgactat-----ttttatacctccttttctcttatccagcctccaagacttctttccc-catcttttttctcatctattgattctgctttctatttcattg-agaaaacagaagtagtaaaaagagttaagtagaataatatattcaaaatgctgtaaacctaggactg-t------atgtacagccaacttacgttgcaagaatgaatgtcataaaaagaca-- s panTro5.chr18 65050975 379 + 78221452 agctttccatttttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcaggtttcttacagaacgtgaacagccattactttc-aagaaggccattagagctgtctagcaatggtacaaaatttcccctctccataccctttactctttcactcttctagatgactat-----ttttatacctccttttctcttatccagcctccaagacttctttccc-catcttttttctcatctgttgattctgctttctatttcattg-agaaaacagaagtagtaaaaagaggtaagtagaataatatattcaaaatgctgtaaacctaggactg-t------atgtacagccaacttacgatgcaagaatgaatgtcataaaaagaca-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64170043 379 + 77229886 agctttccatttttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcaggtttcttacagaacgtgaacagccattactttc-aagaaggccattagagctgtctagcaatggtacaaaatttcccctctccataccctttactctttcactcttctagatgcctat-----ttttatacctccttttctcttatccagcctccaagacttatttccc-catcttttttctcatctgttgattctgctttctatttcattg-agaaaacagaagtagtaaaaagaggtaagtagaataatatattcaaaatgctgtaaacctaggactg-t------atgtacagccaacttacgatgcaagaatgaatgtcataaaaagaca-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5389551 375 + 17472758 agctttcca-ttttttctaca-ttgcatgtgtgcagctgaacagagctggggtaaa-caggtttcttacagaacgtgaacagccattactttc-aagaaggccattagagctgtctagcaatggtacaaaagttcctctctccataccctttactctttcactcttctagatgactat-----ttttatacctccttttctcttatccagcctccaagac-tctttccc-catcttttttctcatctgttgattctgctttctatttcattg-agaaaacagaagtagtaaaaagaggtaagtagaataatatattcaaaatgctgtaaacctaggactg-t------atgtacagccaacttaagttgcaagaatgaatgtcataaaaagaca-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139429697 375 - 152096393 agcttcccatttttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcaggtttcttacataaagtgaacagccattactttc-aagaaggccattagagctgtctagcaatggtacaaaatttcccctctccatatcctttactctttcactcttctagatgactat-----ttttatatctccttttctcttatccagcctccaaaacttctttccc-catcttttttctcatctattgattctgcttcctatttcattg-agaaaacagaagtagtaaaaagaggtaagtagaataatatattcaaaatgctgtaaacctaggac-----------tgtacagccaacttatgttgcaagaatgaatgtcacaaaaagaca-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57380072 376 + 70235451 agctttcca--tttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcagttttcttacattaagtgaacagccattactttc-aagaaggccattagaactgtctgacaatggtacaaaatttcccctctccataccttttactctcttactctcctagatgacta------ttttatacctcgttttctcttctctagcctccaagacctcttcccc-catcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagaTAagtagaataatatattcaaaatgctgtaaaccttggactg-t------aggtacagccaacttaccttgcaagaatgaatgtcgtaaaaagaca-- i rheMac8.chr18 C 0 I 2 s macFas5.chr18 63071478 376 - 75711847 agctttccg--tttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcagttttcttacattaagtgaacagccattactttc-aagaaggccattagaactgtctgacaatggtacaaaatttcccctctccataccttttactctcttactctcctagatgacta------ttttatacctcgttttctcttctctagcctccaagacctcttcccc-catcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagaTAagtagaataatatattcaaaatgctgtaaaccttggactg-t------aggtacagccaacttaccttgcaagaatgaatgtcgtaaaaagaca-- i macFas5.chr18 C 0 I 2 s macNem1.NW_012016688v1 13630693 376 - 18804593 agctttccg--tttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcagttttcttacattaagtgaacagccattactttc-aagaaggccattagaactgtctgacaatggtacaaaatttcccctctccataccttttactctcttactctcctagatgacta------ttttatacctcgttttctcttctctagcctccaagacctcttcccc-catcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagaTAagtagaataatatattcaaaatgctgtaaaccttggactg-t------aggtacagccaacttaccttgcaagaatgaatgtcgtaaaaagaca-- i macNem1.NW_012016688v1 C 0 I 2 s cerAty1.NW_012001075v1 13242506 376 + 18905526 agctttccg--tttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcagttttcttatattaagtgaacagccattactttc-aagaaggccattagaactgtctggcaatggtacaaaatttcccctctccataccttttactctcttactctcctagatgacta------ttttatacctccttttctcttctctagcctccaagacctcttcccc-catcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagataagtagaataatatattcaaaatgctgtaaacctaggactg-t------aggtacagccaacttaccttgcaagaatgaatgtcgtaaaaagaca-- i cerAty1.NW_012001075v1 C 0 I 2 s chlSab2.chr18 60070821 376 - 72318688 agctttccg--tttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcagttttcttaaattaagcgaacagccattactttc-aagaaggccattagaactgtctggcaatggtacaaaatttcccctctccataccttttactctcttactctcctagatgacta------ttttatacctccttttctcttctctagcctccaagacctctttccc-catcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagaTAagtagaataatatattcaaaatgctgtaaacctaggactg-t------aggtacagccaacttaccttgcaagaatgaatgtcgtaaaaagata-- i chlSab2.chr18 C 0 I 2 s manLeu1.NW_012106698v1 407885 376 - 1517660 agctttccg--tttttctacacttgcatgtgtgcagctgaacagagctggggtaaagcagttttcttacattaagtgaacagccattactttc-aagaaggccattagaactgtctggcaatggtacaaaatttcccctctccataccttttactctcttactctcctagatgacta------ttttgtacctccttttctcttctctagcctccaagacctcttcccc-cttcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagaTAagtagaataatatattcaaaatgctataaacctaggactg-t------aggtacagccaacttaccttgcaagaataaatgtcgtaaaaagaca-- i manLeu1.NW_012106698v1 C 0 I 2 s colAng1.NW_012115433v1 3504795 377 + 6513552 agctttcca-ttttttctacacttgcatgtgtacagctgaacagagctggggtaaagcagttttcttacattaagtgaacagccattactttc-aagaaagccatttgaactgtctggcaatggtgcaaaatttcccctctccatagcctttaccctcttactctcctagatgacta------ttttatacctacttttctcttctctagcctccaagacttcttcctc-catcttttttctcatctattgattctgcttcctatttcattg-aggaaacagaagtagtaaaaagagaTAAGTAGAATAATATATTCAAAATGCTGTAAACCTAGGACTG-T------ATGTACAGCCAACTTACCTTGCAAGAATGAATGTCATAAAAAGACA-- i colAng1.NW_012115433v1 C 0 I 12 s calJac3.chr13 105272879 351 + 117903854 agct------------------------------agctgaacagagctgagataaaccaggtttcttacattaagtgaacagccattacttc--aagaaggtcattagagctgtctagcaatggtacaatatttcccctttccatcccctttactcttgcactctcctagatgactatgcctattttatacctccttttttcttctc-agcctccaagacctcttcccc-catcttttttctcatctactg-ttctgcttcctatttcactg-aaaaaacgaaagtagtaaaaagagGTAAGTTGAATAACATATTaaaagggctgtaaacctaggactg-t------atgtacagccaacttacctttcaagaatgaatgttataaaaagaca-- i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19461643 344 - 31320352 aact----------------------------------------agctgaggtaaaccaggtttcttacattaagtgaacagccattactttcaaagaaggccattacagctgtctagcaatggtacaaaattcccactcctcatcccccttactctc-tgctctcctaaatgactatgcctactttatacctccttttctcttctc-cgcctccaagacctcttcccc-catcttttttctcatcgactg-ttctgcctcttatttcactgaaaaaaacggaagtagtaaaaagagGTAAGTTGAATAATATATgaaaagggctataaacctaggactgtt------atgtacagccaacttaccttgcaagaatgaatgtcataaaaagaca-- i saiBol1.JH378121 C 0 I 2 s cebCap1.NW_016107689v1 1657147 351 + 2203405 agct------------------------------agctgaacagagctgaggtaaaccaggtttcttacatttagtgaacagccattactttc-aagaaggccattagagctgtctagcaatggtacaaaatttccactcttcatccccttcactctctcactctcctaaatgactatgcctattgtatacctccttttctcttctc-agcctccaagacctcttcccc-catcttttttctcatctactg-ttctgattcctatttcactg-aaaaaacggaagtagtaaaaagagGTAAGTTGAATAGTATATTaaaagcactgtaaa-ctaggactg-t------atgtacagccaacttaccttgcaagaatgaatgtcataaaaagaca-- i cebCap1.NW_016107689v1 C 0 I 2 s aotNan1.NW_018502140v1 3609086 352 - 14941987 agct------------------------------agctgaacagagctgaggtaaaccaggttccttacattaagtgaacagtcattactttc-aagaaggccattagagctgtctagcaacggtacaaaatttcccctcttcatcccctttactctctcaatctcctagatgactatgcctattttatacctccttttctcttctc-agcctccaagacctcttcccc-catcttttttctcatctattg-ttctgcttcttatttcactg-aaaaaacagaagtagtaaaaagaggtaagttgaataatatattaaaagggctgtaaacctaggactg-t------atgtacagtcaacttaccttgcaagaatgaatgtcataaaaagaca-- i aotNan1.NW_018502140v1 C 0 I 2 s proCoq1.NW_012148742v1 1266937 371 - 1406956 agctttcca-tattttctacatttgcacaggtgcagctgaacagagctgggggaaaccaggtctcttactttacatgcccagctattaccttc-aaggaggccattagagctgtgcagcaatggtac---atttccccgctccatctcctttattccctcactctcccacatgacta------ttttataccttcttttctgtcctccaacctccaagacctcatcccc-----ttttttctccactgttgacttggcttcctatttcactg-agaaaacagaagtagtcaaaatagaTAAGTAGAATAATGTATTCAAAGTGTTGTTAACCTAAAATTG-T------ATATATAGAAAACTTACCTTGCAAGAATAAATGCCAT-AAAAGACAAA i proCoq1.NW_012148742v1 I 28 C 0 s otoGar3.GL873546 11236268 343 - 20685099 -----------attttccacacctgcatagatgcagctgagcaaagctaggggaaaccgggtctcttacttcacatgcacagcaa------aa-aagcaggtcgtcagagctgtgcagcgacagtac---attctccttcttcagctcctttattttctcact-tcctagatgactg------ttttatac---cttttctctcctcca---------ctctcatcccccaattttttttctcagctgttgacttcacttcctatttcattg-agaaaacagaagtaatcaaaagagGTAAGTAGAATAATGTATTCAAAGTGCTATTAACCTAAAACTG-TATACACATATATAGCAAAATAATCTTGCAAGAATAAGTG-----------CATA i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=3727613.000000 s hg38.chr18_GL383571v1_alt 141339 427 + 198278 ttttaggcaaacaaaaattgagaaaatattaaagatgcacttaaggcag---aaaaaaatgagcacagaataaaggcttgagcagtttgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatagtggttgtataaaagagtaataatCACTTTTCATTTTTCTCTAAtaagccctgaaataatagaaataggatgcattgcttc---------tagtaaaaggaagggaggcattaatcatctcaaaataattcaaaacag----aagttgaaaaggaatatat--------taatag---------------------------------------ttaaaagaggtatagacagaaagtacatgctaat------tat---aaataaatccatgaatatcaataat---------cac-atggatat---------aaacactccagataaaagacaatgattcttagaatatcagt-aaaatccagctatcttctatttacagt s panTro5.chr18 65051354 431 + 78221452 ttttaggcaaacaaaaattgagaaaatattaaagatgcacctaaggcag---aaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatagtggttgtataaaagagtaataatCACTTTTCATTTTTCTCTAAtaagccctgaaataatagaaataggatgcattgcttc---------tagtaaaaggaagggaggcattaatcatctcaaaataattcaaaacagaagtaagttgaaaaggaatatat--------taatag---------------------------------------ttaaaagagatatagacagaaagtacatgctaat------tat---aaataaatccatgcatattaataat---------cac-atggatat---------aaacactccagataaaagacagtgattgttagaatatcagt-aaaatccagctatcttctatttacagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64170422 431 + 77229886 ttttaggcaaacaaaaattgagaaaatattaaagatgcacctaaggcag---aaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatagtggttgtataaaagagtaataatCACTTTTCATTTTTCTCTAAtaagccctgaaataatagaaataggatgcattgcttc---------tagtaaaaggaagggaggcattaatcatctcaaaataattcaaaacagaagtaagttgaaaaggaatatat--------taatag---------------------------------------ttaaaagagatatagacagaaagtacatgctaat------tat---aaataaatccatgcatattaataat---------cac-atggatat---------aaacactccagataaaagacagtgattgttagaatatcagt-aaaatccagctatcttctatttacagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5389926 431 + 17472758 ttttaggcaaacaaaaattgagaaaatattaaagatgcacttaaggcag---aaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatagtggttgtataaaagagtaataatCACTATTCATTTTTCTCTAAtaagccctgaaataatagaaataggatgcattgcttc---------tagtaaaaggaagggaggcattaatcatctcaaaataattcaaaacagaagtaagttgaaaaggaatatat--------taatag---------------------------------------ttaaaagaggtatagacagaaagtacatgctaat------tat---aaataaatccatgcatatcaataat---------cac-atggatat---------aaacactccagataaaagacaatgattgttagaatatcagt-aaaatccagctgtcttctatttacagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430072 425 - 152096393 ttttaggcaaataaaaattgagaaaatattaaagatgcacttaaggtag----aaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatactggttgtataaaagagtaataatcacttttaatttTTCTTTAAtaagccctgaaataatagaaataggatgcattgcttt---------tagtaaaaggaagggaggcattaatcatctcaaaataattcagaacag----aagttgaaaaggaatatat--------taatag---------------------------------------ttaaaagaggtatagacagaaagtacatactaat------tat---aaataaatccatgcatatcaataat---------cac-atggatat---------aaacactcca-ataaaagacaatgattgttagaatgtcagt-aaaatccagctatcttctatatacagt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57380450 415 + 70235451 ttttaggccaacaaaaattgagaaaatattaaagatgcatttaaggcag---aaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatactggatatataaaagagtaataatCACTTTTCATTTTTCTATAATAAGCCCTGAAATAATAGATACAGGATGCATTGCTTT---------TAATAAAAGGAAGGGAGGCATTAATCATCTCAAAATAATTCAAAAAAGAAGTAAACTGAAAAAGAATATAT--------TAATAG---------------------------------------TTAAAAGAAGTATAGACAGAAAGTGCATACTAAT------TAT---AAATAAATCCATGCATATCA------------------------AT---------AAACACTCCAGATAAAAGACAATG---ATTAGAATGTCAGTAAAAATCCAGCTATCTTCTATTTACAGT i rheMac8.chr18 I 2 C 0 s macFas5.chr18 63071856 415 - 75711847 ttttaggccaacaaaaattgagaaaatattaaagatgcatttaaggcag---aaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatactggatatataaaagagtaataatCACTTTTCATTTTTCTACAAtaagccctgaaataatagatacaggatgcattgcttt---------taataaaaggaagggaggcattaatcatctcaaaataattcaaaaaagaagtaaactgaaaaagaatatat--------taatag---------------------------------------ttaaaagaagtatagacagaaagtgcatactaat------tat---aaataaatccatgcatatca------------------------at---------aaacactccagataaaagacaatg---attagaatgtcagtaaaaatccagctatcttctatttacagt i macFas5.chr18 I 2 C 0 s macNem1.NW_012016688v1 13631071 415 - 18804593 ttttaggccaacaaaaattgagaaaatATTAAAGATGCATTTAAGGCAG---AAAAAAATGAGCACAGAATAAAGGCTTGAGCAGTGTGATGGTACAGAAAGA-AAAACATAAACATACGAATAAATATA------C--AAATACTGGATATATAAAAGAGTAATAATCACTTTTCATTTTTCTATAATAAGCCCTGAAATAATAGATACAGGATGCATTGCTTT---------TAATAAAAGGAAGGGAGGCATTAATCATCTCAAAATAATTCAAAAAAGAAGTAAACTGAAAAAGAATATAT--------TAATAG---------------------------------------TTAAAAGAAGTATAGACAGAAAGTGCATACTAAT------TAT---AAATAAATCCATGCATATCA------------------------AT---------AAACACTCCAGATAAAAGACAATG---ATTAGAATGTCAGTAAAAATCCAGCTATCTTCTATTTACAGT i macNem1.NW_012016688v1 I 2 C 0 s cerAty1.NW_012001075v1 13242884 419 + 18905526 ttttaggcaaacaaaaattgagaaaatattaaagatgcatttaaggaag--aaaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatactggatgtataaaagagtaataatCACTTTTCATTTTTCTATAATAAGCCCTGAAATAATAGATATAGGATGCATTGCTTT---------TAATAAAAGGAAGGGAGGCATTAATCATCTCAAAATAATTCAAAAAAGAAGTAAACTGAAAAAGAATATAT--------TAATAG---------------------------------------TTAAAAGAAGTATAGACAGAAAGTACATACTAAT------TAT---AAATAAATCCATGCATATCA------------------------AT---------AAACACTCCAGATAAAAGAAAATGATTATTAGAATGTCAGTAAAAATCCAGCTATCTTCTATTTACAGT i cerAty1.NW_012001075v1 I 2 C 0 s chlSab2.chr18 60071199 419 - 72318688 ttttaggcaaacaaaaattgagaaaatattaaagatgcatttaaggcag--aaaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaataaatata------c--aaatactggatgtataaaagagtaataatCACTTTTCATTTTTCTATAAtaagccctgaaataatagatataggatgcattgcttt---------taataaaaggaagggaggcattaatcatctcaaaataattcaaaaaagaagtaaactgaaaaagaatatat--------taatag---------------------------------------ttaaaagaagtatagacagaaagtacatactaat------tat---aaataaatccatgcatatca------------------------at---------aaacactccagataaaacacaatgattattagaatgtcagtaaaaatccagctatcttctatttacagt i chlSab2.chr18 I 2 C 0 s manLeu1.NW_012106698v1 408263 419 - 1517660 ttttaggcaaacaaaaattgagaaaatattaaagatgcatttaaggcag--aaaaaaaatgagcacagaataaaggcttgagcagtatgatggtacagaaaga-aaaacataaacatatgaacaaatata------c--aaatactggatgtataaaagagtaataatCACTTTTCATTTTTCTATAATAAGCCCTGAAATAATAGATATAGGATGCATTGCTTT---------TAATAAAAGGAAGGGAGGCATTAATCATCTCAAAATAATTCAAAAAAGAAGTAAACTGAAAAAGAATATAT--------TAATAG---------------------------------------TTAAAAGAAGTATAGACAGAAAGTACATACTAAT------TAT---AAATAAATCCATGCATATCA------------------------At---------aaacactccagataaaagacaatgattattagaatgtcagtaaaaatccagctatcttctatttacagt i manLeu1.NW_012106698v1 I 2 C 0 s calJac3.chr13 105273232 386 + 117903854 ttttaggcaaagaaaaattgagaaaatattaaagatacacttaaggcag---aaaaaaatgagcccagaaaaaaggCTTGAACAGTATGATGGTACAGAAAAA-AAACCATAAATATAGAAATAAATATA------CATAAATATTGGATGTATAAATGAGT------------------------------------------------AGGATGCATTGCTTT---------TAATAAAAGGAAAGGAAGCTTTACTCATCTCAAAGTAATTCAAGAAAGAAGTAAATTAAAAAGGAATATAT--------TAATAG---------------------------------------TTaaaagaggtatagacagaaagtacatactaat------tat---atataaatccatgaacatcaataat---------cac-atggatat---------aaacacttcagataaaagacaataattggtagaatgtgagtaaaaatcctgctatcatttatttacagt i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19461989 378 - 31320352 ttttaggcaaacaaaaattgagaaaatattaaagatatacttaaggcag----aaaaaatgagcacagaaaaaaggcttgaACAGTATGATGGTACAGAAAAA-----CATAAACATAGAAATAAATATA------CATAAATATTGGATGTATAAATGAGT------------------------------------------------AGAATGCATTGCTTT---------TAATAAAAGGAAGGGAAGCATTAATCATCTTAAAATAATTCAAGA---AAGTAAATTAAAAAGGAATATAT--------TCATAG---------------------------------------TTAAAAGAGGCatagacagaaagtacatactaat------tat---aaataaattcatgaatatcaataat---------cac-atggatat---------aaacacttcagataaaagacaatgattgttagaatgtgagtaaaaatcctgctatcatctacttacagt i saiBol1.JH378121 I 2 C 0 s cebCap1.NW_016107689v1 1657500 388 + 2203405 ttttaggcaaacaaaaattgagaaaatATTAAAGATACACCTAAGGCAG--AAAAAAAATGAGCACAGAAAAAAGGCTTGAACAGTATGATGGTACAGAaaaaaaaaacataaacatagaaataaatata------cataaatattggatgtataaatgaat------------------------------------------------aGGATGCATTGCTTT---------TAATAAAAGGAAGGGAAGCATTAATCATCTCAAA-TAATTCAAGAAAGAAGTAAATTAAAAAGGAATATAT--------TAATAG---------------------------------------TTAAA--AGGCatagacagaaagtacatgctaattacaggtat---aaataaatccatgaatatcaataat---------cac-atggatat---------aaacacttcagataaaagacaatgattgttagaatgtgagtaaaaattctgttatc---tatttacagt i cebCap1.NW_016107689v1 I 2 C 0 s aotNan1.NW_018502140v1 3609440 384 - 14941987 ttttaggcaaacaaaaattgagaaaatATTAAAGATACACTTAAGGCAG---AAAAAAATGAGCACAGAAAAAAGGCTTGAACAGTATGATGGTacagaaaga-aaaacataaacatagaaataaatata------GATAAATATTGGATGTATAAAAGAGT------------------------------------------------AGGATGCATTGTTTT---------TAATAAAAGGAAGGGAAGCATTAATCATCTCAAAATAATTCAAGAAAGAAATAAATTTAAAAGGAATATAT--------TAATCG---------------------------------------TTAAAAGAGGTATAGACAGAACGTACATACTAAT------TAT---AAATAAATCCATGCATATCAATAAT---------CAT-ATGGATAT---------AAACACTTCAGAT--AAGATAATAATTGTTAGAATGTGAGTGAAAATCCTGCTATCATCTATTTACAGT i aotNan1.NW_018502140v1 I 2 C 0 s proCoq1.NW_012148742v1 1267308 445 - 1406956 TTTTAATCAA--AAAATTTGAGAAAATATTAAAGATATACTTAAGGCAG---AAAAAAATGGGCACAGTAGCAAGATTTGAACAGTATGATGGAATAGAAAGA-AAAAAGTAAACATATGAATAAACAGAAA----C--AAATATTTGG-ATATATAAAAGTAATAATCACTTTTGATTTTCCTATAAtaagctctgaagtaacagaaataggatatatgcttttaaactataatagtaaaagggcaggaggtattaatcatctcaaaataattcaagaaaggagaaaatcaaaagggaatatag-----------------------------------------------------ttaatagaggtataaacaga--gtacctgctaat------tattaaaaatagatccaagcatatgaataat---------tacaatgaatataaatagattaaacacttcagataaaagacgatgattgttaggatatgaataaaaatctacctacattctatttacaag i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11236611 507 - 20685099 TTTTAACCAG--AAAAAAAGAGAAAATATTAAAGGCATACTTAAAGTAGAAAAAAAAAAGGGTCATAGAAGAAAGTCTTGGACAGTGTTATGGAATAGAAATA-AAAATGTAAGCATATGAATAACTATAAATAATC--AAATATTGAATAAATAGAAGAGTAATAATGACTTTTAATTTTCCTAGAATAAGCCCTGAAGT---AGAACTAGGTTGAATGCTTTTAAAC-----TAGTAAAATGGTGGAAGGCATTAATCATTTCAAAATACTTGAAGAAAGGAGAaaactaaaagagaatatggaaaaaaactaatggaaatataaacagaaaactaaaagagaataaggaaaaaaactaatggaaatataaacaga--atacctgctaat------aattaaaaataaatccaagtatatcagtaacaacaatgaatataatgaatataagtagatgaaacactccagaaaaaagacaatgattgttaaaatataaataaaaatctacctacattctatttataaC i otoGar3.GL873546 C 0 I 174 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e colAng1.NW_012115433v1 3505172 12 + 6513552 I a score=1256265.000000 s hg38.chr18_GL383571v1_alt 141766 128 + 198278 atgtatattaaaaacatcaggCCACAAAATGTTTGGTAATATCAAAATGAAAAATTACATCTCAAACTAATACT-------AAACAAAGTTCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTG s panTro5.chr18 65051785 128 + 78221452 atgtatattaaaaacatcaggccacaaaatgtttggtaatatcaaaatgaaaaattacatctcaaactaatact-------aaacaaaGTTCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64170853 126 + 77229886 atgtatattaaaaacatcaggccacaaaatgtttggtaatatcaaaatgaaaaattacatctcaaactaatact-------aaacaaaGTTCCAACATACTGAAGATAAAAAGTAATAAC--G---------AGA----TAAATAGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390357 128 + 17472758 atgtatattaaaaacatcaggccacaaaatgtttggtaatatcaaaatgaaaaattacatctcaaactagtact-------aaacaaaGTTCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430497 137 - 152096393 atgtatattaaaaacatcaggccacaaaatgtttggtaatatcaaaatgaaaaattacatctcaaactaatact-------aaacaaaGTTCCAACATACTGAAGATAAAATGTAATAACAAGAGATAAATAAGA----TAAATAGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57380865 128 + 70235451 ATGTATATTAAAAACATCAGGCCACAAAATGTTTGATAATATCAAAATGAAAAATTACATCTCAAACCAATACT-------AAACAAAGTCCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072271 128 - 75711847 atgtatattaaaaacatcaggccacaaaatgtttgataatatcaaaatgaaaaattacatctcaaaccaatact-------aaacaaaGTCCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631486 128 - 18804593 ATGTATATTAAAAACATCAGGCCACAAAATGTTTGATAATATCAAAATGAAAAATTACATCTCAAACCAATACT-------AAACAAAGTCCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243303 128 + 18905526 ATGTATATTAAAAACATCAGGCCACAAAATGTTTGATAATATCAAAATGAAAAATTACATCTCAAACCAATACT-------AAACAAAGTCCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60071618 128 - 72318688 atgtatattaaaaacatcaggccacaaaatgtttgataatatcaaaatgaaaaattacatctcaaaccaatact-------aaacaaaGTCCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 408682 128 - 1517660 atgtatattaaaaacatcaggccacaaaatgtttgataatattaaaatgaaaaattacatctcaaaccaatact-------aaacaaaGTCCCAACATACTGAAGATAAAAAGTAATAACAAG---------AGA----TAAATAGTA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105273618 131 + 117903854 atgtatattaaaaacatcagatcacaaaatgtttgataatatcaaaatgaaaatttacatgtcaaactaatact-------aaacaaaATTCCAACATACTTAAGATAAAAA-TAATAACAAA---------AGATATGTATATAGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19462367 127 - 31320352 atgtatattaaaaacattagACCACAAAATGTTTGATAATATCAAAATGAAAATTTACATGTCAAACTAATGCT-------AAACAAAGTTCCAACATACttaagataaaaa-taataacaaa---------aga----taaatagca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1657888 124 + 2203405 atgtatattaaaaacatcagaccacaaaatgtttg---atatcaaaatgaaaatttacatgtcaaactaatact-------aaacaaaGTTCCAACATACTTaagataaaaa-taataacaaa---------aga----taaatagca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3609824 127 - 14941987 ATGTATATTAAAAACATCAGACCACAAAATGTTTGATAATATCAAAATGAAAATTTACACGTCAAACTAATACT-------AAACGAAGTTCCAACATACTTAAGATAAAAA-TAATAACAAA---------AGA----TAAATAGCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1267753 122 - 1406956 atgtatactaaaaacaccaggccacaaaatgtttgaaaatatctgaattaaaaattacat-----gctaatact-----taaaggaaagttgtaatatactgaagagaaaaagtgaca---ag---------aga----taactagag i proCoq1.NW_012148742v1 C 0 I 44 s otoGar3.GL873546 11237292 132 - 20685099 ATATATACTAGAAACATCAGGCCACAAAATGTGTGAAA--ATCTGATTAAAAAATTACATGTCTGGCTAAAAGTGACAACAAAGGAAAGTTA-ACTATAGTGAAAAGAGCATGTCACAATGAG---------AGA----TAACTAGAA i otoGar3.GL873546 I 174 I 2 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e colAng1.NW_012115433v1 3505172 12 + 6513552 I a score=279524.000000 s hg38.chr18_GL383571v1_alt 141894 30 + 198278 CTGTATAAATTTAAGAATAACT-----------CAACCATG s panTro5.chr18 65051913 30 + 78221452 CTGTATAAATTTAAGAATAACT-----------CAACCATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64170979 30 + 77229886 CTGTATAAATTTAAGAATAACT-----------CAACCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390485 30 + 17472758 CTGTATAAATTTAAGAATAACT-----------CAACCATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430634 30 - 152096393 CTATATAAAGTTAAGAATAACT-----------CAACCATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57380993 30 + 70235451 CTATATAAATTTAAGAATAACT-----------CAACCATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072399 30 - 75711847 CTATATAAATTTAAGAATAACT-----------CAACCATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631614 30 - 18804593 CTATATAAATTTAAGAATAACT-----------CAACCATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243431 30 + 18905526 CTATATAAATTTAAGAAAAACT-----------CAACCATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60071746 30 - 72318688 CTATATAAATTTAAGAATAACT-----------CAACCATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 408810 30 - 1517660 CTATATAAATTTAAGAATAACT-----------CAACCATG i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105273749 30 + 117903854 CTATATAAATTTAAGAATAACT-----------CAACCATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19462494 30 - 31320352 ctatataaatttaagaataatt-----------caaccatg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658012 30 + 2203405 ctatataaatttaagaataaCT-----------CAACCATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3609951 30 - 14941987 GTATATAAATTTAAGAATAACT-----------CAACCATG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11237426 39 - 20685099 CCCTGTAAATGTAAGAATTAACAgttacataaacaacca-- i otoGar3.GL873546 I 2 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1267875 44 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e colAng1.NW_012115433v1 3505172 12 + 6513552 I a score=474829.000000 s hg38.chr18_GL383571v1_alt 141924 47 + 198278 AGTTTcactggaagtcagaaaacatttagaagggttaatgaataaac s panTro5.chr18 65051943 47 + 78221452 AGTTTcactggaagtcagaaaacatttagaagggttaatgaataaac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171009 47 + 77229886 AGTTTcactggaagtcagaaaacatttagaagggttaatgaataaac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390515 47 + 17472758 AGTTTcactggaagtcagaaaacatttagaagggttaatgaataaac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430664 47 - 152096393 AGTTTcactggaagtaagaaaacatttagaagggttaatgaataaac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381023 47 + 70235451 AGTTTcactggaattcagaaaacacttagaaggtttaatggagaaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072429 47 - 75711847 AGTTTcactggaattcagaaaacacttagaaggtttaatggagaaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631644 47 - 18804593 AGTTTcactggaattcagaaaacacttagaaggtttaatggagaaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243461 47 + 18905526 AGTTTCACTGGAATTCAGAAAACACTTAGAAGGTTTAATGGATAAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60071776 47 - 72318688 AGTTTcactggaattcagaaaacacttagaaggtttaatggataaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 408840 47 - 1517660 AGTTTCACTGGAATTCAGAAAACACTTAGAAGGTTTAATGGATAAAC i manLeu1.NW_012106698v1 C 0 I 680 s calJac3.chr13 105273779 47 + 117903854 AGTTTcactggaattcagaaaacatttagaaaggttaatggataaac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19462524 47 - 31320352 agtttcactggaattcacaaaacacttagaaaggttaatggataaac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658042 43 + 2203405 ATTTTCACTGGAATTCAGAAAAC----AGAAAGGTTAATGGATAAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3609981 47 - 14941987 AATTTCACTGGAATTCAGAAAACACTTAGAAAGGTTAATGGATAAAC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1267919 47 - 1406956 AACTACACTGGAATTCAAAAAATACTTAGAAGGGATAATGGATAAGC i proCoq1.NW_012148742v1 I 44 C 0 s otoGar3.GL873546 11237465 42 - 20685099 -----cactggcattcaaaaaatactgagaagggataaaggataaac i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e colAng1.NW_012115433v1 3505172 12 + 6513552 I a score=1206153.000000 s hg38.chr18_GL383571v1_alt 141971 143 + 198278 tacatatcaaaatgtgtggaatataagcaatagggtttaaaaaataaattaatagccttaaattagtatagtaaaaaataataataatttaaaaATGGGAATGaaaaaaaaatt---acctcctgacattgaggagctggcctgtc s panTro5.chr18 65051990 142 + 78221452 tacatatcaaaatgtgtggaatataagcaatagggtttaaaaaataaattaatagccttaaattagtatagtaaaaaataataataatttaaaaAtgagaatg-aaaaaaaatt---acctcctgacattgaggagctggcctgtc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171056 142 + 77229886 tacatatcaaaatgtgtggaatataagcaatagagtttaaaaaataaattaatagccttaaattagtatagtaaaaaataataataatttaaaaAtgagaatg-aaaaaaaatt---acctcctgacattgaggagctggcctgtc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390562 141 + 17472758 tgcatatcaaaatctgtggaatataagcaatagggtttaaaaaataaattaatagccttaaattagtgtagtaaaaaataataataatttaaaaAtgagaatg--aaaaaaatt---acctcctgacattgaggagctggcctgtc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430711 142 - 152096393 tacatatcaaaatgtgtgcaatataagcaatatggtttaaaaaataaattaatagccttaaattagtatagtaaaaaataataataatttaaaaAtgagaatg-aaaaaaaatt---acctcctgacattgaggagctggcttgtc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381070 141 + 70235451 tacatatcaaaatgtgtggaagataagcaatatgatttaaaaggtaaattaatagccttaaatttgtatagtaaaaaataataaTAATTTTAAAAtgagaatt--aaaaaaaat---agctcctgacattgaggagctggcctgtt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072476 141 - 75711847 tacatatcaaaatgtgtggaagataagcaatatgatttaaaaggtaaattaatagccttaaatttgtatagtaaaaaataataaTAATTTTAAAAtgagaatt--aaaaaaaat---agctcctgacattgaggagctggcctgtt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631691 141 - 18804593 tacatatcaaaatgtgtggaagataagcaatatgatttaaaaggtaaattaatagccttaaatttgtatagtaaaaaataataaTAATTTTAAAAtgagaata--aaaaaaaat---agctcctgacattgaggagctggcctgtt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243508 141 + 18905526 TACATATCAAAATGTGTGGAAGATAAGCAATATGATTTAAAAGGTAAATTAATAGCCTTAAATTTGTATAGTAAAAAATAATAATAATTTTAAAAtgagaata--aaaaaaaat---agctcctgacattgagtagctggcctgtt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60071823 141 - 72318688 tacatatcaaaatgtgtggaagataagcaatatgatttaaaaggtaaattaatagccttaaatttgtatagtaaaaaataataataattttaaaatgagaata--aaaaaaaat---agctcctgacattgaggagctggcctgtt i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105273826 141 + 117903854 tacatatcaaaatatgtggaatataagcaatatggtttaaaagataaattaatagccttaaattagtatagt-aaaaatgataaaaattttaaaatGCAAATG-gaaaaacaac---agctcctaatattgaggagctggcctgtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19462571 141 - 31320352 tacgtatcaaaatatgtggaatataagcaatatggttcaaaagataaattaatagccttaaattagaatagt-aaaaatgataaaaattttaaaatGCAAATG-gaaaaacagt---agctcctgacattgaggagctggcctgtt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658085 141 + 2203405 TACATATCAAAATATGTGGAATATAAGCAATATGGTTCAAAAGATAAATTAATAGCCTTAAATTAGTATAGT-AAAAATGATAAAAATTTTAAAATGCaaatg-gaaaaacaat---agctcctgacattgaggagctggcctgtt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610028 141 - 14941987 TACATATCAAAATATGTGAAATATAAGCAAAATGGTTTAAAAGATAAATTAATAGCCTTAAATTAGTATAGT-AAAAATAATAAAAATTTTAAAATGCaaatg-gaaaaacaat---agctcctgacactgaggagctggcctgtt i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1267966 130 - 1406956 TACATATTAAAA---------TACAAGCAATATGGTTTTAAAGATAAATTAACAGCCTCAATTTAGCAAAAT-AAAAAGAATAAAAATTTTAAAAtgagaatg--aaaaaaat----agttcctgacattgaagagccggcctatc i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11237507 143 - 20685099 tacatattaaaatgtgtgcattataagcgatacagttttaaaggtaaattaatggcctcaaattagcaaagt-aaaaagaataaaaatGTTTAAAtgagaatg--aaataaagcaaaagctcctgacattgagaagctggcctgtg i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e colAng1.NW_012115433v1 3505172 12 + 6513552 I e manLeu1.NW_012106698v1 408887 680 - 1517660 I a score=701025.000000 s hg38.chr18_GL383571v1_alt 142114 69 + 198278 accatcagccagg-cccaatatcctcttgttgaacatgaaca-tttcacagaacaaagccactctgtcacc s panTro5.chr18 65052132 69 + 78221452 accatcagccagg-cccaatatcctcttgttgaacatgaaca-tttcacagaacaaagccactctgtcacc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171198 69 + 77229886 accatcagccagg-cccaatatcctcttgttgaacatgaaca-tttcacagaacaaagccactctgtcacc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390703 69 + 17472758 accatcagccagg-cccaatatcctcttattgaacatgaaca-tttcacagaacaaagccactctgtcacc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430853 69 - 152096393 accaacagccagg-cccaatatcctcttgttgaacatgaaca-tttcacagaacaaagccactctgtcacc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381211 70 + 70235451 accatcagccaggccccaatatcctcttgttaaacatgaaca-tttcatagaacaaagccactctgtcacc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072617 70 - 75711847 accatcagccaggccccaatatcctcttgttaaacatgaaca-tttcacagaacaaagccactctgtcacc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631832 70 - 18804593 accatcagccaggccccaatatcctcttgttaaacatgaaca-tttcacagaacaaagccactctgtcacc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243649 70 + 18905526 accatcagccaggccccaatatcgtcttgttaaacatgaaca-tttcacagaacaaagccactctgtcacc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60071964 70 - 72318688 accatcagccaggccccaatatcctcttgttaaacatgaaca-tttcacagaacaaagccactctgtcacc i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3505184 69 + 6513552 accatcagccagg-cccaatatcctcttgttaaacacgaaca-tttcacagaacaaagccactctgtcacc i colAng1.NW_012115433v1 I 12 C 0 s calJac3.chr13 105273967 69 + 117903854 accatcagccagg-cccaatatcctcctgtcaaacatgaata-tttcacagaacaaagccactctgttccc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19462712 69 - 31320352 accatcagccagg-cccaatatcctcctggtaaccatgaata-tttcacagaacaaagccactctgttccc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658226 69 + 2203405 atcatcagccagg-cccaatatcctcctggtaaccatgaata-tttcacagaacaaagcgactctgttccc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610169 69 - 14941987 accatcagccagg-cccaatatcctcttgttaaacatgaata-tttcacagaacaaagccactctgttccc i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1268096 70 - 1406956 aacatcagccagg-cctagtgtcctcctgtggaacataaatagtttcacagaacatagctactctgtctcc i proCoq1.NW_012148742v1 C 0 I 37 s otoGar3.GL873546 11237650 57 - 20685099 aatctcagccaga-cctagtgtcctcttgttgaaca-------------agaacatgacttctctgtcccc i otoGar3.GL873546 C 0 I 1 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e manLeu1.NW_012106698v1 408887 680 - 1517660 I a score=280065.000000 s hg38.chr18_GL383571v1_alt 142183 37 + 198278 --tcagt-gatcaagacaaaaacgacactactccataatc s panTro5.chr18 65052201 37 + 78221452 --tcagt-gatcaagacaaaaacgacactactccataatc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171267 37 + 77229886 --tcagt-gatcaagacaaaaacgacactactccataatc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390772 37 + 17472758 --tcagt-gatcaagacaaaaacgacactactccataatc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430922 37 - 152096393 --tcagt-gatcaagacaaaaacaacactactccataatc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381281 37 + 70235451 --acagt-gatcaagacaaaaacaaaactacgccataatc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072687 37 - 75711847 --acagt-gatcaagacaaaaacaaaactacgccataatc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631902 37 - 18804593 --acagt-gatcaagacaaaaacaaaactacgccataatc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243719 37 + 18905526 --acagt-gatcaagacaaaaacaaaactacgccataatc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60072034 37 - 72318688 --acagt-gatcaagacaaaaacaaaactacaccataatc i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3505253 37 + 6513552 --acagc-gatcaagacaaaaacaacactactccataatc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105274036 38 + 117903854 --acaatggatcaaggaaaagacaacactacttcataatc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19462781 38 - 31320352 --acagtggatcaagaaaaagacaacactatttcataatc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658295 38 + 2203405 --acagtggatcaagaaaaagacaacactacttcataatc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610238 35 - 14941987 --acagtggatcaagaaaaag---acactacttcataatc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11237708 36 - 20685099 tgaca---gaccaagaacaaaacaagactgttctttagt- i otoGar3.GL873546 I 1 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268166 37 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e manLeu1.NW_012106698v1 408887 680 - 1517660 I a score=1893350.000000 s hg38.chr18_GL383571v1_alt 142220 199 + 198278 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcatgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgcattcatgtctccttctagataagatttattcagatacccaatcatagaactactcccacttcctaagagcagctaatcc s panTro5.chr18 65052238 199 + 78221452 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtattcatgtctccttctagataagatttattcagatacccaatcatagaactactaccacttcctaagagcagctaatcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171304 199 + 77229886 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtattcatgtctccttctagataagatttattcagatatccaatcatagaactactaccacttcctaagagcagctaatcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5390809 199 + 17472758 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatact-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtattcatgtctccttctagataagatttattcagatacccaatcatagaactactcccacttcctaaaagcagctaatcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139430959 199 - 152096393 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtattcatgtctccttttagataagatttattcagatacccaatcatagaactacatccacttcctgagagtagctaatcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381318 199 + 70235451 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattatagctttagcctctctgtactcatgtctccttccacataagatttattcatatacccaatcatagtactacccccacttcctgagagtagctaatcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63072724 199 - 75711847 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtactcatgtctccttccacataagatttattcatatacccaatcatagtactacccccacttcctgagagtagctaatcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13631939 199 - 18804593 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtactcatgtctccttctacataagatttattcatatacccaatcatagtactacccccacttcctgagagtagctaatcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13243756 199 + 18905526 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtactcatgtctccttccacataagatttattcatatacccaatcatagtactacccccacttcctgagagtagctaatcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60072071 199 - 72318688 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gcacattcctgtctcccggttaatataagcaatggcta-----------------------------ctttttcatcaattacagctttagcctctctgtactcatgtctccttccacataagatttattcatatacccaatcatagtactacccccacttcctgagagtagctaatcc i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3505290 164 + 6513552 atgtttgaatacagaaaaagtata---aacattttctaaaccacaaaatagt-gc-----------------------------------a-----------------------------ctttttcatcaattacagctttagcctctctgtactcatgtctccttctacataagatttattcaaatacccaatcatagaactacccccacttcctgagagtagctaatcc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105274074 191 + 117903854 atgtttgaatacaggaaaagtata---aacatttgctaaaccacaaaatagt-gcacattcctgtctcccagttaatatatgcaaagggta-----------------------------ctttttcgtcaattatagctttagcctctctgtactcatctctccttctatgtaagatttattcagataccca--------tctactcctacttcctgagagaagctaatcc i calJac3.chr13 C 0 I 1027 s saiBol1.JH378121 19462819 190 - 31320352 atgtttgaatacaggaaatgtata---aacatttgctaaaccacaaattagt-gcacattcctgtctccaagttaatatatgcaaagggta-----------------------------ctttttcatcaattatagctttagcctctctgtactcatctct-cttctatattagatttattcagataccca--------actactcctacttcctgacagaagctaatct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658333 187 + 2203405 atgtttgaatacaggaaaagtata---aacatttgctaaaccacaaaatagg-gcacattcctgtctccaagttaatatacgcaaagggta-----------------------------ctttttcatcaattatagttttagcctctctgtactcacct---ctcctatgt-agatttattcagataccca--------actattcctacttcttgagagaagctaatcc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610273 190 - 14941987 acgtttgaatacagtaaaagtata---aacatttgctaaaccacaaaatagt-gcacattcctgtctcccagttaatatatgcaaagggta-----------------------------ctttttcatcaattatagttttagcctctttgtactcatctcttcttctatac-aagtttattcagataccca--------actactcctacttcctgagagaaactaatcc i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1268203 228 - 1406956 atgtctgaatacagaaaaagcata---aacattttctaagccacaaaatact-gcacatccctgtctcccaaataagatgagtgacagctactttttcttcttcctcttttttttttttttttttttaccaattacagcattagcctctctctactctttcctccttcaggataagatgtattcagatacccaaatataaaactatccccactttcagacagcagctaatcc i proCoq1.NW_012148742v1 I 37 C 0 s otoGar3.GL873546 11237744 202 - 20685099 aggtttgcatacagaaaaagtataacgaacattttctaaaccacaaaataatggttcatccctgtctcccaggtaatatgaatgatggcaa-----------------------------ttttttggctaattacagcattggcctcttgctaatcttcccctcttctagagaagatgtactcagatacccagtcacacaactaccctcaacttctg-cagcagccaaccc i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e manLeu1.NW_012106698v1 408887 680 - 1517660 I a score=1603892.000000 s hg38.chr18_GL383571v1_alt 142419 182 + 198278 agagaaaagccacacttcttaaatctctctcactaaaagaagcaataaatccAGCTTACTCCTGGTGGGTTTTGGC---AGGAGTCCGGC---------------------AAAAAaaaatgga-----tcatatatct-cat--------taaagaagatacaaaacacaccatcgaaagcaaattag-aaaaaaataaaatagaatgaaggaaataggt s panTro5.chr18 65052437 188 + 78221452 agagaaaagccacacttcttaaatctctctcactaaaagaagcaataaatccAGCTTACTCCTGGTGGGTTTTGGC---AGGAATCTGAC---------------AAAAAAAAAAAAAAATGGA-----TCATATATCT-CAT--------TAAAGAAGATACAAAACACACCATCGAATGCAAATTAG-AGAAAAATAAAATAGAATGAAGGAAATAGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171503 184 + 77229886 agagaaaagccacacttcttaaatctctctcactaaaagaagcaataaatccAGCTTACTCCTGGTGGGTTTTGGC---AGGAATCTGAC-------------------AAAAAAAAAAATGGA-----TCATATATCT-CAT--------TAAAGAAGATACAAAACACACCATCGAATGCAAATTAG-AGAAAAATAAAATAGAATGAAGGAAATAGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5391008 183 + 17472758 agagaaaagccacacttcttaaatctctcGCACTAAAAGAAGCAATAAATCCAG-TTACTCCTGGTGGGTTTTGGC---AGGACTCTGAC-------------------AAAAAAAAAAATGGA-----TCATATATCT-CAT--------TAAAGAAGATACAAAACACACCATCGAAAGCAAATTAG-AAAAAAATAAAATAGAATGAAGGAAATAGGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139431158 189 - 152096393 agagaaaagccacacttcttaaatctctctcactaaaagaagcaataaatccagcttattcctggtgggttttggc---aggacactgac-------------aaaaaaaaaaaaaaaaatgga-----tcatatgtct-aat--------taaagaagatacaaaatacaacatcgaaagcaaattag-a-aaaaataaaatagaatgaaagaaataggt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381517 210 + 70235451 agagaaacgccacacttcttaaatatctctcactacaagaagcaataaatccagcttattcctggtgggttttcacaggaggacactgacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGA-----TCATATATCT-AATTATCTAACTAAAGAAGATACAAAACACAACATCAAAAGCAAATTAG-AAAAAAATAAAATAGAAT----GAAATAGGT i rheMac8.chr18 C 0 I 40 s macFas5.chr18 63072923 210 - 75711847 agagaaacgccacacttcttaaaTATCTCTCACTACAAGAAGCAATAAATCCAGCTTATTCCTGGTGGGTTTTCACAGGAGGACACTGACaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGA-----TCATATATCT-AATTATCTAACTAAAGAAGATACAAAACACAACATCAAAAGCAAATTAG-AAAAAAATAAAATAGAAT----GAAATAGGT i macFas5.chr18 C 0 I 40 s macNem1.NW_012016688v1 13632138 200 - 18804593 agagaaacgccacacttcttaaatatctctcactacaagaagcaataaatccagcttattcctggtgggttttcacaggaggacactgac----------aaaaaaaaaaaaaaaaaaaaaGGA-----TCATATATCT-AATTATCTAACTAAAGAAGATACAAAACACAACATCAAAAGCAAATTAG-AAAAAAATAAAATAGAAT----GAAATAGGT i macNem1.NW_012016688v1 C 0 I 40 s cerAty1.NW_012001075v1 13243955 202 + 18905526 agagaaacgccacacttcttaaatatctctcactacaagaagcaataaatccagcttattcctggtgggttttcgcaggaggacactgac--------aaaaaaaaaaaaaaaaaaaaaaaGGA-----TCATATATCT-GATTATCTAATTAAAGAAGATACAAAACACAACATCAAAAGCAAATTAG-AAAAAAATAAAATAGAAT----GAAATAGGT i cerAty1.NW_012001075v1 C 0 I 40 s chlSab2.chr18 60072270 190 - 72318688 agagaaacgccacacttcttaaaTATCTCTCACTACAAGAAGCAATAAATCCAGCTTATTCCTGGTGGGTTTTCGCAGGAGGATACCGAC--------------------CAAAAAAAAAAGGA-----TCATATATCT-AATTATCTAATTAAAGAAGATACAAAACACAACATCAAAAGCAAATTAG-AAAAAAATAAAATAGAAT----GAAATAGGT i chlSab2.chr18 C 0 I 40 s colAng1.NW_012115433v1 3505454 186 + 6513552 agagaaaagccacacttctgaaatctctctcaCTACAAGAAGCTATAAATCCAGCTCATTCCTGGTGGGTTTTCGCAGGAGGACACTGAC----------------aaaaaaaaaaaaaaagga-----tcatatatct-aat--------taaagaagatacaaaacacaacatcaaaagcaaattag-aaaaaaataaaatagaat----taaataggt i colAng1.NW_012115433v1 C 0 I 39 s calJac3.chr13 105275292 179 + 117903854 AGAGAAAAGCCACACTTCTTAAAtctctctcactgcaatatgcaataaacccagcttattcctggtggattctggcagtaggacactgac----------------------CAAAagaatgga-----tcatatatct-aat--------taaagaagatacaaaacacaacatcaaaagaaaattag-aaaaaaatagaatgaag-----gaaatacgt i calJac3.chr13 I 1027 C 0 s saiBol1.JH378121 19463009 179 - 31320352 agagaaaagctacacttcttaaatctctctcactgcaataagcaataaacccagcttattcctggcgaattttggcagtaggacactgac----------------------CAAAAGAATGGA-----TCATATATCT-AAT--------TAAAGAAGATACAAAACACAACATCAAAAGAAAACTAG-AAAAAAATAGAATGAAG-----GAAACAGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658520 180 + 2203405 agagaaaagccacacttcttaaatctctctcactggaatacgcaataaacccagcttattcctggtggattttggcagcaggacactgac----------------------CAAAAGAATAGA-----TCATATATCT-AAT--------TAAAGAAGATACAAAACACAACATCAAAAGAAAATTAGAAAAAAAATAGAATGAAG-----GAAATAGGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610463 180 - 14941987 agagagaagccacacttcttaaatctctctcactgcaatatgcaataaacccagcttattcctggtggattttggcagtaggacactgac----------------------CAAAAGAGTGGA-----TCATATATCTAAAT--------TAAAGAAGATACAAAACACAACATCAAAAGAAAATTAG-AAAAAAATAGAATGAAG-----GAAATATGT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1268431 184 - 1406956 agagcaaagtcacacttcttcaatccctctcagtgcaataagcaataaatccagcttgctcctggtgctttgtggctggaggacattgac---------------------aAAAAATAATGGG-----CCATATACCT-TAT--------TAaagaagatacaaaacataagatcgaaagcaaattag-a-aaaaataaaatagaatgaaggaaacatgt i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11237946 188 - 20685099 acagcaaaatcctgcttcttaatagcttctcactgcaataagcaatcaatctaacttgtttcagtggttttg-agctggaggacactgac---------------------aAAAAATAATGGGTCATATCATATACCT-TAT--------TAAAGAAAATACAAATTATAAGATCaaaagcacattaa-c-aaagataaaatagaataaaggaaatatgt i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e manLeu1.NW_012106698v1 408887 680 - 1517660 I a score=2587466.000000 s hg38.chr18_GL383571v1_alt 142601 238 + 198278 aaaatcagaagccaaagttaatgcaacagcaaatgtacataaaatagaagttagaaacaaagtaaaactaaaaattaatcttcaaaaaga--cacattataaaagggaaactccaattaagtaataaaaggaaataaagcacacatgctcaatattaaggatag-aaaaAATATGTAGGGGATGAA----TAGAGAGGCAACAGAATCTGCATTTTGAGTAAACTTGGGTCAATAAATGTGAAAA s panTro5.chr18 65052625 238 + 78221452 AAAATCAGAAGCCAAAGTTAATGCAACAGCAAATGTACATAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAATTAATCTTCAAAAAGA--CATATTATAAAAGGGAAACTCCAATTAAGTAATAAAAGGAAATAAAGCACACATGCTCAATATTAAGGATAG-AAAAAATATGTAGGGGGTGAA----TAGAGAGGCAACAGAATATGCATTTTGAGTAAACTTGGGTCAATAAATGTGAAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171687 238 + 77229886 AAAATCAGAAGCCAAAGTTAATGCAACAGCAAATGTACATAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAATTAATCTTCAAAAAGA--CATATTATAAAAGGGAAACTCCAATTAAGTAATAAAAGGAAATAAAGCACACATGCTCAATATTAAGGATAG-AAAAAATATGTAGGGGGTGAA----TAGAGAGGCAACAGAATATGCATTTTGAGTAAACTTGGGTCAATAAATGTGAAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5391191 240 + 17472758 AAAATCAGAAGCCAAAGTTAATGCAACAGCAAATGTACATAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAATTAATCTTCGAAAAGACTCATATTATGAAAGGGAAACTCCAATTAAGTAATAAAAGGAAATAAAGCACACATGCTCAATATTAAGGATAG-AAAAAATATGTAGGGGGTGAA----TAGAGAGGCAACAGAATATGCATTTTGAGTAAACTTGGGTCAATAAATGTGAAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139431347 241 - 152096393 aaaatcagaagccaaagttaatgcaacagcaaatgtacataaaatagaagttagaaacaaagtaaaactaaaagttaatcttcgaaaagacttatattataaaagggaaactccaattaagtaataaaaggaaataaagcacacatgctcaatattaaggatagaaaaaaatatgtagggggtgaa----tagagaggcaacagaatatgcattttgagtaaacttaggtcaataaatgtgaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57381767 235 + 70235451 AAAACAAGAAGCCAAAGTTAATGCAACAGCAAATGTACACAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAGTTAATCTTCGAAAAGACTTATATTATAAAAGGGAAACTCCAATTAAATAATAAAAGGAAATAAGGCACACATGTTCAATATTAAGGATAGAAAAAAATATGTAGGGG-TGAA----TAGAGAGGCAACA-AATATGCATTTTGAGTAAATTTAGGTCAATAAATGTG---- i rheMac8.chr18 I 40 C 0 s macFas5.chr18 63073173 235 - 75711847 aaaacaagaagccaaagttaatgcaacagcaaatgtacacaaaatagaagttagaaacaaagtaaaactaaaagttaatcttcgaaaagacttatattataaaagggaaactccaattaaataataaaaggaaataaggcacacatgttcaatattaaggatagaaaaaaatatgtagggg-tgaa----tagagaggcaaca-aatatgcattttgagtaaatttaggtcaataaatgtg---- i macFas5.chr18 I 40 C 0 s macNem1.NW_012016688v1 13632378 234 - 18804593 AAAAACAGAAGCCAAAGTTAATGCAACAGCAAATGTACACAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAGTTAA-CTTCGAAAAGACTTATATTATTAAAGGGAAACTCCAATTAAATAATAAAAGGAAATAAGGCACACATGTTCAATATTAAGGATAGAAAAAAATATGTAGGGG-TGAA----TAGAGAGGCAACA-AATATGCATTTTGAGTAAATTTAGGTCAATAAATGTG---- i macNem1.NW_012016688v1 I 40 C 0 s cerAty1.NW_012001075v1 13244197 234 + 18905526 AAAAACAGAAGCCAAAGTTAATGCAACAGCAAATGTACACAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAGTTAATCTTCGAAAAGACTTACATGATAAAAGGGAAACTCCAATTAAATAATAAAAGGAAATAAGGCACACATGTTCAATATTAAGGATAGAAAAAAATATGTAGGGG-TGAA----TAGAGAGGCAACA-AATA-GCATTTTGAGTAAATTTAGGTCAATAAATGTG---- i cerAty1.NW_012001075v1 I 40 C 0 s chlSab2.chr18 60072500 237 - 72318688 aaaaacagaagccaaagttaatgcaacagcaaatgtacacaaaatagaagttagaaac--agtaaaactaaaagttaatcttcgaaaagacttatattataaaaggtaaactccaattaaataataaaaggaaataaggcacacatgttcaatattaaggatagaaaaaaatatgtagggg-tgaa----tagagaggcaaca-aatatgcattttgagtaaatttaggtcaataaatgtggaaa i chlSab2.chr18 I 40 C 0 s manLeu1.NW_012106698v1 409567 235 - 1517660 AAAAACAGAAGCCAAAGTTAATGCAATAGCAAATGTACACAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAGTTAATCTTCGAAAAGACTTACATTATAAAAGGGAAACTCCAATTAAATAATAAAAGGAAATAAGGCACACATGTTCAATATTAAGGATAGAAAAAAATATGTAGGGG-TGAA----TAGAGAGGCAACA-AATATGCATTTTGAGTAAATTTAGGTCAATAAATGTG---- i manLeu1.NW_012106698v1 I 680 C 0 s colAng1.NW_012115433v1 3505679 239 + 6513552 AAAAACAGAAGCCAAAGTTAATGCAACAGCAAATGTACACAAAATAGAAGTTAGAAACAAAGTAAAACTAAAAGTTAATCTTTGAAAAGACTTATATTATAAAAGGGAAACTCCAATTAAATAATAAAAGGAAATAAGGCACACATGTTCAATATTAAGGATAGAAAAAAATATGTAGGGG-TGAA----TAGAGAGGCAACA-AATATGCATTTTGAGTAAATTTAGGTCAATAAATGTGGAAA i colAng1.NW_012115433v1 I 39 C 0 s calJac3.chr13 105275471 240 + 117903854 aaattcaggagccaaagttaatgcaacagcgaatgtacataaaacagaagttagaaacaaaccaaaactaaaagttaatcttcaaaaggattta---tataaaaggcaaactccaattaagtaataaaagaaaataaggtacacatgctcactactaaagatagaaaaaaatatgtaggcggtgaagagttaaagaggcaacagaat--gcattttgagtaaatttaggtcaataaatgtgaaaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19463188 240 - 31320352 AAAATCAGGAGCCAAAGTTAATGCAACAGCAAATGTACATAAAATAGAAGTTACAAACAAACTAAAACTAAAAGTTAACCTTCAAAAAGACTTA---TATAAAAGGCAAACTCCAATTAAGTAATAAAACAAAATAAGGCACACATGCTCAATACTAAAGATAGAAAAAAATATGTAGGGGGTGAAGAGTTAAAGAGGCAACAGAAT--GCATTTTGAGTAAATTTAGGTCAATAAATGTGAAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658700 240 + 2203405 AAAATCAGGAGCCAAAGTTAATGCAACAGCAAACGTACATAAAATAGAAGTTAGAAACAAACAAATACTAAAAGTTAATCTTCAAAAAGACTTA---TATAAAAGGCAAACTCCAATTAAGTAATAAAAGAAAATAAGGCACACGTGCTCAATACTAAAGATAGAAAAATATATGTAGGGGGTGAAGAGTTAAAGAGGCAACAGAAT--GCATTTTGAGTAAATTTAGGTCAATAAATGTGAAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610643 240 - 14941987 AAAATCAGGAACCAAAGTTAATGCAACAGCAAATGTACATAAAATAGAAGTTAGAAACAAACCAAAACTAAAAGTTAATCTTCAAAAAGACTTA---TATAAAAGGCAAACTCCAATTAAGTAATAGAAGAAAATAAGGCACACATGCTCAATACTAAAGATAGAAAAAAATATGTAGGGGGTGAAGAGTTAAAGAGGCAACAGAAT--GCATTTTGAGTAAATTTAGGTCAATAAATGTGAAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1268615 229 - 1406956 aagatctggagtcaaagttaat-----agtgaatgtacataaaatagaaattaggaattaaaaaaagctaaaagttaatctctgaaaag-tcta---tataaaaggcaaactccagtcagggaatacaaggaaataaggtacacatactcaatattagagatgg-aaaaaatatgtggaggatgaa----tagagaggcaacagaat--gaattttgagcaaatttgggtcaacaaatgtgaaaa i proCoq1.NW_012148742v1 C 0 I 3744 s otoGar3.GL873546 11238134 231 - 20685099 aaaatcaagagtcaaagttaattcaacaacaaatgaacattaagtagactttagtaa-taaacagagct-aaagtcagtcactgagaagaccta---tat-aaagacaaactgcagtcaagaaatacaaagaaataagacacacatactcaatattagatatgg--aaaaatatgtgggggatgaa----ttgagaggcaacagaat--atattctgagcaaatttaggttaatcgttgtgaaaa i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=57871.000000 s hg38.chr18_GL383571v1_alt 142839 8 + 198278 -AGAAAAGG s panTro5.chr18 65052863 8 + 78221452 -AGAAAAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171925 8 + 77229886 -AGAAAAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5391431 8 + 17472758 -AGAAAAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139431588 8 - 152096393 -AGAAAAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57382002 7 + 70235451 --GAAAAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63073408 7 - 75711847 --gaaaAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13632612 7 - 18804593 --GAAAAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13244431 7 + 18905526 --GAAAAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60072737 8 - 72318688 -AGAAAAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 409802 7 - 1517660 --GAAAAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3505918 8 + 6513552 -AGAAAAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105275711 8 + 117903854 -AGAAAAGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19463428 8 - 31320352 -AGAAAAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658940 8 + 2203405 -AGAAAAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610883 8 - 14941987 -AGAAAAGG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11238365 8 - 20685099 cctaaaag- i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=357894.000000 s hg38.chr18_GL383571v1_alt 142847 47 + 198278 ACACAGACTGGGCAATAGAGTAAGACTCCATCTCTACaaaaataatt s panTro5.chr18 65052871 47 + 78221452 ACACAGACTGGGCAATAGAGTAAGACTCCATCTCTACaaaaataatt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171933 47 + 77229886 ACAcagactgggcaatagagtaagactccatctctacaaaaataatt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5391439 47 + 17472758 ACAcagactgggcaatagagtaagactccatctctacaaaaataatt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139431596 47 - 152096393 ACACAGACTGGGCAATAGAGTAAGACCTCATCTCTACaaaaataatt i nomLeu3.chr4 C 0 I 310 s rheMac8.chr18 57382009 45 + 70235451 --Acagactggtaaatagagtaagaccccatctctacaaaaataatt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63073415 45 - 75711847 --Acagactggtaaatagagtaagaccccatctctacaaaaataatt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13632619 45 - 18804593 --Acagactggtaaatagagtaagaccccatctctacaaaaataatt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13244438 45 + 18905526 --ACAGACTGGTAAATAGAGTAAGACCCCATCTCTGCAAAAATAATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60072745 44 - 72318688 --Acagactggtaaatagagtaagaccccatctctacaaaaataa-t i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 409809 45 - 1517660 --Acagactggtaaatagagtaagaccccatctctacaaaaataatt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3505926 45 + 6513552 --Acagactggtaaatagagtaagaccccatctctacaaaaataatt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105275719 37 + 117903854 ACAcagactgggcaataaagcaagacttcatctctac---------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19463436 37 - 31320352 ACAcagactgggcaataaagcatgacctcatctctac---------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658948 37 + 2203405 ACATagactgggcaataaagcaagatctcatctctat---------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610891 37 - 14941987 ACAcagactgggcaataaagcaagacctcatctctac---------- i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e otoGar3.GL873546 11238373 0 - 20685099 C a score=1122971.000000 s hg38.chr18_GL383571v1_alt 142894 144 + 198278 aaaaaaaaaaaaaaaaaaaaC---TAGC----------CAGGTGCGGTGGTGTGCAGCAGTAGTTCCAGTTATTTGGGAGGGTGAGGTGGGAGATTGCTTGTGCCCAGGCGGTCAAGGTCACGCCATGCAATGCAGCCTATGTAACAGAATGagacc- s panTro5.chr18 65052918 143 + 78221452 -aaaaaaaaaaaaaaaaaaaC---TAGC----------CAGGTGCGGTGGTGTGCAGCAGTAGTTCCAGTTATTTGGGAGGGTGAGGTGGGAGATTGCTTGTGCCCAGGCGGTCAAGGTCACGCCACGCAATGCAGCCTATGTAACAGAATGagacc- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64171980 140 + 77229886 ----aaaaaaaaaaaaaaact---aagc----------taggtgcggtggtgtgcagcagtagttccagttatttgggagggtgaggtgggagattgcttgtgcccaggcggtcaaggtcatgccacgcaatgcagcctatgtaacagaatgagacc- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5391486 142 + 17472758 --aaaaaaaaaaaaaaaaaac---tagc----------caggtgcggtggtgtgcagcagtagttccagttatttgggagggtgaggtgggagattgcttgtgcccaggcagtcaaggtcacgccactcaatgcagcctatgtaacagaatgagacc- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139431953 140 - 152096393 aaaaaaaaaaaaaaaaaaaaa---TTgc----------caggtgcggtggtgt---gcagtagttctagttatttggga-ggtgaggtgggagattgcttgtgcccaggcggtcaaggTCATGCCACACAATGCAGCCTACGTAACAGAATAagacc- i nomLeu3.chr4 I 310 C 0 s rheMac8.chr18 57382054 136 + 70235451 --------ttttaaaaaaatc---tagc----------caggtgtggtggtgttcagcagtagttccagttatttgggagggtgaagtgggggaacgcttgcgcccaggaggtcaaggtcaccccacgcaatgtagcctatgtaacagaatgagacc- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63073460 136 - 75711847 --------tttaaaaaaaatc---tagc----------caggtgtggtggtgttcagcagtagttccagttatttgggagggtgaagtgggggaacgcttgcgcccaggaggtcaaggtcaccccacgcaatgtagcctatgtaacagaatgagacc- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13632664 137 - 18804593 -------aaaaaaaaaaaatc---tagc----------caggtgtggtggtgttcagcagtagttccagttatttgggagggtgaagtgggggaacgcttgcgcccaggaggtcaaggtcaccccacgcaatgtagcctatgtaacagaatgagacc- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13244483 136 + 18905526 --------TAAAAAAAAAATC---TAgc----------caggtgtggtggtgtgcagcagtagttccagttatttgggagggtgaagtgggggaatgcttgcgcccaggaggtcaaggtcaccccacgcaatgcagcCTATGTAACAGAATGagacc- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60072789 136 - 72318688 --------ttaaaaaaaaatc---tagc----------caggtgtggtggtgtgcagcagtagttccagttatttgggagggtgaggtgggggaacacttgcgcccaggaggtcaaggtcaccccactcaatgtagcctatgtaacagaatgagacc- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 409854 136 - 1517660 --------tttaaaaaaaatc---tagc----------caggtgtggtggtgtgcagcagtagttccagttatttgggagggtgaagtgggggaacgcttgcgcccaggaggtcaaggtcaccccacgcaatgcagcctatgtaacagaatgagacc- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3505971 136 + 6513552 --------ttttaaaaaaatc---tagc----------caggtgtggtggtgtgcagcagtagttccagttatttgggagggtgaagtgggagaacgcttgcgcctaggaagtcaaggtcacgccacgcaatgcagcgtatgtaacagaatgagacc- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105275756 145 + 117903854 ---caaaaaaaaaaaaaaaaaaaaaagc----------aaggtctggtggtatgcaccagtagttccagctatttgggagggtgaggtgggagatggcttgagcccaggcagtcaaggtcacgccacacaatgcagcctgCATAGCCAAATGAGAGCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19463473 155 - 31320352 ---aaaaaaaaaaatatatatatatatatatatatatgaagttctggtggtatgcacaagaagttccagctattcgggagggtgaggtgggagatggcttgagcccaggcagtcaaggtcacgccacacaatgcagcctgcgtaaccaaatgagaccA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1658985 142 + 2203405 ---aaaaaaaagaaaaaaaat---tagc----------aaggtctggtggtatgcaccagcagttccagctatttgggagggtgaggtgggagatggcttgagcccaggCCGTCAAGGTCACGCCACATAACGCAGCCTGCATAGCCAAATGAGACCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3610928 142 - 14941987 ---caaaaaaaaaaaaaaaaa---aagc----------aaggtctggtggtatgcaccagtagttccagctatttgggagggtgaggtgggagatggcttgagcccaggcagtcaaggTCACGCCACACAACACAGCCTACATAACCAAATGAGACCA i aotNan1.NW_018502140v1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e otoGar3.GL873546 11238373 0 - 20685099 C a score=22684415.000000 s hg38.chr18_GL383571v1_alt 143038 2256 + 198278 aaaaagacaaattcttaaaaccacaacttgccaaaacagacttacaaaataactatatgagctaaatagaataagtctataagcacaaaatacaattttacgcattgttaaaaagcttcccacaaagaaaatacaatggtcagacagctttacagataggttctaaggaacattctagcattaaatcatttcgatcttatgcaaactcttctaaagaacataaaactgaaagatttccaacttattttatgtgacaagtataatgttgacttc-aagattaggcaagtacaatatgagaaaagatgattacaggcaaatcacaattacgattgttgatgtaaacatcttaaactaattattaacaaagaaaattcagcaaactatacaaatataatgaatcattcccaggctcactttatcatagcaaaccaagttgaatttaatctcaaataagaaaagactttcacaaaatgcattacattaacagataaaggc-aagaaacacaggagaatattcataagatggaggaaaaacattcaataaatttcatcatggatttatgataagatgtcacttatcgaactaagaatagaagggaatatcacgtcctgataaggtgaacctatgaaatacatataatgtccgttttggaaagtagtgaaatgttagaagcactccattaacattataaatagcacaa---tacccattacaggta--ttaccatatctattcagtatttcacagagggtcctaacaaatgcagtaagaatattaaaaagttatacaattagaaagaa---aatataattcttagtaattacatgttaccaaaccatatacataaatatctccaaagagtttacaggcaaattgttgaattagtaagaagatttaataaggtccct-gatacaatataaatacacaaaaataaactgtattttctgtatactaggaagagttagaacatataattaacaataaatataatccaaggtaataacaatatataaagtgctctgacttaaatctacc-aaaggactaccaagta--ttaaataaaaggagatgcataccatgcccatgaatagggactaattaatgtaaagatgtcaactctcccaaaactgatacaatgcatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaacgtgcaaactaattctaaaatgcatatgtaagaacaaaggcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtagtaataaagacagtgtggta---ttgccattgatgtaatcaaatttgccagtggaatagaagagaaagccca-aagtagcctcctacaaaatacggagacttgatatttggtagagatggcattgaaggttagtgggg----aaaaaaAACAAACAAAA-AA-AACATGATTATTCAATCTC-----TTTAGGACAATAGGTTATTCATACA---AAATAAAAGTCAGAA------TAGAGACAACAATTAATATAAAGTAGATTAAATACTTATATATGAAAGACAAAATCtgtggcagatggactacaatatga----cccccaaattatccccatctcctggtacttatg-------------------cctttgtgtagccccttccttctgagtatggatgggacctctgacgtgctttcaaccattagaatgcagcaactatgatggg-tgtcactttcataatttatgctacattgttggcagagtttctctattgactgtcttcctggctttaatgaagcaagctgctat--acggagaggtccacatgg-aagctactaaaggtggaccccaggcaacaaccagaaaagtactgaagctttaggtcaaacaatctataaggtactgaatcctgccaacaatcatgtgagcttggaagcacatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagctttgtgaaacaccctaaagcagagtacccaactaagtcatg-gttgactcctgatctacagaaactgtgggataatcaatgcatgttgt-ttcaagccactaggtttctggtaatattgttaggcagcaataaata---attT------------------------T--AAAAAA-----TGCTtaggag-aaaatataggagaacatttttagggcc-aacatcttggggaaaaaattttagtaagatgcaaaaacagtacacataataaaagaaaacactgacatgtgtgattactttcaaattaagaacacctgtatatct s panTro5.chr18 65053061 2260 + 78221452 aaaaagacaaattcttaaaaccacaacttgccaaaacagacttacaaaataactatatgagctaaatagaataagtctataagcacaaaatacaattttacgcattgttaaaaagctccccacaaagaaaatacaatggtcagacggctttacagataggttctaacgaacattctagcattaaatcatttcgatcttatgcaaactcttctaaagaacataaaaatgaaagacttccaacttattttatgtgacaagtataatgtcgacttc-aaaattaggcaagtacaatatgagaaaagatgattacaggcaaatcacaattacaattgttgatgtaaacatcttaaactaattattaacaaagaaaattcagcaaactatacaaacataatgaatcattcccaggctcattttatcatagcaaaccaagttgaattcaatctcaaataagaaaagactttcacaaaatgcattacattaacagatagaggc-aagaaacacatgagaatattcataagatggaggaaaaacattcaataaatttcatcatgcattcatgataagatgtcacttattgaactaagaatagaaggtaatatcacgtcctgataaggtgaacctatgaaatacatacaatgtccattttggaaagtagtgaaatgttagaagcactccattaacattataaatagcacaa---tacccattacaggta--ttaccatatctattcagtatttcacagggggtcctaacaaatgcagtaagaatattaaaaagttataaaattagaaagaa---aatataattcttagtaattacatgttaccaaaccatatacataaatatctccaaagagtttacaggcaaattgttgaattaggaagaagatttaataaggtccct-gaaacaatataaatacacaaaaataaactgtattttctgtatactaggaagagttagaacatataattaacaataaatataatccacggtaataacaatatataaagtgctctgacttaaatctacc-aaaggactaccaagta--ttaaataaaaggagacgcataccatgcccatgaatagggactaattaatgtaaagatgtcaactctcccaaaactgatacaatgcatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaacaaagtcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtagtaataaagacagtgtggta---ttgtcattgatgtaatcaaatttgccagtggaatagaagagaaagccca-aagtagcctcctacaaaatacagagacttgatatttggtagagatggcattgaaggttagtggag----aaaaaaAACAAAC-AAA-AA-AACATGATTATTCAATCTTTTTAGTTTAGGACAATAGGTTATTCATACC---AAATAAAAGTCAGAA------TAGAGACAACAATTAATATAAAGTAGATTAAATACTTATATATGAAAGACAAAATCtgtggcagatggactgtaatatga----cccccaaattattcccatctcctggtacttatg-------------------cctttgtgtagccccttccttctgagtatggatgggacctctgacgtgctttcaaccattagaatgcagcaactatgatggg-tgtcactttcataatttatgctacattgttggcagagtttctctattgactgtcttcctggctttaatgaagcaagctgctat--acggagaggtccacatgg-aagctactaaaggcggaccccaggtaacaaccagaaaagtactgaagctttaggtccaacaatctataaggtactgaatcctgccaacaatcatgtgagcttggaagcacatgcttccccagttgagtctcagatgagattgcagccctagccagaaacttaattgcagctttgtgaaacaccctaaagcagagtacccaactaagtcata-gttgactcctgacctacagaaactgtgggataatcaatgcatgttgt-ttcaagccactaggtttctggtaatattgttaggcagcaataaata---attT------------------------T--AAAAAA-----TGCTtaggag-aaaatataggagaacatttttagggcc-aacatcttggggaaaaaattttagtaagatgcaaaaacagtacacataataaaagaaaacactgacatgcatgattactttcaaattaagaacacctgtatatct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64172120 2258 + 77229886 aaaaagacaaattcttaaaaccacaacttgccaaaacagacttacaaaataactatatgagctaaatagaataagtctataagcacaaaatacaattttacgcattgttaaaaagctccccacaaagaaaatacaatggtcagacggctttacagataggttctaacgaacattctagcattaaatcatttcgatcttatgcaaactcttctaaagaacataaaaatgaaagacttccaacttattttatgtgacaagtataatgtcgacttc-aaaattaggcaagtacaatatgagaaaagatgattacaggcaaatcacaattacaattgttgatgtaaacatcttaaactaattattaacaaagaaaattcagcaaactatacaaacataatgaatcattcccaggctcattttatcatagcaaaccaagttgaattcaatctcaaataagaaaagactttcacaaaatgcattacattaacagatagaggc-aagaaacacatgagaatattcataagatggaggaaaaacattcaataaatttcatcatgcattcatgataagatgtcacttattgaactaagaatagaaggtaatatcacgtcctgataaggtgaacctatgaaatacatacaatgtctattttggaaagtagtgaaatgttagaagcactccattaacattataaatagcacaa---tacccattacaggta--ttaccatatctattcagtatttcacagggggtcctaacaaatgcagtaagaatattaaaaacttataaaattagaaagaa---aatataattcttagtaattacatgttaccaaaccatatacataaatatctccaaagagtttacaggcaaattgttgaattaggaagaagatttaataaggtccct-gaaacaatataaatacacaaaaataaactgtattttctgtatactaggaagagttagaacatataattaacaataaatataatccacggtaataacaatatataaagtgctctgacttaaatctacc-aaaggactaccaagta--ttaaataaaaggagacgcataccatgcccatgaatagggactaattaatgtaaagatgtcaactctcccaaaactgatacaatgcatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaacaaagtcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtagtaataaagacagtgtggta---ttgtcattgatgtaatcaaatttgccagtggaatagaagagaaagccca-aagtagcctcctacaaaatacagagacttgatatttggtagagATGGCATTGAAGGTTAGTGGAG-----AAAAAAACAAAC--AA-AA-AACATGATTATTCAATCTTTTTAGTTTAGGACAATAGGTTATTCATACC---AAATAAAAGTCAGAA------TAGAGACAACAATTAATATAAAGTAGATTAAATACTTATATATGAAAGACAAAATCtgtggcagatggactgtaatatga----cccccaaattatccccatctcctggtacttatg-------------------ccttcgtgtagccccttccttctgagtatggatgggacctctgacgtgctttcaaccattagaatgcagcaactatgatggg-tgtcactttcataatttatgctacattgttggcagagtttctctattgactgtcttcctggctttaatgaagcaagctgctat--acggagaggtccacatgg-aagctactaaaggcggaccccaggtaacaaccagaaaagtactgaagctttaggtccaacaatctataaggtactgaatcctgccaacaatcatgtgagcttggaagcacatgcttccccagttgagtctcagatgagattgcagccctagccagaaacttaattgcagctttgtgaaacaccctaaagcagagtacccaactaagtcatg-gttgactcctgacctacagaaactgtgggataatcaatgcatgttgt-ttcaagccactaggtttctggtaatattgttaggcagcaataaata---attT------------------------T--AAAAAA-----TGCTtaggag-aaaatataggagaacatttttagggcc-aacatcttggggaaaaaattttagtaagatgcaaaaacagtacacataataaaagaaaacactgacatgtgtgattactttcaaattaagaacacctgtatatct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5391628 2247 + 17472758 aaaaagacaaattcttaaaaccagaacttgccaaaacagacttacaaaataactatatgagctaaacagaataagtctataagcacaaaatacaattttacgcattgttaaaaagcttcccacaaagaaaatacaatggtcagacggctttacagataggttctaacgaacattctagcatt-aatcatttcgatcttatgcaaactcttctaaagaacataaaaatgaaagatttccaacttattttat-tgacaagtataatgctgacttc-aaaattaggcaagtacaat------aaaaaagattacaggcaaatcacaattacgattgttgatgtaaacatcttaaactaattattaacaaagaaaattcagcaaactatacaaatataatgaatcattcccaggctcattttatcatagcaaaccaagttgaatttaatctcaaataagaaaagactttcacaaaatgcattacattaacagataaaggc-aagaaacacatgagaatattcataagatggaggaaaaacattcagtaaatttcatcatgcattcatgataagatgtcacttaccgaactaagaatagaagggaatatcacgtcctgataaggtgaacctatgaaatacatacaatgtcctttttggaaagtagtgaaatgttagaagcactacattaacattataaatagcacaa---tacccattacaggta--ttaccatatctattcagtatttcacag-gggtcctaacaaacgcagtaagaatattaaaaagttataaaattagaaagaa---aatataatccttagtaattacatgttaccaaaccatatacataaatatctccaaagagtttacaggcaaattgttgaattagtaagaagatttaataaggtccct-gatacaatataaatacacaaaaataaactgtattttctgtatactaggaagagttggaacatataattaacaataaatataatccatggtaataacaatatataaagtgctctgacttaaatctacc-aaaggactaccaagta--ttaaataaaaggagatgcataccatgcccatgaatagggactaattaatgtaaagatgtcaactctcccaaaactgatacaatgcattgaaaattaaaatg---cattgttc--tttg---gttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaacaaaggcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgta--aataaagacagtgtggta---ttgtcattgatgtaatcaaatttgccagtggaatagaagagaaagccca-aagtagcctcctacaaaatacagagacttgatatttggtagagatggcattgaaggttagtgggg---aaaaaaAAACAAAC-AAA-AA-AACATGAGTATTCAATCTTTTTAGTTTAGGACAATAGGTTATTCATACG---AAATAAAAGTCAGAA------TAGAGACAACAATTAATATAAAGTAGATTAAATACTTATATATGAAAGACAAAATCtgtggcagatggactgtaatatga----cccccaaattatccccatctcctggtacttatg-------------------cctttgtgtagccccttccttctgagtatggatgggacctctgacgtgctttcaaccattagaatgcagcaactatgatggg-tgtcactttcataatttatgctacattgttggcagagtttctctactgactgtcttcctggctttaatgaagcaagctgctat--acggagaggtccacatgg-aagctagtaaaggcggaccccaggcaacaaccagaaaagtactgaagctttaggtccaacaatctatacggtactgaatcctgccaacaatcatgtgagcttggaagcacatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagctttgtgaaacaccctaaagcagagtacccaactaagtcatg-gttgactcctgacctacagaaactgtgggataatcagtgcatgttgt-ttcaagccactaggtttctggtaatattgttaggcagcaataaata---attT------------------------A--AAAAAA-----TGCTtaggag-aaaatataggagaacatttctagggcc-aacatcttggggaaaaaattttagtaagatgcaaaaacagtacacataataaaagaaaacactgacatgtgtgattactttcaaattaagaacacctgtatatct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139432093 2252 - 152096393 aaaaagacaaattcttaaaactacaacttgccaaaatagacttacaaaataactatatgagctaaatagaataagcctataagcacaaaatacaactttacacattgttaaaaagcttcccacaaagaaaatacaatggtcatatggctttacagataggttctaatgaatattctagtattaaatcattttgatcttatgcaaactcttctaaagaacataaaaatgaaagatttccaacttattttatgtgacaagtatcatgt-gacttc-aaaattaggcaactacaatatgagaaaagatgattacaggcaaatcacaattacaattgttgatgtaaacatcttaaactaattattaacaaagaaaattcagcaaactatacaaatataatgaatcattcccaggctcattttatcatagcaaaccaagttggatttaatctcagataagaaaagattttcacaaaatgcattacattaacagataaaggc-aagaaacacatgagaatcttcataagatggagggaaaacattcgataaatttcatcatgcactcatgataagatgtcacttatcaaactaggaatagaagggaatatcacgtcctgataaggtgaacctatgaaatatacacaatgtcca-tttggaaagtagtgaaatattagaagcactccattaactttataaatagcacaa---tacccattacaggta--ttaccataactattcagtatttcacagggggtcctaacaaatgcagtaagaatattaaaaagttataaaattagaaagaa---aatataattcatagtaattacatgttaccaaaccatatacataaatatctccaaaaagtttgcaggcaaattgttgaattaataagacgatttaataaggtccct-gatacactatgaatacacaaaaataaactgtattttctgtatactaggaagagttagaacatataattgacaataaatataatccacagtaataacaaTATATAAAGTGCTCTGACTTAAATCTACC-AAAGGACTACCAAGTA--Ttaaataagaggagatgcataccatgcccatgaatagggactaattcatgtaaagatgtcaactctcccaaaactgatacaatgcatttacaattaaaacg---cattgttc--ttt----gttttgagtaaatgtgcaaactaattccaaaatgcatgtgtaagaacaaaggcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtagtaataaagacagtgtggta---ttgtcattgatgtaatcaaattttccagtggaatagaagagaaagccca-aagtagcctcctacaaaatatagagacttaatatttggtagagacggcactgaaggttagcgggcaaaaaaAAAAAACAAAC--AA-AA-AACACGATTATTCAATCTTTTTAGTTTAGGACAATAGGTTATTCATACA---AAA-AAAAGTCAGAA------TAGAGACAACAATTAATATAAAGTAGATTAAATACTTACATATGAAAGACAAAATCtgtggcagatggactgtaacatga----cccccaaattatccccatctcctggtacttatg-------------------cctttgtgtagccccttctctctgagtatggatgggacctctgatgtgctttcaaccattagaatgcagcaactatgatggg-tgtcactttcataatttatgctacattgttggcagagtttctctattgactgtcttcctggctttaatgaagcaagctgctat--acagagaggtccacatgg-aagctactaaaggtggaccctaggcaacaaccagaaaagtattgaagctttagatccaacaatctacaaggtacgaaatcctgccaacaatcatgtgagcttggaagcatatgcctccccagttgagtctcagatgagattgcagccctagccagcaacttaattgctgctttgagaaagaccctaaagcagagtacccaactaagtcatg-gttgattcctgacctatagaaactgtgggataatcaatgcatgttgt-ttcaagccactaggtttctggtaatattgttaggcagcaataaata---attT------------------------T--AAAAAA-----TGCTtaggag-aaaatat---agaacattttcagggcc-aacatctt-gggaaaaaattttagtaagatgcaaaaacagtgcacataataaaagaaaacactgacatatttgattactttcaaattaagaacacctgtgtatct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57382190 2234 + 70235451 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacggctttacagataggttctaacgaacattctagtattaaatcatttcaatcttatgcaaactcttctaaagaatataaaaatgaaagatttccaacttattttatgtgacaaatatcatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattacaattgtggctataaacatcttaaactaatcattaaccaagaatattcagcaaactatacaaatataatgaatcactcccaggctcattttatcatagcaaacaaagttggatttaatctcaaataagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacccatgagaatcttcagaagatggagggaaaacattcaataaa-ttcatcatgcattc---ataagatgtcacttatcaaactaggaatagaagggaatatcacatcctgataagatgaacctatgaaatacacacaatatccattttggaaagtagtgaaatattagaagcactccattaacattataaatagcacaa---tacccattacagcta--ttactgtatctattcagtatttcacagggggtcctaacaaatgcagtaagaatattaaaaagttataaaattagaaagaa---aatataactctcagtaattacatgttaccaaaccgtatacataaatatctccaaagagtttacaggcaaattgttgaattagtaa---gatttaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctacatactagcaagagttagaacatataattaacaataaatataatccacagtagtaacaaTATATAAAGTGCTCTGACTTAAATCTACC-AAAGGATTACCAAGTA--Ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcactgtaaagaggtcaactctcccaaaactgatataatgaatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtaataataaaga-agtgtggta---ttgtcatcgacgtaaacaaatttgccagtgggatagaagagaaagtcca-aagtagactcctacaaaatacagagacttgatatttggtagagatggcattgaaggttagtgggg-------------------gg--a-aaaacgattattcaatctttttagtttagggcaacaggttattcttaccaaaaaaaaaaagtcagaa------tagacacaacaattaatataaagtagattaaatacttataaatgaaagacaaaaTAtgtggcagacggactgtaatatgc----cccccaaattatccccatctcctggtacttatg-------------------cccttgtgtagccccctccttctgagtacagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggt-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctagctttaatgaagcaagctcctat--atggagaggtccacatgg-aagctactaaaggtggaccccaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactggatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcaactaagtcatgagttg-------acctacagaaactgtgggataatcaatgtacattgt-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------T--AAaaaa-----tgcttacgag-aaaacataggagaacatttttagggccaaatctcttgaggaaaaatttttagtaagatatggtaacagtatacataataaaggaaaacactgacatatttgattactttcaaattaataacacttgtatatct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63073596 2234 - 75711847 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacggctttacagataggttctaacgaacattctagtattaaatcatttcaatcttatgcaaactcttctaaagaatataaaaatgaaagatttccaacttattttatgtgacaaatatcatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattacaattgtggctataaacatcttaaactaatcattaaccaagaatattcagcaaactatacaaatataatgaatcactcccaggctcattttatcatagcaaacaaagttggatttaatctcaaataagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacccatgagaatcttcagaagatggagggaaaacattcaataaa-ttcatcatgcattc---ataagatgtcacttatcaaactaggaatagaagggaatatcacatcctgataagatgaacctatgaaatacacacaatatccattttggaaagtagtgaaatattagaagcactccattaacattataaatagcacaa---tacccattacagcta--ttactgtatctattcagtatttcacagggggtcctaacaaatgcagtaagaatattaaaaagttataaaattagaaagaa---aatataactctcagtaattacatgttaccaaaccgtatacataaatatctccaaagagtttacaggcaaattgttgaattagtaa---gatttaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctacatactagcaagagttagaacatataattaacaataaatataatccacagtagtaacaaTATATAAAGTGCTCTGACTTAAATCTACC-AAAGGATTACCAAGTA--Ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcactgtaaagaggtcaactctcccaaaactgatataatgaatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtaataataaaga-agtgtggta---ttgtcatcgacgtaaacaaatttgccagtgggatagaagagaaagtcca-aagtagactcctacaaaatacagagacttgatatttggtagagatggcattgaaggttagtgggg-------------------gg--a-aaaacgattattcaatctttttagtttagggcaacaggttattcttaccaaaaaaaaaaagtcagaa------tagacacaacaattaatataaagtagattaaatacttataaatgaaagacaaaaTAtgtggcagacggactgtaatatgc----cccccaaattatccccatctcctggtacttatg-------------------cccttgtgtagccccctccttctgagtacagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggt-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctagctttaatgaagcaagctcctat--atggagaggtccacatgg-aagctactaaaggtggaccccaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactggatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcaactaagtcatgagttg-------acctacagaaactgtgggataatcaatgtacattgt-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------T--AAAAAA-----TGCTTACGag-aaaacataggagaacatttttagggccaaatctcttgaggaaaaatttttagtaagatatggtaacagtatacataataaaggaaaacactgacatatttgattactttcaaattaataacacttgtatatct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13632801 2220 - 18804593 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacggctttacagataggttctaacgaacattctagtattaaatcatttcaatcttatgcaaactcttctaaagaatataaaaatgaaagatttccaacttattttatgtgacaaatatcatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattacaattgtggctataaatatcttaaactaatcattaacaaagaatattcagcaaactatacaaatataatgaatcacttccaggctcattttatcatagcaaacaaagttggatttaatctcaaataagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacccatgagaatcttcagaagatggagggaaaacattcaataaa-ttcatcatgcattc---ataagatgtcacttatcaaactaggaatagaagggaatatcacatcctgataagatgaacctatgaaatacacacaatatccattttggaaagtagtgaaatattagaagcactccattaacattataaatagcacaa---tacccattacagcta--ttactgtatctattcagtatttcacagggggtcctaacaaatgcagtaagaatattcaaaagttataaaattagaaagaa---aatataactctcagtaattacatgttaccaaaccgtatacataaatatctccaaagagtttacaggcaaattgttgaattagtaa---gatctaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctacatactagcaagagttagaacatataattaacaataaatataatccacagtagtaacaatatataaagtgctctgacttaaatctacc-aaaggattaccaagta--ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcactgtaaagaggtcaactctcccaaaactgatataatgaatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagattcatcttgccagatttcaaggctaacaataagactgtaataataaaga-agtgtggta---ttgtcatcgacgtaaacaaatttgccagtgggatagaagagaaagtcca-aagtagactcctacaaaatacagagacttgat-tttggtagagatggcattgaaggttagtgggg-------------------gg--a-aaaacaattattcaatctttttagtttagggcaacaggttattcttacc-aaaaaaaaaagtcagaa------tagacacaacaattaatataaagtagattaaatacttataaatgaaagacaaaaTAtgtggcagacggactgtaatatgc----cccccaaattatccccatctcctggtacttatg-------------------cccttgtgtagccccctccttctgagtacagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggt-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctagctttaatgaagcaagctcctat--gtggagaggtccacatgg-aagctactaaaggtggaccccaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactggatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcaactaagtcatgagttg-------acctacagaaactgtgggataatcaatgtacattgt-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------T--AAaaaa-----tgcttacgag-aaaacataggagaacatttttagggccaaatctcttgaggaaaaatttttagtaagatatggtaacagtatacataataaaggaaaacactgacatatttgattactttcaaat------------tatatct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13244619 2232 + 18905526 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacggctttacagataggttctaacgaacattctagtattaaatcatttcaatcttatgcaaactcttctaaagaatataaaaatgaaagatttccaacttattttatgtgacaaatatcatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattacaattgtggctataaacatcttaaactaatcattaacaaagaatattcagcaaactatacaaatataatgaatcactcccaggctcattttatcatagcaaacaaagttggatttaatctcaaataagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacccatgagaatcttcataagatggaggaaaaacattcaataaa-ttcatcatgcattc---ataagatgtcacttatcaaactaggaatagaagggaatatcacatcctgataaaatgaacctatgaaatacacacaatatccattttggaaagtagtgaaatattagaagcactccattaacattataaatagcacaa---tacccattacagcta--ttactgtatctattcagtatttcacagggggtactaacaaatgcagt---aatattaaaaagttataaaattagaaagaa---aatataactctcagtaattacatgttaccaaaccgtatacataaatatctccaaagagtttacaggcaaattgttgaattagtaa---gatttaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctatatactagcaagagttagaacacataataaacaataaatataatccacagtagtaacaatatataaagtgctctgacttaaatctacc-aaaggattaccaagta--ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcactgtaaagaggtcaactctcccaaaactgatacaatgaatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgtatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtaataataaaga-agtgtggta---ttgtcatcgacgtaaacaaatttgccagtgggatagaagagaaagtcca-aagtagactcctacaaaatacagagacttgatatttggtagagatggcattaaaggttagtgggg-------------------ggaaa-aaaacgattattcaatctttttagtttagggcaataggttattcttacc-aaaaaaaaaagtcagaa------tagacacaacaattaatataaagtagattaaatacttataaatgaaagacaaaaTAtgtggcagagggactgtaatatgc----cccccaaattatccccatctcctggtgcttatg-------------------cccttgtgtagccccctccttctgagtacagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggt-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctagctttaatgaagcaagctcctat--atggagaggttcacatgg-aagctactaaaggcagaccccaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactgaatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcaactaagtcatgagttg-------acctacagaaactgtgggataatcaatgtacattgt-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------T--AAaaaa-----tgcttatgag-aaaacataggggaacatttttagggccaaatctcttggggaaaaatttttagtaagatatggtaacagtatacataataaaggaaaacactgacatatttgattactttcaaattaataacacttgtatatct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60072925 2235 - 72318688 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacggctttacagataggttctaacgaacattctagtattaaatcatttcaatcttatgcaaactcttctaaagaatataaaaatgaacgatttccaactcattttatgtgacaaatatcatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattacaattgtggctataaacatcttaaactaaacattaacaaagaatattcagcaaactatacaaatataatgaatcactcccaggctcattttatcatagcaaacaaagttggatttaatctcaaataagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacccatgagaatcttcataagatggaggaaaaacattcaataaa-ttcatcatgcattc---ataagatgtcacttatcaaactaggaatagaagggaatatcacatcctgataagatgaacctatgaaatacacacaatatccattttggaaagtagtgaaatattagaagcactccattaacattataaatagcacaa---tacccattacagcta--ttactgtatctattcagtatttcacagggggccctaacaaatgcagtaagaatattaaaaagttataaaattagaaagaa---aatataactctcagtaattacatgttaccaaaccgtatacataaatatctccaaagagtttacaggcaaattgttgaattagtaa---gatttaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctatatactagcaagagttagaacatataattaacaataaatataatccacagtagtaacaaTATATAAAGTGCTCTGACTTAAATCTACC-AAAGGATTACCAAGTA--Ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcactgtaaagaggtcaactctcccaaaactgatacaatgaatttaaaattaaaatg---tattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgttataataaaga-agtgtggta---ttgttgtcgacgtaaacaaatttgccagtgggatagaagagaaagtcca-aagtagactcctacaaaatacagagacttgatatttggtagagatggcactgaaggttagtggga-------------------gg-aa-aaaacgattattcaatctttttagtttagggcaataggttattcttaccaaaaaaaaaaagtcagaa------tagacacaacaattaatataaagtagattaaatacttataaatgaaagacaaaaTAtgtggcagacggactgtaatatgc----cccccaaattatccccatctcctggtacttatg-------------------cccttgtgtagccccctccttctgagtacagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggc-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctagctttaatgaagcaagttcctat--atggagaggtccacatgg-aagctactaaaggcggaccccaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactgaatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcaactaagtcatgagttg-------acctacagaaactgtgggataatcaatgtacattct-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------T--AAAAAA-----TGCTTATGag-aaaacataggagaacatttttagggccaaatctcttggggaaaaatttttagtaagatatggtaacagtatacataataaaggaaaacactgacatatttgattactttcaaattaataacacttgtatatct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 409990 2231 - 1517660 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacggctttacagataggttctaacgaacattctagtattaaatcatttcaatcttatgcatattcttctaaagaatataaaaatgaaagatttccaacttattttatgtgacaaatatcatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattacaattgtggctataaacatcttaaactaatcattaacaaagaatattcagcaaactatacaaatataatgaatcactcccaggctcattttatcatagcaaacaaagttggatttaatctcaaataagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacccatgagaatcttcataagatggaggaaaaacattcaataaa-ttcatcatgcattc---ataagatgtcacttatcaaactaggaatagaagggaatatcacatcctgataaaatgaacctatgaaatacacacaagatccattttggaaagtagtgaaatattagaagcactccattaacatcataaatagcacaa---tacccattacagcta--ttactgtatctattcagtatttcacagggggtactaacaaatgcagt---aatattaaaaagttataaaattagaaagaa---aatataactctcagtaattacatgttaccaaaccgtatacataaatatctccaaagagtttacaggcaaattgttgaattagtaa---gatttaataaggtccct-gatacaatataaatatacaaaaataaactgcattttctatatactagcaagagttagaacatataattaacaataaatataatccacagtagtaacaaTATATAAAGTGCTCTGACTTAAATCTACC-AAAGGATTACCAAGTA--Ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcactgtaaagaggtcaactctcccaaaactgatacaatgaatttaaaattaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagactcatcttgccagatttcaaggctaacaataagactgtaataataaaga-agtgtggta---ttgtcatcgatgtaaacaaatttgccagtgggatagaagaggaagtcca-aagtagactcctacaaaatacagagacttgatacttggtagagatggcattaaaggttagtgggg-------------------gg-aa-aaaacgattattcagtctttttagtttagggcaataggttattcttacc-aaaaaaaaaagtcagaa------tagacacaacaattaatataaagtagattaaatacttataaatgaaagacaaaaTAtgtggcagagggactgtaatatgc----cccccaaattatccccatctcctggtgcttatg-------------------cccttgtgtagccccctccttctgagtacagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggt-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctagctttaatgaagcaagctcctat--atggagaggtccacatgg-aagctactaaaggcaggccccaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactgaatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctagccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcaactaagtcatgagttg-------acctacagaaactgtgggataatcaatgtacattgt-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------T--AAaaaa-----tgcttatgag-aaaacataggagaacatttttagggccaaatctcttggggaaaaatttttagtaagatatggtaacagtatacataataaaggaaaacactgacatatttgattactttcaaattaataacacttgtatatct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3506107 2233 + 6513552 aaaaagacaaattcttaaaactacaacttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttacactttgttaaaaagcttcccacaaacaaaatacaatggtcagacgactttacagataagttctaatgaacattctagtattaaatcatttcaatcttatgcaaactcttctaaagaatataaaaatgaaagatttccaacttattttatgtgacaaat---atgttgacttc-aaaattaggcaagtacagtatgagaaaagacgattacaggcaaatcacaattacaattgtagatataaacatcttaaactaatcattaacaaagaatattcagcaaactatacaaatataatgaatcactcccaggctcattttatcatagcaaacaaagttggatttaatctcaaacaagaaaagattttcacataatgcattacattaacagataaaggc-aagaaacacataagaatcttcataagatggaggaaaaacattcaataaa-ttcttcatgcattc---acaagatgtcacttactaaattgggaatagaagggaatatcacatcctgagaagatgaacctatgaaatacacacactatccattttggaaagtagtaaaatattagaagcactccattaacattataaatagcacaa---tatccattacagcta--ttatcgtatctattcagtatttcacagggggtcctaacaaatgcagtaagaatattaaaaagttataaaattagaaagaa---aatataattctcagtaattaaatgttaccaaaccgtatacataaatatttccaaagagtttacaggcaaattgttgaattagtaa---gatttaataaggtccct-gatacaatataaatacacaaaaataaacttcattttctatatgctagcaagagttagaacatataattaacaataaatataatccacagtagtaacaaTATATAAAGTGCTCTGACTTAAATCTACC-AAAGGATTACCAAGTA--Ttaaataaaaggagacgaataccatgcccatgaatagtgactaatcaatgtaaagaggtcaactctcccaaaactgatacaatgaatttaaaatgaaaatg---cattgttc--tttgtttgttttgagtaaatgtgcaaactaattctaaaatgcatatgtaagaagaaaggcttaagaaaatccaagacaac-------aatgagaag---gaaaataaagactcatcttgccagttttcaaggctaacaataagactgtaataataaaga-agtgtggta---ttgtcattgacataaacaaatttgccattgggatagaagggaaagtcca-aagtagactcctacaaaatacagagaattgatatttggtagagatggcattgaaggttagtgggg-------------------gg-aa-aaaatgattattcaatctttttagtttaggacaataggttattcttac--aaaaaaaaaAGTCAGAA------TAGACACAACAATTAATA-----TAGATTAAATACTTATAAATGAAGCACAAAATCtgtggcagatggactgtaatatgc----cccccaaattatccccatctcctggtacttatg-------------------cccttgtatagccccttccttctgagtatagatgggacctatgactttctttcaaccattagaatgcagcaactatgatggc-tgccactttcataatttatgctacattgttggcagagtttctctattgattctcttcctggctttaatgaagcaagctcctat--atggagaggtccacatgg-aagctactacaggcggacctcaggcaacaatcagaaaagtactgaagctttaggtccaacaatctacaaggtactgaatcctgccaacaatca-gtgagcttggaagcatatgcttccccagttgagtctcagatgagattgcagccctggccagcaacttaattgcagccttgtgaaagaccctaaagcagagtactcgactaagtcatg-gttgattcctcacctacagaaactgtggaataatcaatgtacattgt-ttcaagccactaggtttctggtaatattgttaggcagcaatacata---attT------------------------TAAAAAAaa-----agcttatgag-aagacataggagaacatttttagggccaaatctcttggggaaaaatttttagtaagatgtgataacagtatacataataaaggaaaacactgatatatttgattactttcaaattaataacacttgtatatct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105275901 2232 + 117903854 aaaaagacaaattcttaaaactacagcttgccaaaacagacttacaaaataactatgtgagctaagtacaataagcctataagcacaaaatacaattttataca----taaatatcttcccacaaacaaaatacaatggtcagatgactttacctataggttctaatgaacattctagtattaattcattttaattttatgtaaactcttctaaagaacataaaaatggaagatttccaacttattttatgtgacaagtataatgttgacttc-aaaattacgcaagtacaatatgagaaacgatgattacaggcaaatcacaattataattgttgatgtaaacatcttaaacgaattattaacaaagaaaattcagcaaactatacaaataaaacaaatcattcccaggctcattttatcacagcaaacaaagttcgactgaatctcaaataaggaaagagttttacataatgtattacattaactgataaaagc-aagaaacacatgagaatcttcataagataaagcaaaaacattgaataaatttcatcatgcattcaggataaaatgtcatgtatcaaactaggaatagaagggaatatcacaccctgatcaggtaaacctatgaaatacacataacatccattttggaaagcagtgaaatgttagaagcactctattaacattataaatagtacaagactatccattacaaata--ttaccatatctatttagtatttcatagggggtcctaacaaac---gtaagaatattaaaaagttataaaattagaaagaaggcaatatattttttagtaattacacattaccaaactacatccataaatatctccaaagagtttacaggcaaattgttgaattaataagaagatttaataaggtccctggatacaatataaatacacaaaaataaactacattttctatatactagcaaaagttacaacatataactaaaaataaacataattcacagtaataacaatatataaagtgctttgacttaaatctactaaaaaaattgccaagta--ttaaataaaaggagacgcatgccatgcccat-------------------tagagaggtcaactctcccaaaactcatacaatgcacttaaaattaaaatg---cattgttaa-tttgtttgttttgaggaactgtg-aaactaatcataaaatgcatatggatgaacgaaggcttaagaaaatctcaagaaaatttctttcttgagaaa---gaaaat--agactcatcttgccagatttcaaggttaac---aagactacagtaataaagacagtgtgata---tcatcattgatgtcatcaaatttgtcaacagaatccaagagaaagccca-aaaaggactcctacaaaatacagagacatgatatttggtagggatggcattgaagattagtggga-------------------aa-aataaaaagattattcaatcttttcaatttaagacaataggttattcataca---tgaaaaaagtcagaa------tagacacaataattaatataaagtagattaaatacttatatatgaaagacaaaaTCtgtggcagatggactataatatga--cacccaaaaattatccccatctcctggtattaatg-------------------cccttatgtagcccattcctgctgtgtataggtgggacctgtgacttgctttcaaccaatagaatgctgcaaagatgatggggtgtcactttcataatttaggctacattgcaggcagagtttctctactgactctcttcctggctttaatgaagcaagctgcgat--acagagaggtccacatggtaagctactgaaggcagaacccaggcaacaaccagaaaagtactgaagctttaggtccaacaatctataagatattgaatcttggtgacaatcatgtgagcttggaagcatatgcttccccagttgagtctcagatgacattgtagccctagccagcaacttaactgcagccttgtgaaagaccataaaccagaatacccaattaagtcatg-attgattcctgacccacagaaactgtgagataattaaaatatgttgt-ttcaagccactaggtttctgataatattgttaggcagtaataaata---aGTT------------------------T--AAaaag-----tgcttaggag-aaaatataggaaaagatttttagggcc-aacatcttggggaaaattttttagtaagatgcaaaaacagtataaataataaagg-aa--actaacatatttgattactttcaaattaagaacatccatatatct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19463628 2215 - 31320352 aaaaaggcaaattcttaaaactacagtttgtcaaaacagacttacaaaataactatgtgggctaaatagaataagcctataagcaagaaatacaattttatacatagttaaaaattttccctcaaacaaaatacaatggtcagatgactttaccaataggttctaatgaacattctagtattaaatcattttaatcttatgcaaattcttctaaagaacataaaaatggaagatttccaacttattttatgtgacaagtataatgttggcttc-aaaattaggcaagtacaatatgagaaaagacgattacagacaaatcacaattatcattgttgatgtaaacatcttaaatgaattattaacagagaaaattcagcaaactatacaaataaaacgaattattcccaggctcattttatcatagcaaacaaagttcgactgaatctcaaataaggaaagagttttacataatgtattacattaactgataaaggc-aagaaacacatgagaatcttcataagattaagcaaaaacattcaataaatttcatcatgcattcaggataaaatgtcatgtatcaaactaggaatagaagggaatatcacat----atcaggtaaacctatgaaatacacacaacatccattttggaaagcagtgaaatgttagcagcactctattaacattataaatagtacaagactacccattacaaata--ttaccatatctattcagtatttcatagggggtcctaacaaat---gtaagaatattaaaaagttataaaattagaaagaaggaaatataattctcagtaattacacattaccgaaccatatacataaatatctccaaagagtttacaggcaaattgttgaattaataagaagatttaataagttccct-gatgtaatataaatacacaaaaataaactgcatttt-------ctagcaagagttacaacatataactaaaaataaacataattcacagtaataacaatatataaagtgctttgacttaaatctact-aaaaaattaccaggta--ttaaattaaaagagacacatgccattcccat-------------------taaagaggtcaactctcccaaaactcatataatgcacttaaaattaaaatg---cattgttct-tttgtttgttttgaggaactgtgaaaactaattataaaatgcatatggatgaacaacggcttaagaaaatccaagacaaa-------aatgagaaa---gaaaataaagactcatcttgccagattttaaggctaac---aagactacagtaataaagacagtgtgata---tcatcattgatgtaatcaaatttgccagcagaatagaagagaaagccca-aaaaggactcttacacaatacagagacatgatatttggtggagatggcattgaagattagtggga-------------------aa-aa-aaaaagattattcaatcttttcaatttaggacaatagattattcataca---ggaaaaaaGTCAGAA------TAGACAGGATAATTAATATAAAGTAGATTAAATACTTATATATGAAAGACAAAATCTGTGGCTAATGGACTGTAATATCACCCCCccccaaactatccccatctcctggtattaatg-------------------tccttatgtagcccattccttctgcatataggtgggacctgtgacttgctttcaaccaatagaatgctgcaaagatgatggcatgtcactttcataatttaggctacattgtaggcagagtttctctattgaccctcttcctggctttaaggaagcaagctgctat--acagagaggtccacatggtaagctactaaaggcggaccccaggcaacaaccagaaaagtactgaagcatcaggtccaacaatctataagatactgaatcctgctgacaatcatgtgagcttggaagcatatgcttccccagttgagtctcagatgacattgcagccctagccagcaacttaattgcagccttgtgaaagaccataaaccagagtatccaattaagtcatg-attgattcctgacccatagaaactgtgagataattaaaatatgttgt-ttcaagccactaggtttctgaaaatattgtt----agcaataaata---aGTT------------------------T--AAAAAG-----TGCTCaggag-aaaatataggaaaagatttttagggcc-aacatcttggggaaaa-tttttagtaagatgcaaaaaca-tataaataataaaggaaa--actgacatatttgattactttcaaattaagaacatctgtatatct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1659127 2227 + 2203405 aaaaagacaaattcttaaaactacagattgccaaaacagacttac-aaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttatacatagttaaaaatcttccctcaaacaaaatacaatggtcagatgactttaccaataggttctaatgaacattctagtattaaatcattttaatcttatgcaaattcttctaaagaacataaaaatggaagatttccaacttattttatgtgacaagtataatgttgacttc-aaaattaggcaagtacaatatgagaaaagacaattacaggcaaatcacaattataattgctgatgtaaacatcttaaacgaattattaacagagaaaattcagcaaactacacaaataaaatgaatcattcccaggctcattttatcatagcaaacaaatttcgattgaatctcaaataaggaaagagttttacataatgtattacattaactgataaaggc-aagaaacacatgagaatcttcataagattaagcaaaaacattcaataaatttcatcatgcattcaggataaaatgtcacatatcaaactaggaatagaa-gaaatatcacattctgatcaggtaaacctatgaaatacacacaacatccattttgaaaagcagtgaaatgttagaagcactctattaacattataaatagtacaagactacccattacaaata--ttatcatatctattcagtatttcatagggggtcctaacaaat---gtaagaatattaaaaagttataaaatcagaaagagggaaatataattctcagtaattacatggtaccaaatcatatacataaatatctccaaagagtttacaggcaaattgttgaattaataagaagatttaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctatatactagcaagaattacaacatataactaaaaataaacataattcacagtaataaca--atataaagtgctttgacttaaatctact-aaaaaatTACCAAGTA--TTAAATTAAAGGAGACGCATGCCATGCCCAT-------------------taaagacatcaactctcccaaaactcatacaatgcacttaaaattaaaatg---cattgttat-tttgtttgttttgaggaactgtgaaaactaattataaaatgcatatggatgaacgaaggcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaac---aagactacagtaataaagacagtgggata---tcatcattgatgtaatcaaatttgccagcagaatagaagagaaagccca-aaaaggactcctacaaattacagagacatgatatttggtagagatggcattgaagattagtgggg-------------------ga-aaaaaaaagattattcaattttttcaattaaggacaataggttattcataca---ggaaaaaagtcagaa------tagacacaataattaatataaagtagattaaatacttatatatgaaagacaaaaTCtgtggcagatggactgtaatatga---cccccaaaattatccccatctcctggtattaatg-------------------cccttatgtagctcattccttctgcatataggtgggacctgtgacttgctttcaaccaatagaatgctgcaaagatgatggcgtgtcactttcataatttaggctacattgtaggcagagtttctctattgactctcttcctggctttaagggagcaagctgctat--actgagaggtccatatggtaagctactaaaggcggaccccaggcaacaacgagaaaagtactgaagctttaggtccaacaatctataaaatactgaatcctgctgacaatcatgtaagcttggaagcatatgcttccccagttgagtctcaggtgacactgcagccctagccagcaacttaattgcagccttgtgaaagaccataagccagagtacccaattaagtcatg-attgatccctgacccatagaaactgtgagatatttaaaatatgttgt-ttcaagccactaggtttctgataatattgttaggcagcaataagta---aGTT------------------------T--AAaaag-----tgcttaggagaaaaatataggaaaagatttttagggcc-aacatcttggggaaaattttttagtaagatgcaaaaacagtataaataataaaggaaa--actgacatatttgattactttcaaattaagaacatctgtatatct i cebCap1.NW_016107689v1 C 0 I 263 s aotNan1.NW_018502140v1 3611070 2254 - 14941987 aaaaagacaaattcttaaaactacagcttgccaaaacagacttacaaaataactatgtgagctaaatagaataagcctataagcacaaaatacaattttatacatagttaaaaatcttcccacaaacaaaatacaatggtcagatgactttaccaataggttctaatgaacattctagtattaaatcatttcaatattatgcaaactcatccaaagaacataaaaatggaagatttccaacttattttatgtgacaagtataatgttgacttc-aaaattaggcaagtacaatatgagaaaagatgattacaggcaaatcacaattataattgttgatgtaaacatcttaaacgaattattaacaaagaaaattcagcaaactatacaaataaaacaaatcattcccaggctcattttatcatagcaaacaaagtttgattgaatctcaaataaggaaagagttttacataatgtattacattaactgataaaggc-aaaaaacacatgagaatcttcataagatgaagcaaaaacattcaataaatttcatcatgcattcaggataaaatgtcacatatcaaactagcaatagaagagaatatcacatcctgatcatgtaaacatatgaaatacacacagcatccattttggaaaggagtgaaatgttagaagcactctattaacattataaatagtacaagactacccattacaaata--ttaccgtatctattcagtatttcatagacggtcctaacaaat---gtaagaatattaaaaagttataaaattagaaagaaggaaatataattctcagtaattacacattaccaaaccatgtacataaatatctcc-aagagtttacaggcaaattgttgaattaataagaagatttaataaggtccct-gatacaatataaatacacaaaaataaactgcattttctatatactagcaagagttacaacatattactaaaaataaacataattcacagtaattacaatatataaagtgctttgacttaaatctact-aaaaaatTACCAAGTA--TTAAATAAAAGGAGACTCATGCCATGCCCAT-------------------taaagaggtcaactctcccaaaactcatacaatgcacttaaaattaaaatg---cattgttct-tttgtttgttttgaggaactgtgaaaactaattataaaatgcatatggatgaacaaaggcttaagaaaatccaagacaac-------aatgagaaa---gaaaataaagactcatcttgccagatttcaaggctaac---aagactacagtaataaagacagcgtgata---tcatcattgatgtaatcaaatttgccagcagaatagaagagaaagccaa-aaaaggactcctacaaaatacagagacatgatatttggtagagatggcattgaagattagtgggg-------------------ga-aaaaaaaagattattcaatcttttcaatttaggacaataggttattcataca---ggaaaaaagtcagaa------tagatataataattaatataaagtagattaaatacttatatatgaaagacaaaaTCtgtggcagatggactgtaatatga--cccctcaaaatcatccccatctcctggtattaacg-------------------cccttatgtagcccattccttctgcgtataggtgggacctgtgacttgctttcaaccaatagaatgctgcaaagatgacggggtgtcactttcataatttaggctacattgtaggcagagtttctctattgactctcttcctggctttaatgaagcaagctgctat--aaagagaggtccacatggtaagctactaaaggcggaccccaggcaacaaccagaaaagtactgaagctttaggttcaacaatctataagatactgaatcctgctgacaatcatgtgagcttggaagcatatgattccccagttgagtctcagatgacattgcagccctagccagcaacttaattgcagccttgtgaaagaccataaaccagagtacccaattaagtcatg-attgattcctgacccacagaaactgtgatataattaaaatatggtgt-ttcaagccactaggtttctgataatattgttaggcagtaataaata---aGTTTTATTTATTATTTCTCCTaagcaat--aaaaaa-----tgcttaggag-aaaatacaggaaaatatttttagggcc-aacatcttggggaaaattttttagtaagatgcaaaaacagtataaataataaaggaaa--actgacatatttgattactttcaaattaagaacatctgtatatct i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11238373 2217 - 20685099 aaaaggataaactctttaa-----aacttgcccaaaaaagactacaaaataacaatgtgaggta-----aataattctacgagaatcaaataaaattttacatatagtcaaaactcttccccaaaagaaaacacaatggtgcaatgatttcatacatgaattctaatgaacatttgagtactagatcactacggtcttacacaaactc-tgtaaagaacatacaaatagaatatttcaca-----tttatacaacaaataaaattttgactttaaaaatcagagaagtacagtatgagagtagaatatcatgtgcaaatcaaaagtataaatgttgatgtaaacatctcaaactagttattaacaaatataaccc--------------atacaatGAATCACTCCAAGACTGGTTTCATCACAGTAAACCAAACTGAATTTAATCTC-----AGAAAAGATTttcacat-----------------gataaaggcaaaggattatataactatctcagtaaaat------aagacattcagtatatctcatcatggattcacgataa-atgtttcttatcaaactcgcaaaagaagggaataccatatcatgataggacatacctaagaaatacataggacatccactttgt-aagtag-ggaattttagaagcactctattaacacaaggactatcaaaagaacaaccaatccaggtattttaccaaatcccttactta-ttcacaggag--cttcacaagtgcagcaagaatattaaaaatttataaagttagaaagaagaaaatataatttttactaattacgtactacagaaccatatacataattatttccaaggaatttaaaagtaaactactgaattatcaagaagatttattaaggtccct-gatacaatacaaatagacaaaaatcaattgcattttctatgtgctagtgacagttagaacatataattaaaaataaatatcatccactgtaacaacaaaatataaagtgctctgactgaaatctacc-aataaattaacaagtattttgaatgaaaggagaggcatatcatgcccatgaataaggaataatcaatgtaaagaggtcaattctccc-aaacccatgcaacgcatttacaattaaaatgtttcactattttatttgtttgttttgaggaatagtgcaaa-taagtctaaaatgcacatggaaaaaccatagcttacg---gttcaaaatgat-------aattagaaagaggaaaataaagatttgccttgccagacttcatgactaacaataaaactacagtaattaagactgagtggtatatttatcattggcattataaaatttgctagtagaatagaatagagggcccagaagcaggcttatacaggatagaaagacttgat--ttggtagagacagtactgaagggcagcggga----------------------aa-gaaaaggttattcagtcttttcagtttagaacaataggttatacctacagaaaaaaaaaaaaaaaaactcatgcagacacaacaattaatatgaaacagtttaaacatttaaatatgaaaCTGAAAATCtgtggcaggtgaatttaaaaatgg----ccccc-aattattttcatatcttattattcaaggataatctttctaataagattcatgtgtaatctcttcctcttgtgtgtgggtgggtttggtgactggcttgttatgagcagaacactgcaatgataatggg-tgtcacttttgtaa-ttacagtgaattgttagcagaacttctt---------tcttcctggctttaaggacgtaagttgctattggtggggagggcaacaaat-aaactactgatggtggcctccaggcatcagccatcaaaaaatttagacttttgctccaacagcctacgaggaactaaatgctgtcaacaaccatgtgagcttggaaacatattcttccccagttgagtctcagatgaggttgctacctttggcaacagcataatcacagcctagtgaaagacactaaagcataaaact-gactaagctgtg-gcttattcacgacagaca-aatctatgagattataaatgtgtgttttctttaagccactaagtttatggtaatatggtcaggcagcaatagacatctaTTt------------------------a--aaaaaataaagtgctgagaag-aaaatata--agagtatttttaggcac-a----cttacagaaaaagttttagaaaatctttgtacttgtataaataataagggaaaacactgacatatttgattaccttgagattaagaacatccgagtatct i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=4253393.000000 s hg38.chr18_GL383571v1_alt 145294 420 + 198278 -aaagctatcacaagggtcattatacaaaaatcaag--aacataagccaaaaagttattcaaaat-acatataaacaaaataggattagtattcataata-----tatagtaaactttagtgagtcaataaaaaat------aactgaatagaaaaa--ggggtaaaagaAATGACCCCAATTTCATTCCAGAAAAGAAACACACATGGCAAAAATAAAGGCTATATATGTGAGTTtgggtgggtgtgtgggtttggatgggtgggtgggtATAAGTGTACAGGTGC-ACACACACTTGTGTTTATAAGTTCTAAGtcattattagtcagagaaatgtaaatgaaaaccataaggtgacattcttttatcccaccagacacggaaatattaaaaattctgtaaatgtcaagtgc---agaagaaaatctag---cacagaaact s panTro5.chr18 65055321 422 + 78221452 -aaagctatcacaatggtcattatacaaaaatcaagaaaacataagccaaaaagttattcacaat-acacataaacaaaataggattagtattcataata-----tatagtaaactttagtgagtcaataaaaaat------aactgaatagaaaaa--gggataaaagaAATGACCCCAATTTCATTCCAGAAAAGAAACACACATGGCAAAAATAAAGGCTATAtgtgtgagtttgggtgggtgtgtgggtttggatgggtgggtgggtatatgtgtacatgtgc-acacacacttgtgtttataagttctaagtcattagtagtcagagaaatgtaaatgaaaaccataaggtgacattcttttatcccaccagacacggaaatattaaaaattctgtaaatgtcaagtgc---agaagaaaatctag---cacagaaact i panTro5.chr18 C 0 C 0 s panPan2.chr18 64174378 422 + 77229886 -aaagctatcacaatggtcattatacaaaaatcaagaaaacataagccaaaaagttattcacaat-acatataaacaaaataggattagtattcataata-----tatagtaaactttagtgagtcaataaaaaat------aactgaatagaaaaa--gggataaaagaAATGACCCCAATTTCATTCCAGAAAAGAAACACACATGGCAAAAATAAAGGCTATAtgtgtgagtttgggtgggtgtgtgggtttggatgggtgggtgggtatatgtgtACATGTGC-ACACACACTTGTGTTTATAAGTTCTAAGtcattagtagtcagagaaatgtaaatgaaaaccataaggtgacattcttttatcccaccagacacggaaatattaaaaattctgtaaatgtcaagtgc---agaagaaaatctag---cacagaaact i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5393875 422 + 17472758 -aaagctatcacaatggtcattatacaaaaatcaagaaaacataagccaaaaagttattcacaac-acatataaacaaaataggattagtattcataata-----tacagtaaactttagtgagtcaataaaaaat------aactgaatagaaaaa--ggggtaaaagaAATGACCCCAATTTCATTCCAGAAAAGAAACACACATGGCAAAAATAAAGGCTATAtgtgtgagtttgggtgggtgtgtgggtttggatgggtgggtgggtatatgtgtACATGTGC-ACACACACTTGTGTTTATAAGTTCTAAGtcattattagtcagagaaatgtaaatgaaaaccataaggtgacattcttttatcccaccagacacggaaatattaaaaattctgtaaatgtcaagtgc---ggaagaaaatctag---cacagaaact i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139434345 418 - 152096393 -aaagctatcacaatggtcactatacaaaaatcaagaaaacataagccaaaaagttattcacaat-acatataatcaaaacaggattagtattcataata-----catagtaaacttcagtgagtcaataaa----------aactgaatagaaaaa--ggggtaaaagaAATGACTCCAATTTCACTCCAGAAAAGAAACATACATGACAAAAATAAAGGCTATATGTGTGAGTTtgggtgggtgtgtgagtttggatgggtgggtgggtATATGTGtacatgtgc-acacacacttgtgtgtataagttctaagtcattactagtcagagaaatgtaaatgaaaaccataatgtgacattcttttatcccaccagacagggaaatattaaaaattctgtaaatgtcaagtgc---agaagaaaatccag---catagaaact i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57384424 418 + 70235451 -aaagctatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagcaagttaataaaaaat------aactgaatagaaaaa--ggggtaaaagaaatgacctcaatttcactccagagaagaaacacacatggTAAAAGTAAAGACTATATGTGCGAATTTGGGTGGGTGTGTGGGTTTGGATGGGTGGGT--GTATATGTGTACATGTGC-ACACACACTTGTGTGTat--gttctaagtcattactgatcagaggaatgtaaatgaaaaccataatgtaacattcttttatcccactagacaggaaaatattaaaaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaact i rheMac8.chr18 C 0 I 3 s macFas5.chr18 63075830 418 - 75711847 -aaagctatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagcaagttaataaaaaat------aactgaatagaaaaa--ggggtaaaagaaatgacctcaatttcactccagagaagaaacacacatggTAAAAGTAAAGACTATATGTGTGAATTtgggtgggtgtgtgggtttggatgggtgggt--gTATATGTGTACATGTGC-ACACACACTTGTGTGTGT--GTTCTAAGtcattactgatcagaggaatgtaaatgaaaaccataatgtaatattcttttatcccactagacaggaaaatattaaaaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaact i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13635021 418 - 18804593 -aaagctatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagcaagttaataaaaaat------aactgaatagaaaaa--ggggtaaaagaaatgacctcaatttcactccagagaagaaacacacatggTAAAAGTAAAGACTATATGTGCGAATTtgggtgggtgtgtgggtttggatgggtgggt--gTATATGTGTACATGTGC-ACACACACTTGTGTGTat--gttctaagtcattactgatcagaggaatgtaaatgaaaaccataatgtaacattcttttatcccactagacaggaaaatattaaaaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaact i macNem1.NW_012016688v1 C 0 I 3 s cerAty1.NW_012001075v1 13246851 418 + 18905526 -aaagctatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagcaagttaataaaaaat------aactgaatagaaaaa--ggggtaaaagaaatgacctcaatttcactccagagaagaaacacacatggTAAAAGTAAAGACTCTATGTGCGAATTTGGGTGGGTGTGTGGGTTTGGATGGGTGGGT--GTATATGTGTACATGTGC-ACACACACTTGTGTGTat--gttctaagtcattactaatcagaggaatgtaaatgaaaaccataatgtaacattcttttatcgcactagacaggaaaatattaaaaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaact i cerAty1.NW_012001075v1 C 0 I 3 s chlSab2.chr18 60075160 416 - 72318688 -aaagctatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----aatagtaaacttcagcaagttaataaaaaat------aactgaatagaaaaa--ggggtaaaagaaatgacctcaatttcactccagagaagaaacacacatggTAAAAGTAAAGACTATATGTGCGAATTtgggtgggtgtgtgggtttggatgggtgggt--gTATATGTGTACATGTGC-ACACACACCTGTGTGTat--gttctaagtcattactaatcagaggaatgtaaatgaaaaccataatgtaacattcttttatcccactagacaggaaaatattaaaaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaa-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 412221 418 - 1517660 -aaagctatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagcaagttaataaaaaat------aactgaatagaaaaa--ggggtaaaagaaatgacctcaatttcactccagagaagaaacacacatggTAAAAGTAAAGACTATATGTGCGAATTtgggtgggtgtgtgggtttggatgggtgggt--gTATATGTGTACATGTGC-ACACACACTTGTGTGTat--gttctaagtcattactaatcagaggaatgtaaatgaaaaccataatgtaacattcttttatcccactagacaggaaaatattaaaaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaact i manLeu1.NW_012106698v1 C 0 I 3 s colAng1.NW_012115433v1 3508340 418 + 6513552 -aaaactatcacaatggtcactatacaaaaatcaagaaaatataagccaaaaagttattgacaat-acatataaccaaaataggattagtattcataata-----tacagtcaacttcagcaagttaataaaaaat------aactaaatagaaaaa--ggggtaaaagaaatgacctcaatttcacaccagagaagaaacacacatggTAAAAGTAAAGACTATATGTGCGAATTTGGGTGGGTGTGTGGGTTTGGATGGGTGGGT--GTATATGTGTACATGTGC-ACACACATTTGTGTGTat--gttctaagtcattactaatcagaggaatgcaaaggaaaaccataatgtaacattcttttatcccaccagacaggaaaatattaagaattctgtaaatgtcaagtgc---agaagagaatctag---cacagaaact i colAng1.NW_012115433v1 C 0 I 3 s calJac3.chr13 105278133 416 + 117903854 -aaagctatcataaatgtcactctgcaaaaatcaagaaaacataagccaaaaagttagacacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagcgagtcaataaaaaaa------aactgaattaaaaaaagggggtaaaagaAATGACCCTAGTTTCACCCCAGAAAAGAAACACACAAGGCAAAAATAAAGACT----------ATTtgggtgggtgtgtgggtttggatgggtgggtgggtATATGTGtacatgtgcaacacacacttgtgtgtataagctctaagtcattactaatcagaggaatgtaaatgaaaaccataatttgacatccttttatcccaccagacaggaaaatattaaaaatcctgtaaatgtcaagtgc---agagtaaaatttagaacaacagaaa-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19465843 424 - 31320352 -aaagctatcataaaggtcactctgcaaaaatcaagaaaacataagccaaaaagttagtcacaat-acatataaccaaaataggattagtattcataata-----tatagtaaacttcagtgagtcaataaaaaaa------tcctgaatttaaaaa--ggggtaaaagaaatgaccccagtttcactccagaaaagaAACACACAAGGCAAAAATAAAGACTA--TGTGTGAATTtgggtgggtgtgtgggtttggatgggtgggtgggtATATGTGTACATGTGCAACACACAATTGTGTGTATatgctgtaagtcattactaatcagaggaatgtaaatgaaaaccataatttgacatccttttatcccaccagacaggaaattattaaaaatcctgtaaatgtcaagtac---agaagaaaatctagaacaacagaaact i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1661617 432 + 2203405 -aaaGCTATCATAAAGGTCACTCTGCAAAAATCAAGAAAATATAAGCCAAAAAGTTAGTCACAAT-ACGTATAACCAAAATAGGATTAGTATTCATAATATACGGTATAGTAAACTTCAGTGAGTCAATAAAAAAA-----TAACTGAATAAAAAAA--GGGGTAAAAGAAATGACCCCAGTTTCACTCCAGAAAAGAAACACACAAGGCAAAAATAAAGACTAtgtgtgtgaatttgggtgggtgtgtgggtttggatgggtgggtgggtatatgtgtacatgtgcaacacacacttgtgtgtataagttctaagtcattactaatcagaggaatgtaaatgaaaaccataatttgacatcattttatcccaccagacaggagaatattaaaaatcctgtaaatgtcaagtgc---agaagaaaatctagaacaacagaaact i cebCap1.NW_016107689v1 I 263 C 0 s aotNan1.NW_018502140v1 3613324 429 - 14941987 -aaagctatcataaaggtcactctacaaaaatcaagaaaacataagccaaaaagttagtcacaataaaatataaccaaaataggattagtattcataata-----tatagtaaacttcagtgagtcaataaaaaaaaaaaaaaactgaataaaaaaa--ggggtaaaagaaatgaccccagtttcactccagaaaagaAACACACAAGGCAAAAATAAAGACTATGTGTGTGAATTtgggtagatgtgtgggtttggatgggtgggtgggtATATGTGtacatgtgc-acacacacttgtgtgtataagctctaagtcattactaatcagagaaatgtaaatgaaaatcataatttgacatccttttatcccatcagacaggaacatattaaaaatcctgtaaatatcaagtgc---agaagaaaatctag---aacagaaact i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11240590 369 - 20685099 ataaataatcacaaaggtc--------------------ataaatgccaaaac-tcatccacaat-acatataaccaaaaaaggattagtattcataata-----tacaacgaacatgaatgaaccaacaaaacat-----ttaatgcaaagaaaaa--ggggtgaaaaatgtgacccaaacttcatttcacagaagaaacaca-atggcaaaGATGAAGACTAC-------------------TGTGTTGG--TGGGGGGATACGTGTGTATATGTATGCATGTGC-------ACTTGTGCTTATATGTTTTAAGTC---AGTTATCAGAGGGATATTCTTGaaaaccaaaatgtgacatctttttattcca---------aaaatattgaaaagtccaaaaatgtccagtccgggggaaaaaaatctagagcaacagagctt i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=11782.000000 s hg38.chr18_GL383571v1_alt 145714 11 + 198278 cttctatatt--g------ s panTro5.chr18 65055743 11 + 78221452 cttctatatt--g------ i panTro5.chr18 C 0 C 0 s panPan2.chr18 64174800 11 + 77229886 cttctatatt--g------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5394297 11 + 17472758 cttctatatt--g------ i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139434763 13 - 152096393 cttctatattaga------ i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63076248 3 - 75711847 -----aga----------- i macFas5.chr18 C 0 C 0 s chlSab2.chr18 60075576 5 - 72318688 ---ctaga----------- i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105278549 11 + 117903854 cttctatatt--a------ i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19466267 11 - 31320352 cttctatatt--a------ i saiBol1.JH378121 C 0 I 2 s cebCap1.NW_016107689v1 1662049 11 + 2203405 cttctatatt--a------ i cebCap1.NW_016107689v1 C 0 I 2 s aotNan1.NW_018502140v1 3613753 11 - 14941987 cttccatatt--a------ i aotNan1.NW_018502140v1 C 0 I 2 s otoGar3.GL873546 11240959 17 - 20685099 tttttgtatt--aactgaa i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e colAng1.NW_012115433v1 3508758 3 + 6513552 I e manLeu1.NW_012106698v1 412639 3 - 1517660 I e cerAty1.NW_012001075v1 13247269 3 + 18905526 I e macNem1.NW_012016688v1 13635439 3 - 18804593 I e rheMac8.chr18 57384842 3 + 70235451 I a score=4161375.000000 s hg38.chr18_GL383571v1_alt 145725 432 + 198278 gtgttaatttatacagacaatctgaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacagatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------taaaaaggaagattaagtgggt----gtgggagtgaaggttcttagtacaaacaaaccaac-aa--------aaaaactaaattcctgcacatgtattttatggaacatacttaagaattttaataaaaaattacttgaatttgcaaaaactagaaatatccctaaaatctatcaagcagctaaaagata----aggtatggcatgttcctacaacggcatattcatataatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcac----attagac----aaaattttgagc-aaaaaataaaagcaagttggatactaat-ggtacaatgtgttac s panTro5.chr18 65055754 432 + 78221452 gtgttaatttatacagacaatctgaaaaacaatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacagatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------taaaaaggaagattaagtgggt----gtgggagggaaggttcttagtacaaacaaatcaac-aa--------aaaaactaaattcct-cacatgtactttatggaacatacttaagaattttaactaaaaattacttgaatttgcaaaaactagaaatatccctaaaatctatcaagcagctaaaagata----aggtatggcatgttcctacaatggcatattcatataatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcac----attagac----aaaattttgagcaaaaaaataaaagcaagttggatactaat-ggtacaatgtgttac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64174811 432 + 77229886 gtgttaatttatacagacaatctgaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacagatcatattaatccagaacctttcagctcta---gatatatacgc----------------------------------taaaaaggaagattaagtgggt----gtgggagggaaggttcttagtacaaacaaaccaac-aa--------aaaaactaaattcct-cacatgtactttatggaacatacttaagaattttaactaaaaattacttgaatttgcaaaaactagaaatatccctaaaatctatcaagcagctaaaagata----aggtatggcatgttcctacaatggcatattcatataatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcac----attagac----aaaattttgagcaaaaaaataaaagcaagttggatactaat-ggtacaatgtgttac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5394308 432 + 17472758 gtgttaatttatacagacaatctgaaaaataatttggc-------------------------------------------------------------------attgtccataatagttgaggatgtacagatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------taaaaaggaagattaagtgggt----gtgggagtgaaggttcttagtacaaacaaaccaac-aa--------aaaaactaaattcctgcacatgtattttatggaacatacttaagaattttaataaaaaattacttgaatttgcaaaaactagaaatatccctaaaatctatcaagcagctaaaagata----aggtatggcatgttcctacaacggcatattcatataatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcac----attagac----aaaattttgagc-aaaaaataaaaggaagttggatactaat-ggtacaatgtgttac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139434776 433 - 152096393 gtgataatttatacagacaatctgaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacatatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------taaaaaGGAAGATTGA----------GTGGGAGGGAAGGTTCTTAGTACAAACAAACCAAC--A--------AAAAACTaaattcctgcacatgtacattatggaacatacttaggaattttaacaaaaaattacttgaatttgcaaaaattagaaatatccctaaaatctaccaagcagataaaatataaattaggtatggcatgttcctacaatagcatattcatataatgaatcactaccatggtgaaagtaagtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaat-ggtacaatgtgttac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57384845 433 + 70235451 gtgttaatttatacagacaatctaaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacatatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------tgaaaaggaacatt----gggt----gtgggagggaaggttcttagtacaaaca----aac-aa--------aaatactaaattcctgtgcatgtacattatggaacatacttaagaattttaacaaaaaattacttgaatttgcaaaaattagaaatatacctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcccacaatggcatattcatgtaatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaaaaggtacaatgtgttac i rheMac8.chr18 I 3 C 0 s macFas5.chr18 63076251 433 - 75711847 gtgttaatttatacagacaatctaaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacatatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------tgaaaaggaacATT----GGGT----GTGGGAGGGAAGGTTCTTAGTACAAACA----AAC-AA--------AAATACTaaattcctgtgcatgtacattatggaacatacttaagaattttaacaaaaaattacttgaatttgcaaaaattagaaatatacctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcccacaatggcatattcatgtaatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaaaaggtacaatgtgttac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13635442 433 - 18804593 gtgttaatttatacagacaatctaaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacatatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------tgaaaaggaacatt----gggt----gtgggagggaaggttcttagtacaaaca----aac-aa--------aaatactaaattcctgtgcatgtacattatggaacatacttaagaattttaacaaaaaattacttgaatttgcaaaaattagaaatatacctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcccacaacggcatattcatgtaatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaaaaggtacaatgtgttac i macNem1.NW_012016688v1 I 3 C 0 s cerAty1.NW_012001075v1 13247272 433 + 18905526 gtgttaatttatacagacaatctaaaaaataatttggc-------------------------------------------------------------------attgtctataatagttgaggatgtacatatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------tgaaaaggaacatc----aggt----gtgggagggaaggttcttagtacaaaca----aac-aa--------aaatactaaattcctgcgcatgtacattatggaacatacttaagaattttaacaaaaaattacgtgaatttgcaaaaattagaaatatacctaaaatctatcaagcggctaaaagataaataaggtatggcatgttcccacaatggcatattcatgtaatgaatcactaccatggtgaaaatatgtcatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaaaaggtacaatgtgctac i cerAty1.NW_012001075v1 I 3 C 0 s chlSab2.chr18 60075581 433 - 72318688 gtgttaatttatacagacaatctaaaaactaatttggc-------------------------------------------------------------------attgtctataatagttgaagatgtacatatcatactaatccagaacctttcagctcta---gatatatatgc----------------------------------tgaaaaggaacATT----GGGT----GTGGGAGGGAAGGTTCGTAGTACAAACA----AAC-AA--------AAATACCaaattcctgcgcatgtacattatggaacatacttaagaattttaacaaaaaattacttgaatttgcaaaaattagaaatatacctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcccacaatggcatattcatgtaatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagctagttggatactaaaaggtacaatgtgttac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 412642 433 - 1517660 gtgttaatttatacagacaatctaaaaaataatttggc-------------------------------------------------------------------attgtctataacagttgaggatgtacatatcatattaatccagaacctttcagctcta---gatatatatgc----------------------------------tgaaaaggaacatc----gggt----gtgggagggaaggttcttagtacaaaca----aac-aa--------aaatactaaattcctgcgcatgtacattatggaacatacttaagaatttgaacaaaaaattacgtgaatttgcaaaaattagaaatatacctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcccacaatggcatattcatgtaatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaaaaggtacaatgtgttac i manLeu1.NW_012106698v1 I 3 C 0 s colAng1.NW_012115433v1 3508761 429 + 6513552 gtgttaatttatacagacaatctaaaaaataatttggt-------------------------------------------------------------------attgtctataatagttgaggatgtacatatcatattaatccagaacctttctgctcta---gatatatatgt----------------------------------tgaaaaggaagatt----gggt----gtgggagggaagtttcttagt----aca----aac-aa--------aaatactaaattcctgcacatgtacattatggaacatatttaagaattttaacaaaaaattacttgaatttgcaaaaattagaaatatacctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcctacaatggcatattcatgtaatgaatcactaccatggtgaaaatatgtgatctccacctacaaacatcacatgtattagac----aaaattttgagc-aaaaaataaaagcaagttggatactaacaggtacaatgtgttac i colAng1.NW_012115433v1 I 3 C 0 s calJac3.chr13 105278562 455 + 117903854 gtgttaacttac----ataatttggaaaataatttggc-------------------------------------------------------------------attgtctagaatagttgaggatgtacatatcatatgaatccagaacctttcagctcta---gatacacacacacacacacacacac------acacacacacaca-ctaaaaagaagactgaGTAGCT----GTGAGAGGGAAGGCTCTTAGTACAAACAAAGTAACAAA--------AAAAACTaaattattgcaca------gtacgaaacatacttaagaattttaacagaaaa----ttgaatttgcaaaaattagaaatatccctaaaatctatcaagcagctaaaagataaataaggtatggcatgttcctacaatggcatattcatataatgaatcactaccttggtgaaaatatgtgatctccacctacaaatataacatacattagat----aatattttgagc-aaaaaataaaagcaagatagatactaatatatacaatatgttaa i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19466280 431 - 31320352 gtgttaacttat----ataatttggaaaataatttggc-------------------------------------------------------------------attgtctagaatagttgaggatgtacatatcatatgaatccagaacctttcagctata---tatatatatgc----------------------------------taaaaaagaagactgggtagct----gtgagagggaaggctcttagtataaacaaagtaac-aa--------aaaaactaaattcttgcata------gtatgaaacatacttaagaattttaacagaaagttgcttgaatttgcaaaaattagaaatatccataaaatctatcaagcagctaaaatataaataaggtatggcatgttcctacaatggcatattcatataatgaatcactaccttggtgaaaatatgtgatctccacctacaaatatcagatacattaaat----aatattttgagc-aaaaaataaaagcaagatagatactaatatatacaatatgttaa i saiBol1.JH378121 I 2 C 0 s cebCap1.NW_016107689v1 1662062 463 + 2203405 gtgttaacttat----ataatttggaaaataatttggc-------------------------------------------------------------------attgtctagaatagttgaggatgtacatatcatatgaatccagAACCTTTCAGCTACa---tatatatatatatacatatatatatattttaatatctatatatatTAAAAAAGAAGACTGAGTAGCT----GTGAGA--GAAGGTTCTTAGCACAAACAAAGTAAC-AA--------AAAAACTACattcttgcaca------gtatggaacatacttaagaattttaacagaaagttgtttgaatttgcaaaaattagaaatatccctaaaatctatcaagcagctaaaaggtaaataaggtatggcatgttcctacaatggcatattcatataatgaatcactaccttggtgaaaatatgtgatctccacctacaaatatcagatacattagat----aatattttgagc-aaaaaataaaagcaagatagatactaatatatacaatatgTTAA i cebCap1.NW_016107689v1 I 2 C 0 s aotNan1.NW_018502140v1 3613766 453 - 14941987 gtgttaacttac----ataatttggaaaataatttggc-------------------------------------------------------------------attgtctagaatagttgaggatgtacatatcatatgaatccagaacctttcagctctagattatataTATATATATATATGTGTGTGTGTT---------------AAAAAAAGAAGACTGGGTAGCT----GTGAGAGGGAAGGCTCTTAGTACAAACAAAGTAAC-AA--------AAAAACCaaattcttgcaca------gtatggaacatacttaataattttaacagaaaattgcttgaatttgcaaaaattagaaatatccctaaaacctatcaagcagctaaaagataaataaggtatggcatgttcctacaatggtatattcatataatgaatcactaccttggtgaaaatatgtgatctccacctacaaacatcacatacattagat----aatattttgagc-aaaaaataaaagcaagagagatactaatatatacaatatgTTAA i aotNan1.NW_018502140v1 I 2 C 0 s otoGar3.GL873546 11240976 504 - 20685099 gtgtcaattaaaacaaacaatgtggaagataatttggcataatctagaatagctaatgatgtttatatcatattaacccTGATATGCTTATGTCATATAACCCATATTATCTAGAATAGTTGACAGTGCTTATATCATATTAACCCTGAACATTTCAGCCCCA---GACATATATTC----------------------------------TAGAAAGAAAAATGGAGTGGGTTATGGTGGGTGGGAAGATTCTGGGCACAAGCC----AAA-AAATTTTTGCACACATATaattcttatacatgtacattatagaaaatatttaagaattttaatagaaca-tgcacgagtgaacaaaagttagaactatcccccaaatccatcaacaagccaaaagatcaataatgtatgatacgttcacacaatggcatactt------tgaaaca------tggtggaactatgtgacctccacctacaaacatcacatgcattagataaagaaaattgtgaac-aaag---aaaaacaagttgtaaaggaatatatgcagcatgttac i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=3612544.000000 s hg38.chr18_GL383571v1_alt 146157 363 + 198278 tgtgacagttagtattaggtgtcaacctgactagactgagggattcctagatggctgatgaagcgttgttcctgggtgtgtctgtgagggtgttggcagaggagactggcatttgaggcagtggactgggagaggaaaacccaccttcaatgtgggggtggacaccatctaataggctgccagcaaggctagaagaaagcaggcagcagaactgggatagacaggttgcttgctgagttggcttgctctctttcttttcctgctgtgccacatacttggcttcctctcctcctgacctcggacatcagactccaggttctttagcatttggacttgaaccagcagcatgtcaggggttctcgg s panTro5.chr18 65056186 363 + 78221452 tgtgacagttagtattaggtgtcaacctgactagactgagggattcctagatggctgatgaagcattgttcctgggtgtgtctgtgagggtattggcagaggagactggcatttgaggcagtggactgggagaggaaaacccaccttcaatgtgggggtgaacaccatctaataggctgccagcaaggctagaacaaagcaggcagcagaactgggatagacaggttgctggctgagttggcttgctctctttcttttcctgctgtgccacatacttggcttcctctcctcctgacctcagacatcagactccaggttctttagcatttggacttgaaccagcagcatgtcagggggtctcgg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64175243 363 + 77229886 tgtgacagttagtattaggtgtcaacctgactagactgagggattcctagatggctgatgaagcattgttcctgggtgtgtctgtgagggtattggcagaggagactggcatttgaggcagtggactgggagaggaaaacccaccttcaatgtgggggtgaacaccatctaataggctgccagcaaggctagaacaaagcaggcagcagaactgggatagacaggttgctggctgagttggcttgctctctttcttttcctgctgtgccacatacttggcttcctctcctcctgacctcagacatcagactccaggttctttagcatttggacttgaaccagcagcatgtcagggggtctcgg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5394740 360 + 17472758 tgtgacggttagtattaggtgtcaatctgactagactgagggattcctagatggctgatgaagcgttgttcctgggtgtgtctgtgagggtgttggcagaagagactggcatttga-gccgtggactgggagaggaaaacccaccttcaatgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagcagaagtgggatagacaggttgcttgctgagttggcttgctctctttcttttcctg-tgtgccacatacttggcttcctctcctcctgacct-ggacaccagactccaggttctttaccatttgggcttgaaccagcagcatgtcaggggttctcgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139435209 360 - 152096393 tgtgatggttagtattaggtgtcaacctgactagactgagggattcctagatggctgatgaagcattgttcctgggtgtgtctgtgggggtgctggca---gagattggcatttgaggcagtgggctgggagaggaaaacccaccttcaatgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgcttgctgagttggcttgctctctttctttccctgctgtgccacatacttggcttcctctcctcctgaccttggacatcagactccaggttctttagcatttggacttgaaccagcagcatgtcaggggttctcgg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57385278 363 + 70235451 tgtgatggttagtattaggtgtcaacttgactagactgagggattcctagacggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagattggcatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgctagctgagttggcttgctctctttctttccctgccatgtcacatactcagcttcctctcctcctggccttggatatcagactccaggttcttcagcatttggacttgaaccagcagcatgtcaagggttctcag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63076684 363 - 75711847 tgtgatggttagtattaggtgtcaacttgactagactgagggattcctagacggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagattggcatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgctagctgagttggcttgctctctttctttccctgccatgtcacatactcagcttcctctcctcctggccttggatatcagactccaggttcttcagcatttggacttgaaccagcagcatgtcaagggttctcag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13635875 363 - 18804593 tgtgatggttagtattaggtgtcaacttgactagactgagggattcctagacggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagattggcatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgctagctgagttggcttgctctctttctttccctgccatgtcacatactcagcttcctctcctcctggccttggatatcagactccaggttcttcagcatttggacttgaaccagcagcatgtcaagggttctcag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13247705 363 + 18905526 tgtgatagttagtattaggtgtcaacttgactagactgagggattcctagatggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagactggcatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgcttgctgagttggcttgctctctttctttccctgtcatgtcacatactcagcttcctctcctcctggccttggatatcagactccaggttcttcagcatttggacttgaaccagcagcatgtcaagcgttctcag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076014 363 - 72318688 tgtgatggttagtattaggtgtcaacttgactagactgagggattcctagatggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagattgacatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgcttgctgagttggcttgctctctttctttccctgccatgtcacatactcagcttcctctcctcctggccttggatatcagactccaggttcttcagcatttggacttgaagcagcagcatatcaagggttctcag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413075 363 - 1517660 tgtgatggttagtattaggtgtcaacttgactagactgagggattcctagatggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagattggcatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacaccatctaataggctgccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgcttgctgagttggcttgctctctttctttccctgccatgtcacatactcagcttcctctcctcctgcccttggatatcagactccaggttcttcagcatttggacttgaaccagcagcatgtcaagggttctcag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3509190 363 + 6513552 tgtgatggttagtattaggtgtcaacctgactagactgagggattcctacatggctgatgaagcatttttcctgggtgtgtctgtgaaggtgctgctagaggagattggcatttgaggcagtggactgggagaggaaaacccaccttcagtgtgggggtggacatcatctaataggctcccagcaaggctagaacaaagcaggcagaagaactgggatagacaggttgcttgctgagttggcttgctctctttctttccctgccatgccacatactcagcttcctctcctcctggccttggatatcagactccaggttcttcagcatttggacttgaaccagcagcatgtcaagggttctcag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279017 363 + 117903854 tgtgacagttaacattagatgttaacctgactagattgaagaattcctagatggctgatgaagcattgttcctgggtgtgtctgtgagggtgctgccagaggagattggtatttgaggcagtggactgggaggggaaaacccaccttcaatgcgggggtggacaccatctattagggtgccagcaaggatagaacaaagcaggcagaagaactgggatagacaaactgcttgctgagttgacttgttctctttctctccctgccatgccacatacttggcttcctctcctcttgaccatggacattagactccaggttcttcagcctttggacttgaaccagcagcccgtcaggggttctcca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19466711 363 - 31320352 tgtgagagttaatattagatgtcaatctgactagattgaaggattcctagatggctgatgaagcattgttcctgggtgcatctgtgagggtgctgccagaggagattggcatttgaggcagtggactaggaggagaaaacccaccttcaatgaggggttggataccatctaatacagtgccagcaaggatagaacaaagcaggcagaagaagtgggatagacaaactgcttgctgagttggcttgttctctttctctccctgccatgccacatacttggcttcctcttcttttgaccttggacattagactccaggtccttcagcctttggacttgaaccagcagcctgtcaggggttctcca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1662525 363 + 2203405 tgtgacagttaatattagatgtcaacctgactagattgaaggattcctagatggctgatgaagcattgttcttgcgtgtgtctgtgagggtgctgttagaggagattggcgtttgaggcagtggactaggaggggaaaacccaccttcaatgcgggggtggacaccatctaacatggtgccagcaatgatagaacaaagcaggcagaagaactgggatagacaaactgcttgctgagttggcttgttctctttctctccctgccatgccacatacttggcttcctcttcttttgaccttggacattagactccaggttcttcagcctttggacttgaaccagcagcctgtcaggggttctcca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3614219 349 - 14941987 tgtgacagttaatattagatgtcaacctgactagattgaaggattcctagatggctgatgaagcattgttcctgggtgtgtctgtgagggtgctgccagaggagattggcatttgaggcagtggactgggaggggaaatcccaccttcaatgcaggggtggacaccatctaatagggtgccagcaaggatagaacaaagcaggcagaag--------------aactgcttgctgagttggctttttctctttctctccctgccatgccacatacttggcttcctctcctcttgaccttggacattagactccaggttcttcagcctttggacttgaaccagcagcctatcaggggttctccg i aotNan1.NW_018502140v1 C 0 I 877 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e otoGar3.GL873546 11241480 0 - 20685099 C a score=2028939.000000 s hg38.chr18_GL383571v1_alt 146520 210 + 198278 gccttcagtctc-agactgaatgctgcactgttggcttccctggtttcgaggcttttggaattggactgag-cagtgctaccagcttctctttccccagctggcagatgacctactctggaacttccccttgtaatcctataaaccaattctccctaacaaccttatcttattggttttgtccctttgg----agaaccctgactaatacagttag s panTro5.chr18 65056549 210 + 78221452 gccttcagtctc-agactgaatgctgcactgttggcttccctggttttgaggcttttggaattggactgag-cagtgctaccagcttctctttccccagctggcagacgacctactctggaacttccccttgtaatcctataaaccaattctccctaacaaccttatcttattggttttgtgcctctgg----agaaccctgactaatacagttag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64175606 210 + 77229886 gccttcagtctc-agactgaatgctgcactgttggcttccctggttttgaggcttttggaattggactgag-cagtgctaccagcttctctttccccagctggcagacgacctactctggaacttccccttgtaatcctataaaccaattctccctaacaaccttatcttattggttttgtgcctctgg----agaaccctgactaatacagttag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395100 210 + 17472758 gccttcagtctc-agactgaatgctgcactgttggcttccctggtttcgaggcttttggaattggactgaa-cagtgctaccagcttctctttgcccagctggcagacgacctactctggaacttccccttgtaatcctataaaccaattctctctaacaaccttatcttattggctttgtccctctgg----agaaccctgactaatacagttag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139435569 214 - 152096393 gccttcagtctc-agactgagtgcttcactgttggcttccctggtttcgaggcttttggaattggactgag-caatgctaccagcttctctttacccagctggcagatgacctactctggaacttccccttgtaatcctataaaacaattctccctaacaaccttatcttattggttctgtccctctggagacagaaccaatactaatacagttag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57385641 210 + 70235451 gccttcagtctc-agactgagtgctgcactgttgacttccgtggtttcgaggcttttggaattggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaacttccccttgtaatcctataagccaattctccctaacaaacttgtcttattggttttgtccctctgg----agaaccctgacgaatagagttag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077047 210 - 75711847 gccttcagtctc-agactgagtgctgcactgttgacttccgtggtttcgaggcttttggaattggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaacttccccttgtaatcctataagccaattctccctaacaaacttgtcttattggttttgtccctctgg----agaaccctgacgaatagagttag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636238 210 - 18804593 gccttcagtctc-agactgagtgctgcactgttgacttccgtggtttcgaggcttttggaatcggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaacttccccttgtaatcctataagccaattctccctaacaaacttgtcttattggttttgtccctctgg----agaaccctgatgaatagagttag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248068 210 + 18905526 gccttcagtctc-agactgagtgctgcactgttgacttccgtggtttcgaggcttttggaattggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaacttccccttgtaatcctataagccaattctccctaacaaacttatcttattggttttgtccctctgg----agaaccctgacgaatagagttag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076377 210 - 72318688 gccttcagtctc-agactgaatgctgcactgttgacttccgtggtttcgaggcttttggaattggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaatttccccttgtaatcctataagccaattctccctaacaaacttatcttattggttttgtccctctgg----agaaccctgacgaatagagttag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413438 210 - 1517660 gccttcagtctc-agactgagtgctgcactgttgacttccgtggtttcgaggcttttggaattggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaacttccccttgtaatcctataagccaattctccctaacaaacttatcttattggttttgtccctctgg----agaaccctgacgaatagagttag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3509553 209 + 6513552 gccttcagtctc-agactgagtgctgcactgttgactttcctggtttcgaggcttttgaaattggactgag-caatgctaccagcttctctttccccagctggcagatgacctactgtggaactt-cccttgtaatcctataagccaattccccctaacaaccttatcttattggttttgtccctctgg----agaaccctgacgaatatagttag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279380 206 + 117903854 gccttcagtctt-agactgaaagctgcactgttggcttccctggttttcagggttttaaatttggactgag-caaggctaccagcttctctttccacagctggcagatggcctactgtggaatgtccccttgtaatcctgtaagccaattctccctaagaaccttatcttattgtttctgtccttctgg----agaaccct----aatacagtcag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467074 207 - 31320352 gttgtcagtctcaagactgagagctgcactgttggcttccctggttttgagggttttagatttagactgag-caagtctaccaacttctctttccccagctggcagacggcctactgtggaatgttcccttgtaatcctgtaagccagttctccctaacaaccttatcttattggttctgtccttctgg----agaaccct----aatacagtcag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1662888 206 + 2203405 gccttcagtctc-agattgagagctgcactgttggcttccctggttttgagggttttagatttggactgag-caaggctaccagcttctccttccccagctggcacatggcctactgtggaatgtccccttgtaatcctgtaagccaattctccctaacaactttgtcttattggttctgtccttctgg----agaaccct----aaTAGAGACAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3615445 207 - 14941987 gccttcagtctc-agactgagagctgcactgttggcttccctggttttgagggttttaaatttggactgagccaaggctaccagcttctctttccccagctggcagatggcctactgtggaatgtccccttgtaatcctgtaagccaattctccctaacaaccttatcttattggttctgtccttctgg----agaaccct----aatacagtcag i aotNan1.NW_018502140v1 I 877 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I e otoGar3.GL873546 11241480 0 - 20685099 C a score=69888.000000 s hg38.chr18_GL383571v1_alt 146730 7 + 198278 tattaaa s panTro5.chr18 65056759 7 + 78221452 tattaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64175816 7 + 77229886 tattaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395310 7 + 17472758 tattaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139435783 7 - 152096393 tattaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57385851 7 + 70235451 tattaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077257 7 - 75711847 tattaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636448 7 - 18804593 tattaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248278 7 + 18905526 tattaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076587 7 - 72318688 tattaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413648 7 - 1517660 tattaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3509762 7 + 6513552 tgttaaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279586 7 + 117903854 tatttaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467281 7 - 31320352 tatttaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663094 7 + 2203405 Tatttaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3615652 7 - 14941987 tatttaa i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11241480 7 - 20685099 tatttag i otoGar3.GL873546 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112313954 6635 - 122678785 I a score=10438.000000 s hg38.chr18_GL383571v1_alt 146737 1 + 198278 a s panTro5.chr18 65056766 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64175823 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395317 1 + 17472758 a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139435790 1 - 152096393 a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57385858 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077264 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636455 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248285 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076594 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413655 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3509769 1 + 6513552 a i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279593 1 + 117903854 a i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467288 1 - 31320352 a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663101 1 + 2203405 a i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3615659 1 - 14941987 a i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11241487 1 - 20685099 c i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112320589 1 - 122678785 a i canFam3.chr1 I 6635 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=589063.000000 s hg38.chr18_GL383571v1_alt 146738 50 + 198278 taaaatttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc s panTro5.chr18 65056767 50 + 78221452 tacaatttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64175824 50 + 77229886 tacaatttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395318 50 + 17472758 taaaatttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139435791 50 - 152096393 taaaatttacaaacatgcaaaatcatacagtatg----ttgatgaagatagtgc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57385859 50 + 70235451 taaagtttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077265 50 - 75711847 taaagtttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636456 50 - 18804593 taaagtttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248286 50 + 18905526 taaagtttacaaacatgcaaaatcatacagtatg----ttgatgaagatacagc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076595 50 - 72318688 taaagtttacaaacatgcaaaatcatacagtatg----ttgatgaagatagagc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413656 50 - 1517660 taaagtttacaaacatgcaaaatcatacagtatg----ttgatgaagatacagc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3509770 50 + 6513552 tgaagtgtacaaacatgaaaaatcatacagtatg----ttgatgaagatagagc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279594 50 + 117903854 tacagttcacaaacatgcaaaatcatactgtatg----ttgataataatagact i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467289 54 - 31320352 taaagttcacaatcatgcaaaatcataccgtatgttgattgataataatagact i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663102 50 + 2203405 taaagttcacaaacatgcaaaatcatactgtatg----ttgataataatagact i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3615660 50 - 14941987 taaagttcacaaacaagcaaaatcatactgtatg----ttgataataatagact i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41532473 50 + 83067054 taaactttaaaaacatgaaaaattatacaatatg----ttgattaagacagaga i micMur3.chr19 N 0 C 0 s otoGar3.GL873546 11241488 48 - 20685099 taaagtttaaaaacatgcaaaattatacaatatg----ttgattaaggcaga-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112320590 50 - 122678785 tagtgtttgaaaccatgcaaaagtatacactatg----ttgacaaggacagaca i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1268844 3744 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=2747386.000000 s hg38.chr18_GL383571v1_alt 146788 206 + 198278 tatatatagtggagctataaagaagaacaaggaaatgataaacacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acaatgtgaaaatggaaggtcagatggagggcttaactactaatattaactgcatatttcttacagtggtt-ggtgt-gtacactcatgtcca-ttttattactatctttcatattaca s panTro5.chr18 65056817 206 + 78221452 tatatatggtggagctataaagaagaacaaggaaatgataaacacaaaatccaggacagaagttacctctgggatg--------gttgatgggagcag-acaatgtgaaaatggaaggtcagatggagggcttaactactaatattaactgcatatttcttacagtggtt-ggtgt-gtacactcatgtcca-ttttattactatctttcatattaca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64175874 207 + 77229886 tatatatggtggagctataaagaagaacaaggaaatgataaacacaaaatccaggacggaagttacctctgggatg--------gttgatgggagcag-acaatgtgaaaatggaaggtcagatggagggcttaactactaatattaactgcatatttcttacagtggtt-ggtgtggtacactcatgtcca-ttttattactatctttcatattaca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395368 206 + 17472758 tatatatggtggagctataaagaagaacaaggaaatgataaacacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acaatgtgaaaatggaaggtcagatggagggcttaactactaatattaactgcatatttcttacagtggtt-ggtgt-gtacactcatgtcca-ttttattactatctttcatattaca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139435841 199 - 152096393 catatatggtggagctata---aagaacaaggaaatgataaacacaaaatccaggacagaagttacctctgagatg--------gttggtgggagcag-acaatgtgaaaatgggaggtcagatggagggcttaactactaatattaactgcgtatttcttacagtggtt-ggtgt-gtacactcatgtcca-ctttatta----ctttcatattaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57385909 206 + 70235451 tacatatggtggagctataaagaacaagaaggaaatgataaatacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acgatgtgaaaatggcaagtcagatggagggcttaactactaatattaactatgtatttcttagagtggtt-ggtgt-gtatactcatgttca-ttttactactatctttcatattaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077315 206 - 75711847 tacatatggtggagctataaagaacaagaaggaaatgataaatacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acgatgtgaaaatggcaagtcagatggagggcttaactactaatattaactatgtatttcttagagtggtt-ggtgt-gtatactcatgttca-ttttactactatctttcatattaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636506 206 - 18804593 tacatatggtggagctataaagaagaacaaggaaatgataaatacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcgg-acgatgtgaaaatggcaagtcagatggagggcttaactactaatattaactatgtatttcttagagtggtt-ggtgt-gtatactcatgttca-ttttactactatctttcatattaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248336 206 + 18905526 tacatatggtggagctataaagaagaacaaggaaatgataaacacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acgatgtgaaaatggcaagtcagatggagggcttaactactaatattaactatgtatttcttagagtggtt-ggtgc-gtatactcatgttcg-ttttactactatctttcatattaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076645 206 - 72318688 tacatatggtggagctataaagaagaacaaggaaatgatacatacaaaatccaggacagaagttacctccgggatg--------gttggtgggagcag-acgatgtgaaaatggcaagtcagatggagggcttgactactaatatttactatgtatttcttagagtggtt-ggtgt-gtatactcatgttcg-ttttactactatctttcatattata i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413706 206 - 1517660 tacatatggtggagctataaagaagaacaaggaaatgataaacacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acgatgtgaaaatggcaagtcagatggagggcttaactactaatattaactatgtatttcttagagtggtt-ggtgt-gtatactcatgttcg-ttttactactatctttcatattaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3509820 206 + 6513552 tacatatggtggagctataaagaaaaacaaggaaatgataaatacaaaatccaggacagaagttacctctgggatg--------gttggtgggagcag-acgatgtgaaaatggaaagtcagatggagggcttaactactaatattaactgagtatttcttagagtgctt-ggtgt-gtatactcatgttcg-ttttactactatctttcatattaca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279644 202 + 117903854 tatatacagtggagctataaagaacaa----aaaatgataaacacaaaatccaggacagaagtaacctctgggatg--------gttcatgggagcag-aggatgtgaaaatggaaggtcagatggagggcttagctactaatattaactgcgtatttcttagcgaggtt-agtgt-gtacactcatgctca-ttttattactatctttcatattaaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467343 214 - 31320352 tatatatggtggagctataaagaagaacaaggaaattataaacacaaaatccaggacagaactaacctctgggggggggggggagtttatgggagcag-aggttgtgaaaatggaaggtcagatggagggcttaactactaacattaactgcatgtttcttagcgaggtt-aatgt-gtacactcatgctca-ttttattactatctttcatattaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663152 203 + 2203405 tatatatggtggagctataaagaagaa---ggaaatgagaaacacaaaatccaggacagaagtaacctctgggagg--------gttcatcggagcag-aggatgtgaaaatggaaggtcagatggagggcttaactactcatattaactgcatatttcttagtgaggtt-agtgt-gtacactcatgctca-ttttattactatctttcatattaaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3615710 206 - 14941987 tacatatggtggagctataaagaggaacaaggaaatgataaacacaaaatccaggacagaagtaacctctgggatg--------gttcatgggagaag-aggatgtgaaaatggaaggtcagatggagggctgaactactaatattaactgaatatttcttagcaaggtt-agtgt-gtacactcatgctca-ttttattactatctttcatattaaa i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41532523 207 + 83067054 tatatatgttggagctataaagaaaatcaaggaaatggaaaacacaaaacccaggacagaagttatctctgggatg--------gttggtggaagcag-aggatgtgaaaatgaaaagtcagatggagggcttaactactaacattaattgtacacttctttgggttgtt-ggtgg-gtacactcatgtttattttttttactatcttttatattata i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1272588 206 - 1406956 tatatatattggagctataaaggaaatcaaggaaatggtaaacacaaaatctaggacagaagttatctctgggaag--------gttggtggaagcag-aggatgtgaaaatgaaaggtcagatggggggcttaactactaatattaattgtgcatttcttagggttgtt-ggtgg-gtaccctcatgttta-tttttttactatcttttatattata i proCoq1.NW_012148742v1 I 3744 C 0 s otoGar3.GL873546 11241536 200 - 20685099 ----catggtagagctgtaaagaaaattgaggaaatggtgaacacaacgcccaggac--aaggtatctctgggaa---------gttgggagaagcag-agtatgtgagcatggtaggtctggtggatggattaactactagtattaattgagcacttcttagggttgttgggtgc-gtaccttcatgtttc-tttttttaccatcttttatattaca i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112320640 188 - 122678785 --catatg-tggagctataaagaa-agcaaggaaatagtaaaca-gaaactcaggatagatgtcccctctgggatc--------actgtccggagcagcaggatgtgataatggaagatcagatggaaggcttAGCCTCTAGCATAAATT--------------GTGGGT-GACAG-TCATACTTTTATTCA-TTCTATTAATTTCTTTTGTATCAAA i canFam3.chr1 C 0 I 195 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=2517351.000000 s hg38.chr18_GL383571v1_alt 146994 187 + 198278 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTGTGGCCACAACAACGTATCAATACCATAGGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATACCTACAGTTCA s panTro5.chr18 65057023 186 + 78221452 tatgtttcataacattttgtaGAATGTGTCAGTATATGAATTCTAAACC-TAAATCCCA---GTTGTGGCCACAACAACGTATCAATACCATAGGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCA-TTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATACCTACAGTTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176081 186 + 77229886 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTGTGGCCACAACAACGTATCAATACCATAGGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCA-TTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATACCTACAGTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395574 185 + 17472758 tgtgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTGTGGCCACAACAACGTATCAATACCATAGGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCA-TTTTTTCA-TGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATACCTACAGTTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436040 186 - 152096393 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TGAATCCCA---GTTCTGGCCACAACAACATATCAATATCATAGGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCA-TTTTTTCATTGTCAACATATTAGTGCAATATATTTTGCATATCCA-AATACCTACAGTTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386115 187 + 70235451 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-CAAATCCCA---GTTCTGGCCACAACAACGTATCAATATCATAAGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATGCCTACAGTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077521 187 - 75711847 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-CAAATCCCA---GTTCTGGCCACAACAACGTATCAATATCATAAGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATGCCTACAGTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636712 187 - 18804593 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTCTGGCCACAACAACGTATCAATATCATAAGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATGCCTACAGTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248542 187 + 18905526 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTCTGGCCACAACAACGTATCAATATCATAAGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATGCCTACAGTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60076851 187 - 72318688 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTCTGGCCACAACAACGTATCAATATCACAAGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATGCCTACAGTTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 413912 187 - 1517660 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTCTGGCCACAACAACGTATCGATATCATAAGGGAGGGCTTCCAAATTCCCAGCTAGGGTCAATGCATTTTTTTCATTGTCAACATATTAGTGCAATCTATTTTGCATATCCA-AATGCCTACAGTTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510026 187 + 6513552 tatgtttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCA---GTTCTGGCCACAACAACGTATCAATATCATAAGGGAGGGCTTCCAAATTCCCAGCTAAGGTCAATGCATTTTTTTCATTGTCAACGTATTAGTGCAATCTATTTTGTGTATCCA-AATGCCTACAGTTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105279846 184 + 117903854 tatgcttcataacatttcgtagaatgtgtgactatatGAATTCTAAATC-TAAATCCCAGCAGCTTCGGCCAAAAGAACTTATGGATATCACGGGGGAGGGCTTCCAACTTCCCAACCAGGGTAAATGCA-TCTTTTCATTGTCAACATATG-----AATCTGTTTTGCATATTCA-AATACCTAAAATTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467557 184 - 31320352 catgcttcataacattttgtaGAATGTGTGAGTATATGAATTCTAAATC-TAAATCCCAGGTGCTCTGGCCAAAACAACTTATGGATATCATAGGGGAGGGCTTCCAACTTCCCAACCAGGGTAAATGCA-TCTTTTCATTGTCAACATATG-----AAACTATTTTGCATATCCA-AATACATAAAATTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663355 184 + 2203405 tatgcttcataacattttgtagaatgtgtgagtatatGAATTCTAAATC-TAAATCCCAGCTGCTCCGGCCAAAACAACTTATGGATATCACAGGGGAGGGCTTCCAACTTCCCAACCAGGGTAAATGCA-TCTTTTCATTGACAACATATG-----AAACTATTTTGCACATCCA-AATACCAAAAATTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3615916 184 - 14941987 tatgcttcataacattttgtagaatgtgtaagtatatGAATTCTAAATC-TAAATCCCAGGTGCTCCAGCCAAAACAACTTAGGGATATCATAGGGGAGGGCTTCCAACTTCTCAACCAGGGTAAATGCA-TCTTTTCATTGTCAACATATT-----AATCTATTTTGCATATCCA-AATACCTAAAATTCA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41532730 185 + 83067054 tatgttttataCCATATTTCAGAATGTGCGAGTGTATGAATTCTAAATC-TAAAACCCA---GCTCTGGCCACAGCAAATTAACAATAGCAT-GGGGAGGGGTTCCAATCTACCTGCCAGGGTCAGTGCA-TCTTTTCATTGTCAACATATTAGTGCAACCTATTTTGCATATCCA-AATACCTACAGTTCA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1272794 186 - 1406956 tatgttttatacCATATTGCAGAATGTGTGAGTGTATGAATTCTAAATC-TAAATACCA---ACTCTGGCTACAGCAAATTATCAATACCATAGGGGTGAGCTTCCAACCTCCCTGCTAGGGTCAGTGCA-TCTTTTCATTGTCAACATATTAGTGCAACCTATTCTGCATATCCA-AATACCTACAGTTCA i proCoq1.NW_012148742v1 C 0 I 198 s otoGar3.GL873546 11241736 185 - 20685099 tatattttgtaGCATATGGCATAATACGTGAGTGTATGAATTCTAAATC-TGAATCCAG---GATCTGACCACAGTAAATTATCCATAATATAGGGATAAGGATCCAACTTCCCTGCCAGGCTCAGTGAA--CCTTTCATTGTCAACACATCAGTACAATCCATTTTGCACACTCA-AATACCTATAGTTCA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321023 188 - 122678785 TATGCTTTGTACCATAATGTAGAATATGTGAGTATATAAATTCTCACTCTTAAGTTCCA---CCTCTGACCACAGAAACTTATCAATATCATAGAAGAGGGCTTCTGACTTCCCAGATAGGGTCAACACA-ACTTTTCAATGTCAACATATTACTGTAACCTATTTTGAATACCCATAATATCTACAGGTTG i canFam3.chr1 I 195 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=724620.000000 s hg38.chr18_GL383571v1_alt 147181 63 + 198278 ACAGAGAGGGGCAATAAAGCTCGTATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT s panTro5.chr18 65057209 63 + 78221452 ACAGAGAGGGGCAATAAAGCTCGTATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176267 63 + 77229886 ACAGAGAGGGGCAATAAAGCTCGTATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395759 63 + 17472758 ACAGAGAAGGGCAATAAAGCTCGTATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436226 63 - 152096393 ACAGAGAGGGGCAATAAAGCTCGTATATAAAAGAATCAACACAATAGTGGGATATAA--------------------CTGCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386302 63 + 70235451 ACAGAGAGGGGCAATAAATCTCATATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077708 63 - 75711847 ACAGAGAGGGGCAATAAATCTCATATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636899 63 - 18804593 ACAGAGAGGGGCAATAAATCTCATATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248729 61 + 18905526 AC--AGAGGGGCAATAAAGCTCATATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077038 63 - 72318688 ACAGAGAGGGGCCATAAAGCTCATCTATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414099 63 - 1517660 ACAGAGAGGGGCAATAAAGCTCATATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510213 63 + 6513552 ACAGAGAGGGGCAATAAAGCTCGTATATAAAAGAATCAACACAATAGTGGTATATAA--------------------CTGCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280030 63 + 117903854 ACAAAGAGGGACAATAAAGCTCATATATGCAAGAATCAACACAAGAGTGATTTATAA--------------------CTGCTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467741 63 - 31320352 ACAAAGAGGAACAATAAAGCTCATACATGCAAGGATCAGCACAATAGTGGTTTATAA--------------------CTGCTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663539 63 + 2203405 ACAAAGAGGGACAATAAAGCTCATATATGCAAGAATCAACACAATAGTGGTTTATAA--------------------CTGCTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616100 63 - 14941987 ACAAAGAGGGACAATAAAGCTCATATGTGCAAGAATCAACACAATAGTGGTTTATAA--------------------CTGCTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41532915 62 + 83067054 ATAGGTAG-GGCAGTAGAACTGGCATATGCAAGTATCAACACAATAGTGGTTTCTAA--------------------CTGCCT i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11241921 63 - 20685099 ATATGTAGTGGTCGCAGAACTGGCTTATACAAGTGTCAGTACAATAACGGTTTCTAA--------------------CTGCCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321211 83 - 122678785 ATAAGTGAGGGAAGTAGAGTTGGCATGTGCAAGAATCAGCATAATAggggcacctggtggctcaattggttaaacgtctgcct i canFam3.chr1 C 0 I 142 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1272980 198 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=69910.000000 s hg38.chr18_GL383571v1_alt 147244 6 + 198278 AGAGAC s panTro5.chr18 65057272 6 + 78221452 AGAGAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176330 6 + 77229886 AGAGAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395822 6 + 17472758 AGAGAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436289 6 - 152096393 AGAGAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386365 6 + 70235451 AGAGAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077771 6 - 75711847 AGAGAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636962 6 - 18804593 AGAGAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248790 6 + 18905526 AGAGAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077101 6 - 72318688 AGAGAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414162 6 - 1517660 AGAGAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510276 6 + 6513552 AGAGAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280093 6 + 117903854 ACAGAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467804 6 - 31320352 ACAGAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663602 6 + 2203405 ACAGAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616163 6 - 14941987 ACAGAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41532977 6 + 83067054 ACAGAC i micMur3.chr19 C 0 I 117 s otoGar3.GL873546 11241984 6 - 20685099 GCAGAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321436 6 - 122678785 AAAAAT i canFam3.chr1 I 142 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1272980 198 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=1301599.000000 s hg38.chr18_GL383571v1_alt 147250 130 + 198278 ----AACTAATGCAAG-------GATGTG-GGAACAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGGCTGACTCGCTATTGAGGGTATGTGCCCCACTAGCATAGTACTATG---ACACTCAGTCCTACTTCAGAGGTGCACACT-- s panTro5.chr18 65057278 130 + 78221452 ----AACTAATGCAAG-------GATGTG-GCAACAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGGCTGACTCGCTATTGAGGGTATGTGCCCCTCTAGCATAGTACTATG---ACACTCAGTCCTACTTCAGAGGTGCACACT-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176336 130 + 77229886 ----AACTAATGCAAG-------GATGTG-GCAACAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGGCTGACTCGCTATTGAGGGTATGTGCCCCTCTAGCATAGTACTATG---ACACTCAGTCCTACTTCAGAGGTGCACACT-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395828 130 + 17472758 ----AACTAATGCAAG-------GATGTG-GCAACAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AAGGCTGACTCGCTATTGAGGGTATGTGCCCCACTAGCATAGTACTATG---ACACTCAGTCCTACTTCAGAGGTGCACACT-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436295 130 - 152096393 ----AACTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGGCTGACTCTCTATTGAGGGTATGTGCCCCACTAGCATAGTACTATG---ACACTCAGTCCTACTTCAGAGGTGCACACT-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386371 128 + 70235451 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGACTGACTCTCTATTGAGGGTATGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077777 128 - 75711847 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGACTGACTCTCTATTGAGGGTATGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13636968 128 - 18804593 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGACTGACTCTCTATTGAGGGTATGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248796 128 + 18905526 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGACTGACTCTCTATTGAGGGTACGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077107 128 - 72318688 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGACTGACTCTCTATTGAGGGTATGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414168 128 - 1517660 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ATAAACAAT----CACACACA---------------------------------------AGGACTGACTCTCTATTGAGGGTACGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510282 127 + 6513552 ----AAGTAATGCAAG-------GATGTG-GCAGCAATATCCAATA---ACAAACAAT----CACACACA---------------------------------------AGGACTGACTCTC-ACTGAGGGTATGTGCCCCATTAGCATAGTACTATG---ACACTCAGCCCTACTTCAGAGGTG--CACT-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280099 127 + 117903854 ----AACTAATGCAAG-------GATGTG-GCAGCCATATCCAA-A---ATAAACGAT----CACACACA---------------------------------------AGGACTTACTCTCCATTGAGGTTATGTGCCTCACTATCACAGTACTATG---ACACTCAGTCCTATTTCAGAAGTG--CACA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467810 125 - 31320352 ----AACTAATGCAAG-------GATGTG-GCAGCAATACCCAA-A---ATAAACAAT----CACACACA---------------------------------------AGGACTTACTCTCCATTGAGGGCATGTGCCTCACTATCACAGTAC--TG---ACACTCAGTCCTACTTCAGAAGTG--CACA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663608 131 + 2203405 ----AACTAATGCAAG-------GATGTG-GCAGCCATATCCAA-A---ATAAACAATCATCCACACACA---------------------------------------AGGACTTACTCTCCATTGAGGGTATGTGCCTCACTATCACAGTACTATG---ACACTCAGTCCTACTTCAGAAGTG--CACA-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616169 127 - 14941987 ----AACTAATGCAAG-------GATGTG-GCAGCAATATCCAA-A---ATAAACAAT----CACACACA---------------------------------------AGGACTTACTCTCCATTGAGGGTATGTGCCTCACTATCACAGTACTATG---ACACTCAGTCCTACTTCAGAAGTG--CACA-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11241990 133 - 20685099 ----CACCAACGCAGA-------GGTGTGAACAGAAATATTCAAGA---AAAGCCAGT----CACAGAGA---------------------------------------AGGATTC-CTCACCACTGAAGGTGTGTGCCCTACCAGCACAGCACTATGGCAACAACTGGTCCTACGGCAGGGGAACAAACT-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321442 183 - 122678785 ATCTAACAAAGGAAAAAAGTATCAACACA-GTAGTAATTTCTAATATATATAGTGAAC----CACACCTAGTAAGAATGTAGAGAGCAATGCCAAAGGAAAATCATCAGGGAACGGAATTTCTATCAATGGTATGAATCCTACTACCATAGGTCTGCA---GCAGTTGGACCCAATACAGACGGG--CATTCT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41532983 117 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1272980 198 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=94884.000000 s hg38.chr18_GL383571v1_alt 147380 7 + 198278 CTCCTAC s panTro5.chr18 65057408 7 + 78221452 CTCCCAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176466 7 + 77229886 CTTCCAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395958 7 + 17472758 CTCCCAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436425 7 - 152096393 CTCCCAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386499 7 + 70235451 CTCCCAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077905 7 - 75711847 CTCCCAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637096 7 - 18804593 CTCCCAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248924 7 + 18905526 CTCCCAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077235 7 - 72318688 CTCCCAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414296 7 - 1517660 CTCCCAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510409 7 + 6513552 CTCCCAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280226 7 + 117903854 CTCCCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467935 7 - 31320352 CTCCCAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663739 7 + 2203405 CTCCCAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616296 7 - 14941987 CTCCCAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41533100 7 + 83067054 CTCCTGT i micMur3.chr19 I 117 C 0 s otoGar3.GL873546 11242123 7 - 20685099 CTCTCAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321625 7 - 122678785 CTTTTGC i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1272980 198 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=770951.000000 s hg38.chr18_GL383571v1_alt 147387 50 + 198278 TCTCCTCACTGAAAGGTGGAGTTTCTGACTGGAGCCTCTGGAATTTGCTC s panTro5.chr18 65057415 50 + 78221452 TCTCCTCACTGAAAGGTGGAGTTTCTGACTGGAGCCTCTGGAATTTGCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176473 50 + 77229886 TCTCCTCACTGAAAGGTGGAGTTTCTGACTGGAGCCTCTGGAATTTGCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5395965 50 + 17472758 TCTCCTCACTGAAAGGTGGAGTTTCTGACTGGAGCCTCTGGAATTTGCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436432 50 - 152096393 TCTCCTTACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386506 50 + 70235451 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077912 50 - 75711847 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637103 50 - 18804593 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248931 50 + 18905526 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGACTCTGGAATTTGCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077242 50 - 72318688 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414303 50 - 1517660 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510416 50 + 6513552 TCTCCTCACTGAAAGGTTGAGTTTCTGACTGGAGGCTCTGGAATTTGCTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280233 50 + 117903854 TTTCCTCACTGAAAGGCTGAGTTTCTGGCTGGAGGCTCCAGAATTTGCTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467942 50 - 31320352 TTTCCTCACTGAAAGGCTGAGTTTCTGACTGGAGGCTCCAGAATTTGCTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663746 50 + 2203405 TTTCCTCACTGAAAGGCTGAGTTTCTGACTGGAGGCTCCGGAATTTGCTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616303 50 - 14941987 TTTCCTCACTGAAAGGCTGAGTTTCTGACTGGAGGCTCTGGAACTTGCTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41533107 50 + 83067054 TCTCCTCGATGAAAGGTTGAGTTTCTGGCTAGAGGATCTGGAATTTGCTC i micMur3.chr19 C 0 I 26 s proCoq1.NW_012148742v1 1273178 50 - 1406956 TCTCCTCACTGAAAGGTTGAGTTTCTGGCTAGAGGCTCTGGAATTTGCTC i proCoq1.NW_012148742v1 I 198 C 0 s otoGar3.GL873546 11242130 50 - 20685099 TCTCCCCACTAGAAGCTTGACTTTCTGACTAGAGGCACCAGAATTTGTTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321632 50 - 122678785 ACTCGTTGTTGGAAGGCTGAGTTTCTGGCTAGAGGCTCTGGAATTTACTC i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=147143.000000 s hg38.chr18_GL383571v1_alt 147437 11 + 198278 CTTGGTCCCAA s panTro5.chr18 65057465 11 + 78221452 CTTGGTCCCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176523 11 + 77229886 CTTGGTCCCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396015 11 + 17472758 CTTGGTCCCAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436482 11 - 152096393 CTTAGTCCCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386556 11 + 70235451 CTTGGTCCCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077962 11 - 75711847 CTTGGTCCCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637153 11 - 18804593 CTTGGTCCCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248981 11 + 18905526 CTTGGTCCCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077292 11 - 72318688 CTTGGTCCCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414353 11 - 1517660 CTTGGTCCCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510466 11 + 6513552 CTTGGTCCCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280283 11 + 117903854 CTGGGTCCTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19467992 11 - 31320352 CTGGGTCCCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663796 11 + 2203405 CTGGGTCCCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616353 11 - 14941987 CTGGGTCCCCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1273228 11 - 1406956 CTGGGTCCCAA i proCoq1.NW_012148742v1 C 0 I 205 s otoGar3.GL873546 11242180 11 - 20685099 CTGGGTCCCAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321682 11 - 122678785 TTGGGTCCCCA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533157 26 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=193264.000000 s hg38.chr18_GL383571v1_alt 147448 19 + 198278 CATACA-AGCCATGAAAA--AG s panTro5.chr18 65057476 19 + 78221452 CATATA-AGCCATGAAAA--AG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176534 19 + 77229886 CATATA-AGCCATGAAAA--AG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396026 19 + 17472758 CATACA-ACCCATGAAAA--AG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436493 19 - 152096393 CGTACA-AGCCATGAAAA--AG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386567 19 + 70235451 CGTACA-AGCCACGAAAA--AG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077973 19 - 75711847 CGTACA-AGCCACGAAAA--AG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637164 19 - 18804593 CGTACA-AGCCACGAAAA--AG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13248992 19 + 18905526 CGTACA-AGCCACGAAAA--AG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077303 19 - 72318688 CGTACA-AGCCACGAAAA--AG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414364 19 - 1517660 CGTACA-AGCCACGAAAA--AG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510477 19 + 6513552 CATACA-AGCCACGAAAG--AG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280294 19 + 117903854 TATACA-AGCCATGAAAA--AG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468003 19 - 31320352 TATACA-AGCCATGAAAA--AG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663807 19 + 2203405 TATATA-AGCCATGAAAA--AG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616364 19 - 14941987 TATACA-AGCTATGAAAA--AG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11242191 18 - 20685099 -TCACC-AGCCATGGGAG--AA i otoGar3.GL873546 C 0 I 2 s canFam3.chr1 112321693 20 - 122678785 --TATAGAGCCATGGAAGTCAG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533157 26 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273239 205 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=400951.000000 s hg38.chr18_GL383571v1_alt 147467 30 + 198278 AAAGCATCCAAACCTACAAAGCACCAACCA s panTro5.chr18 65057495 30 + 78221452 AAAGCATCCAAACCTACAAAGCACCAACCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176553 30 + 77229886 AAAGCATCCAAACCTACAAAGCACCAACCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396045 30 + 17472758 AAAGCATCCAAACCTACAAAGCACCAACTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436512 30 - 152096393 AAAGCATCCAAACCTACAAAGCACCAACCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386586 30 + 70235451 CAAGCATTCAAACTTACAAAGCACCAACCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63077992 30 - 75711847 CAAGCATTCAAACTTACAAAGCACCAACCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637183 30 - 18804593 CAAGCATTCAAACTTACAAAGCACCAACCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249011 30 + 18905526 CAAGCATTCAAACTTACAAAGCACCAACCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077322 30 - 72318688 CAAGCATTCAAACTTACAAAGCACCAACCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414383 30 - 1517660 CAAGCATTCCAACTTACAAAGCACCGACCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510496 30 + 6513552 AAAGCATTCAAACTTACAAAGCACCAACCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280313 30 + 117903854 AAAGCATCCAAACTTAAAAAGCACCAACCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468022 30 - 31320352 AAAGCATCCAAACTTAAAAAGCACCAACCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663826 30 + 2203405 CAAGCAACCAAACTTAAAAAGCACCAACCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616383 30 - 14941987 AAAGCATCCAAACTTAAAAAGCACCAACCA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41533183 30 + 83067054 AAAGCATCTAAACTTACAAAGCACCAACCA i micMur3.chr19 I 26 I 155 s otoGar3.GL873546 11242211 30 - 20685099 AAAGCATCGAAACTTAAAAAGTACCAACCA i otoGar3.GL873546 I 2 C 0 s canFam3.chr1 112321713 30 - 122678785 AAAGCATCCAAACTTACCAAGAATCAACTA i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273239 205 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=49414.000000 s hg38.chr18_GL383571v1_alt 147497 4 + 198278 AAAG s panTro5.chr18 65057525 4 + 78221452 AAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176583 4 + 77229886 AAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396075 4 + 17472758 AAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436542 4 - 152096393 AAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386616 4 + 70235451 AAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078022 4 - 75711847 AAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637213 4 - 18804593 AAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249041 4 + 18905526 AAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077352 4 - 72318688 AAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414413 4 - 1517660 AAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510526 4 + 6513552 AAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280343 4 + 117903854 AAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468052 4 - 31320352 AAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663856 4 + 2203405 AAAG i cebCap1.NW_016107689v1 C 0 I 15 s aotNan1.NW_018502140v1 3616413 4 - 14941987 AAAG i aotNan1.NW_018502140v1 C 0 I 15 s otoGar3.GL873546 11242241 4 - 20685099 GAAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321743 4 - 122678785 TAGG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533213 155 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273239 205 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=233791.000000 s hg38.chr18_GL383571v1_alt 147501 39 + 198278 ATGAGATACTGTAGAATTTTATTGCTACCCAAAAAATAT s panTro5.chr18 65057529 39 + 78221452 ATGAGATACTGTAGAATTTTACTGCTACCCAAAAAATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176587 39 + 77229886 ATGAGATACTGTAGAATTTTACTGCTACTCAAAAAATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396079 39 + 17472758 ATGAGATACTGTAGAATTTTACTGCTACCCAAAAAATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436546 37 - 152096393 ATGAGGTACTGTAGAATTTTACTGCTACCCAAAAA--AT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386620 39 + 70235451 ATGAGATACTGTAGAATTTTACCGCAACCCCAAAAATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078026 39 - 75711847 ATGAGATACTGTAGAATTTTACCGCAACCCCAAAAATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637217 39 - 18804593 ATGAGATACTGTAGAATTTTACCGCAACCCCAAAAGTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249045 39 + 18905526 ATGAGATACTGTAGAATTTTACCGCAACCCCAAAAATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077356 39 - 72318688 ATGAGATACTGTAGAATTTTACCGCAACCCCAAAAATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414417 39 - 1517660 ATGAGATACTGTAGAATTTTACCGCAACCCCAAAAATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510530 39 + 6513552 ATGAGGTACTGTAGAATTTTACCGCAACCCCAAACATAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280347 15 + 117903854 ----------------------CACAACCCCCAAAAT-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468056 15 - 31320352 ----------------------CACAACCCCCAAAAT-- i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11242245 38 - 20685099 ATGAGGTACTAAAGAACTTAACATCAAC-AAAAGAATAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321747 38 - 122678785 ATAAGAAACTGTAGAATTTTACCCCAGC-CGAAGAATAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533213 155 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273239 205 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e aotNan1.NW_018502140v1 3616417 15 - 14941987 I e cebCap1.NW_016107689v1 1663860 15 + 2203405 I a score=1047699.000000 s hg38.chr18_GL383571v1_alt 147540 107 + 198278 GTGTGAATAGCCTGTGAATTAACAGAAAAGTTCATTCTAGGTAC--TTAATAGTTT--TATATTGATATAATCCTCTGTTATGTATGGTGTTAAGG---TAATATATACATATA s panTro5.chr18 65057568 105 + 78221452 GTGTGAATAGCCTGTGAATTAACAGAAAAGTTCATTCTAGGTAC--TTAATAGTTT--TATATTGATATAATC--CTGTTATGTATGGTGTTAAGG---TAATATATACATATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176626 107 + 77229886 GTGTGAATAGCCTGTGAATTAACAGAAAAGTTCATTCTAGGTAC--TTAATAGTTT--TATATTGATATAATCCTCTGTTATGTATGGTGTTAAGG---TAATATATACATATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396118 107 + 17472758 GTGTGAATAGCCTGTGAATTAACAGAAAAGTTCATTCTAGGTAC--TTAATAGTTT--TATATTGATATAATCCTTTGTTATGTATGGTGTTAAGG---TAATATATACATATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436583 109 - 152096393 GTGTGAATAGCCTGTGAATTAACAGAAAAGTTCATTCTAGGTACATGTAATAGTTT--TATATTGATATAATCCTCTGTTACGTATGGTGTTAAGG---CAATATATACATATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386659 109 + 70235451 GTGTGACTAGCCTGTGACTTAACAGAAAAGTTCATTCTACGTAGATGTAATAGTTT--TATATTGATACAATCCTCTGTTATGTATGGTGTTAAAG---TAATATATACATATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078065 109 - 75711847 GTGTGACTAGCCTGTGACTTAACAGAAAAGTTCATTCTACGTAGATGTAATAGTTT--TATATTGATACAATCCTCTGTTATGTATGGTGTTAAAG---TAATATATACATATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637256 109 - 18804593 GTGTGACTAGCCTGTGACTTAACAGAAAAGTTCATTCTACGTAGATGTAATAGTTT--TATATTGATACAATCCTCTGTTATGTATGGTGTTAAAG---TAATATATACATATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249084 109 + 18905526 GTGTGAATAGCCTGTGACTTAACAGAAAAGTTCATTCTACGTAGATGTAATAGTTT--TATATTGATACAATCCTCTGTTATGTATGGTGTTAAAG---TAATATATACATATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077395 109 - 72318688 GTGTGAATAGCCTGTGACTTACCAGAAAAGTTCATTCTACATAGATGTAATAGTTT--TATATTGATACAATCCTCTGTTATGTATGGTGTTAAAG---TAATATATACATATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414456 109 - 1517660 GTGTGAATAGCCTGTGACTTAACAGAAAAGTTCATTCTACGTAGATGTAATAGTTC--TATATTGATACAATCCTCTGTTATGTATGGTGTTAAAG---TAATATATACATATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510569 109 + 6513552 GTGTGAATAGCCTGTGACTTAACAGAAAAGTTCATTCTACATAGATGTAATAGTTT--TATATTGATATAATCCTCTGTTATGTATGGTGTTAAAG---TAATatatacatata i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280362 109 + 117903854 GTGTGAATATCCTGTGAATTAACAGAAAAGATCACTCTACATAGATT---TAATTT--TATATTGATATACTCCTCTGTTATGTATGGTGTTAAGGTAATAATATATAGATACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468071 110 - 31320352 GTGTGAATATCCTGTGAATTAACAGAAAAGATCACTCTAGGTAGATTTAATAATTT--TATATTGATATAATCCTT--TTATGTATGGTGTTAAGGTAATAATATATAGATACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663875 112 + 2203405 GTGTGAATATCCTGTGAATTAACAGAAAAGATTGCTCTAGGTAGATTTAATAATTT--TATATTGATATAATCCTCTGTTATGTATGGTGTTAAGGTAATAATATATAGATACA i cebCap1.NW_016107689v1 I 15 C 0 s aotNan1.NW_018502140v1 3616432 112 - 14941987 GTGTGAATATCCTGTGAATTAACAGAAAAGATCATTCTAGGTAGACTTGATCATTT--TATATTGATATAAGCCTCTGTTATGTATGGTGTTAAGGTAATAATATATAGATACA i aotNan1.NW_018502140v1 I 15 C 0 s otoGar3.GL873546 11242283 86 - 20685099 GTGTGAATGACATGTGAATTAAC--AAACATTTATTACAGATGCATTAGACAATTT--TACCTTAAGGTAA---------------------GAAA---TAATATGTACATAGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321785 97 - 122678785 GTGCAAATGACATGTGATTTAACAGAAAAAT--ATTCTTCACAGATCAAATAATTGTATATATTGATGCAATCTT------TGTTTGG------AG---TGATATTCCCACATA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533213 155 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273239 205 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=7020.000000 s hg38.chr18_GL383571v1_alt 147647 1 + 198278 -C s panTro5.chr18 65057673 1 + 78221452 -C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176733 1 + 77229886 -C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396225 1 + 17472758 -C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436692 1 - 152096393 -C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386768 1 + 70235451 -C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078174 1 - 75711847 -C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637365 1 - 18804593 -C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249193 1 + 18905526 -C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077504 1 - 72318688 -C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414565 1 - 1517660 -C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510678 1 + 6513552 -c i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280471 1 + 117903854 -C i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468181 1 - 31320352 -C i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663987 1 + 2203405 -C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616544 1 - 14941987 -C i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1273444 1 - 1406956 -C i proCoq1.NW_012148742v1 I 205 C 0 s otoGar3.GL873546 11242369 1 - 20685099 -C i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112321882 1 - 122678785 G- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533213 155 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=676141.000000 s hg38.chr18_GL383571v1_alt 147648 55 + 198278 ATTTATATGTAATTTGAATACACTTCCTCCAACTGGTTTCCATTTATTCTATCAT s panTro5.chr18 65057674 55 + 78221452 ATTTATATGTAATTTGAATACACTTCCTCCAACTGGTTTCCATTTATTCTATCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176734 55 + 77229886 ATTTATATGTAATTTGAATACACTTCCTCCAACTGGTTTCCATTTATTCTATCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396226 55 + 17472758 ATTTATATGTAATTTGAACACACTTCCTCCAACTGGTTTCCATTTATTCTATCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436693 55 - 152096393 ATTTACATGTAATCTGAATACACTTCCTCCAACTGGTTTCCATTTATTCTATCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386769 55 + 70235451 ATTGATATGTCATTTGAATATACTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078175 55 - 75711847 ATTGATATGTCATTTGAATATACTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637366 55 - 18804593 ATTGATATGTCATTTGAATATACTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249194 55 + 18905526 ATTGATATGTAATTTGAATATACTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077505 55 - 72318688 ATTGATATGTAATTTGAATATACTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414566 55 - 1517660 ATTGATCTGTAATTTGAATATACTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510679 55 + 6513552 attgatatataatttgaatatacTTCCTCCAACTGGTTTCAGTTTATTCTATCAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280472 53 + 117903854 ATTTATATGTAATTTGAATACACTTCCTCCAACTGGTTTC--TTTCTTCCATCAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468182 55 - 31320352 ATTTATATGTAATTTGAATACACTTCCTCCAACTGGTTTCTATTTCTTCCATCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1663988 55 + 2203405 ATTTATATGTAATTTGAATGCACTTCCTGCAACTGGTTTCTATTTCTTCCATCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616545 55 - 14941987 ATTTATATGTAATTTGAATACACTTCCTCCAACTGGTTTCTATTTCTTCCATCAT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41533368 55 + 83067054 ATTTATATGTGATATGAATATACTTCCTTCAATTGGTTTCCATTTATTCCATTAT i micMur3.chr19 I 155 I 3 s proCoq1.NW_012148742v1 1273445 55 - 1406956 ATTTATATGTAATATGAATACACTTCCTCCAATTGGTTTCCTTTTATTCCATCAT i proCoq1.NW_012148742v1 C 0 I 888 s otoGar3.GL873546 11242370 54 - 20685099 GTTAATTTGTAATATGAACACACTTCCTCCAGCT-GTTCCCATTTATCCCAGCGT i otoGar3.GL873546 C 0 I 2 s canFam3.chr1 112321883 33 - 122678785 -----------TCTTAAATA------CCTCAGCT--TTCATGCTCACTTCAT--- i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=257000.000000 s hg38.chr18_GL383571v1_alt 147703 21 + 198278 AGTCAGTGGAGTAAATGTAAT s panTro5.chr18 65057729 21 + 78221452 AGTCAGTGGAGTAAATGTAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176789 21 + 77229886 AGTCAGTGGAGTAAATGTAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396281 21 + 17472758 AGTCAGTGGAGTAAATGTAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436748 21 - 152096393 AGTCAGTGGAGTAAATGTAAT i nomLeu3.chr4 C 0 I 1 s rheMac8.chr18 57386824 21 + 70235451 AGTCAGTGGAGTAAATGTAAT i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63078230 21 - 75711847 AGTCAGTGGAGTAAATGTAAT i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13637421 21 - 18804593 AGTCAGTGGAGTAAATGTAAT i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13249249 21 + 18905526 AGTCAGTGGAGTAAATGTAAT i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60077560 21 - 72318688 AGTCAGTGGAGTAAATGTAAT i chlSab2.chr18 C 0 I 1 s manLeu1.NW_012106698v1 414621 21 - 1517660 AGTCAGTGGAGTAAATGTAAT i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3510734 21 + 6513552 AGTCAGTGGAGTAAATGTAAT i colAng1.NW_012115433v1 C 0 I 1 s calJac3.chr13 105280525 21 + 117903854 AGCCAATGGAGTAAATGTAAT i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19468237 21 - 31320352 AGCCAATGGGGTAAATGTAAT i saiBol1.JH378121 C 0 I 1 s cebCap1.NW_016107689v1 1664043 21 + 2203405 AGCCTATGGGGTAAATGTAAT i cebCap1.NW_016107689v1 C 0 I 1 s aotNan1.NW_018502140v1 3616600 21 - 14941987 AGCCAATGGAGTAAATGTAAT i aotNan1.NW_018502140v1 C 0 I 1 s micMur3.chr19 41533426 21 + 83067054 AGCCAGTGGAGTAAATGTAAT i micMur3.chr19 I 3 I 754 s otoGar3.GL873546 11242426 21 - 20685099 TCCCGGGGCAGTAAATATAAT i otoGar3.GL873546 I 2 I 11 s canFam3.chr1 112321916 10 - 122678785 AGTAAGTGGA----------- i canFam3.chr1 C 0 C 0 e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=597015.000000 s hg38.chr18_GL383571v1_alt 147724 63 + 198278 TTCTAAAACAAGCTGAG-TTTATGTATAC---TTAACTGGAAAAAATTGAAATGGAAAAAATACAAT s panTro5.chr18 65057750 63 + 78221452 TTCTAAAACAAGCTGAG-TTTATGTATAC---TTAACTAGAAAAAATTGAAATGGAAAAAATACAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176810 63 + 77229886 TTCTAAAACAAGCTGAG-TTTATGTATAC---TTAACTAGAAAAAATTGAAATGGAAAAAATACAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396302 63 + 17472758 TTCTAAAACAAGCTGAG-TTTATGTATAC---TTAACTGGAAAAAATTGAAATGGAAAAAATACAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436770 63 - 152096393 TTCTAAAACAAGCTGAG-TTTACGTATAC---TTAAGTGGAAAAAATTGAAATGGAAAAAATACAAT i nomLeu3.chr4 I 1 C 0 s rheMac8.chr18 57386846 63 + 70235451 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAATTGAAATGG-AAAAATACAAT i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63078252 63 - 75711847 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAATTGAAATGG-AAAAATACAAT i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13637443 63 - 18804593 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAATTGAAATGG-AAAAATACAAT i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13249271 63 + 18905526 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAATTGAAATGG-AAAAATACAAT i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60077582 63 - 72318688 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAATTGAAATGG-AAAAATACAAT i chlSab2.chr18 I 1 C 0 s manLeu1.NW_012106698v1 414643 63 - 1517660 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAATTGAAATGG-AAAAATACAAT i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3510756 63 + 6513552 TTCTAAAACATGTTGAGCTTTATGTATAC---TTAAGTGGAAAAAACTGAAATGG-AAAAATACAAT i colAng1.NW_012115433v1 I 1 C 0 s calJac3.chr13 105280547 61 + 117903854 TTCTAAAATATGCTGAGCTTTATTTATAC---ATAAGTGGAAAAAATTGAAATGGAAAAAATAC--- i calJac3.chr13 I 1 I 6 s saiBol1.JH378121 19468259 64 - 31320352 TTGTAAAATATGCTGAGCTGTATTTATAC---TTAAGTGGAAAAAATTGAAATGGAAAAaatacaat i saiBol1.JH378121 I 1 I 6 s cebCap1.NW_016107689v1 1664065 64 + 2203405 TTCTAAAATATGCTGAACTTTATTTATAC---TTAAGTGGAAAAAACTGAAATGGAAAAaatacaat i cebCap1.NW_016107689v1 I 1 I 6 s aotNan1.NW_018502140v1 3616622 64 - 14941987 TTCTAAAATATGCTGAGCTTTATTTACAC---TTAAGTGGAAAAAATTGAAATGGAAAAaatacaat i aotNan1.NW_018502140v1 I 1 I 6 s otoGar3.GL873546 11242458 67 - 20685099 CTCTTAGGCACAGCCAGCTATAGGCATACGTAGTAAGTGGGAAAAATTAAGGTAGAAAAaatacagt i otoGar3.GL873546 I 11 I 70 s canFam3.chr1 112321926 25 - 122678785 ------------------------------------------AAAAATAAAATAGAAAAAATGCAAT i canFam3.chr1 C 0 I 6 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I a score=690961.000000 s hg38.chr18_GL383571v1_alt 147787 66 + 198278 AAtgtagacaatcacaaatatatgcctatcaaatgaaggtacgaatgcagttatgcttaatgttat s panTro5.chr18 65057813 66 + 78221452 AAtgtagacaatcacaaatatatgcctatcaaatgaaggtacgaatgcagttatgcttaatgttat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176873 66 + 77229886 AAtgtagacaatcacaaatatatgcctatcaaatgaaggtacgaatgcagttatgcttaatgttat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396365 66 + 17472758 AAtgtagacaatcacaaatatatgcctatcaaatgaaggtacgaatgcagttatgcttaatgttat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436833 66 - 152096393 AAtgtagacaatcacaaatatatgcctatcaaatgaaggtatgaacgcagttatgcttaatgttat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386909 66 + 70235451 AATGCAGACAatcacaaatacatgtctatcaaaagaaggtatgaatgcagttatgcttaatgttat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078315 66 - 75711847 AATGCAGACAATCACAAATACATGTCTATCAAAAGAAGGTATGAATGCAGTTATGcttaatgttat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637506 66 - 18804593 AATGCAGACAatcacaaatacatgtctatcaaaagaaggtataaatgcagttatgcttaatgttat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249334 66 + 18905526 AATGCAGACAatcacaaatatatgtctatcaaaagaaggtatgaatgcagttatgcttaatgttat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077645 66 - 72318688 AATGCAGACAATCACAAATATATGTCTGTCAAAAGAAGGTATGAATGCAGTTATGcttaatgttat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414706 66 - 1517660 AATGCAGACAatcacaaatatatgtctatcaaaagaaggtatgaatgcagttatgcttaatattac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510819 66 + 6513552 AATGCAGACAatcacaaatatatgtctatcaaaagaaggtatgaatgcagttatgcttaatgttat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280614 64 + 117903854 aatgtagacaatcacaaatatatatctatcaaatgaaggtatga--acagttatacttaatgttat i calJac3.chr13 I 6 C 0 s saiBol1.JH378121 19468329 66 - 31320352 aatgtagacaatcacaaatatatatctatcaaatgaaggtatgaacacagttatgcttaacgttat i saiBol1.JH378121 I 6 C 0 s cebCap1.NW_016107689v1 1664135 66 + 2203405 aatgtagacaatcacaaatatatgtctatcaaatgaaggtatgaacacagttatgcttaatgttat i cebCap1.NW_016107689v1 I 6 C 0 s aotNan1.NW_018502140v1 3616692 66 - 14941987 aatgtagacaatcacaaatatatatctatcaaatgaaggtataaacacagttatgcttaatgttac i aotNan1.NW_018502140v1 I 6 C 0 s canFam3.chr1 112321957 52 - 122678785 AATACAGAAGATCACAAGTAT----CTGTTGAATGAAGGTATGG----------GCATAAAGTTAT i canFam3.chr1 I 6 I 14 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e otoGar3.GL873546 11242525 70 - 20685099 I a score=2579043.000000 s hg38.chr18_GL383571v1_alt 147853 311 + 198278 gcaaatggcacctgtggccgggcagggtggctcgtgcctataatcctagcactttaggaggatgacggggcagattacctgaggtcaggagtttgagaccagtctggccaatatggcaaaaccctgtctctactaaaaatacaaaaaaatcagcttgatgtggtggtgggtgcctataatctcagctactccagaggctgaggcacaagaatcgcttgaacccgggaggcggaggttgcagtgagccaatattgtgccacggcac---tccagcctgggtg------acag---gactctgtctcca-agaagaaaag---------aaaaaa s panTro5.chr18 65057879 313 + 78221452 gcaaatggcacctgtggccgggcagggtggctcatgactataatcctagcactttaggaagatgacggggcagattacctgagatcaggagttcaagaccagtctggccaatatggcaaaaccctgtctctactaaaaatacaaaaaaatcagcttgatgtggtggtgggtgcctataatctcagctactccagaggctgaggcacaagaatcgcttgaacccgggaggcggaggttgcagtgagccaatattgtgccacggcac---tccagcctgggtg------acag---gactctgtctcca-agaagaaaag--aa-----aaaaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64176939 315 + 77229886 gcaaatggcacctgtggccaggcagggtggctcatgactataatcctagcactttaggaagatgacggggcagattacctgagatcaggagttcaagaccagtctggccaatatggcaaaaccctgtctctactaaaaatacaaaaaaatcagcttgatgtggtggtgggtgcctataatctcagctactccagaggctgaggcacaagaatcgcttgaacccgggaggcggaggttgcagcgagccaatattgtgccacggcac---tccagcctgggtg------acag---gactctgtctcca-agaagaaaagaaaa-----gaaaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396431 311 + 17472758 gcaagtgacacctgtggccgggcagggtgactcatgcctataatcctagcactttaggaggatgacggggcagattatctgaggtcaggagttcgagaccagtctggccaatatggcaaaaccctgtctctactaaaaatacaaaaaaatcagcttgatgtggtggtgggtgcctataatctcagctactccagaggctgaggcacaagaattgcttgaacccgggaggcggaggttgcagtgagccaatattgcgccactgcac---tccagcctgggtg------acag---gactctgtctcca-agaagaaaag---------aaaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139436899 310 - 152096393 gcaaatggcacctgtggccaggcagggtggctcatgcctataatcccagcactttgggaggatgacggggcggattacctgaagtcaggagttcaagaccagcctggccaacatggcaaaaccccgtctctactaaaaatacaaaaaaatcagctcaatgtggtggtgggtgcctataatcccagcgactccagaggctgaggcgcaagaatcgcttgaacccgggaggcggaggttgcagtgagctgatattgcgccactgcac---tctagcctgggtgac-agaacag---gactctgtctcca-agaa---------------aaaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57386975 308 + 70235451 gcaaatggcacctatggccgggcagggtggctcatgcctataatcccagcactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaaccccatctctact---aatacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctaccccagaggttgaggcacaagattcgcttgaacctgggaggtggaggttgcagtgagctgatatcacgccactgcactcctccagcctgggtgac-agagcgg---gactctgtctttg-aaa----------------aaaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078381 308 - 75711847 gcaaatggcacctatggccgggcagggtggctcatgcctataatcccagcactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaaccccatctctact---aatacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctaccccagaggttgaggcacaagattcgcttgaacctgggaggtggaggttgcagtgagctgatatcacgccactgcactcctccagcctgggtgac-agagcgg---gactctgtctttg-aaa----------------aaaaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637572 309 - 18804593 gcaaatggcacctatggccgggcagggtggctcatgcctataatcccaccactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaaccccatctctact---aatacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctactccagaggctgaggcacaagaatcgcttgaacctgggaggtggaggttgcagtgagctgatatcacgccactgcactcctccagcctgggtgac-agagcgg---gactctgtctttgaaaa----------------aaaaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249400 302 + 18905526 gcaaatggcacctatggccaggcagggtggctcatgcctataatcccagcactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaaccccatctctact---aacacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctactccagaggctaa----------tcgcttgaacctgggaggtggaggttgcagtgagctgatatcacgccactgcactcctccagcctgggtgac-agagcgg---gactctgtctaaa-aaaaat------------taaaaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60077711 310 - 72318688 gcaaatggcacctatggccgcgcagggtggctcacgcctataatctcagcactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaaccccatctctact---aatacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctactccagaggctgaggcacaagaatcgcttgaacctaggaggtggaggttgcagtgagctggtatcacgccactgcactcctccagcctgggtgac-agagcgg---gactctgtctaaa-aaaaa--------------aaaaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 414772 311 - 1517660 gcaaatggcacctatggctgggcagggtggctcatgcctgtaattccagcactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaaccccatctctact---aatacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctactccagaggctgaggcacaagaatcgcttgaacctgggaggtggaggttgcagtgagctgatatcacgccactgcactcctccagcctgggtgac-agagcgg---gactctgtctaaa-aaaaat-------------aaaaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3510885 327 + 6513552 gcaaatggcacatatggccaggcagggtggctcatgcctataatcccagcactttggaaggatgagggggtggtttacctgaattcaggagtttgagaccagcctggccaaca-ggcaaaacccgatctctactaaaaatacaaaaaaattagctggatgtggtggtggctgcctgtaatcccagctactccaggggctgaggcacaagaatcacttgaacctgggaggtggaggttgcagtgagctgatatcacgccactgcactcttccagcctgggtgac-agagcgg---gactctgtctaaa-aaaaaaaaaaaaaaaaaaaaaagaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280678 314 + 117903854 gcaaatggcacttgtggccaggcagggtggctcaggcatgcaatccaagcactttgggagtatgaggaggtggatttcctgaggtcaggagttcaagaccagcctgaccaacatggcaaaaccccatctctcctaaaaatacaaaaatgttagttgggcatgatggcaggctcctgtaatcctagctactcagaaggctggggcatgagaattgcctgaacccaggaggcagaggttgcagtcagctgataatatgccactgcac---tccagtctgggtgac-aaactgggatgactctgtctcaa-aaaat--------------aaataa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468395 311 - 31320352 gcaaatggcacttgtggccaggtagggtgactcatgcgtgcaatccaagcactttgggagtatgagggggtggattacctgaggtcaggagttcaagaccagcctaaccaatgtggcaaaaccctatctcttctaaaaatacaaaaatattagctgtgcatgatggcaggctcctgtaatcccagctactcaggaggctggggcatgagaactgcctgaacccaggaggcagaggttgcagtcagctgataatatgccactgcac---tccagcctgggtgac-aaactgggatgactccatctcaa-aa-----------------gaaaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1664201 313 + 2203405 gcaaatggcacttgtggccaggcagggtggctcatgcatgcaatccaagcactttgggagtatgagggggtggagtacctgaggtcaggagttcaagaccagcctgaccaacatggcaaaaccccatctctactaaaaatacaaaaatattagctgggcatgatggcaggctcctgtaattccagctactcaagaggctggggcatgagaattgcctgaacccaggaggcagaggttgcaatcagctgataatatgccactgcac---tccagcctgggcgacaaaactgggatgactctgtctcaa-aag----------------aaaaaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3616758 311 - 14941987 gcaaatggcacttgtggccaggcagggtggctcatgcgtgcaatccaagcactttgggagtatgagggggttgattacctgaagtcaggagttcaagaccagcctgaccaacatggcaaaaccccatctctactaaaaatacaaaaatattagctgggcatgatggcaggctcctgaaatcccagctactcaggaggctggggcatgaacattgcctgaacccaggagacagaggttgcagtcagctgataatatgccactgcac---tccagcctgggtgac-aaagtgggatgactctgtctcaa-aa-----------------gaaaaa i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112322009 14 - 122678785 I e otoGar3.GL873546 11242525 70 - 20685099 I a score=10215.000000 s hg38.chr18_GL383571v1_alt 148164 2 + 198278 aa s panTro5.chr18 65058192 2 + 78221452 aa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64177254 2 + 77229886 aa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396742 2 + 17472758 aa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139437209 2 - 152096393 aa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57387283 2 + 70235451 aa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078689 2 - 75711847 aa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637881 2 - 18804593 aa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249702 2 + 18905526 aa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60078021 2 - 72318688 aa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 415083 2 - 1517660 aa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3511212 2 + 6513552 ag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280992 2 + 117903854 at i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468706 2 - 31320352 ac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1664514 2 + 2203405 at i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3617069 2 - 14941987 at i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11242595 2 - 20685099 at i otoGar3.GL873546 I 70 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 493637 2362 - 2150887 I e canFam3.chr1 112322009 14 - 122678785 I a score=299678.000000 s hg38.chr18_GL383571v1_alt 148166 37 + 198278 aaaaagctcttgtgacatggaataaaact--gaatgaca s panTro5.chr18 65058194 37 + 78221452 aaaaagctcttgtgacatggaataaaact--gaatgaca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64177256 37 + 77229886 aagaagctcttgtgacatggaataaaact--gaatgaca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396744 37 + 17472758 acaaagctcttgtgacatggaataaaact--gaatgaca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139437211 37 - 152096393 aaaaagctcttgtgacatggaataaaact--gaacgaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57387285 31 + 70235451 ga------cttgtgacgtggaataaaact--gaatgaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63078691 31 - 75711847 ga------cttgtgacgtggaataaaact--gaatgaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637883 31 - 18804593 ga------cttgtgacgtggaataaaact--gaatgaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249704 31 + 18905526 ga------cttgtgacgtggaataaaacg--gaatgaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60078023 31 - 72318688 ga------cttgtgacgtggaataaaact--gaatgaca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 415085 31 - 1517660 ga------cttgtgacgtggaataaaacg--gaatgaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3511214 31 + 6513552 ga------gttgtgacgtggaataaaact--gaatgaca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105280994 36 + 117903854 aa-aagcatttgtgacatgggataaaact--gagtaaca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468708 36 - 31320352 aa-aagcatttgtgacatggaataaaact--gagtaaca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1664516 36 + 2203405 aa-aagcatttgtaacatggaataaaact--gaataaca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3617071 34 - 14941987 aa-aagcatttgtgacatggaataaaac----aataaca i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11242597 37 - 20685099 aaattgcccttgtgacataaaatgaaatc--gaataatg i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112322023 33 - 122678785 aaatggcacttgtgatatgaaata----c--gatttcca i canFam3.chr1 I 14 I 2 s dasNov3.JH575754 495999 39 - 2150887 aaatgacatctgtgacatggaataaaatttcaattgata i dasNov3.JH575754 I 2362 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111841129 11805 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=1764327.000000 s hg38.chr18_GL383571v1_alt 148203 173 + 198278 acatcaaacttgaattcagaaatgtttgtatctcaataaatctcagaaata-----agtatactttggaaaaagacaaaata-----------------------tggctctgg----aaatga---agatattgaaggtg----aagtgaaaggct-gaatcaaatttgtttactgaaatatgaagct-ta----------aaaaagcag--tatttctaaatc---a s panTro5.chr18 65058231 173 + 78221452 gcatcaaacttgaattcagaaatgtttgtatctcaataaatctcagaaata-----agtatactttggaaaaagacaaaata-----------------------tggctctgg----aaatga---agatattgaaggtg----aagtgaaaggct-gaatcaaatttgtttactgaaatatgaagct-ta----------aaaaagcag--tatttctaaatc---a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64177293 173 + 77229886 gcatcaaacttgaattcagaaatgtttgtatctcaataaatctcagaaata-----agtatactttggaaaaagacaaaata-----------------------tggctctgg----aaatga---agatattgaaggtg----aagtgaaaggct-gaatcaaatttgtttactgaaatatgaagct-ta----------aaaaagcag--tatttctaaatc---a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396781 173 + 17472758 gcatcaaacttgaattcagaaatgtttgtatctcaataaatctcagaaata-----agtatactttggaaaaagacaaaata-----------------------tggctctgg----aaatga---agatattgaaggtg----aagtgaaaggct-gaatcaaatttgtttactgaaatatgaagct-ta----------aaaaagcag--tatttctaaatc---a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139437248 173 - 152096393 gcatcaaacttgaattcagaaatgtttatatctcaataaatctcagaaaca-----aatatactttggaaaaagacaaaatg-----------------------cggctctgg----aaatga---agatattgaaggtg----aagtgaaaggct-gaataaaatctgtttactgaaatatgaagct-ta----------aaaaagcag--tatttctaaatc---a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57387316 172 + 70235451 gcatcagacttgaattcagaaatgtttatatctcaatatatctcagaagta-----aatatactttggaaaaagacaaaata-----------------------aggctctga----aaatga---agacattgaaggtg----aagtgaaaggct-gaataaaat-tctttactgaaatatgaacat-ta----------aaaagacag--tatttctaaatca--- i rheMac8.chr18 C 0 I 5 s macFas5.chr18 63078722 171 - 75711847 gcatcagacttgaattcagaaatgtttatatctcaatatatctcagaagta-----aatatactttggaaaaagacaaaata-----------------------aggctctga----aaatga---agacattgaaggtg----aagtgaaaggct-gaataaaat-tgtttactgaaatatgaacat-ta----------aaaagacag--tatttctaaatc---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13637914 171 - 18804593 gcatcagacttgaattcagaaatgtttatatctcaatatatctcagaagta-----aatatactttggaaaaagacaaaata-----------------------aggctctga----aaatga---agacattgaaggtg----aagtgaaaggct-gaataaaat-tgtttactgaaatatgaacat-ta----------aaaagacag--tatttctaaatc---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249735 172 + 18905526 gcatcagacttgaattcagaaatgtttatatctcaatatatctcagaagta-----aatatactttgtaaaaagacaaaata-----------------------aggctctga----aaatga---agatattgaaggtg----aagtgaaaggct-gaataaaat-tgtttactgaaatatgaacat-ta----------aaaaggcag--tatttctaaatc-a-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60078054 173 - 72318688 gcatcagacttgaattcagaaatgtttatatctcaatatatctcagaagta-----aatatactttggaaaaagacaaaata-----------------------aggctctga----aaatga---agatattgaaggtg----aagtgaaaggtt-gaataaaat-tgtttactgaaatatgaacat-ta----------aaaaggcagtatatttctaaatc---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 415116 171 - 1517660 gcatcagacttgaattcagaaatgtttatatctcaatatatctcagaagta-----aatatactttggaaaaagacaaaata-----------------------aggctctga----aaatga---agatattgaaggtg----aagtgaaaggct-gaacaaaat-tgtttactgaaatatgaacat-ta----------aaaaggcag--tatttctaaatc---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3511245 172 + 6513552 gcatcagacttgaattcagaaacgtttatatctcaatatatctcagaagta-----aatatactgtggaaaaagacaaaata-----------------------aggctctga----gaataa---agatattgaaggtg----aagtgaaaggtt-gaataaaat-tatttactgaaatatgaacat-ta----------gaagagcag--tatttctaaatc--a- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105281030 162 + 117903854 gcagcaaacatgaattcagaaatgtttatatctcagtaaatctcagaagta-----aatatgctttgagaaaagtcaaaata-----------------------tagctctgt----aaatga---agatactga---------aaatggaaggtt-gaataaaa-----ttgttgaaatatgaacat-ta----------aaaaagcag--gatttctaaatc---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468744 166 - 31320352 gcagcaaacatgaattcagaaatgtttatatctcaataaatctcagaagta-----aatatgctttgagaaaagtcaaaata-----------------------tggctctgt----aaatga---agatactaa---------aaatgaaaggtt-gaataaaat-tgtttgttgaaatatgaacat-ta----------acaaagcag--tatttctaaatc---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1664552 166 + 2203405 gcagcaaacatgaattcagaaatgtttatatctcaataaatctcagaagta-----aatatgctttgagaaaagtcaaaata-----------------------tggctctGT----AAatga---agatactga---------aaatgaaaggtt-gaataaaat-tgtttgttgaaatatgaacat-ta----------aaaaagcag--tatttctaaatc---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3617105 166 - 14941987 gcagcaaacatgaattcagaaatgtttatatctcaataaatctcagaagta-----aatatactttgagaaaaGTCAAAATA-----------------------TGGCTCTGT----AAATGA---AGATAATGA---------AAAtgaaagctt-gaataaaat-tgtttgttgaaatatgaacat-ta----------aaaaagcag--catttctaaatc---- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11242634 169 - 20685099 gcatcaaagatgaattcagaaagttccatagttccataaatcccagaaataaacataatatgctctg---aaagtaaaaaga-----------------------tagctctag----aaacaa---agatgctgaag-------taaacaaagttt-gaataaaat-tatttactaaaatatgagca--tg----------aaaaagcaa--tatttttaaatt---- i otoGar3.GL873546 C 0 I 4 s mm10.chr1 111852934 172 + 195471971 ACACTGTACTTGAATTCAGAAAGTTATGCAGTT-GATATATCACAAAAATA-----AATA-------GAAAATGTCATGGAA-----------------------AATCTTAGAAGTCAAATGAC--AGATATTG----------AAGAGAAAGTTT-GAACAAGC--TATAACTTGACATATGAGTATATAAAACATGCGTAAAAGGCAA--TATATCAAAATA---- i mm10.chr1 I 11805 I 4 s canFam3.chr1 112322058 198 - 122678785 gcatcacaattaaattcaaaatggtctctatctcaatgaaactcagtatat-----gatatgctctgggaaaaaaaaaaaaaaaaagaaaacagcaaaagacccgtggctctgg----aaaggacaaagacatggaagctgaactaagtgaaagttg-caatattttttttttcttgaaatgggaacat-aa----------a----gcac--tgctttcaatta---- i canFam3.chr1 I 2 I 1 s dasNov3.JH575754 496038 142 - 2150887 acatcatatataaatagaaaaatttccttatcttaaTAAAACTCCGAAGTT-----AA------------------ATGATA------------------------GTCATCAA----AGTTGA---AGATGT------------AAATGAATGGTCAGAATAAGAT---TTTGTtgaaatatggacat-ga----------aaaaaacag--catttatgaat----- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=17946.000000 s hg38.chr18_GL383571v1_alt 148376 26 + 198278 tattaatcatttctaaataatattgt s panTro5.chr18 65058404 26 + 78221452 tattaatcatttctaaataatattgt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64177466 26 + 77229886 tattaatcatttctaaataatattgt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396954 26 + 17472758 tattaatcatttctaaataatattgt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139437421 26 - 152096393 tattaatcatttctaaataatattgt i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63078893 7 - 75711847 ----------------aacatat--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13638085 10 - 18804593 ----------------aacatattga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249907 9 + 18905526 -----------------acatattga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60078227 10 - 72318688 ----------------aacatattga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 415287 10 - 1517660 ----------------aacatattga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3511417 9 + 6513552 -----------------acatattgt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105281192 10 + 117903854 ----------------aacatattgg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468910 10 - 31320352 ----------------aacatattgg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1664718 10 + 2203405 ----------------aacatattgg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3617271 10 - 14941987 ----------------aacatattag i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11242807 6 - 20685099 --------------------tattaa i otoGar3.GL873546 I 4 I 4 s mm10.chr1 111853110 6 + 195471971 --------------------TATTAA i mm10.chr1 I 4 I 4 s canFam3.chr1 112322257 8 - 122678785 ------------------tgcattaa i canFam3.chr1 I 1 I 4 s dasNov3.JH575754 496180 11 - 2150887 ---------------taatatattgt i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e rheMac8.chr18 57387488 5 + 70235451 I a score=2863305.000000 s hg38.chr18_GL383571v1_alt 148402 299 + 198278 gtaatttttattttacaagtttgtgcaactcaattaatacagtaagta----ctaaaa-----taggtggctgattagtatagatatctacatatcttaactatatatgtcaaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcatattttatat---tgg--tttttctctttgggcatataCTGTAAGAGAATAAAAGTAAATATACCTCTGCTGC-------------CTCTCTCTCTCTCT----CATAATTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT s panTro5.chr18 65058430 291 + 78221452 gtaatttttattttacaagtttgtgcaactc----aatacggtaagta----ctaaaa-----taggtggctgattagtatagatatctacatatcttaactatatatgtccaaattatttgaaattatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgg--tttttctctttgggcatataCTGTAAGAGAATAAAAGTAAATATACCTCTGCTGC-----------------CTCTCTCTCT----CATAATTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64177492 297 + 77229886 gtaatttttattttacaagtttgtgcaactc----aatacggtaagta----ctaaaa-----taggtggctgattagtatagatatctacatatcttaactatatatgtccaaattatttgaaattatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgg--tttttctctttgggcatataCTGTAAGAGAATAAAAGTAAATATACctctgctgc-----------ctctctctctctctct----cATAATTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5396980 295 + 17472758 gtaatttttattttacaagtttgtgcaactc----aatacagtaagta----ctaaaa-----taggtggctgattagtatagatatctacatatcttaactatatatgtccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgg--tttttctctttgggcatataCTGTAAGAGAATAAAAGTAAATATACCTCTGCTGC-------------CTCTCTCTCTCTCT----CATAATTAAGACAAGAATATTGGAGACGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139437447 293 - 152096393 gtaatttttattttacaagtttgtgtaactcaattaatac----agta----ttaaaa-----tacgtgcctgattagtatagatatctacatatcttaactatacatgcccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgg--tttttctctttgggcatataCTGTAAGAGAATAAAAGTAAATATACCTCTGCTGC---------------CTCTCTGTCTTT----CATAAGTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57387493 299 + 70235451 ttaatttttattttacaagtttatgcaactcaattaatacagtaatta----tcaaaa-----taggtgcctgattagtatagatatctacatatcttaactatatatgcccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgt--ttcttctctttgggcatataCTATAAGAGAATAAAAGTAAATATACCTCTACTGC-------------CTCTCTCTCTCTCT----CATCAGTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i rheMac8.chr18 I 5 C 0 s macFas5.chr18 63078900 298 - 75711847 -taatttttattttacaagtttatgcaactcaattaatacagtaatta----tcaaaa-----taggtgcctgattagtatagatatctacatatcttaactatatatgcccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgt--ttcttctctttgggcatataCTATAAGAGAATAAAAGTAAATATACCTCTACTGC-------------CTCTCTCTCTCTCT----CATCAGTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13638095 299 - 18804593 gtaatttttattttacaagtttatgcaactcaattaatacagtaatta----tcaaaa-----taggtgcctgattagtatagatatctacatatcttaactatatatgcccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgt--ttcttctctttgggcatataCTATAAGAGAATAAAAGTAAATATACCTCTACTGC-------------CTCTCTCTCTCTCT----CATCAGTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13249916 296 + 18905526 gtaatttttattttacaagtttgtgcaactcaattaatacagtaatta----ccaaaa-----taggtgcctgattagtatagatatctacatatcttaactatatatgcccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgt--ttcttctctttgggcatataCTACAAGAGAACAAAAGTAAATATACCTCTACTGC-------------CTCTCTCTCTCTCT----CATCAGTAAG---AGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60078237 295 - 72318688 gtaatttttattttacaagtttgtgcaactcaattaatacagtaatta----ccaaaa-----taggtgcctgattagtatagatatctacatatcttaactatatatgcccaaattatttgaaaatatttttaatattttctcacttaaaaacagatg-----catcacattttatat---tgt-----ttctctttgggcatataCTATAAGAGAATAAAAGTAAATATACCTCTACTGC-------------CTCTCTCTCTCTCT----CATCAGTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 415297 296 - 1517660 gtaatttttattttacaagtttgtgcaactcaattaatacagtaatta----tcaaaa-----taggtgcctgattagtatagatatctacatatcttaactatatatgcccaaattatttgaaaatatttttaatattttctcacttaaaatcagatg-----catcacattttatat---tgt--ttcttctctttgggcatataCTACAAGAGAATAAAAGTAAATATACTTCTACTGC-------------CTCTCTCTCTCTCT----CATCAGTAAG---AGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3511426 299 + 6513552 gtaatttttattttacaagtttgtgcaactcaattaatacagtaatta----ccaaaa-----taggtgcctgattagtatagatatctatgtatcttaactatatatgcccaaattatttgaaaatatttctaatattttctcacttaaaaatagatg-----catcacattttatat---tgt--tttttctctttgggcatataCTATAAGAGAATAAAAGTAAATATACCTCTGCTGC-------------CTCTCTCTCTCTCT----CATCAGTAAGACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTAT--AATTAATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105281202 274 + 117903854 gaa--atttttatcttccgtttgcgcaactcaattaataaactaaata----ctaaaa-----taggtacctgattagtatagctatct----------actatatatgcccaaattacctgaaaatattttaaatattttctcactttaaaacagatg-----catcacattttatat---tgg--ttttactatttgggcatataCTGTAGGAGAATG-----AAAGATA-CTCTGCTGC-------------------CTCTCTCT----CATCAGTAACAC---AATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTCTTCCATTAACTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19468920 282 - 31320352 gta--ttttattttcccagtttgtgcaactcaattaatatactaaata----ctaaaa-----taggtatctgattagtatagatatct----------actatatatgcccaaattacctgaaaatattttaagtattttctcacttaaaaacagatg-----catcacattttatat---tgg--tttt-cccttcgggcatataCTGTAGGAGAATGAAAGTAAAGATACCTCTGCTGC-------------------CTCTCTCT----CATCAGTAAAACAAGAATATTGGAGATGGTCACAAAGAGGAAAT-AATTACTGTTCCATTAAGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1664728 285 + 2203405 gtaatttttattttcccagtttgtgcaactcaattaatatactaaata----ctaaaa-----taggtatctgattagtatagatatct----------actatatatgcccaaattacctgaaaatattttaaatattttctcacttaaaaacagatg-----catcacattttatat---tgg--tttttctcttcgggcatataCTGTAGGAGAATGAAAGTAAAGATACCTCTGCTGC-------------------CTCTCTCT----CCTCAGTAAGACAAAAATATTAGAGATGCTCACAAAGAGGAAAT-AATTACTGTTCCATTAAGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3617281 284 - 14941987 gtaatttttattttcccagtttgtgcaactcaattaatatactaaata----ctaaga-----taggtatgtgattagtatagatatct----------actatatatgcccaaattacctgaaaatattttaaatattttctcactt-aaaacagatg-----catcacattttatat---tgg--tttttctcttcgggcatataCTGTAGGAGAATGAAAGTAAAGATACCTCTGCTGC-------------------CTCTCTCT----CATCAGTAAGACAAGAATATTGGAGAAGGTCACAAAGAGGAAGT-AATTACTGTTCCATTAACTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11242817 282 - 20685099 gtaactataaatttacagatttgtgaagctcaattaatatgttaaata----ctaagg-----t-gatgtctgattatt----ttgtctacGTAGCTTCACTGTGTATAGTCACATTAACTGAA---------AGTATTTTCTTACCAGAAAA---ACG-----CATCACATTACCCACGAGTGT--GCCTTCTCTTTCGGCACATTCAGTAACAGAATTGAAGGAAACTTA-CTGTGCTAC----------------CCTGCCCCCCA----AGCCAGTAAGACCAGAGAACTGGAGGTGATCACAAAGAGGAAATAAAGTATTAT--TATTAtttt i otoGar3.GL873546 I 4 I 242 s mm10.chr1 111853120 224 + 195471971 GCAATTGTGATTTTGTATGTTCTTGCACATCtat-aatatattaaatataatctgaaaatctttaagtattttatcaatagaaaaagtt----------attatatat------attatatgggtatattatatatat-------------------------------------atat---GGG--TTTGGCTTTTTGAACATA---------GCATCAGTTATAAACAGGACTTT----C-------------------CTTTCTTT------------------AGAGATTGTTGGTGATTACAAAGAGGATAT-ATTT--TTC--TATTAACTT i mm10.chr1 I 4 C 0 s canFam3.chr1 112322269 148 - 122678785 ataagtgtgattttat--gttcctttgactcaattgatatgttcaata----ctatGG-----T-------------------------------------------------------------------------------------AAAATAGAGG---------ATAATTTAAAT-------------------------------------ACTAAACTAAAATATA---------A--------------------------------------AAGACCGGAGAATTGTAGGTGATCACAAAGAGGAAAc-aagtactgttccatgatttt i canFam3.chr1 I 4 I 4 s dasNov3.JH575754 496191 300 - 2150887 ataattttgatcttat--gtttgtgcaactagattgacaaagtaatta----ttaaaa-----tagatgtttgattattcgattcattt----accttcactttatatgctcagattatctgaaagggtgt--agtatctttt--atgggaaaatggtgcatcccatcaccttatatat---gagctttcttcttattgggtatataCAATAAAAGAATCAAAATCAATCTATCTCTACTGTTCACGCGTTTTTCCTCTCTTCCTCTCTGTACCATCA-------------ATTAGAGATTGTCATACAAAGGAAAT-AACTACTAT--TATTAATTt i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=13731680.000000 s hg38.chr18_GL383571v1_alt 148701 1254 + 198278 ----ACATACTTTTTGAA----AATCCTTGCGCCAACTCTGAGGGAG----------tttactgatagaaaaatgaagatt-taaaattaagaaacttg---cataagacctcagaactagtagataccga-----ctaggggat-ttgtactta--------------tttctaatt---ccaaagatcatTATTAAAT---ATAAACTTGTTGTGT--CTATTA-CATTTTCAACGGCAATGTCCCCCTTCAAATTAAGGATGAAAATGGGGGAAAGGTAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGCTTGCACAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTATGTGTATACAAGCACGCATCTTTTTATTCATGTGTTCAAC---------AATAGGATATTTTAGATAG----TTTTATAATTACCGTTAGGAAACAGTCAAAGTAACAACTGGATATGTGT--ACATTTCAGTTTACTTCAGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATGTTGTGCTCCAGTTAGCACTGAACTAGCCAGGGTGCCCAGATTAATGTTTAAAAA-T-AACAGTAAAAACCTTC------TGTTTTGTTTATGTGGGGTTAACTTATAGTAGCTATATCCTTTGT---ATGAACTTATATTTTAATGTGTATCCCCTCAAAGCAATTTCATCATTTCTTGGTTGTAT-----TGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTAAAGCATCAAATTAAAATGGTCCA--TAAAGTTAA-ACTAACCATATTT----TAAAGTTGCAAGCAATGTAAACAAATCTAGAGAAAAAGTAATCTTTTGGAACAGAGTGAAGGA--------AT----GAACA---TATTAAAAC---AAAA----------------------AAAAATCAATAAAACTTGGCATTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTTGCATAGTGCAATGAACAAGGTAAAAATA---AACTTA------TTGTTCATCAAGGGGTGTCAGATTTTAATGCAAGGATTGAAAAGTTTATGTTTCTCATTTAGCA-AATGAGAGAAGTGCCAGTAA-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAGAAACAGAGCAAAACACAATATATGAGAGGACACTG-----GCTTATCTAGGACAGTTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG s panTro5.chr18 65058721 1265 + 78221452 ----ACATACTTTTTGAA----AATCCTTGCGCCAACTTTGAGGGAG----------tttactgatagaaaaatgaagatt-taaaattaagaaacttg---cataagacctcagaactagtagataccga-----ctaggggat-ttgtactta--------------tttctaatt---ccaaagatcatTATTAAAT---ATAAACTTGTTGTGT--CTATTA-CATTTTCAACGGTAATGTCCCCCTTCAAATTAAGGATGAAAATGGGGGAAAGGTAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGCTTGTACAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGCATGTATCTTTTTATTCATGTGTTCAAC---------AATAGGATATTTTAGATAG----TTTTATAATTACTGTTAGGAAACAGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGCGTACATAAGCCAACTGTAAGCATGTTGTGCTCCAGTTAGCACTGAACTAGCCAGGGTGCCCAGATTAATGTTTAAAAA-T-AACAGTAAAGACCTTC------TGTTTTGTTTATGTGGGGTTAACTTGTAGTAGCTATATCCTTTGT---ATGAACTTATATTTTAATGTGTATCCCCTCAAAGCAATTTCATCATTTCTTGGTTGTAC---TGTGTTTTTATACGT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTAAAGCATCAAATTAAAATGGTCCA--TAAAGTTAA-AATAACCATATTT----TAAAGTTGCAAGCAATGTAAACAAATCTAGAGAAAAAGTAATCTTTTGGAACAGAGTGAAGGA--------AT----GAACACATCATTaaaac---aaaa-aa---------------aaacaaaaatcaataaaaCTTGGCATTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTTGCATCGTGCAATGAACAAAGTAAAAATA---AACTTA------TTGTTCATCAAGGGGTGTCAGATTTTAATGCAAGGATTGAAAAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGCCAGTAA-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAGAATAA---------------------------TCTATG--TATCCCGAG-GTCAGAAACAGAGCAAAACACAATATATGAGAGGACACTG-----GCTTATCTAGGACATTTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64177789 1266 + 77229886 ----ACATACTTTTTGAA----AATCCTTGCGCCAACTTTGAGGGAG----------tttactgatagaaaaatgaagatt-taaaattaagaaatttg---cataagacctcagaactagtagataccga-----ctaggggat-ttgtactta--------------tttctaatt---ccaaagatcatTATTAAAT---ATAAACTTGTTGTGT--CTATTA-CATTTTCAACGGTAATGTCCCCCTTCAAATTAAGGATGAAAATGGGGGAAAGGTAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGCTTGTACAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGCATGTATCTTTTTATTCATGTGTTCAAC---------AATAGGATATTTTAGATAG----TTTTATAATTACTGTTAGGAAACAGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATGTTGTGCTCCAGTTAGCACTGAACTAGCCAGGGTGCCCAGATTAATGTTTAAAAA-T-AACAGTAAAGACCTTC------TGTTTTGTTTATGTGGGGTTAACTTGTAGTAGCTATATCCTTTGT---ATGAACTTATATTTTAATGTGTATCCCCTCAAAGCAATTTCATCATTTCTTGGTTGTAC---TGTGTTTTTATACGT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTAAAGCATCAAATTAAAATGGTCCA--TAAAGTTAA-AATAACCATATTT----TAAAGTTGCAAGCAATGTAAACAAATCTAGAGAAAAAGTAATCTTTTGGAACAGAGTGAAGGA--------AT----GAACATATCATTaaaac---aaaaaaa---------------aaacaaaaatcaataaaaCTTGGCATTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTTGCATCGTGCAATGAACAAAGTAAAAATA---AACTTA------TTGTTCATCAAGGGGTGTCAGATTTTAATGCAAGGATTGAAAAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGCCAGTAA-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAGAATAA---------------------------TCTATG--TATCCCGAG-GTCAGAAACAGAGCAAAACACAATATATGAGAGGACACTG-----GCTTATCTAGGACATTTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5397275 1255 + 17472758 ----ACATACTTTTTGAA----AATCCTTGCGCCAACTTTGAGGGAG----------TTTACTGATAGAAAAATGAAGATT-TAAAATTAAGAAACTTG---CATAAGACCTCAGAAATAGTAGATA-CGA-----CTAGGGGAT-TTGTACTTA--------------TTTCTAATT---CCAAAAATCATTATTAAAT---ATAAACTTGTTGTGT--CTATTA-CATTTTCAACGGTAATGTCCCCCTTCAAATTAAGGATGAAAATGGGGGAAAGGTAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGCTTGCACAG-AGAAAACCTC--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGCATGTATATTTTTATTCATGTGTTCAAC---------AATAGGATATTTTAGATAG----TTTTATAATTACTGTTAGGAAACAGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCAGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTA-ATAAGCCAACTGTAAGCATGTTGTGCTCCAGTTAGCACTGAACTAGCCAGGGTGCCCAGATTAATGTTTAAAAA-T-AATAGTAAAAACCTTC------TGTTTTGTTTATGTGGGGTTAACTTGTAGTAGCTATATCCTTTGT---ATGAACTTATATTTTAATGTGTATCCCCTCAAAGCAATTTCATCATTTCTTGGTTGTAT---TGTG-TTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTAAAGCATCAAATTAAAATGGTCCA--TAAAGTTAA-AATAACCATATTT----TAAAGTTGCAAGCAATGTAAACAAATCTAGAGAAAAAGTAATCTTTTGGAACAGAGTGAAGGA--------AT----GAACGTATCATTAAAAC---AAAA-----------------------AAAATCAATAAAACTTGGCATTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTTGCATCGTGCAATGAACAAGATAAAAATA---AACTTA------TTGTTCATCAAGGGGTGTCAGATTTTAATGCAAGGATTGAAAAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAATGCCAGTAA-CAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAGAAACAGAGCAAAACACAATATATGAGAGGACACTG-----GCTTATCTAGGACATTTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139437740 1277 - 152096393 ----ACATACTTTTTGAA----AATCCTTGCGCCAACTTTGAGGGAG----------TTTACTGATAGAAAAATGAAGATT-TAACATTAAGAAACTTG---CATAAGACCTCAGAATTAGTAGATACTGA-----CTAGGGGAT-TTGTTCTTA--------------TTTCTAATT---CCAAAGATCATTATTAAAT---ATAAACTTGTTGTGT--CTATTA-CATTTTCAATGGTAATGTCCCCCTTCAAATTAAGGATGGAAATGGGGGAAAGGTAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGCTTGTACAG-AGAAAACCTT--ATGCCTCTTAAGGTAACAAAATTTTA---AGTT--TGTGTGTGTGTATACAAGCATGTATCTTTTTATTCATGTGTTCAAC---------AATAGGATATTT----TAG----TTTTATAATTACTGTTAGGAAAAAGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATGTTGTGCTCCAGTTAGCATTGAATTAGCCAGGGTGCTCAGATTAATGTTTAAAAA-T-AACAGTAAAAACCTTC------TGTTTTGTTTATGTGGGGTTAACTTTTATTAGCTATATCCTTTGT---ATGAACTTATATTTTAATGTGTGTCCCCTCAAAGCAATTTCATCACTTCTTGGTTGTAC---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTAAAGCATCACATTAAAATGGTCCA--CAAAGTTAA-AATAACCATATTT----TAAAGTTGCAAGCAATGTAAACAAATCCAGAGAAAAAGTAATCTTTTGGAACAGAGTGAAGGA--------AT----GAACATATCATTAaaac---aaacaaacaaaaaacaaacaacaaacaaaAATCAATAAAACTTGGCATTAATATTT--CAGTA--TAGTACA---AGGGTTTGG-AACATTATTTGCATCATGCAATGAACAAGGTAAAAATA---AACTTA------TTGTTCATTGAGGGGTGTCAGATTTTAATGCAAGGATTGAAAAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAA-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAGAATAA---------------------------TGTATG--TATCCTGAG-GTCAGACATAGAGCAAAACACAATATATGAGAGGACACTG-----GCTTATCTAGGACATTTGAAAACCTCAGACAT-TAGGTGAAATTCAACACCAGTGT----TAATACAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57387792 1261 + 70235451 ----ACATACTTTTTGAA----AATTCTTGCTTCAACTTTGAGGGAG----------TTTACTGCTAGAAAAATGAAGATT-TAAAATTAAAAAACATG---CCTAACACCTCAGAGTTAG----------------TAGGGTAT-TTGTACTTA--------------TTTCTAATT---CCAAAGATCA-CATTAAAT---ATAAAC---TTGTAT--ATATTA-CATTTTCAATGGTAATGTCCCCCTTCCAATT-AGGATGGAAATGGGGGAAAGATAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGATTGTAAAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------AACAGGATATTTTAGATGG----TTTTATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATATTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAAACTAATGCTTAAAAA---AACAGTAAAAACTTTA------CATTTTGCTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATTTCCTCAAAGCAATTCCATCATTTCTTGGTTGTAT---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAATCTAATCTTTTGGAACAGAGTGCAGGA--------AT----GAACACACCATTAaaac----aacaaacaaacaaaaaacaacaaacaaaaatcaataaaacTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTCACATCATGCAATGAACAAGGTAAAAAT-----ACTTA------TTGTTCATTGAGGGGTGTCAGATTTTAATGCAAGGATTGAATAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAA-TAGGGGCCAAACT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TTTTTAAACTGTAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAAAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GCTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63079198 1265 - 75711847 ----ACATACTTTTTGAA----AATTCTTGCTTCAACTTTGAGGGAG----------TTTACTGCTAGAAAAATGAAGATT-TAAAATTAAAAAACATG---CCTAACACCTCAGAGTTAG----------------TAGGGTAT-TTGTACTTA--------------TTTCTAATT---CCAAAGATCA-CATTAAAT---ATAAAC---TTGTAT--ATATTA-CATTTTCAATGGTAATGTCCCCCTTCAAATT-AGGATGGAAATGGGGGAAAGATAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGATTGTAAAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------AACAGGATATTTTAGATGG----TTTCATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATATTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAAACTAATGCTTAAAAA---AACAGTAAAAACTTTA------CATTTTGTTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATTTCCTCAAAGCAATTTCATCATTTCTTGGTTGTAT---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAACCTAATCTTTTGGAACAGAGTGCAGGA--------AT----GAACATACCATTAaaacaacaaacaaacaaacaaaaaacaacaaacaaaaatcaataaaacTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTCACATCATGCAATGAACAAGGTAAAAAT-----ACTTA------TTGTTCATTGAGGGGTGTCAGATTTTAATGCAAGGATTGAATAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAA-TAGGGGCCAAACT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TTTTTAAACTGTAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAAAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GCTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13638394 1265 - 18804593 ----ACATACTTTTTGAA----AATTCTTGCTTCAACTTTGAGGGAG----------TTTACTGCTAGAAAAATGAAGATT-TAAAATTAAAAAACATG---CCTAACACCTCAGAGTTAG----------------TAGGGTAT-TTGTACTTA--------------TTTCTAATT---CCAAAGATCA-CATTAAAT---ATAAAC---TTGTAT--ATATTA-CATTTTCAATGGTAATGTCCCCCTTCAAATT-AGGATGGAAATGGGGGAAAGATAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGATTGTAAAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------AACAGGATATTTTAGATGG----TTTCATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATATTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAAACTAATGCTTAAAAA---AACAGTAAAAACTTTA------CATTTTGTTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATTTCCTCAAAGCAATTTCATCATTTCTTGGTTGTAT---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAACCTAATCTTTTGGAACAGAGTGCAGGA--------AT----GAACATACCATTaaaacaacaaacaaacaaacaaaaaacaaaaaacaaaaatcaataaaacTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTCACATCATGCAATGAACAAGGTAAAAAT-----ACTTA------TTGTTCATTGAGGGGTGTCAGATTTTAATGCAAGGATTGAATAGTTTATATTTCTCATTTAGCA-AATGAAAAAAGTGACAGTAA-TAGGGGCCAAACT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TTTTTAAACTGTAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAAAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GCTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13250212 1266 + 18905526 ----ACATACTTTTTGAA----AATTCTTGCTTCAACTTTGAGGGAG----------TTTACTGCTAGAAAAATGAAGATT-TAAAATTTAAAAACATG---CCTAAGACCTCAGAGCTAG----------------TAGGGTAT-TTGTACTTA--------------TTTCTAATT---CCAAAGATCA-TATTAAAT---ATAAAC---TTGTAT--GTATTA-CATTTTCAATGGTAATGTCCCCCTTCAAATT-AGGATAGAAATGGGAGAAAGTTAAAAACAAAGCTTGTGAAAAACCTACCAGT--ACAACCTGCTGGTTGTAAAG-AGAAAACCTT--ATGCTTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------AACAGGATATTTTAGATGG----TTTTATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATATTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAGATTAATGCTTAAAAA---GACAGTAAAAACTTTA------CGTTTTGTTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATTTCCTCAAAGCAATTTCATCATTTCTTGGTTGTAT---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAACCTAATCTTTTGGAACAGAGTGCAGGA--------AT----GAACATACCATTaaaacaacaaacaaacaaacaaaaaacaacaaacaaaaatcaataaaacTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTCACATCATGCAATGAACAAGGTAAAAAT-----ACTTA------TTGTTCATTGAGGAGTGTCAGATTTTAATGCAAGGATTGAATAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAA-TAGGGGCCAAACT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCCTTAAAG-ATGTTGCATGACCATGAATA--TTTCCCTTTTTTAAACTGTAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAGAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GCTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60078532 1258 - 72318688 -------TACTTTTTGAA----AACTCTTGCTTCAACTTTGAGGGAG----------tttactgctagaaaaatgaagatt-taaaattaagaaacttg---cctaagacctcagagctag----------------tagggtat-ttgtactta--------------cttctaatt---ccaaagatcg-tattAAAT---ATAAAC---TTGTAT--ATATTA-CATTTTCAATGGTAATGTCCCCCTTCAAATT-AGGATGGAAATGGGGGAAAGATAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGGTTGTAAAG-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTCTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------AACAGGATATTTTAGATGG----TTTTATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATATTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAGATTAATGCTTAAAAA---AACAGTAAAAACTTTA------CGTTTTGTTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATTTCCTCAAAGCAGTTTCATCATTTCTTGGTTGTAT---TTTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGAGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAACCTAATCTTTTGGAACAGAGTGCAGGA--------AT----Gaacataccattaaaac----aacaaacaaacaaaaaacaacaaacaaaaatcaataaaacTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCACTATTCGCATCATGCAATGAACAAGGTAAAAAT-----ACTTA------TTGTTCATTGAGGGGTGTCAGATTTTAATGCAAGGATTGAATAGTTTATGTTTCTCATTTAGCA-AATAAGAAAAGTGACAGTAA-TAGGGGCCAAACT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TTTTTAAACTGTAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAGAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GCTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 415593 1262 - 1517660 ----ACATACTTTTTGAA----AATTCTTGCTTCAACTTTGAGGGAG----------TTTACTGCTAGAATAATGAAGATT-TAAAATTTAAAAACATG---CCTAAGACCTCAGAGCTAG----------------TAGGGTAT-TTGTACTTA--------------TTTCTAATT---CCAAAGATCA-TATTAAAT---ATAAAC---TTGTAT--ATATTA-CATTTTCAATGGTAATGTCCCCCTTCAAATT-AGGATAGAAATGGGGGAAAGTTAAAAACAAAGCTTGTGAAAAACCTACCAGT--ACAACCTGCTGGTTGTAAAG-AGAAAACCTT--ATGCTTCTTAAGGTAATGAAATTTTA---AGTT--TGTGTGTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------AACAGGATATTTTAGATGG----TTTTATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATATTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAGATTAATGCTTAAAAA---GACAGTAAAAACTTTA------CATTTTGTTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATTTCCTCAAAGCAATTTCATCATTTCTTGGTTGTAT---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAACCTAATCTTTTGGAACAGAGTGCAGGA--------AT----GAACATACCATTAaaac---aaacaaacaaacaaaaaacaacaaacaaaaatcaataaaacTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTCACATCATGCAATGAACAAGGTAAAAAT-----ACTTA------TTGTTCATTGAGGGGTGTCAGATTTTAATGCAAGGATTGAATAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAA-TAGGGGCCAAACT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TTTTTAAACTGTAAAGAATAA---------------------------TGTATG--TATCCCAAG-GTCAGAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GCTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3511725 1268 + 6513552 ----ACATACTTTTTGAA----AATCCTTGCTTCAACTTTGAGAGAG----------TTTACTGCTAGAAAAATGAAGATT-TAAAATTAAGAAACTTG---CATAAGACCTCAGAGCTTG----------------CAGGGGAT-TTGTACTTA--------------TTTCTAATT---CCAAAGATCA-TATTAAAT---ATAAAC---TTGTGT--ATATTA-CATTTTCAATGGTAATGTGCCCCTCCAAATT-AGGATGGAAATGGGGGAAAGATAAAAACAAAGCTTGTGAAAAACCCACCAGT--ACAACCTGCTGGTTGTACAA-AGAAAACCTT--ATGCCTCTTAAGGTAATGAAATTTTA---AGTTTGTGTGTGTGTGTATACAAGTATGTATCTTTTTATTCATGTGTTCAAC---------GACAGGATATTTTAGATGG----TTTTATAATTACTGTTAGGAAAAGGTCAAAATAACAACTGGATATGTGT--ACATTTCAGTTTACTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGTAAGCATGTTATGCTCCAGTTAGCATTGAACTAGCCAGGGTGCTCAGATTAATGCTTAAAAA---AATGGTAAAAACTTTA------TGTTTTGTTGATGTGGGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTCATATTTTAATGAGTATTTCCTCAAAGCAATTTCATCATTTCTTGGTT-TAT---TGTGTTTTTATACAT----ATAAATCT-CCCTTCAATGTTAAGTGAAATATTGCATTGAAGCATCAAATTTAAATGGTTCA--TAAAGTTAA-AATAACCATATTT----TAAAGCTGCAAGCAATGTAAACAAATCTAGAGAAAACCTAATCTTTTGGAAAAGAGCGCAGGA--------AT----GAATATACCATTAAAACACCAAACAAACAAACAAAAAACAACAAACAAAAATCAATAAAACTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTCGCATCATGTAACAAACAAGGTAAAAATA---AACTTC------TTGTTCATTGAGGGGTGTCAGATTTTAACGCAAAGATTGAATAGTTTATGTTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAA-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCATGACCATGAATA--TTTCCC-TTTTTAAACCGTAAAGAATAA---------------------------TGTATG--TATCCCGAG-GTCAGAAATAGAGCAGAACACAATATATTAGAGGACACTG-----GTTTATCTAGGACATCTGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATACAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105281476 1258 + 117903854 ----ATATACTTTTGGAA----AATCCTTGTGTCAACTTTGCAGGAA----------TTTACTGATAGAAAAATAAAGATT-TAAAATTAAGAATCTTG---CATAAGACCTCAGAGCTAGTAGATACTAA-----CTGGGGGAT-TTACACTTA--------------TTTGTAATT---CCAAAGATCA-GATAAAATATAATAAACTTCTTGTGT--ATATAA-CATTTTCAATGGTAATGTCCCCCTTCAAATTAAGGAAGGAAATAGAGGAAAGGTAAAAACAAGGCTTGTGAAAAACCCACCAGT--ACAACCTGATGGTTGTACAG-AGAAAACCTT--GT--CCCTTAAGGTAATGAAATTT-----------TGTGTGTGTGCATACAAGCATGTATCTTTTTATTCATGTGTTCCACAATATCCACAATAGGGTATTTTAGATAG----TTTTATAGTTATTGTTGGGAAAAAGTCAAAATAGCAATGGCACGTGTGT--ACATTTCAGTTTATTTCAATAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGAAAGTGTTTTGTCCTCCAGTTAGCACTGAACTAGCCACGGTGCTCAGGTTA--GTTTAAAAA-T-AAGAGTAAAAACCT--------TGTGTTGTTTATGTGTGGTTAACTTTTATTAGCCGTATCCTATAT---AGGAACTTATATTTTAATGAGTATCTCATCAAAACAATTTCATCATTTCTTGGTTGTAC---TGTGTTTTTATATGT----ATAAATCT-CCCTTCAACTTTAAGTGAAATATTGCATTGAAGCATCGAATTAAATTGCTTCAATTAAAGTTAA-AATAGCCATA-TT----TAAAGTTGAAAGCAATGTAAACAAACATACAGAAAAAGTAATCTTTTGGAACAAAGTGAAG----GAATAAAT----GAATATACCTTTAAAAC----------------------AACGAAAAAAAATTAATAAAACTTGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGGAAGCATTATTTGCATCATGCAATGGATAAAGTAAAAAT-----A------------GATTATTGAAGGGTGTCAGACTTTAATGCAAGATTTGAAGAGTTTATAGTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAG-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAGG-ATGTTTCATGACCATGAATA--TTTCCC-TCTTCAAACCATAAAGAATAA---------------------------TGTATG--TATCTCAGG-GTCAGAAATAGAGAAAAACACAACATATGAGACACCACT------GCTTACCTAGGACACTAGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATGCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19469202 1194 - 31320352 ----ACATACTTTTGGAA----AATCCTTGTGTCAACTTTGCAGGAA----------tttactgatagaaaaatgaagatt-taaaattaagaatcttg---cataagacctcagagctagtagatactaa-----ctgggggat-ttacactta--------------tttgtaatt---ccaaagATCA-GATAAAAT---ATAAACTTCTTGTGT--ACACAA-CATTTTCAATGGTAATGTCTCCCTTCAAATTAAGGATGGAAATAGAGGAAAGGTAAAAACAAGGCTTGTGAAAAACTCACCAGT--ATAACCTGATGGTTGTACAG-AGAAAACCTT--GT--CTCTTAAGGTAATAAAATTT-----------TGTGTGTGTGCATACAAGCATGTATCTTTTTA--------------------------------------ATAG----TTTTATAGTTATTGTTGGG-AAAAGTCAAAATAACAATGGCA-----GT--ACATTTCAGTTTATTTCGGTAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGAAAGTGTGTTGTGCTCCAGTTAGCACTGAACTAGCCAGGGTGCTCAGGTTA--GTTTAAAAA-T-AATAGTAAAAACCT--------TGTTTTGTTTATATGTGGTCAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATCTCATCAAAACGATTTCATCATTTCTTGGTGGTAC---TGTGTTTTTCTATGT----ATAAATCT-CCCTTCAATTTTACGTGAAATATTGCATTGAAGTATCAAATTAAATTGGTCCAA-TAAAGTTCA-AATACCCATATTT----TAAAGTTGAAAGCCATGTAAACAAACCTATAGAAAAAGTAATCTTTTGGAACAAAGTGAAGGAATGAATAAAT----GAACATACCATTAAAAC----------------------AACGAACAAAAATTAATAAAACTTGGCAGTAATTTTT--CCGTA--TAGTACA---AGAATTTGG-AGCGTTATTTGCATCATGCAATGGATAAAGTAAAAAT-----A------------GTTTATTGAGGGGTATCAGATTTTAATAAAAGATTTGATGAGTTTATAGTTCTCATTTAGCA-AATGAGAAAAGTGACAGTAG-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAAG-ATGTTGCG-GACCATGAATA--TTTCCG-CCTTTAAACCATAAAGAATAA---------------------------TGTATGTATATCCCACA-GTCAGAAATAGAGAA---------------------ATT------GCTTACCTAGGACACTAGATAACCTGAGACAT-TAGGTGAAATTCAGTATCAGTGT----TAATGCAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1665013 1249 + 2203405 ----ACAAACTTTTGGAA----AATCCTTGTGTCAACTTTGCAGGAA----------TTTACTGATAGAAAAATGAAGATT-TAAAATTAAGAATCTTG---CATAAGACATCAGAGCTAGTAGATACTAA-----CTGGGGGAT-TTACACTTA--------------TTTGTGATT---CCAAAGATCA-GATAAAAT---ATAAACTTCTTGTGT--ATATAA-CATTTTCAATGGTAATGTCTCCCTTCAAATTAAGGATGGAAATAGAGGAAAGGTAAAAACAAGGCTTGTGAAAAACTCACCAGT--ACAACCTGACAGTTGTACAG-AGAAAACTTT--CT--CTCTTAAGGTAATGAAATTT-----------TGTGTGTGTGCATACAAGCATGTATCTTTTTATTCATGTGTTCCACA--------AATAGGGTATTTTAGATAG----TTTTATAGTTATTGTTGGG-AAAAGTCAAAATAACAATGGCACATGTGT--ACATTTCAGTTTATTTCGGTAAATCTAGAGAG--AGAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGAAAGTGTGTTGTGCTCCAGTTAGCACTGAACTAGCCAGGGTGCTCAGGTTA--GTTTAAAAA-T-AATAGTAAAAACCT--------TGTTTTGTTTATGTGTGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATAAGTATTTCATCAAAACAATTTGATCATTTCTTGGTTGTAC---TGTGATTTTATATGT----ATAAATCT-CCCTTCAATTTTAAGTGAAATATTGCATTGAAGCATCAAATTAAATTGGTCCAA-TAAAGTTAA-AATAGCCATATTT----TAAAGTTGAAAGCCATGTAAACAAACCTACAGAAAAAGTAATCTTTTGGAACAAAGTGAAGGAATGAATAAAT----TAACATACCATTAAAAC----------------------AACAAACAAAAATTAATAAAACTAGGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTCGG-AGCATTATTTGCATCATGCAATGGATAAAGTAAAAAT-----A------------GTTTATTGAGGGGTGTCAGATTTTAATGCAAGATTTGATGAGTTTATAGTTCTCATTCAGCA-AATGAGAAAAGTGACAGTAG-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAATGAGCATTAAGG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAGAATAA---------------------------TGTATG--TATCCCACA-GTCAGAAATAGAGAAAAACACAACATATGAGAGACCACT------GCTTACCTAGGACACTAGATAACCTGAGACAT-TAGGTGAAATTCAGTATCAGTGT----TAATGCAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3617565 1251 - 14941987 ----ACATACTTTTTGAA----AATCCTTGTGTCAACTTTGCAGGAA----------tttactgatagaaaaatgaagatt-taaaattaagaatcttg---cataagacctcagagctagtagatactaa-----ctgggggat-ttacactta--------------tttgtaatt---ccaaagATCA-GATAAAAT---ATAAACTTCTTGTGT--ATATAA-CATTTTCAATGGTAATGTCCCCCTTCAAATTAAGGATAGAAATAGAGGAAAGGTAAAAACGAGGCTTGTGAAAAACCCACCAGT--ACAACCTGATGGTGGAACAG-AGAAAACCTT--GT--CTCTCAATGCAATGAAATTT-----------TGTGTATGGGTATACAAGCATGTATCTTTTTATTCATGTGTTCCAC---------AACAGGGTATTTTAAATAG----TTTTATAGTTATTGTTGGGAAAAAGTCAAAATAACAATGGCACATGTGT--ACATTTCAGTTTATTTCGGCAAATCTAGAGAG--ATAATCAGAA-GTTAGTTGGTGTACATAAGCCAACTGAAAGTGTGTTGTGCTCCAGTTAGCACTGAACTAGCCAGAGTGCTCAGGTTA--GTTTAAAAA-T-AATAGTAAAAACCTTC------TGTTTCGTTTATGTGTGGTTAACTTTTATTAGCTATATCCTTTAT---ATGAACTTATATTTTAATGAGTATCTCATCAAAACAATTTCATAATTTCTTGGTTGTAC---TGTGTTTTTATATGT----ATAAATCT-CCCTTCGATTTTAAGTGAAATATTGCATTGAAGCATTAAATTAAATTGGTCCAA-TAAAGTTAA-AATAGCCATATTT----TAAAGTTGAAAGTAATGTAAACAAACCTACAGAAAAAGTAATCTTTTGGAACAAAGTGAAGGAATGAATATAT----GAACATACCATTAAAAC----------------------AACAAACAAAAATTAATAAAACTTAGCAGTAATTTTT--CAGTA--TAGTACA---AGGGTTTGG-AGCATTATTTGCATCATGCAATGGATAAAGTAAAAAT-----A------------GTTTATTGAGGGGTGTCAGATTTTAATGCAAGATTTGAAGAGTTTATAATTCTCATTTAGCA-AATGAGAAAAGTGACAGTTG-TAGGAGCCAAATT-GAC-TTCCAAAAAGAGAAA----------CAAGGAGCATTAAGG-ATGTTGCATGACCATGAATA--TTTCCC-TCTTTAAACCATAAAAAATAA---------------------------TGTATG--TATCCCACG-GTCAGAAATAGAGAAAAACGCAACATATGAGAGACCACT------GCTTACCTAGGACACTAGAAAACCTGAGACAT-TAGGTGAAATTCAACATCAGTGT----TAATGCAC i aotNan1.NW_018502140v1 C 0 I 142 s otoGar3.GL873546 11243341 1268 - 20685099 ----acatttatttttacacttaatccttgcatcaactttgaggaag----------atttgt-atagaagagtggagatc-taaaattaagaaact-------taaggtctcagagctggcagataatga----cccagggtat-ttgcactca--------------tttctaatt---ccaaagctca---tTTAAT---AAAAACTTGTTAAAT--ATGTAA-TATATTTAATGGAAATGTCTCCTTTCAAATTAAGGAAGGAAATGGGGGAAGGGTAAAACTAAGACGTGTGAAAAACCCACCAGT--AAAACCCGT---TCATACAG-AGAAAAGCTCAAATATCGCTTAAAGTACTGGAATTTTGT-CAAAT--TTTATAGGCATATACAAACCCTTATCTTTCTATTCAAGTGTTCACC---------AATGGAATATTTTAGATAA----TTTTATACTTATTTTTGAGAAAAAGGGAAAGCAACAGCTGCATGTGTGT--CCATCTCAGTTTAATTTGATAAATCTAGAGAGAAATAACCACAA-GTTAGTTGGTGCACAGAAGTCAGCTGTAAGCATGTGGTGCTCTAGTTAGCACTGAATTAGCCAGGGTGCTCAGGCTGATGCTTAAAAT-G-AACAT--AAAATCATC------TATTTTGCTGGCACGGTGTTAACTTTGATTAGTTTTTTCTTTTTTTTAATGCACCTGTCTTATAAACAGTATCTAATGAAAGCAATTTCATCATTTCTTGGTTGTAT-CATTTATTTTTATACATAGAAATAAATCT-CCCTCCAGTGTTTTATGAAATACTGCATTAAGGCATCAAATTAAAATGGTTCAA-TAAAGTTAA-AATAGCTATATTT----TAAA--CACAAGTAATTTGAACAAATCAACAGCAAATTTAATCTTTTGGGATGGAGTAAAGGaataaataaat----gaatgtataacttaaaa----------------------aataaataaataCCCATAAAAATGAGCAGTAATTCTTTGCAATAGGTAGTA-A---AGGGTTGGG-ATCATCATTTG---------ATGAATAAGATAAGCAGA---GTCTTAGCACTCTTGTTTGTAGAGGGATGCCAGATTTTCATGCAGCAATGGGAACGTTTATATTGCTCTTTTAGT-----------AGTGACACTGA-GAGCTGTGTAATTGGAT-TTCCAGAATGAGCAG----------C----AGCACCGACA-ATACCGCACATGCACAAATG--CTTCCC-TCCCTAAACCACTGAGAACAA---------------------------CGCATG--GACCCCAAG-GTCAGAAGCAGAGAGTCGCAC-GCCTGTGGGAGAAGGCTGCAGGTGCACGTCTAGGACATTTGAAAACCTGAGACACGTAGGTGAAATCCAAGTTCAGTGT----TAAGACAC i otoGar3.GL873546 I 242 C 0 s mm10.chr1 111853344 1100 + 195471971 ----TCACACTTTC--------AATTATATTCCCA---------------------------------------------T-TGATTTTAAGGAACTTA--------------AGAGCTGGAAAACTTTGA-----CCAGATTAC-TTGT--------------------------------------------TTAAGT---AAA------TTGTGT--GAATGA-TGTTT--AATGAAAATTTCCTTCTTCAAATTAAAAAGGACAA---AATAAATAATAAAACAAGGCTAGTGAAAA---------T--TTACTCTGCCAGTAATCTAGAAAAAAATCTT--ACACCTCT-AATTTAATGAAGTTTGGTGAAGTT--TGTA-ATCTGTACACAAACATATTTGTTTCTAT---GGTGTTCAAC---------AGTGAGACATTTTAAATTG----CCATACATCTGTTTT----GAATAGCAAAAGAAAGAACTGCAAATGTGTGCACATTTCAAAGTGATTTGGTAA--------------------------------TGCACTTACGCAAAT-----ATCTGTTGCACTCTAGATACCAATAAATTTGGCAGGATACTCAAGTTCATGACTAAAATTT-AACAGCAAAAA-----------TAACTTTCTTATGTG-----AAACTTTATTATCTATACattttat-----------atattttaatgaaaatattataaatGCAATTTCA-CAGTTTTTGGCTGAATTCATTTTTTCTTATATAT--AAATAAATCA-TCCATGCAAGTTTTGTGATGTAGTATGTCAAAGAATCAAATCAAAATAGTTCAA-CTAAGTCAATAACAGCAGTACTT--TATAAAATTCCACAAAACTTCAAAAGTTTTACAACAAAATCTATCTCTTGAATCAAAATGGAGTA--------ATGAGAGAATATATAATTAAGAA------------------------------AAAACATAAAAAATATCACAGTAATCTTT--CAATA--TAGTGAAAT-AAGGATTAA-AGGATTCTTTGTACTATGTCATGCTTAGTGCAGCATC-----TCTTA-----------CAT--AGGGATTACAGACTTTAATACAAATAATAGAATGTGTATGGGTCT--TTTGATA-GAGTAGAA-AGTCACAGTTT-TGTAAGCTGAACT-GGCTTTCCACTGTGGGAAA---------------AGTATTAAGGCATATCAAGTGTGCATGAGTATTTTTTTC-TCCTCAAAAAATGAAATAAAA---------------------------GGTATA--AAGCCTAAGTATTAAAAAGGGAGAA----ATAAAACATTTACATTTACT------GCATATCTAGAAAATATAAAATCTTGAGACAA-TAGTCGAAATTTAACATCACAAT----TAACATTC i mm10.chr1 C 0 C 0 s canFam3.chr1 112322421 1274 - 122678785 ----atgtggttttattt----aatccatgcatcgactctagggaag----------ttttacagaggggtaatggagact-taaaattaggaaagttg---ccccaaacctcacagctggtcagtacttactgacctagggtttgttgtattcaggtttttttttttttttctaatt---tcaaagctca-tATAATAT---ATAAAAGTGTTATATAAATGTAA-CATTTT-AACAGAAATGGCCTCCTTCAAATTAAGCAAGGAAATGGGGGGAAGGTACAAACA--GCCTGTGGAAGACCCCCAGGA--GTTGTCTGCTAGTTATTCAG-AGAAGACCGT--AGGCCTCCTATGGTAATGCAACTCTGCCAAGTG--GGCACGTGTGTGCACAAGCAGGTACCTTTCTACTCATGTGTTCCAC---------AATGGCATTTTTTTGATAG----TTTTATAATTAGTGGTGGGTAGAAGACAAA-------TTGAATGTGTGT--GCAATTCAGTTTATTTTAGTAAATCTGGAGAA--GTAACCACAA-GTTTGTTGGTGCTCAAAAACCCACTGTAAGCATGCTGTGCACT-GTTAGCATTGAAATAGCCACAGAGCTCAGGTTAATGTCTGATAA-TGAAAAGTAAAAACAC--------------------------CTGACTTTTATTAACTGCATTCTTTAT---ATTCACTTATCTTTGTATAGGTATCTTACGAAAGCAATTTCATCACTTGTTGGTCATAT---TGTGTTCTTTTACACATGAATAAATCTCCCCTTCAAAGTTTTGTGAAATATGACATT-AAGCATCAGATTAAAAAGGCGTAA-TATAGTTAA-AATAGCCATATTT----TAAAATCTCATGTACTTTAAACCAATCTACAATAAAATTAATCTTTTGGAGCAaagtgaagga----ataaat----gaatacataattaaaat----------------------aataaataaataCCAGAAAAAATGGGCAATATTCTTT--CACTG--TAGTACAATAAGGGTTTAG-AGCATGATTTGCATCATGCAATAAGTAAGAAGTGTGT----TATGCA------TTGTGTACAGAGGGGTGCCAGATTTTAATGCAGGGATTGAAGAGTTTCTAGTGCTCACATCCTA-AGTGAGGCAAGTGACAGTGGCTGGGAGCTCAATC-CGT-TTCCGAAAAGAAAAAATAATATGAATGAAGAGCAGCGCAG-GTGATCCATGTGTGTGAAAG--TTTGCT-TCCTTAAACCATTAAGAACAA---------------------------TGTGTA--TATCCCAAA-G--------AGAGAGGAAGATGACATAAGGTAAAACATC------ACATATCTCTGACATTTGAAAACCTGAAACATATAAGTAAAATTCAACATCAGTGTTAGCTAATATAC i canFam3.chr1 I 4 C 0 s dasNov3.JH575754 496491 1269 - 2150887 tcacaggtcattttattt----tatccttgcatcaactctgaaggagtttggggagttttacaggtgggaacatggagactgcataaataagacatttgctgcctaaaaccctatggttggtagatacaga------atggtaaa-ctgtattca--------------gctctgtttaactcaaagctca---tttctt---ACAAAACTGTTGTGA--ACATGATCTTTTTCAATGGAAACATCCCCCATCAAAATAAGCAAGAAAATGGGGGAAAGGTACAAACAAGGTTTGTGAAATATCCAACAGTACACAGTCTGTTCATTATAGAG-TGAAAACTGA--GT--CTCTTACTGCAGTGGAATTTTG----CCA--AGTGTTTGTGTATACAAGCACGTGTCTTTTC-TACATGTGTCCAAG---------GA-AAGCTAACCCAGAAAGACTAATTTATAGTTAATGTTGAAGAAAAGAGAAATGATTCA------ATGTTT--ATATTTTAGTTT-TTTTGGTAATTCTAGACCA--AAAAAAAGCATGTTTGTTGGTGCACATAAAGCAACTG------TTCTGTGCTGTAGTTAGTATCAAATCAGTCAGCGTGCTCATGTTATTATTTGAACA-TGAACAAGAAAAACCATCTATTAATATTTTGTTTGCATGGGGTTAACTT-TATTAAGTGCATTCTTTAT---GTGCATTTAGCTTTTCATGAGTATATTATGAAAGCAA----ATTATTTATTA----------TAAATTCTCATGCATATGAATAAATCG--CCTTCAATGTTCTGTAAAACATTAAAAT-AGGCACTAAATTTAAATGGCTCA---ACATTTAA-A--AGCCATATTTATTTAAAAGTTCTATATAATTTAAGGAAGTCTACAACAAAATTAATCTTTTGGAATAATGTAGaaaa--------at----aaatacataattaaaac-------------------------aaataaataataat--aattGGGCAATAATCTTG--CAGTG--TAGTACA---GTAATTTAG-ACTGTTATTTGAGACATGCAACAATTATGGGAGAAGTGTCTTATGCA------CTGCCCATACAGGGATACCAGA-TTTAATGCAGGGATTAGAGGATTTATATTACTCACTTAGCACCATGAGGAAAGTGACAGCAA-TGGAAGCTGAACT-GAC-TT-CACAAAGAGGTA----------AGAAGAGCATCACAG-ATG--GCATTGCTATG------TTCCCT-TCTTTATAACATAATCAATTAATATAtgtatgtgtgtgtgtgtgtgtgtgtgtg--tATCCCAAG-TTTAGAAATAG----GAAGAAAACGTACTGGAGAACTTC------AAATATCAAAGACATTTGAAATCTT--------TAG----AATTCAACATCAGTGT----TATCATAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=30197.000000 s hg38.chr18_GL383571v1_alt 149955 2 + 198278 TT s panTro5.chr18 65059986 2 + 78221452 TT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179055 2 + 77229886 TT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398530 2 + 17472758 TT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439017 2 - 152096393 TT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389053 2 + 70235451 TT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080463 2 - 75711847 TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13639659 2 - 18804593 TT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251478 2 + 18905526 TT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60079790 2 - 72318688 TC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 416855 2 - 1517660 TT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3512993 2 + 6513552 TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105282734 2 + 117903854 TT i calJac3.chr13 C 0 I 507 s saiBol1.JH378121 19470396 2 - 31320352 TT i saiBol1.JH378121 C 0 I 143 s cebCap1.NW_016107689v1 1666262 2 + 2203405 TT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3618958 2 - 14941987 TT i aotNan1.NW_018502140v1 I 142 C 0 s otoGar3.GL873546 11244609 2 - 20685099 TC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111854444 2 + 195471971 TT i mm10.chr1 C 0 C 0 s canFam3.chr1 112323695 2 - 122678785 TT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 497760 2 - 2150887 TT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=29668.000000 s hg38.chr18_GL383571v1_alt 149957 2 + 198278 GA s panTro5.chr18 65059988 2 + 78221452 GA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179057 2 + 77229886 GA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398532 2 + 17472758 GA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439019 2 - 152096393 GA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389055 2 + 70235451 GA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080465 2 - 75711847 GA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13639661 2 - 18804593 GA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251480 2 + 18905526 GA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60079792 2 - 72318688 GA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 416857 2 - 1517660 GA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3512995 2 + 6513552 GA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283243 2 + 117903854 GA i calJac3.chr13 I 507 C 0 s saiBol1.JH378121 19470541 2 - 31320352 GA i saiBol1.JH378121 I 143 C 0 s cebCap1.NW_016107689v1 1666264 2 + 2203405 GA i cebCap1.NW_016107689v1 C 0 I 161 s aotNan1.NW_018502140v1 3618960 2 - 14941987 GA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11244611 2 - 20685099 AA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111854446 2 + 195471971 GA i mm10.chr1 C 0 C 0 s canFam3.chr1 112323697 2 - 122678785 CA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 497762 2 - 2150887 GA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=137605.000000 s hg38.chr18_GL383571v1_alt 149959 14 + 198278 AAGAAAA----ATTACA-----T- s panTro5.chr18 65059990 14 + 78221452 AAGAAAA----ATTACA-----T- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179059 14 + 77229886 AAGAAAA----ATTACA-----T- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398534 14 + 17472758 AAGAAAA----ATTACA-----T- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439021 14 - 152096393 AAGAAAA----ATTACA-----T- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389057 14 + 70235451 AAGAAAA----ATTACA-----T- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080467 14 - 75711847 AAGAAAA----ATTACA-----T- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13639663 14 - 18804593 AAGAAAA----ATTACA-----T- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251482 19 + 18905526 AAGAAAA----ATTACATTCATT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60079794 19 - 72318688 AAGAAAA----ATTACATTCATT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 416859 19 - 1517660 AAGAAAA----ATTACATTCATT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3512997 19 + 6513552 AAGAAAA----ATTACATTCATT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283245 14 + 117903854 AAGAAAA----ATTACA-----T- i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19470543 14 - 31320352 AAGAAAA----ATTACA-----T- i saiBol1.JH378121 C 0 I 5 s aotNan1.NW_018502140v1 3618962 14 - 14941987 AAGAAAA----ATTACA-----T- i aotNan1.NW_018502140v1 C 0 I 5 s otoGar3.GL873546 11244613 14 - 20685099 GAGAAAA----ATTACA-----T- i otoGar3.GL873546 C 0 I 7 s mm10.chr1 111854448 14 + 195471971 ATTAAGA----CACACA-----T- i mm10.chr1 C 0 I 1 s canFam3.chr1 112323699 11 - 122678785 ---AAAA----ATTACA-----T- i canFam3.chr1 C 0 I 6 s dasNov3.JH575754 497764 19 - 2150887 GAGAAAATGTCATTTTA-----TT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e cebCap1.NW_016107689v1 1666266 161 + 2203405 I a score=2613408.000000 s hg38.chr18_GL383571v1_alt 149973 230 + 198278 TCAAGAGT----C--AGCAATACAGAAATCGTTTAAAGAAATAGTATAAAATAGGAAGAACAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAATTTATCTTTCTGTCCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTGATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTGCTG-TGTTC-AGATTTAGG s panTro5.chr18 65060004 230 + 78221452 TCAAGAGT----C--AGCAATACAGAAATCGTTTAAAGAAATAGTATAAAATAGAAAGAACAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAATTTATCTTTCTGTTCTACCAAGTATCATCTTGCCTAATATTTC----AG--TCTTTT-AAAAAGTTGATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTTTCCTTCAGTACTTTATTTGCTG-TGTTC-AGATTTAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179073 230 + 77229886 TCAAGAGT----C--AGCAATACAGAAATCGTTTAAAGAAATAGTATAAAATAGAAAGAACAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAATTTATCTTTCTGTTCTACCAAGTATCATCTTGCCTAATATTTC----AG--TCTTTT-AAAAAGTTGATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTTTCCTTCAGTACTTTATTTGCTG-TGTTC-AGATTTAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398548 230 + 17472758 TCAAGAGT----C--AGCAATACAGAAATCATTTAAATAAATAGTATAAAATAGAAAGAACAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAATTTATCTTTCTGTTCTACCAGGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTGATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTGCTG-TGTTC-AGATTTAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439035 228 - 152096393 TCAAGAGT----C--AGCAATACAGAAATCGTTTAAAGAAATAGTGT--AATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAATTTATCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTGATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389071 230 + 70235451 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAATAGTATAAAATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAACTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080481 230 - 75711847 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAATAGTATAAAATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAACTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13639677 230 - 18804593 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAATAGTATAAAATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAACTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----AGCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251501 231 + 18905526 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAATAGTATAAAATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCAGCTTAG----ATTATAACTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGGACTTTATTTTCTGTTGTTC-AGATTTAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60079813 230 - 72318688 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAATAGTATAAAATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAACTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 416878 231 - 1517660 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAATAGTATAAAATAGAAAGAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAACTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTGTTGTTC-AGATTTAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513016 226 + 6513552 TCAAGAGT----C--AGCAATACAGAAATCATTTAAAGAAACAGTATAAAAT----AAAGCAATTGCCATGTACTGTGAAACAGTATCGGCTTAG----ATTATAATTTGTCTTTCTGTTCTACCAAGTATCATCTTCCCTAATATTTC----AG--TCTTTT-AAATAGTTTATACAATA--ATTAACAC----ACCATTGTTATTGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283264 227 + 117903854 TCAAGAGT----C--AGCAATACAGAAATCATTT----AAATAGTATAATATAGAAAGAGCAATTATCATGTACTGTGAAACAGTATCGACTTAG-ATGATTATAATTTACCTTTCTGTTCTTTCAAGTTTCATCTACCCTAATATTTC----AG--TCTTTT-AAACAGTTTATACAATG--ATTAACAC------CACTGTTATGGTAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGGTTTAGG i calJac3.chr13 I 5 C 0 s saiBol1.JH378121 19470562 228 - 31320352 TCAAGAGT----C--AGCAATACAGAAATCATTT----AAATAATATAAAATAGAAAGAGCAATTGTCACGTACTGTGAAACAGTATCGACTTAATCTGATTATAATTTACCTTTCTGTTCTTTCAAGTTTCATCTACCCTAATATTTC----AG--TCTTTT-AAACAGTTTATACAATA--ATTAACAC------CACTGTTATGGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGATTTAGG i saiBol1.JH378121 I 5 C 0 s cebCap1.NW_016107689v1 1666427 220 + 2203405 TCAAGAGT----C--AGCAATACAGAAATCATTT----AAATAGTATAAAATAGAAAAAGCAACTGTCATGTACTATGAAACAGTATCGACTTAG-ATGATTACAATTTATCTTTCTGTTC-------TTTCATCTACCCTAATATTTC----AG--TCTTTT-AAAGAGTTTATACAATA--ATTAACAC------CACTGTCATGGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGGTTTAGG i cebCap1.NW_016107689v1 I 161 C 0 s aotNan1.NW_018502140v1 3618981 227 - 14941987 TCAAAAGT----C--AGCAATACAGAAATCATTT----AAACAGTATAAAATAGAAAGAGCAATTGTCATGTACTGTGAAACAGTATCAACTTAG-ATGATTATAATTTACCTTTCTGTTCTTTCAAGTTTCATCTATCCTAATATTTC----AG--TCTTTT-AAACAGTTTATACAATA--ATTAACAC------CACTGTTATGGGAATGATTCTCCTTGAGTACTTTATTTTCTG-TGTTC-AGGTTTAGG i aotNan1.NW_018502140v1 I 5 C 0 s otoGar3.GL873546 11244634 217 - 20685099 ACGAAAGT----CAGAGCAATACAGAAATAGTTTAAACAAATACTATAAAAT----AGAGCAATTGCACTGCACTGTGAAAAAGCATCTGCTCAG----ATTATAATTCATTTTTCTCATATACCA-----------CAATAAGATCTCAA--AG--TCTCTT-AAATAGTTTGTACAATA--ATTAACGC----ATTA--GTTACAGGAGGGATTCTCCTTGCGCACCTCGCTCTCTG-TGTTC-AGGTTCAGG i otoGar3.GL873546 I 7 C 0 s mm10.chr1 111854463 193 + 195471971 AGAATAGT----C--AGAAATACAGTAATAGTTTA-------AGCATTAAATAGGAA-AGGAACTACAATGT-------AACAGCAAGTACTATG----ATTATAGCTTTTGTTTTTA----ATCAAATTTTATCTACTCTAATATTCC----AGGATCTTTCAAAATACTTTAGACAATACTATGAGCATGGTAAGAATAAATGCTGCCATACTCCTCCCTG-------------CCA---------------- i mm10.chr1 I 1 C 0 s canFam3.chr1 112323716 216 - 122678785 TTAAGAGT----G--CACAATACAAAAATAGTTTAAAGAA-----ATAAAACAGAAAGGGTAATTGCAGTGTATTATGAAAAAG-GTTTGCTCAA----ATTATTCTTTATCATTTT----TCTCAAGGTTTAACTACAATAAGATTTCAAAGAG--ATTTTT-AAATAGTTCATAGA-----ATTAACAC------AATTGTTATAGGAGT-ATTCTCC-TGTGTACTTTACTTTCTG-TGCTCTAAGttca-- i canFam3.chr1 I 6 C 0 s dasNov3.JH575754 497783 225 - 2150887 TCAAGAGCATCAC--AACAATAT----ATAGTTTAATGGTAC---ATAAAATAGAAAGGTCAA-TGCAATGCACTATGAAACAG-ATATGCTCAG----ATTATAATTTGTTTCTTTTGTAT-CCAGGTTTTATCTACACCAAAATTTCAAAGAG--CCtttt-aaatattttataaaa-a--attaGCAT------GATTATGACAGGAATAGTAACTCTGGTACACTTTATTTTCTG-CATTC-AGATTTAGG i dasNov3.JH575754 C 0 I 488 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=747359.000000 s hg38.chr18_GL383571v1_alt 150203 68 + 198278 GT--------------TTCTCCTTTC----------TTCCCATTTCACTCCT----TTCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTCATTATTTAG s panTro5.chr18 65060234 68 + 78221452 GT--------------TTCTCCTTTC----------TTCTCATTTCACTCCT----TTCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTCATTATTTAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179303 68 + 77229886 GT--------------TTCTCCTTTC----------TTCTCATTTCACTCCT----TTCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTCATTATTTAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398778 68 + 17472758 GT--------------TTCTCCTTTC----------TTCCCATTTCACTCCT----TTCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTCATTATTTAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439263 68 - 152096393 GT--------------TTCTCCTTTC----------TTCCCATTTCACTCCT----TTCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTCATTATTTAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389301 68 + 70235451 GT--------------TTCTCCTTTC----------TTCCCATTTCACGCCT----TCCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTGATTATTTAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080711 68 - 75711847 GT--------------TTCTCCTTTC----------TTCCCATTTCACGCCT----TCCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTGATTATTTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13639907 68 - 18804593 GT--------------TTCTCCTTTC----------TTCCCATTTCACACCT----TCCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTGATTATTTAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251732 68 + 18905526 GT--------------TTCtcctttc----------ttcccatttcactcct----tccctccctc---ctttgttt-----------cctttcttcTCTGATTATTTAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080043 68 - 72318688 GT--------------TTCtcctttc----------ttcccatttcactcct----tccctccctc---ctttgttt-----------ccttccttcTGTGATTATTTAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417109 68 - 1517660 GT--------------TTCTCCTTTC----------TTCCCATTTCACTCCT----TCCCTCCCTC---CTTTGTTT-----------CCTTTCTTCTGTGATTATTTAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513242 68 + 6513552 GT--------------TTCtcctttc----------ttcccatttcactcct----tccctccctc---ctttgttt-----------cctttcttcGGTGATTATTTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283491 68 + 117903854 GT--------------CTTTCCTTTC----------TTCCCATTTCACTGCT----TCCCTCCCTC---CTTCGATT-----------CCTTTCTTCTGTCATTATTTAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19470790 72 - 31320352 Gt--------------ctctcctttc----------ttcccatttcactccttccctccctccctc---cttcgatt-----------cctttcttcTGTCATTATTTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1666647 68 + 2203405 GT--------------CTCTCCTTTA----------TTCCCATTTCACTCCT----TCCCTCCCTC---CTTCGATT-----------CCTTTCTTCTGTCATTATTTAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3619208 68 - 14941987 GT--------------CTCtcctttc----------ttcccatttcactcct----tccctccctc---cttcgatt-----------ccttTTTTCTGTCATTATTTAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11244851 95 - 20685099 CTCAGAGTGCTCATCCTGCCCCTTTCTGTCATTTCTTTCTCTTCTCCCTCCC----CGCTTCCCTCTCTCTTCACTT-----------TATTCCTTCTGGCATTATTTAT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111854656 57 + 195471971 ----------------TTTTCCTTCC----------CTGTCACTTCACAAAT----TCCTTCCTCC---CATCA--------------------TTCTCGCATTGTGCAC i mm10.chr1 C 0 C 0 s canFam3.chr1 112323932 79 - 122678785 tt--------------cattccttcc----------ttccttgctccctcct----ttccttcctt---ccttctttctcttttcctcccttcctGCTGGTATTATTTAC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 498008 488 - 2150887 I a score=747872.000000 s hg38.chr18_GL383571v1_alt 150271 62 + 198278 AAGACAGGGAAAAGAACAACAGAGTGTTG-TTTTTCCCCT-AAAACAAACTCTATTTGAATGTA s panTro5.chr18 65060302 62 + 78221452 AAGACAGGGAAAAGAACAACAGATTGTTG-TTTTTCCCCT-AAAACAAACTCTATTTGAATGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179371 62 + 77229886 AAGACAGGGAAAAGAACAACAGATTGTTG-TTTTTCCCCT-AAAACAAACTCTATTTGAATGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398846 63 + 17472758 AAGACAGGGAAAAGAACAACAGACTGTTG-TTTTTCCCCTAAAAACAAACTCTATTTGAATGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439331 62 - 152096393 AAGGCAGGGAAAAGAGCAACATATTGTTG-TTTTTTCCCT-AAAACAAACTCTATTTGAATATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389369 63 + 70235451 AAGACAGGGAAAAGAATAACAGATTGTTGTTTTTTTCCCT-AAAACAAACTCTATTTGAATATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080779 63 - 75711847 AAGACAGGGAAAAGAATAACAGATTGTTGTTTTTTTCCCT-AAAACAAACTCTATTTGAATATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13639975 62 - 18804593 AAGACAGGGAAAAGAATAACAGATTGTTG-TTTTTTCCCT-AAAACAAACTCTATTTGAATATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251800 62 + 18905526 AAGACAGGGAAAAGAATAACAGATTGTTG-TTTTTTCCCT-AAAACAAACTCTATTTGAATATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080111 62 - 72318688 AAGACAGGGAAAAGAATAACAGATTGTTG-TTTTTTCCCT-AAAACAAACTCTATTTGAATATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417177 62 - 1517660 AAGACAGGGAAAAGAATAACAGATTGTTG-TTTTTTCCCT-AAAACAAACTCTATTTGAATATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513310 62 + 6513552 AAGACAGGGAAAAGAATAACAGATTGTTA-TTTTTTCCCT-AAAACAAACTCTATTTGAATATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283559 61 + 117903854 AAGACAGGGAAAAGAACAACAGATTGCTG--CTTTTCCCT-AAAACAAACTCTATTTGAATATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19470862 61 - 31320352 AAGACAGGGAAAAGAACAACAGATTTTTG--CTTTTCCCT-AAAACAAACTCTATTTGAATATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1666715 61 + 2203405 AAGACAGGGTAAAGAACAACAGATTGTTG--CTTTTCCCT-AAAACAAACTCTATTTGAATATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3619276 61 - 14941987 AAGACAGGGAAAAGAACAACAGATTGTTG--ATTTTCCCT-AAAACAAACTCTATTTGAATATA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11244946 56 - 20685099 AAAGTAGGGAAAAGAACAG------ATTT-TTTTTTTCCT-AAAACAAATTCCATTTGAATATA i otoGar3.GL873546 C 0 I 210 s mm10.chr1 111854713 53 + 195471971 ----------AAAGAATACAAAATTTAAGACTTTTTTTCC-ATATTAGAAATTATTTGTATGTA i mm10.chr1 C 0 C 0 s canFam3.chr1 112324011 55 - 122678785 ATGACGTAGGAAAG---ACCAGATT-----TTTTTTTCCT-TAAATGAATTCCACTTGAGTATA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 498496 62 - 2150887 aaaacaGTGGGGAAAAGAACAGATTGCTC-TATTTTTCCT-AAAAAGAATTCTATTTGAATACA i dasNov3.JH575754 I 488 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=2597463.000000 s hg38.chr18_GL383571v1_alt 150333 242 + 198278 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--GCTTCTACTTGGTATAGCCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AA---GA--A--tgtttctttttagttccctctaagctgtcagcttcatggaggtagagcccatgtat----actttgttcaccattgcattcccaggattgagagctgtgcctggcacTTTGG--ATCTGGAGG-TCTCAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- s panTro5.chr18 65060364 243 + 78221452 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--GCTTCTACTTGGTATAGCCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AA---GA--A--TGTTTCTTTTTAGTTccctctaaactgtcagcttcatggaggtagagcccatgtat----actttgttcaccattgcattcccaggattgagagctgtgcctggaacTTTAG--ATCTGGAGGTTCTCAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179433 243 + 77229886 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--GCTTCTACTTGGTATAGCCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AA---GA--A--TGTTTCTTTTTAGTTccctctaaactgtcagcttcatggaggtagagcccatgtat----actttgttcaccattgcattcccaggattgagagctgtgcctggaacTTTAG--ATCTGGAGGTTCTCAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5398909 242 + 17472758 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--GCTTCTACTTGGTATAGCCTCC-----------TTTATGCTGGGAAA-TTGTGAAAAGTGGAAA----AA---GA--A--TGATTCTTTTTAGTTccctctaaactgtcagcttcatggaggtagagcccatgtat----aatttgttcaccactgcattcccaggattgagagctgtgcctggcacTTTGG--ATCTGGAGGTTCTCAGGG--------AGAGGGAGAGAAGGAAAAGAAAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439393 243 - 152096393 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--GCTTCTACTTGGTGTAGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AA---GA--A--tgtttctttttagttccctctaaactgtcagcttcatggaggtagggtccacgtat----acttgattcaccattgcattcccaggattgagagctgtgcctggcacTTTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389432 243 + 70235451 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTGGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtacagcccatgtat----actttgttcaccactgcattcccaggattcagaactgtgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63080842 243 - 75711847 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTGGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtacagcccatgtat----actttgttcaccactgcattcccaggattcagaactgtgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640037 243 - 18804593 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTGGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtacagcccatgtat----actttgttcaccactgcattcccaggattcagaactgtgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13251862 243 + 18905526 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTGGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtacagcccatgtat----actttgttcaccactgcattcccaggattcagaactgtgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080173 243 - 72318688 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTGGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtatagcccatgtat----actttgttcaccactgcattcccaggattcagaactgtgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417239 243 - 1517660 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTGGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtacagcccatgtat----actttgttcaccactgcattcccaggattcagaactgtgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGAGGGAGAGAAGGAAAAGAAAA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513372 243 + 6513552 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AG---CATTC--ACTTCTACTTGGTGTAGGCTCC-----------TTTATGCTGGGAAATTTGTGAAAAGTGGAAA----AG---GA--A--tgtttctttttagttccctcttaactgtcagctccatggaggtacagcccatgtat----actttgttcaccactgcattcccaagattgagaactatgcctggcacTGTGG--ATCTGGAGGTTCTTAGGG--------AGGGGGAGAGAAGGAAAAGAAAA- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283620 229 + 117903854 TTTGATCAACTGTTAGT-----CACAGAATTT---AC---AA---GATTCTTGCTTCTACTTGGTGTAGGCTCT-----------TTTTTGCTGGGAAATGTGTGAAAAGTGGAAA----AA---GA--A--TGTT----------------taaactgtcagctccatggaggtagggcccatgtgt----gctttgttcatgactgcattcccaggattgagagctgtgcctggcacTGTGG--ATCTGAAGGTACTTATGG--------GGAGAGTAGGAAGAGTAGGAAAA- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19470923 223 - 31320352 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AA---CATTCTCGCTTCTACTTGGTGTAGGC-----------------TTGCTGGGAAATGTGTGAAAAGTGGAAA----AA---GA--A--TGTT----------------taaaccgtcagctccatggaggtagggcccatgtat----gctttgtttacgattgcattcccaggattgagagctgtgcctggcaTTGTGG--ATCTGGAGGTACTTACGG--------GGAGAGTAGGAAGAGTAGGAAAA- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1666776 229 + 2203405 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AA---CATTCTCGCTTCTACTTGGTGTAGGCTCT-----------TTTTTGCTGGGAAATGTGTGAAAAGTGGAAA----AA---GA--A--TGTT----------------Caaactgtcagctccatggaggtagggcccatgtgt----gctttgttcatgactgcattcccagtattgagagctgtgcctggcacTGTGG--ATCTGGAGGTACTTACGG--------GGAGAGTAGGAAGAGTAGGAAAA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3619337 228 - 14941987 TTTGATCAACTGTTAGT-----CACAGAATTC---AC---AA---CATTCTCACTTCTACTTGGTGTAGGCTCT-----------TTTTTGCTGGGAAATGTGTGAAAAGTGGAAA----AA---GA--A--TGTt-----------------aaactgtcagttccatggaggtagagactatgtgt----gctttgttcacgactgcattcccaggattgagagctgtgcccggcacTGTGG--ATCTGGAGGTACTTACAG--------GGAGAGTAGGAAGAGTAGGAAAA- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11245212 244 - 20685099 TTTGATTAACTGTTAGT-----AGCGACAACTAGAAA---AG---CATTC--ACCTCCACTTGGTGTAGGCTCC-----------TTTATGCTCGGAACTTTGTAAAAAACAGAAA----AAACGGC--A--CTTTTCTTTACACAccgcactagactgtcagttccataaatgt-cggtccccacat----gcttcgttcaccgtcgcatttccagaactgaaagcagtgcctggtacTCCAG--GCCTAGACACACTTAGGG--------ACAGGGAG----GGAGAAGAAGA- i otoGar3.GL873546 I 210 C 0 s mm10.chr1 111854766 252 + 195471971 ----TTCAACTGTTAGTCACAACACAGAAAGG---AC---AA---TAT----ACTTCAATATAGTATAGGGTTTTTGGTGTTTTGTTTTTGTTGTTGTTGTTTTTTAAGGTAGGAACTTTGA---AA--A--TTTTGAT-------------CAGATGGTCAGTTCCATGGATGCAAGGTATATGGCA----GAGT--TTCTATATTACATTCTCTAGATTGAGCGTTACAGTGGGCGTTGTCGTTATCTGGACACACTTGTGGTTTTAAGTATATTATGGAAAGGATAGGAAAA- i mm10.chr1 C 0 I 419 s canFam3.chr1 112324066 225 - 122678785 TTAGAT----TGTTAGT-----CACAGATTTG---CCACAAG---TATGC--ACTCCCATTTGCTGTAGACTCC-----------TTTGAACTAGAAACATTGTGAAATGCAAAAT----AA---GA--atgtgtttctttctattccccactagactgtcagcgccacag---------------------gttttgttcacttttgcattcccagtattgatagctgtacctagcaATGTGG--GTCTGGAAGCACT--GGG--------AGAGGAGCAACAGGAAAAGATGC- i canFam3.chr1 C 0 I 5 s dasNov3.JH575754 498558 240 - 2150887 TGTGGTTGAC--TTATT-----TACAGAATTA---GC---AGGCACCTTT--AGTTCTGCTTTCTGTAGGCTC------------TTCGTGCT-----ATTTTTGAAAAGCAGAAA----AT---GACCA--TGTTTCCTCACAGTccctgctggactataaattccttgaaggtagggtccatgtgtgtgcgttttattcatgagtgca-tcccAAAATTGAGATCTGTA-CTAGTACTGT-G--ATCTGGAGTTACCT--GG--------TGGTGGAAAGATGTTTTGGCTTTA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=17100.000000 s hg38.chr18_GL383571v1_alt 150575 1 + 198278 G s panTro5.chr18 65060607 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179676 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399151 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439636 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389675 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081085 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640280 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252105 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080416 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417482 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513615 1 + 6513552 G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283849 1 + 117903854 G i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19471146 1 - 31320352 G i saiBol1.JH378121 C 0 I 1497 s cebCap1.NW_016107689v1 1667005 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 I 5 s aotNan1.NW_018502140v1 3619565 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 I 5 s otoGar3.GL873546 11245456 1 - 20685099 G i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324296 1 - 122678785 G i canFam3.chr1 I 5 C 0 s dasNov3.JH575754 498798 1 - 2150887 G i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I a score=2724004.000000 s hg38.chr18_GL383571v1_alt 150576 304 + 198278 CCTGACGGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACTGCCATTACTAGCAATGGTCT--ACACACA-GGCC-AGTCAGACCACACTCAGGCC----------------TTTTTTTTTTCTCTCTCTCTCCAGGGCATTCCTTGATATTCAAA-TACAGAG--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAATGGGAAT--GGCAAGAG-TGAGTTCCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACCCAGAATCTCTCTTAGAAG--------ATTGATGGGATGTGCTGTGAGAAGTAT-ATAGTC-AAAACCTA------------------GTGGTGATCGCTACTCAAA s panTro5.chr18 65060608 303 + 78221452 CCTGACGGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACTGCCATTACTAGCAATGGTCT--ACACACA-GGCC-AGTCAGACCACACTCAGGCC-----------------TTTTTTTTTCTCTCTCTCTCCAGGGCATTCCTTGATATTCAAA-TACAAAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAATGGGAAT--GGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACCCAGAATCTCTCTTAGAAG--------ATTGATGGGATGTGCTGTGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCGCTACTCAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179677 303 + 77229886 CCTGACAGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACTGCCATTACTAGCAATGGTCT--ACACACA-GGCC-AGTCAGACCACACTCAGGCC-----------------TTTTTTTCTCTCTCTCTCTCCAGGGCATTCCTTGATATTCAAA-TACAAAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAATGGGAAT--GGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACCCAGAATCTCTCTTAGAAG--------ATTGATGGGATGTGCTGTGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCGCTACTCAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399152 302 + 17472758 CCTGACGGAGCCTGAATCAAATGCACTGAGTTGTCCATCTTACTGCCATTACTAGCAACGGTCT--ACACACA-GGCC-AGTCAGACCACACTCAGGCC------------------TTTTTTTTCTCTCTCTCTCCAGGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GCTGAGTGAATGGGAAT--GGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACCCAGAATCTCTCTTAGAAG--------ATTGATGGGATGTGCTGTGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCGCTACTCAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439637 315 - 152096393 CCTGATGGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACTGCCATTACCAACAATGGTCT--ACACACA-GGCC-AGTCAGACCACACTCAGGCCTTTTTTT------TC-TTTTTTCTCTCTCTCTCTTTCCAGGGCATTCCTTGATATTCAAATTACAGAC--------CAAA-------------------CTTG---GGGTC------GTTGAGTGAGTGGGAAT--TGTGAGAGTTGAGTTTCAATGGTTTTA--TTCTATTTGCACTTATGGATAACCCAGAATCTCTCTTAGAAG--------ATTGATGGGACGTGCTGTGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389676 314 + 70235451 CCTGACAGAACCTGAGTCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ATACACA-GGCC-AGTCAGACCACACTCAGGctttctctt------tctctctctttctctctctctctcCACGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAGTGGAAGT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACACAGAATCTCTTTTAGAAG--------ATTGATGGGATGTGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081086 314 - 75711847 CCTGACAGAGCCTGAGTCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ATACACA-GGCC-AGTCAGACCACACTCAGGctttctctt------tctctctctttctctctctctctcCACGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GCTGAGTGAGTGGAAGT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACACAGAATCTCTTTTAGAAG--------ATTGATGGGATGTGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640281 314 - 18804593 CCTGACAGAGCCTGAGTCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ATACACA-GGCC-AGTCAGACCACACTCAGGctttctctt------tctctctctttctctctctctctcCACGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAGTGGAAGT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTTTGGATAACACAGAATCTCTTTTAGAAG--------ATTGATGGGAGGTGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252106 314 + 18905526 CCTGACAGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ATACACA-GGCC-AGTCAGACCACACTCAGGctttctctt------tctctctctttctctccctctctcCAGGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAGTGGGAGT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACACAGAATCTCTTTTAGAAG--------ATTGATGGGATGTGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080417 314 - 72318688 CCTGACGGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ATACACA-GGCC-AGTCAGACCACACTCAGGctttctctt------tctctctctttctctctctctctcCAGGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAGTGGCAGT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACACAGAATCTCTTTTAGAAG--------ATTGATGGGATGTGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417483 314 - 1517660 CCTGACAGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ATACACA-GGCC-AGTCAGACCACACTCAGGctttctctt------tctctctctttctctccctctctcCAGGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTA------GTTGAGTGAGTGGGACT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACACAGAATCTCTTTTAGAAG--------ATTGATGGGATGTGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGCTGATCTCTACTCAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513616 320 + 6513552 CCTGACGGAGCCTGAATCAAATACACTGAGTTGTCCATCTTACCGTCATTACTAGCAATGGTCT--ACACACA-GGCC-AGTCAGACCACACTCAGGCTTtctctttctctctctctctctctctctctctctctcCAGGGCATTCCTTGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---CGGTA------GTTGAGTGAGTGGGAGT--TGCAAGAG-TGAGTTTCAGTGGTTTTA--TTCTATTTGCACTTATGGATAACCCAGAATCTCTTTTAGAAG--------ATTGACGGGACATGCCATGAGAAGTAT-ATACTC-AAAACCTA------------------GTGGTGATCTCTACTCCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105283855 303 + 117903854 CCTGATGGAGCCTGAATCAAATACATTGAGTTGTTCTTCATACCACCATTACTAG-AGTGGTCC--ACACTCA-GGGCAAGTCAGACCACATTCAGGCA----------------------TTCTTTTTCTCTCTTCAGGTCATTCCTTGATATTCGAA-TACAGAC--------CAAA-------------------CTTG---GGATG------GTTGAGTGAGTGGAAAC--TCCAAGAG-TGAGTTACAGTAGTTGTA--TTCTGTTTGCACTTATGGATAACCCAGAATCTCTTTTAGAAGAGCTATTCATTGATAAGACATGCTGTGAGAAATAC-AGACTC-AAAACCCA------------------G---TGATCTCTACTCAAA i calJac3.chr13 I 5 C 0 s cebCap1.NW_016107689v1 1667011 293 + 2203405 CCTGATGGAGCCTGAATCAAACACATCAAGTTGTACTTTGTACCGCCATTACTAGCAGTGGTCC--ACACACA-GGGC-AGTGAGACCACACTCAGGCA----------------------TTTTTTTTCTCTCTTCAGGTCATTCC-TGATATTCAAA-TACAGAC--------CAAA-------------------CTTG---GAGTG------GTTGAGTGAGTGGAAAC--TCCAAGAG-TGAGTTACAGTAGTTTTA--T--TGTTTGCATTTATGGAT-------AATCTCTTTTAGAAGAGCTATTCATTGATGAGACATGCTGTGAGAAATAC-AGACTC-AAAACCCA------------------G---TGATCTCTACTCAAA i cebCap1.NW_016107689v1 I 5 C 0 s aotNan1.NW_018502140v1 3619571 301 - 14941987 CCTGACGGAGCCTGAAACAAATACATTGAGTTGTCCTTCGTACCACCATTACTAGCAGTGGTCC--ACACACA-GGGC-AGTCAGACCACACTCAGGCA----------------------TTTTTTTTCACTCTTCAGGTCATTCCTTG--ATTCAAA-TACAGAC--------CAAA-------------------CTTG---GGGTG------GTTGAGTGAGTGGAAAC--TCTAAGAG-TGAGTTACAGTAGTTTTA--TTTTGTTTGCACTTATGGATAACCCAGAATCTCTTTTAGAAGAGCTATTCATTGATGAGACATGCTGTGAGAAATAC-AGACTC-AAAACCCA------------------G---TGATCTCTACTCAAA i aotNan1.NW_018502140v1 I 5 C 0 s otoGar3.GL873546 11245457 340 - 20685099 TTTGCTGGAGGCAGAGTTAAACACGCTGAGTTAGCTTTTCTGCTGCCATTACTTCCAAGGAGGC--TCACACATTATC-AGTCAAACCAGACCCAGGCT-------------------------TTCTTCTGTCTTCAGGGCAGCCTTAGATATCCAAC-TGTGGAC--------CAAAAGTCTTTGTTATAAATGTGCTGG---GGGTA------GTTGAGCAGGTGGGAAC--CGCAGG---TGAGTGTCAGTGGCTTGA--TCTCATTTGCCCTCGTGGATAACCCTAAATTTATTTTGAAAGAGCTCCTCATCCATGGGGCGTGCTGTGACAACTAT-GGACTCAAAAACCTAATTAAGAAAAGAAGATAGGTGATCATCTCTCCCCAAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324297 272 - 122678785 CCAGTTGGACTCTGGATGAAGAACATGGTGTTATCCTTCTTACTGCCATTACTAG-AATGATCTGCACACACA-CACC-AGTCAGACCTCATTCACACA------------------------------TTCTTTTCAGAGTATCTCTTGATACTCACC-TACAG-C--------CAAATTTC---------------TTTG---TTGTGAATTGTGTTGGTTGAGTGGGAATGGGGAAAGAG-CGAGTGC---TGGTTTTG--TTCTATTGACACTGG----------------TCTTTTGGAAAAGCTACTCATTGATGGGATGTCC--TAGGACGGCC-AGAGCC-AAAATCTA------------------AT----------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 498799 276 - 2150887 CCAGCTGGATCCTGGATCACATACATTGACCTATTCCTCATATTGCTATTGTTAGCAATAATCT--GCATGCA-CACC-CACCAAATCACACTCAAGCA-------------------------TCCTTCTCTCTTCAGGGGATGCCTGCATATTCCCT-TATCGATGAGTTTAATAAA-------------------TGTGTCAAAGTA------GTTGAGTGAGTGGGAAT--GGGAAGAG-CG-----CAAATGTTTGAGCTTTTATTTGCAC-----------CCTGAATCTCTTTTGAACG-TCTACTTATTGACAGGATGTACTATGATGATAATCCTATTT-AGA------------------------------------------ i dasNov3.JH575754 C 0 I 54 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e saiBol1.JH378121 19471147 1497 - 31320352 I a score=225830.000000 s hg38.chr18_GL383571v1_alt 150880 23 + 198278 TTTACCTATCATAATTCCCCCTA s panTro5.chr18 65060911 23 + 78221452 TTTACCTATCATAATTCCCCCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64179980 23 + 77229886 TTTACCTATCATAATTCCCCCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399454 23 + 17472758 TTTACCTATCATAATTCCCCCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439952 23 - 152096393 TTTACCTATCATAATTCTCCCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57389990 23 + 70235451 TTTACCTATCATAATTCCCCCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081400 23 - 75711847 TTTACCTATCATAATTCCCCCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640595 23 - 18804593 TTTACCTATCATAATTCCCCCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252420 23 + 18905526 TTTACCTATCATAATTCCCCCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080731 23 - 72318688 TTTACCTATCATAATTCCCCCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417797 23 - 1517660 TTTACCTATCATAATTCCCCCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513936 23 + 6513552 TTTACTTATCATAAATCCCCCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284158 23 + 117903854 TTTACCTATCATAATCCCCCTAA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1667304 23 + 2203405 TTTACCTATCATAATCCCCCCTA i cebCap1.NW_016107689v1 C 0 I 12 s aotNan1.NW_018502140v1 3619872 23 - 14941987 TTTACCTATCATAATCCCCCCTA i aotNan1.NW_018502140v1 C 0 I 13 s otoGar3.GL873546 11245797 19 - 20685099 TTTACCCA----AACTCCCCCTA i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 499075 54 - 2150887 I e canFam3.chr1 112324569 0 - 122678785 C e saiBol1.JH378121 19471147 1497 - 31320352 I a score=52148.000000 s hg38.chr18_GL383571v1_alt 150903 9 + 198278 GTTAATTGA s panTro5.chr18 65060934 9 + 78221452 GTTAATTGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180003 9 + 77229886 GTTAATTGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399477 9 + 17472758 GTTAATTGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439975 9 - 152096393 GTTAATTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390013 9 + 70235451 ATTAATTGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081423 9 - 75711847 ATTAATTGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640618 9 - 18804593 ATTAATTGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252443 9 + 18905526 ATTAATTGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080754 9 - 72318688 ATTAATTGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417820 9 - 1517660 ATTAATTGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513959 9 + 6513552 ATTAATTGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284181 9 + 117903854 CTCAATAAA i calJac3.chr13 C 0 I 599 s otoGar3.GL873546 11245816 6 - 20685099 ---ACCTGA i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 499075 54 - 2150887 I e canFam3.chr1 112324569 0 - 122678785 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I e saiBol1.JH378121 19471147 1497 - 31320352 I a score=47135.000000 s hg38.chr18_GL383571v1_alt 150912 7 + 198278 TATGTTA s panTro5.chr18 65060943 7 + 78221452 TATGTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180012 7 + 77229886 TATGTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399486 7 + 17472758 TATGTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439984 7 - 152096393 TATGTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390022 7 + 70235451 TATCTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081432 7 - 75711847 TATCTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640627 7 - 18804593 TATCTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252452 7 + 18905526 TATCTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080763 7 - 72318688 TACCTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417829 7 - 1517660 TATCTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513968 7 + 6513552 TATCTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284789 7 + 117903854 TATCTTA i calJac3.chr13 I 599 C 0 s saiBol1.JH378121 19472644 7 - 31320352 TATCTTA i saiBol1.JH378121 I 1497 C 0 s otoGar3.GL873546 11245822 7 - 20685099 CAAACTA i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 499075 54 - 2150887 I e canFam3.chr1 112324569 0 - 122678785 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I a score=306161.000000 s hg38.chr18_GL383571v1_alt 150919 69 + 198278 GAATGTTAGGGAAACTTACCTCTGGAAGTAGCGTTATACTCCCTTCTATTaaaagaaaaaaagaaaaag s panTro5.chr18 65060950 60 + 78221452 GAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTATATTCCCTTCTATTaaaagaaaaa--------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180019 57 + 77229886 GAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTATATTCCCTTCTATTAAAAGAA------------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399493 58 + 17472758 GAATGTTAGGGAACCTTACCTCTGGAAGCAGCGTTATACTCCCTTCTATTAAAAGAAA----------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139439991 54 - 152096393 GAATGTTAGGGAACCTTACCTCTGGAAGTA--GTTATACTCCCTTCTATTAAAAAG------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390029 51 + 70235451 GAATGTTAGGGAATCTTACCTCTGGAAGTAGTGTTATATTCCCTTCTATT------A------------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081439 51 - 75711847 GAATGTTAGGGAATCTTACCTCTGGAAGTAGTGTTATATTCCCTTCTATT------A------------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640634 56 - 18804593 GAATGTTAGGGAATCTTACCTCTGGAAATAGTGTTATATTCCCTTCTATT-aaaaaa------------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252459 51 + 18905526 GAATGTTAGGGAATCTTACCTCTGGAAGTAGTGTTATATTCCCTTCTATT------A------------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080770 51 - 72318688 GAATGTTAGGGAATCTTACCTCTGGAAGTAGTGTTATATTCCCTTCTATT------A------------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417836 50 - 1517660 GAATGTTAGGGAATCTTACCTCTGGAAGTAGTGTTATATTCTCTTCTATT------------------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3513975 57 + 6513552 GAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTACATTCCCTTCTATTaaaaaaa------------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284796 57 + 117903854 GAATGTTAGGGAGCCTTACCTCTGGAAGTAGTGTTATACTGCTTTCtatttaaaaaa------------ i calJac3.chr13 C 0 T 663 s saiBol1.JH378121 19472651 46 - 31320352 GAATGTTAGGGAGCTTTACCTCTGGAAGTAGTGTTATAATGCTATT----------------------- i saiBol1.JH378121 C 0 C 0 s canFam3.chr1 112324569 23 - 122678785 -----TTAGaaaat----------aaaaaaaaaaaaaa------------------------------- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 499075 54 - 2150887 I e otoGar3.GL873546 11245829 0 - 20685099 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I a score=215382.000000 s hg38.chr18_GL383571v1_alt 150988 36 + 198278 aaaaaaaaaGCATCTTCAATGTGCTAACCTTGTGCA s panTro5.chr18 65061010 36 + 78221452 aaaaaaaaaGCATCTTCAATGTGCTAACCTTGTGCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180076 36 + 77229886 AAAAAAAAAGCATCTTCAATGTGCTAACCTTGTGCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399551 36 + 17472758 AAAAAAAAAGCATCTTCAATGTGCTAACCTTGTGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440045 35 - 152096393 AAAAAAAAAGCA-CTTCAATGTGCTAACCCTGTGCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390080 36 + 70235451 AAAAAAAAAAAATCTTCAACGTGCTAACCTTGTGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081490 36 - 75711847 AAAAAAAAAAAATCTTCAACGTGCTAACCTTGTGCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640690 36 - 18804593 aaaaaaaaaaaaTCTTCAACGTGCTAACCTTGTGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252510 36 + 18905526 AAAAAAAAAAAATCTTCAACGTGCTAACGTTGTGCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080821 36 - 72318688 AAAAAAAAAAAATCTTCAACGTGCTAACATTGTGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417886 35 - 1517660 -AAAAAAAAAAATCTTCAACGTGCTAACCTTGTGCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514032 36 + 6513552 aaaaaaaaaaaaTCTTCAACGTGCTAACCTTGTGCA i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19472697 28 - 31320352 -AAAAAAAAGCATCTTCAATATGCTAA-------CA i saiBol1.JH378121 C 0 C 0 s canFam3.chr1 112324592 22 - 122678785 aaaaaaaaa-----------GTGGTGATCTT---CA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e calJac3.chr13 105284853 663 + 117903854 T e dasNov3.JH575754 499075 54 - 2150887 I e otoGar3.GL873546 11245829 0 - 20685099 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I a score=49185.000000 s hg38.chr18_GL383571v1_alt 151024 10 + 198278 TCACTTTAGT s panTro5.chr18 65061046 10 + 78221452 TCACTTCAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180112 10 + 77229886 TCACTTTAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399587 10 + 17472758 TCACTTTAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440080 10 - 152096393 TCACTTCAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390116 10 + 70235451 TTACTTTAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081526 10 - 75711847 TTACTTTAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640726 10 - 18804593 TTACTTTAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252546 10 + 18905526 TTACTTTAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080857 10 - 72318688 TTACTTTAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417921 10 - 1517660 TTACTTTAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514068 5 + 6513552 -----TCCGT i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19472725 10 - 31320352 TCACTTTAGT i saiBol1.JH378121 C 0 T 532 s canFam3.chr1 112324614 3 - 122678785 TCC------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499129 10 - 2150887 TTACCCAAAT i dasNov3.JH575754 I 54 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e calJac3.chr13 105284853 663 + 117903854 T e otoGar3.GL873546 11245829 0 - 20685099 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I a score=167116.000000 s hg38.chr18_GL383571v1_alt 151034 30 + 198278 GATGTATACCTCAAGTAACTT----GCAAGAAGT s panTro5.chr18 65061056 30 + 78221452 GATGTATACCTCAAGTAACTT----GCAAGAAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180122 30 + 77229886 GATGTATACCTCAAGTAACTT----GCAAGAAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399597 30 + 17472758 GATGTATACCTCAAGTAACTT----GCAAGAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440090 30 - 152096393 GACATATACCTCAAGTAACCT----GCAAGAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390126 30 + 70235451 GACGTATACCTCAAGCAACTT----GCAAGAAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081536 30 - 75711847 GACGTATACCTCAAGCAACTT----GCAAGAAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640736 30 - 18804593 GACGTATACCTCAAGCAACTT----GCAAGAAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252556 30 + 18905526 GATGTATACCTTAAGCAACTT----GCAAGAAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080867 30 - 72318688 GACGTATACCTCAAGTAACTT----GCAAGAAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417931 30 - 1517660 GACGTATACCTCAAGCAACTT----GCAAGAAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514073 30 + 6513552 GATGTATACCTCAAGTAACTT----GCAAGAAGT i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112324617 33 - 122678785 -AAGTTTACCAGTCATAACTTCCTCTCAGTAAAT i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 499139 22 - 2150887 AATATTTAACT-AGATAACCC----AC------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e calJac3.chr13 105284853 663 + 117903854 T e otoGar3.GL873546 11245829 0 - 20685099 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=13045.000000 s hg38.chr18_GL383571v1_alt 151064 3 + 198278 TTC s panTro5.chr18 65061086 3 + 78221452 TTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180152 3 + 77229886 TTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399627 3 + 17472758 TTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440120 3 - 152096393 TTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390156 3 + 70235451 TTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081566 3 - 75711847 TTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640766 3 - 18804593 TTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252586 3 + 18905526 TTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080897 3 - 72318688 TTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417961 3 - 1517660 TTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514103 3 + 6513552 TTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284190 3 + 117903854 TTA i calJac3.chr13 T 663 C 0 s canFam3.chr1 112324652 1 - 122678785 C-- i canFam3.chr1 I 2 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e dasNov3.JH575754 499161 0 - 2150887 C e otoGar3.GL873546 11245829 0 - 20685099 C e aotNan1.NW_018502140v1 3619895 13 - 14941987 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=31295.000000 s hg38.chr18_GL383571v1_alt 151067 3 + 198278 TTC s panTro5.chr18 65061089 3 + 78221452 TTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180155 3 + 77229886 TTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399630 3 + 17472758 TTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440123 3 - 152096393 TTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390159 3 + 70235451 TTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081569 3 - 75711847 TTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640769 3 - 18804593 TTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252589 3 + 18905526 TTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080900 3 - 72318688 TTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417964 3 - 1517660 TTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514106 3 + 6513552 TTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284193 3 + 117903854 TTC i calJac3.chr13 C 0 C 0 s aotNan1.NW_018502140v1 3619908 3 - 14941987 TTC i aotNan1.NW_018502140v1 I 13 C 0 s otoGar3.GL873546 11245829 3 - 20685099 TGC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324653 3 - 122678785 TCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499161 2 - 2150887 -TC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e cebCap1.NW_016107689v1 1667327 12 + 2203405 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=375401.000000 s hg38.chr18_GL383571v1_alt 151070 34 + 198278 TTTTTCCTCATAACCG--TGCTGTTTCAGAAATAAA s panTro5.chr18 65061092 34 + 78221452 TTTTTCCTCATAACCA--TGCTGTTTCAGAAATAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180158 34 + 77229886 TTTTTCCTCATAACCA--TGCTGTTTCAGAAATAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399633 34 + 17472758 TTTTTCCTCATAACCA--TGCTGTTTCAGAAATAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440126 34 - 152096393 TTTTTCCTCATAACCA--TGCTGTCTCAGAAATAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390162 34 + 70235451 TTTTTCCTTATAACCA--CGCTGTTTCAGAAATAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081572 34 - 75711847 TTTTTCCTTATAACCA--CGCTGTTTCAGAAATAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640772 34 - 18804593 TTTTTCCTTATAACCA--CGCTGTTTCAGAAATAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252592 34 + 18905526 TTTTTCCTCATAACCA--CGCTGTTTCAGAAATAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080903 34 - 72318688 TTTTTCCTCATAACCA--CGCTGTTTCAGAAATAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 417967 34 - 1517660 TTTTTCCTCATAACCA--CGCTGTTTCAGAAATAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514109 34 + 6513552 TTTTTCCTCAGAACCA--CGCTGTTTCAGAAATAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284196 33 + 117903854 TTTTTCCTC-TAACAT--TGCTGTTTCAGAAATAAA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1667339 33 + 2203405 TTTTTCCTC-TAACCA--TGCTGTTTCAGAAATAAA i cebCap1.NW_016107689v1 I 12 C 0 s aotNan1.NW_018502140v1 3619911 33 - 14941987 TTTTTCCTC-TAACCA--TGCTGTTTCAGAAATAAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11245832 36 - 20685099 CTTGTCCTCATAACTACCCTCTGTTTCAGAAACAAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324656 30 - 122678785 --TTTCCTCACAACCA----CCGTTTCAGAAATAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499163 34 - 2150887 CCTTTCCTCACAATCA--CTCTATTTTGGAAATAAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41533447 754 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=615473.000000 s hg38.chr18_GL383571v1_alt 151104 57 + 198278 ----TAAGCCATGTCTAC--TATAGAACAGCTA---CCACTTCTTGGGGCTTTTCCTTGGGTGGTA s panTro5.chr18 65061126 57 + 78221452 ----TAAGCCATGTCTAC--TATAGAACAGCTA---CCACTTCTTGGGGCTTTTCCTTGGGTGGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180192 57 + 77229886 ----TAAGCCATGTCTAC--TATAGAACAGCTA---CCACTTCTTGGGGCTTTTCCTTGGGTGGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399667 57 + 17472758 ----TAAGCCATGTCTAC--TATAGAACAGCTA---CCACTTCTTGGGGCTTTTCCTTGGGTGGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440160 57 - 152096393 ----TAAGCCATGTCTAC--TATAGAACAGGTA---CCACTTCTTGGGGCTTCTCCTTGGGTGGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390196 57 + 70235451 ----TAAGCCATGTCTAT--TATAGAACAGGTA---CCACTTCCTGGGGTTTTTCCTTGGGTGGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081606 57 - 75711847 ----TAAGCCATGTCTAT--TATAGAGCAGGTA---CCACTTCCTGGGGTTTTTCCTTGGGTGGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640806 57 - 18804593 ----TAAGCCATGTCTAT--TATAGAACAGGTA---CCACTTCCTGGGGTTTTTCCTTGGGTGGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252626 57 + 18905526 ----TAAGCCATGTCTAT--TATAGAACAGGTA---CCACTTCCTGGGGTTTTTCTTTGGGTGGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080937 57 - 72318688 ----TAAGCCATGTCTAT--TATAGAACAGGTA---CCACTTCCTGGGGTTTTTCCTTGGGTGGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418001 57 - 1517660 ----TAAGCCATGTCTAT--TACAGAACAGGTA---CCACTTCCTGGGGTTTTTCCTTGGGTGGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514143 56 + 6513552 ----TAAGCCATGTCTAT--CATA-AACAGGTA---CCACTTCCTGGGGCTTTTCCTTGGGTGGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284229 56 + 117903854 ----T-AGCCATGTCTAC--TATAGAACAGGTA---CCACTTCTTGGTGCTTTTCCTTGGATGGTA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1667372 57 + 2203405 ----TAAGCCATGTCTAC--TATAGAACAGGTA---CCACTTCCTGGTGCTTTTCCTTGAATGGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3619944 57 - 14941987 ----TAAGCCATGTCTAC--TATAGAACAGGTA---CCACTTCTTGGTGCTTTTCCTTGGATAGTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41534201 57 + 83067054 ----taaACCATGTCTAC--TACAGAACAGGTA---CCACTTTTTGGTGCCTTTCCTTGGGTGGTA i micMur3.chr19 I 754 I 97 s otoGar3.GL873546 11245868 55 - 20685099 --------CCATGTCTCCAGTACAAGTCAGCTA---GCACTTTTTGGTGCATTTCCTTGACACCAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324686 51 - 122678785 ----GAAACCAGATCTAC--TGAAAAACA---------ACTGTTTAGTGTCTTTCCTCTGGTGGTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499197 54 - 2150887 TAACTAAACCATTTCTAC--TACAGAACGGATGTTTTCACTTC-------TTTCCTTTGGGTG--- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=512882.000000 s hg38.chr18_GL383571v1_alt 151161 50 + 198278 ATCACTACCTTGCATGCCCCTCCTCTCACTCTTTCTCTTCCTGATGAATT s panTro5.chr18 65061183 50 + 78221452 ATCACTACCTTGCATGCCCCTCCTCTCACTCTTTCTCTTCCCGATGAATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180249 50 + 77229886 ATCACTACCTTGCATGCCCCTCCTCTCACTCTTTCTCTTCCTGATGAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399724 50 + 17472758 ATCACTACCTTGCATGCCCCTCCTCTCACTCTTTCTCTTCCTGATGAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440217 50 - 152096393 ATCACTACCTTGCATGCCCCTCCTCTTGCTCTTTATCTTCCTGATGAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390253 50 + 70235451 ATCACTACCTTGCATACCCCTCCTCTCGCTCCTTCTCTTTCTGATGAATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081663 50 - 75711847 ATCACTACCTTGCATACCCCTCCTCTCGCTCCTTCTCTTTCTGATGAATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640863 50 - 18804593 ATCACTACCTTGCATACCCCTCCTCTCGCTCCTTCTCTTTCTGATGAATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252683 50 + 18905526 ATCACTACCTTGCATACCCCTCCTCTCGCTCCTTCTCTTTCTGATGAATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60080994 50 - 72318688 ATCACTACCTTGCATACCCCTCCTCTCGCTCCTTCTCTTTCTGATGAATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418058 50 - 1517660 ATCACTACCTTGCATACCCCTCCTCTCGCTCCTTCTCTTTCTGATGAATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514199 50 + 6513552 ATCACTACCTTGCATGCCCCTCCTCTTGCTCTTTCTCTTTCTAATGAATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284285 50 + 117903854 ATCACTACCTTGCATGCCCCTCCTCTTACTCCTCCTCTTCCTGAGGAACT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1667429 50 + 2203405 ATCACCATCTTGCATGCCCCTCCTCTCACTCCTCCTCTTCCTGATGAACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620001 50 - 14941987 ATCACTACCTTGCATGCCCCTCCTCTCACTCCTCCTCTTCCTGATGAACT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11245923 43 - 20685099 ATCACCACCCCCAGGGCCTCTCCTCTC-------CTCTTACAGATGAAAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324737 44 - 122678785 ATCACTACCTGGCATGTTCCCCCTTG------TCGACTTCTTGGTGAATT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499251 36 - 2150887 ----------TATATGCCCCTACTCT----CTTTCTCTTTTTGATGAGTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534258 97 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1273500 888 - 1406956 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=173858.000000 s hg38.chr18_GL383571v1_alt 151211 17 + 198278 CCTAAGAGTTTCAAAGT s panTro5.chr18 65061233 17 + 78221452 CCTAAGAGTTTCAAAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180299 17 + 77229886 CCTAAGAGTTTCAAAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399774 17 + 17472758 CCTAAGAGTTTCAAAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440267 17 - 152096393 CCTAAGAGTTTCAAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390303 17 + 70235451 CCTAAGACTTTCAAAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081713 17 - 75711847 CCTAAGACTTTCAAAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640913 17 - 18804593 CCTAAGACTTTCAAAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252733 17 + 18905526 CCTAAGACTTTCAAAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081044 17 - 72318688 CCTAAGAGTTTCAAAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418108 17 - 1517660 CCTAAGACTTTCAATGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514249 17 + 6513552 CCTAAGAGTTTCAAAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284335 17 + 117903854 CCTAATAGTTTCAAAGT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1667479 17 + 2203405 CCTAATAGTTTCAAAGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620051 15 - 14941987 CCTAATAGTTTCAGT-- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1274388 17 - 1406956 cctaatagttttgaagt i proCoq1.NW_012148742v1 I 888 C 0 s otoGar3.GL873546 11245966 16 - 20685099 CCTAGTGG-TTTGAAGT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324781 17 - 122678785 CCTATTAGCTTTGAAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499287 17 - 2150887 TCTACTAGTCTTGAAAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534258 97 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e saiBol1.JH378121 19472735 532 - 31320352 T a score=439001.000000 s hg38.chr18_GL383571v1_alt 151228 37 + 198278 CTCTAGAGAGATTGCCAATTCCTCACTGAGGATATTC s panTro5.chr18 65061250 37 + 78221452 CTCTAGAGAGATTGCCAATTCCTCACTGAGCATATTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180316 37 + 77229886 CTCTAGAGAGATTGCCAATTCCTCACTGAGCATATTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399791 37 + 17472758 CTCTAGAGAGATTGCCAATTCCTCACTGAGCATATTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440284 37 - 152096393 CTCTAGAGAGACTGCCAATTCCTCACTGAGCAGATTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390320 37 + 70235451 CTCTAGAGAGACTGCCAATTCCTCAATGAGCAGATTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081730 37 - 75711847 CTCTAGAGAGACTGCCAATTCCTCAATGAGCAGATTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640930 37 - 18804593 CTCTAGAGAGACTGCCAGTTCCTCAATGAGCAGATTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252750 37 + 18905526 CTCTAGAGAGACTGCCAATTCCTCAATGAGCAGATTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081061 37 - 72318688 CTCTAGAGAGACTGCCAATTCCTCAATGAGCAGATTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418125 37 - 1517660 CTCTAGAGACACTGCCAATTCCTCAATGAGCAGATTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514266 35 + 6513552 CTCTAGAG--ACTGCCAATTCCTCAATGAGCAGATTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284352 37 + 117903854 CTCTAGAGAGACTGCCAATTCTTCACAGAGCAGATTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472203 37 - 31320352 CTCTAGAGAGACTGCCAATTCTTCACAGAGCAGATTC i saiBol1.JH378121 T 532 C 0 s cebCap1.NW_016107689v1 1667496 37 + 2203405 CTCTAGAGAGACTGTCAATTTTTCACAGAGCAGATTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620066 17 - 14941987 --------------------CTCTACAGAGCAGATTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1274405 37 - 1406956 ctctagatagactgccatttcctcacaggGCAGGTTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11245982 37 - 20685099 CTCTAGAGAGACTGACCGTTCCTCACAGGCCAGGCTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324798 35 - 122678785 --CTGTAAAGACTGCCAATTCCTCACACAGCAGGGAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499304 37 - 2150887 CTCTAGAGAGACTGCCAGTTTATCATAGGACTGGATC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534258 97 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I a score=872539.000000 s hg38.chr18_GL383571v1_alt 151265 59 + 198278 ATAGTCAATTGATTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC s panTro5.chr18 65061287 59 + 78221452 ATAGTCAAATGATTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180353 59 + 77229886 ATAGTCAAATGATTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399828 59 + 17472758 ATAGTCAATTGATTTTTATGTTCTTCCTTTATGCCAATCAGTACCTTGACAGTAGATAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440321 59 - 152096393 ATAGTCAATTGATTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390357 59 + 70235451 ATAGTCAATTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081767 59 - 75711847 ATAGTCAATTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13640967 59 - 18804593 ATAGTCAATTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252787 59 + 18905526 ATAGTCAATTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081098 59 - 72318688 ATAGTCAACTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAATAGATAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418162 59 - 1517660 ATAGTCAATTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTATATAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514301 58 + 6513552 ATAGT-AATTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTTGACAGTAGATAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284389 59 + 117903854 ATAGTCAACTGACTTTTATGTTCTTCCTTTATGCTAATCAGTACCTGGACAGTAGACCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472240 59 - 31320352 ATAGTCAACTGACTTTTATGTTCTTCCTTTATGCTAATCAGTATCTGGACAGTAGACCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667533 59 + 2203405 ATAGTCAACTGACTTTTATGTTATTCCTTTATGCTAATCAGTATCTGGACAGTAGACCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620083 59 - 14941987 ATAGTCAACTGACTTTTATGTTCTTTCTTTATGCTAATCAGTACCTGGACAGTAGACCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41534355 59 + 83067054 ATAGCCAATTGATTTTTGCATTCTTCCTTCATGCTAGTCAGCACCTTGATGGTAGATAC i micMur3.chr19 I 97 I 34 s proCoq1.NW_012148742v1 1274442 59 - 1406956 ATAGCCAATTGATTTTTACCTTCTTCCTTCATGCTAGTCAACACCTTGACGATAGATAC i proCoq1.NW_012148742v1 C 0 I 492 s otoGar3.GL873546 11246019 51 - 20685099 ATAG-----TGATTTTTGTATTCTACCTTCATGCCAG---ACACCTTGAGAGTAGAAAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324833 59 - 122678785 ATAGTCAACTGATTTTTCTGTTCTTCCCTCACACTGGTCAGGATCCAGAAGATaaaaaa i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499341 57 - 2150887 ATGGTCAACTGATTTTTGTGTTCTTCCCTTGTTCTAGTCAGT--CTGTACAGTACATAC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111855018 419 + 195471971 I a score=425093.000000 s hg38.chr18_GL383571v1_alt 151324 78 + 198278 ATTGATTGTTCCTTTTATTCAAAAGTACCCGTTGATTCAAAAGTAAC---AAAAGTGTGGTGAAT----AGGCAAATAAAT-AATG s panTro5.chr18 65061346 78 + 78221452 ACTGATTGTTCCTTTTATTCAAAAGTACCCGTTGATTCAAAAGTAAC---AAAAGTGTGGTGAAT----AGGCAAATAAAT-AATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180412 78 + 77229886 ACTGATTGTTCCTTTTATTCAAAAGTACCCGTTGATTCAAAAGTAAC---AAAAGTGTGGTGAAT----AGGCAAATAAAT-AATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399887 78 + 17472758 ACTGATTGTTCCTTTTATTCAAAAGTACCCGTTGATTCAAAAGTAAC---AAAAGTGTGGTGAAT----AGGCAAATAAAT-AATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440380 78 - 152096393 ATTGATTGTTCCTTTTATTCAAAAGTATCTGTTCATTCAAAAGTAAC---AAAAGTGTGGTGAAT----AGGCAAATTAAC-AATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390416 78 + 70235451 ACTGATTGGTCCTTTTATTCAAAAGTATCCATTCATTCAAAAGTAAC---AAAAGTATGGTGAAC----AGTCAAATTAAT-AATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081826 78 - 75711847 ACTGATTGGTCCTTTTATTCAAAAGTATCCATTCATTCAAAAGTAAC---AAAAGTATGGTGAAC----AGTCAAATTAAT-AATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641026 78 - 18804593 ACTGATTGGTCCTTTTATTCAAAAGTATCCATTCATTCAAAAGTAAC---AAAAGTATGGTGAAC----AGTCAAATTAAT-AATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252846 78 + 18905526 AGTGATTGGTCCTTTTATTCAAAAGTATCCATTCATTCAAAAGTAAC---AAAAGTATGGTGAAC----AGTCAAATTAAT-AACG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081157 78 - 72318688 ACTGATTGATCCTTTTATTCAAAAGTATCCATTCATTCAAAAGTAAC---AAAAGTATGGTGAAC----AGTCAAATTAAT-AATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418221 78 - 1517660 ACTGATTGGTCCTTTTATTCAAAAGTATCCATTCATTCAAAAGTAAC---AAAAGTATGGTGAAC----AGTCAAATTAAT-AATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514359 78 + 6513552 ACTAATTGGTCATTTTATTCAAAAGTATCTGTTCATTCAAAAGTAAT---AAAAGTATGGTGAAC----AGTCAAATTAAT-AATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284448 34 + 117903854 AC--------------------------------------------C---AAAAATATGGTAAAT----AGGCAAATTAAC-AATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472299 34 - 31320352 AC--------------------------------------------C---AAAAATATGGTAAAT----AAGCAAATTAAC-AATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667592 34 + 2203405 AC--------------------------------------------C---AAAAATATGGTAAAT----AGGCAAATTAAC-AATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620142 34 - 14941987 AC--------------------------------------------C---AAAAATATGGTAAAT----AGGCAAATTAAC-AATG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11246070 35 - 20685099 ----------CC----------------------------------C---CAAAATACGGTGAAT----GAGAGAACTGATGAATG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324892 64 - 122678785 --------------aaaaaaaaaaaaaaaaaaGGATCCAGAAGATACCCAAAAGGTATAGTGAAT----AAATGAACTGAT-A--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499398 35 - 2150887 -----------------------------------------------TCAAGAACTGTGCTGAATGATAGGGTGGATGGAT-A--- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534414 34 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I a score=556715.000000 s hg38.chr18_GL383571v1_alt 151402 53 + 198278 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------tagaactgaaaaaacat s panTro5.chr18 65061424 53 + 78221452 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------tagaactgaaaaaacat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180490 53 + 77229886 AATTATAAGTCCATTCAAAATTCCTTCAAAAAA-ctt--------tagaactgaaaaaacat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5399965 53 + 17472758 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-Gtt--------tagaactgaaaaaacat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440458 44 - 152096393 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-CTT--------TAG---------Aacat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390494 53 + 70235451 AATTATAAATCCCTTCAAAATTCCTTCAAAAAA-ctt--------ttgaattgaaaaaacat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081904 53 - 75711847 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------ttgaattgaaaaaacat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641104 53 - 18804593 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------ttgaattgaaaaaacat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252924 53 + 18905526 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------ttgaattgaaaaaacat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081235 48 - 72318688 AATTACAAATCCATTCAAAATTCCTTCAAAAAA-CTT-------------TTGAAAAAACAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418299 53 - 1517660 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------ttgaattgaaaaaacat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514437 53 + 6513552 AATTATAAATCCATTCAAAATTCCTTCAAAAAA-ctt--------ttgaattgaaaaaacat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284482 53 + 117903854 AATTATAAATTCATTTAAAATTCGTTTAAAAAA-CTA--------TAGAATTAAAACAAAAt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472333 53 - 31320352 AATTATAAATTCATTTACAATTCCTTCaaaaaa-cta--------tagaattgaaacaaaat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667626 52 + 2203405 AATTATAAATTCATTTA-AATTCCTTCAAAAAA-CTA--------TAGAATTGAAAGAAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620176 53 - 14941987 AATTATAAATTCATTTAAAATTCCTTCaaaaaa-cta--------tagaattgaaataaaat i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41534448 52 + 83067054 AATTACAAATCCATTCAAAATTCTTCCAAAAAA-ctt--------tggagttggaaaaac-t i micMur3.chr19 I 34 C 0 s otoGar3.GL873546 11246105 52 - 20685099 AATCATAAACACATTCAAAATTTTTCTGAACACTCAT--------TAGAGTTGG-AAAAT-T i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112324956 53 - 122678785 AACTGTATATCCACTAAAAATTCCCCTgggatc-cct--------gggtggcgcagcggttt i canFam3.chr1 C 0 I 1148 s dasNov3.JH575754 499433 61 - 2150887 AATTACAAATATACTCAAAATTCTTTAAGAACA-TATTCCTtacatatacataagaatacat i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I a score=665323.000000 s hg38.chr18_GL383571v1_alt 151455 60 + 198278 gtgcctaaatcttggtcaaaccacttatcagctgatttgctttggacaaatcacttgaca s panTro5.chr18 65061477 55 + 78221452 gtgcctaaatcttggtcaaaccacttatcagctgatttgctttggacaaatcact----- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180543 55 + 77229886 gtgcctaaatcttggtcaaaccacttatcagctgatttgctttggacaaatcact----- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400018 60 + 17472758 gtgcctaaatcttggtcaaaccacttatcagctgatttgctttggacaaatcacttgaca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440502 60 - 152096393 gtgcctaaatcttggtcaagccacttatcagctgatttactttggacaaatcactggaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390547 60 + 70235451 atgcctaaatcttggtcaaaccacttaacagctgatttactttggacaaatcacttgaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63081957 60 - 75711847 atgcctaaatcttggtcaaaccacttaacagctgatttactttggacaaatcacttgaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641157 60 - 18804593 atgcctaaatcttggtcaaaccacttaacagctgatttactttggacaaatcacttgaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13252977 60 + 18905526 atgcctaaatcttggtcaaaccacttaacagctgatttactttggacaaatcacttgaca i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60081283 60 - 72318688 ATGCCTACatcttggtcaaaccacttaacagctgatttactttggacaaatcacttgaca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418352 60 - 1517660 atgcctaaatcttggtcaaaccacttaacagctgatttactttggacaaatcacttgaca i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3514490 60 + 6513552 gtgcctaaatcttggtcaaaccacttaaaagctgatttactttggacaaatcacttgaca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284535 60 + 117903854 gtgcccaaatcttgaccataccatttatcagctgatttactttggacaaatcacttgaAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472386 58 - 31320352 gtgcctaaatcttggccataccatttatcagctaatttactttggacaaatcacttg--a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667678 60 + 2203405 GTGCCTAaatcttggccataccatttatcagctgatttacttcggacaaatcacttgacg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620229 60 - 14941987 gtgcctaaatcttggccataccatttatcagctgatttactttggacaaatcacttaaca i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41534500 60 + 83067054 gggactaaatattggtcaaatcacttatcagtggatttactttggacaaagcacttgacA i micMur3.chr19 C 0 I 317 s otoGar3.GL873546 11246157 60 - 20685099 ATGACTATACATTGGTCAAATCACTCACCAGCTCATTTACTTTGGACTAATCACTTGTTT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 499494 42 - 2150887 atacatacatat------------------acatatgtacataggaatacatatattcca i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e canFam3.chr1 112325009 1148 - 122678785 I a score=934808.000000 s hg38.chr18_GL383571v1_alt 151515 95 + 198278 tgagtttcaa-acatatatg-taaaataactacttgatagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatgtgcagcaca------- s panTro5.chr18 65061532 95 + 78221452 tgagtttcaa-acatatatg-taaaataactacttgagagagttgttgtgaggattgtaac----gatacaca--aaaaccttatgattcaatgtgcagcaca------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180598 95 + 77229886 tgagtttcaa-acatatatg-taaaataactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatgtgcagcaca------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400078 95 + 17472758 tgagtttcaa-acatatatg-taaaataactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatgtgcagcaca------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440562 94 - 152096393 tgagtttcaa-acatatatg-taaaataactacttgagagagttgttgtgaggattgtaat----gata-aca--aaaaccttacgattcaatgtgcagcaca------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390607 95 + 70235451 tgagtttcaa-acatatatg-taaaacaactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatatgcagcaca------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082017 95 - 75711847 tgagtttcaa-acatatatg-taaaacaactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatatgcagcaca------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641217 95 - 18804593 tgagtttcaa-acatatatg-taaaacaactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaacttatgattcaatatgcagcaca------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253038 95 + 18905526 tgagtttcaa-acatatatg-taaaacaactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgatgcaatatgcagcaca------- i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60081343 95 - 72318688 tgagtttcaa-acatatatg-taaaacaactacttgagagagttgttgtgaggattgttat----gatacaca--aaaaccttacgattcaatatgcagcaca------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418413 95 - 1517660 tgagtttcaa-acatatatg-taaaacaactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatatgcagcaca------- i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3514550 95 + 6513552 tgagtttcaa-acatgtatg-taaaataactacttgagagagttgttgtgaggattgtaat----gatacaca--aaaaccttatgattcaatatgcagcaca------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284595 86 + 117903854 TGATTTTCAA-ACATGTATG-TAAAACACTAGATAG----AGCTGTT----GTATTGTAAT-----ATACATA--AAAACCTTATGATTCAATGTGCAGCACA------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472444 91 - 31320352 TGATTTTCAA-ACATGTATG-CGAaatagctactag----agttgttgtaagtattgtaat----gatacata--aaaaccttatgattcaatgtgcagcaca------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667738 91 + 2203405 tgattttcaa-acatgtagg-taaaataactactag----agttgttgtgagtattgtaat----gatacata--aaatccttatgattcaatgtgcagcaca------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620289 99 - 14941987 tgattttcaa-acatgtatg-taaaacaactactagagacagttgttgtgagtattgtaatgaatgatacata--aaaaccttatgattcaatgtgcagcaca------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11246217 98 - 20685099 TGTGTTTCAC-TCTTGTATGTTAAAAAAATAGCTTATAAAGGTTGTTCTAAGGATTGTGAA----GAGACACACCAAAATGTTATGATTCAAAATGTAGAAAA------- i otoGar3.GL873546 C 0 I 134 s dasNov3.JH575754 499536 91 - 2150887 tgtatatagatacatacatg-taTGAGGG------GGGGGTGATGTTGTGAAGACTTTGGT--GAGATATATA--TAAACTTTAAG--------TGCAGTTTATTATATC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e canFam3.chr1 112325009 1148 - 122678785 I a score=285220.000000 s hg38.chr18_GL383571v1_alt 151610 25 + 198278 tattaagtgattaattcatgacaga s panTro5.chr18 65061627 25 + 78221452 tattaagtgattaattcatgacaga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180693 25 + 77229886 tattaagtgattaattcatgacaga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400173 25 + 17472758 tattaagtgattaattcatgacaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440656 25 - 152096393 tattaagtgattaattcatgataga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390702 25 + 70235451 tattaagtgatcaattcatgataga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082112 25 - 75711847 tattaagtgatcaattaatgataga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641312 25 - 18804593 tattaagtgatcaattcatgataga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253133 25 + 18905526 tattaagtgatcaattcatgataga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081438 25 - 72318688 tattaagtgatcaattcatgataga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418508 25 - 1517660 tattaagtgatcaattcatgataga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514645 25 + 6513552 tattaagtgatcaattcatgataga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284681 25 + 117903854 TATTAAGTGATTAATTCATGACAGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472535 25 - 31320352 tattaagtgattaatTCATGATAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667829 25 + 2203405 tattaagtgattaattcatgacaga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620388 25 - 14941987 tattaagtgattaattcatgataga i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 499627 25 - 2150887 TGCTAAGTGATTAATTCTTGCTAGA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e canFam3.chr1 112325009 1148 - 122678785 I e otoGar3.GL873546 11246315 134 - 20685099 I a score=186631.000000 s hg38.chr18_GL383571v1_alt 151635 20 + 198278 -tcCTTATCCAAAGT-AAACCA s panTro5.chr18 65061652 20 + 78221452 -tcCTTATCCAAAGT-AAACCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180718 20 + 77229886 -tcCTTATCCAAAGT-AAACCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400198 20 + 17472758 -tcCTTATCCAAAGT-AAACCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440681 20 - 152096393 -tcCTTATCCAAAGT-AAACCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390727 20 + 70235451 -tcCTTATCCAGAGT-AAACCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082137 20 - 75711847 -tcCTTATCCAGAGT-AAACCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641337 20 - 18804593 -tcCTTATCCAGAGT-AAACCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253158 20 + 18905526 -tcCTTATCCAGAGT-AAACCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081463 20 - 72318688 -tcCTTATCCAGAGT-AAACCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418533 20 - 1517660 -tcCTTATCCAGAGT-AAACCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514670 20 + 6513552 -tcCTTATCCAAAGT-AAATCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284706 20 + 117903854 -TCCTTACCCAGTGC-AAACCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472560 21 - 31320352 TTCCTTACCCAATGT-AAACCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667854 20 + 2203405 -tcCTCACCCAATGT-AAAGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620413 21 - 14941987 -tcCTTACCCAATGTAAAACCA i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499652 0 - 2150887 C e canFam3.chr1 112325009 1148 - 122678785 I e otoGar3.GL873546 11246315 134 - 20685099 I a score=1137554.000000 s hg38.chr18_GL383571v1_alt 151655 109 + 198278 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTAAACAGCCCACATATTAATTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT s panTro5.chr18 65061672 101 + 78221452 ATTATTGACAATTCAGTCAACATTTAAACAGACAGTAAACAGCCCACATATTAATTGTCTTGATATC--------TTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180738 101 + 77229886 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTAAACAGCCCACATATTAATTGTCTTGATATC--------TTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400218 109 + 17472758 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTAAACAGCCCACATATTAATTGTCTTGATACCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440701 109 - 152096393 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTAAACAGCCCACATATTAATTGTCTTGATAGCTTAGAATGTTAGGGAACCTTACTTCTGGAAGCAGTGTTA---AAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390747 109 + 70235451 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082157 109 - 75711847 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641357 109 - 18804593 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253178 109 + 18905526 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081483 109 - 72318688 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418553 109 - 1517660 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTACAATGTTAGGGAACCTTGCCTCTGGAAGTAGTGTTA---AAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514690 109 + 6513552 ATTATTGACAATTCAGTCAACATTTAAACAGGCAGTTAACAGTCCACATGTTAACTGTCTTGATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA---AAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284726 110 + 117903854 ATTATTGACAATTCAGTCAACATTTAAGCAGGCAGTAAACAGACCACATATTAACTGTCTCAATATCTTAGAATGTTAGGGAGCCTTACCTCTGGAAGTAGTGTTA--TACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472581 110 - 31320352 ATTATTGACAATTCAGTCAACATTTAAGCAGGCAGTAAATAGATCACATATTAACTGTCTCAGTATCTTAGAATGTTAGGGAGCTTTACCTCTGGAAGTAGTGTTA--TAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667874 110 + 2203405 ATTATTGACAATTCAGTCAACATTTAAGCAGGCAGTAAATAGACCACATATTAACTGTCTCAATATCTTAGAATGTTAGGGAGCCTTGCCTCTGGAAGTAGTGTTA--TACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620434 110 - 14941987 ATTATTGACAATTCAGTCAACATTTAAGCAGGTAGTAAATAGACCACATATTAACTGTCTCAATATCTTAGAATGTTAGGGAACCTTACCTCTGGAAGTAGTGTTA--TACT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112326157 110 - 122678785 ATTAGGCACACTTTAGCC-ACATTTAAATAAGCAGTAAATAGTCCACATGTTAAATTCCTTGATATCTTCT-ATATGAGGCATCCTTACCTCTGGAAATGGTATTACATATT i canFam3.chr1 I 1148 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499652 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I a score=85866.000000 s hg38.chr18_GL383571v1_alt 151764 10 + 198278 CCCTTCTATT s panTro5.chr18 65061773 10 + 78221452 CCCTTCTATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180839 10 + 77229886 CCCTTCTATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400327 10 + 17472758 CCCTTCTATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440810 10 - 152096393 CCCTTCTATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390856 10 + 70235451 CTCTTCTATT i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63082266 10 - 75711847 CTCTTCTATT i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13641466 10 - 18804593 CTCTTCTATT i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13253287 10 + 18905526 CTCTTCTATT i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60081592 10 - 72318688 CTCTTCTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418662 10 - 1517660 CTCTTCTATT i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3514799 10 + 6513552 CTCTTCTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284836 10 + 117903854 GCTTTCtatt i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19472691 6 - 31320352 GCTATT---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1667984 10 + 2203405 GCTTTCTATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620544 10 - 14941987 GCTTTCTATT i aotNan1.NW_018502140v1 C 0 I 1 s canFam3.chr1 112326267 10 - 122678785 GCCTTCTACT i canFam3.chr1 C 0 T 970 s dasNov3.JH575754 499652 10 - 2150887 CTCTTCTCTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e otoGar3.GL873546 11246315 134 - 20685099 I a score=-2246.000000 s hg38.chr18_GL383571v1_alt 151774 1 + 198278 -A s colAng1.NW_012115433v1 3514809 1 + 6513552 -T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105284847 1 + 117903854 -a i calJac3.chr13 I 1 C 0 s cebCap1.NW_016107689v1 1667994 1 + 2203405 -A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620555 1 - 14941987 -A i aotNan1.NW_018502140v1 I 1 C 0 s dasNov3.JH575754 499662 1 - 2150887 T- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e canFam3.chr1 112326277 970 - 122678785 T e otoGar3.GL873546 11246315 134 - 20685099 I e saiBol1.JH378121 19472697 0 - 31320352 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e cerAty1.NW_012001075v1 13253297 1 + 18905526 I e macNem1.NW_012016688v1 13641476 1 - 18804593 I e macFas5.chr18 63082276 1 - 75711847 I e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=4526.000000 s hg38.chr18_GL383571v1_alt 151775 6 + 198278 AAAAAA- s macFas5.chr18 63082277 6 - 75711847 aaaaaa- i macFas5.chr18 I 1 C 0 s calJac3.chr13 105284848 5 + 117903854 -aaaaa- i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1667995 5 + 2203405 -AAAAA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620556 5 - 14941987 -AAAAA- i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 499663 6 - 2150887 -AAAAAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e canFam3.chr1 112326277 970 - 122678785 T e otoGar3.GL873546 11246315 134 - 20685099 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e cerAty1.NW_012001075v1 13253297 1 + 18905526 I e macNem1.NW_012016688v1 13641476 1 - 18804593 I e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=5460.000000 s hg38.chr18_GL383571v1_alt 151781 6 + 198278 AAAAAA s macFas5.chr18 63082283 6 - 75711847 aaaaaa i macFas5.chr18 C 0 C 0 s calJac3.chr13 105284853 6 + 117903854 aaaaaa i calJac3.chr13 C 0 I 207 s cebCap1.NW_016107689v1 1668000 6 + 2203405 AAAAAA i cebCap1.NW_016107689v1 C 0 I 39 s aotNan1.NW_018502140v1 3620561 6 - 14941987 AAAAAA i aotNan1.NW_018502140v1 C 0 I 40 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e canFam3.chr1 112326277 970 - 122678785 T e otoGar3.GL873546 11246315 134 - 20685099 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e cerAty1.NW_012001075v1 13253297 1 + 18905526 I e macNem1.NW_012016688v1 13641476 1 - 18804593 I e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=0.000000 s hg38.chr18_GL383571v1_alt 151787 3 + 198278 GCg e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e calJac3.chr13 105284859 207 + 117903854 I e dasNov3.JH575754 499669 0 - 2150887 C e canFam3.chr1 112326277 970 - 122678785 T e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e cerAty1.NW_012001075v1 13253297 1 + 18905526 I e macNem1.NW_012016688v1 13641476 1 - 18804593 I e macFas5.chr18 63082289 0 - 75711847 C e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=4102.000000 s hg38.chr18_GL383571v1_alt 151790 72 + 198278 gcgtgaacccgggaggcggagcttgcagtgagcc--gagatcccgccactgcac-tccagcctgggcgacagagc s calJac3.chr13 105285066 74 + 117903854 gcctgaacccaggaggtggaggttgcggtaagccgagagattccgccattgcacttccagcctgggtaac-gagc i calJac3.chr13 I 207 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e canFam3.chr1 112326277 970 - 122678785 T e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e cerAty1.NW_012001075v1 13253297 1 + 18905526 I e macNem1.NW_012016688v1 13641476 1 - 18804593 I e macFas5.chr18 63082289 0 - 75711847 C e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=2076.000000 s hg38.chr18_GL383571v1_alt 151862 17 + 198278 gagactccgtttcaaaa s macFas5.chr18 63082289 4 - 75711847 -------------aaaa i macFas5.chr18 C 0 C 0 s calJac3.chr13 105285140 17 + 117903854 gaaactccgtctcaaaa i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325307 17 - 122678785 GAGATTCATTTGCTAAA i canFam3.chr1 T 970 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e cerAty1.NW_012001075v1 13253297 1 + 18905526 I e macNem1.NW_012016688v1 13641476 1 - 18804593 I e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=-3431.000000 s hg38.chr18_GL383571v1_alt 151879 5 + 198278 ----------aaaaa s macFas5.chr18 63082293 2 - 75711847 -------------aa i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13253298 5 + 18905526 ----------aaaaa i cerAty1.NW_012001075v1 I 1 C 0 s calJac3.chr13 105285157 4 + 117903854 -----------aaaa i calJac3.chr13 C 0 I 1 s canFam3.chr1 112325324 13 - 122678785 GACCCTTCtttaa-- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e manLeu1.NW_012106698v1 418672 1 - 1517660 I e chlSab2.chr18 60081602 0 - 72318688 C e macNem1.NW_012016688v1 13641476 1 - 18804593 I e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=1365.000000 s hg38.chr18_GL383571v1_alt 151884 1 + 198278 a s macFas5.chr18 63082295 1 - 75711847 a i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13253303 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 418673 1 - 1517660 a i manLeu1.NW_012106698v1 I 1 C 0 s calJac3.chr13 105285162 1 + 117903854 a i calJac3.chr13 I 1 C 0 s canFam3.chr1 112325337 1 - 122678785 a i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e chlSab2.chr18 60081602 0 - 72318688 C e macNem1.NW_012016688v1 13641476 1 - 18804593 I e rheMac8.chr18 57390866 1 + 70235451 I e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=2730.000000 s hg38.chr18_GL383571v1_alt 151885 2 + 198278 aa s rheMac8.chr18 57390867 2 + 70235451 aa i rheMac8.chr18 I 1 C 0 s cerAty1.NW_012001075v1 13253304 2 + 18905526 aa i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 418674 2 - 1517660 aa i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105285163 2 + 117903854 aa i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325338 2 - 122678785 aa i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e chlSab2.chr18 60081602 0 - 72318688 C e macNem1.NW_012016688v1 13641476 1 - 18804593 I e macFas5.chr18 63082296 0 - 75711847 C e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=12355.000000 s hg38.chr18_GL383571v1_alt 151887 6 + 198278 aaaaaa s rheMac8.chr18 57390869 6 + 70235451 aaaaaa i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641477 6 - 18804593 aaaaaa i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13253306 6 + 18905526 aaaaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081602 6 - 72318688 aaaaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418676 6 - 1517660 aaaaaa i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105285165 6 + 117903854 aaacaa i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325340 6 - 122678785 aataaa i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e macFas5.chr18 63082296 0 - 75711847 C e nomLeu3.chr4 139440820 0 - 152096393 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=3276.000000 s hg38.chr18_GL383571v1_alt 151893 1 + 198278 a s nomLeu3.chr4 139440820 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390875 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641483 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253312 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081608 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418682 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105285171 1 + 117903854 a i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325346 1 - 122678785 a i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e macFas5.chr18 63082296 0 - 75711847 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panPan2.chr18 64180849 0 + 77229886 C e panTro5.chr18 65061783 0 + 78221452 C a score=-864.000000 s hg38.chr18_GL383571v1_alt 151894 1 + 198278 -a s panPan2.chr18 64180849 1 + 77229886 -A i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139440821 1 - 152096393 -A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390876 1 + 70235451 -a i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641484 1 - 18804593 -a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253313 1 + 18905526 -a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081609 1 - 72318688 -a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418683 1 - 1517660 -a i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105285172 1 + 117903854 -a i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325347 1 - 122678785 t- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e macFas5.chr18 63082296 0 - 75711847 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C e panTro5.chr18 65061783 0 + 78221452 C a score=5005.000000 s hg38.chr18_GL383571v1_alt 151895 1 + 198278 a s panTro5.chr18 65061783 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180850 1 + 77229886 A i panPan2.chr18 C 0 C 0 s nomLeu3.chr4 139440822 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390877 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641485 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253314 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081610 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418684 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105285173 1 + 117903854 a i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325348 1 - 122678785 a i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e macFas5.chr18 63082296 0 - 75711847 C e gorGor5.CYUI01014964v1 5400337 0 + 17472758 C a score=6006.000000 s hg38.chr18_GL383571v1_alt 151896 1 + 198278 a s panTro5.chr18 65061784 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180851 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400337 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440823 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390878 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641486 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253315 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081611 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418685 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105285174 1 + 117903854 a i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325349 1 - 122678785 a i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e colAng1.NW_012115433v1 3514810 0 + 6513552 C e macFas5.chr18 63082296 0 - 75711847 C a score=12744.000000 s hg38.chr18_GL383571v1_alt 151897 2 + 198278 aa s panTro5.chr18 65061785 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180852 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400338 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440824 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390879 2 + 70235451 aa i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641487 2 - 18804593 aa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253316 2 + 18905526 aa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081612 2 - 72318688 aa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418686 2 - 1517660 aa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514810 2 + 6513552 AA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285175 1 + 117903854 -a i calJac3.chr13 C 0 C 0 s canFam3.chr1 112325350 2 - 122678785 aa i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472697 0 - 31320352 C e macFas5.chr18 63082296 0 - 75711847 C a score=14196.000000 s hg38.chr18_GL383571v1_alt 151899 2 + 198278 aa s panTro5.chr18 65061787 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180854 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400340 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440826 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390881 2 + 70235451 aa i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641489 2 - 18804593 aa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253318 2 + 18905526 aa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081614 2 - 72318688 aa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418688 2 - 1517660 aa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514812 2 + 6513552 AA i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19472697 2 - 31320352 AA i saiBol1.JH378121 C 0 C 0 s canFam3.chr1 112325352 2 - 122678785 aa i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e calJac3.chr13 105285176 0 + 117903854 C e dasNov3.JH575754 499669 0 - 2150887 C e otoGar3.GL873546 11246315 134 - 20685099 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e macFas5.chr18 63082296 0 - 75711847 C a score=112397.000000 s hg38.chr18_GL383571v1_alt 151901 16 + 198278 aaaaaaGCATCTTCAA s panTro5.chr18 65061789 16 + 78221452 AAAAAAGCATCTTCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180856 16 + 77229886 AAAAAAGCATCTTCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400342 16 + 17472758 AAAAAAGCATCTTCAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440828 16 - 152096393 AAAAAAGCATCTTCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390883 16 + 70235451 aaaaaGGCATCTTCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082296 13 - 75711847 ---aaGGCATCATCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641491 16 - 18804593 aaaaaGGCATCTTCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253320 16 + 18905526 aaaaaGGCATCTTCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081616 16 - 72318688 aaaaaGGCATCTTCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418690 16 - 1517660 aaaaaGGCATCTTCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514814 16 + 6513552 AAAAAGGCATCTTCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285176 9 + 117903854 ------GC-TCTTCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472699 16 - 31320352 AAAAAAGCATCTTCAA i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11246449 16 - 20685099 AAAAAAATGTCTTCAC i otoGar3.GL873546 I 134 C 0 s canFam3.chr1 112325354 11 - 122678785 taaaaaGTTCC----- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e dasNov3.JH575754 499669 0 - 2150887 C e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I a score=240946.000000 s hg38.chr18_GL383571v1_alt 151917 36 + 198278 TGTGCTAACCTTGTACATCACTTTAGTGATGTATAC s panTro5.chr18 65061805 36 + 78221452 TGTGCTAACCTTGTACATCACTTTAGTGATGTATAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180872 36 + 77229886 TGTGCTAACCTTGTACATCACTTTAGTGATGTATAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400358 35 + 17472758 TGTGCTAACCTTGTACATCA-TTTAGTGATGTATAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440844 36 - 152096393 TGTGCTAACCTTGTGCATCACTTTAGTGATGTATAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390899 36 + 70235451 TGTGCTAACCTTGTGCATCACTTTAGTGATGTATAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082309 36 - 75711847 TGTGCTAACCTTGTGCATCACTTTAGTGATGTATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641507 36 - 18804593 TGTGCTAACCTTGTGCATCACTTTAGTGATGTATAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253336 36 + 18905526 TGTGCTAACCTTGTGCATCACTTTAGTGATGCATAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081632 36 - 72318688 TGTGCTAACCTTGTGCATCACTTTAGTGATGTATAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418706 36 - 1517660 TGTGCTAACCTTGTGCATCACTTTAGTGATGCATAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514830 36 + 6513552 TGTGCTAACCTTGTGCATCACTTTAGTGATGTATAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285185 27 + 117903854 TATGCTAACCT--TACATCACTTTAGTGC------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472715 22 - 31320352 TATGCTA-------ACATCACTTTAGTAC------- i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11246465 34 - 20685099 TGTGCCAACTCTGTGCATTACCT--GCTTAGAATGC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112325365 31 - 122678785 -ATGCCAGTCCTGTGCACCAAACTCAAAATGT---- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499669 31 - 2150887 TGTTCTAACCCC-TACACCACCTATATTGTGT---- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e mm10.chr1 111855018 419 + 195471971 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I a score=56908.000000 s hg38.chr18_GL383571v1_alt 151953 7 + 198278 CTCAAGT s panTro5.chr18 65061841 7 + 78221452 CTCAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180908 7 + 77229886 CTCAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400393 7 + 17472758 CTCAAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440880 7 - 152096393 CTCAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390935 7 + 70235451 CTCAAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082345 7 - 75711847 CTCAAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641543 7 - 18804593 CTCAAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253372 7 + 18905526 CTCAAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081668 7 - 72318688 CTCAAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418742 7 - 1517660 CTCAAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514866 7 + 6513552 CTCAAGT i colAng1.NW_012115433v1 C 0 C 0 s otoGar3.GL873546 11246499 7 - 20685099 CTGAAGA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111855437 7 + 195471971 CTCATGT i mm10.chr1 I 419 C 0 s canFam3.chr1 112325396 7 - 122678785 CTCAGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499700 6 - 2150887 CTCAAG- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41534560 317 + 83067054 I e proCoq1.NW_012148742v1 1274501 492 - 1406956 I e calJac3.chr13 105285212 0 + 117903854 C e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472737 0 - 31320352 C a score=107609.000000 s hg38.chr18_GL383571v1_alt 151960 11 + 198278 AACTTGCAAGA s panTro5.chr18 65061848 11 + 78221452 AACTTGCAAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180915 11 + 77229886 AACTTGCAAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400400 11 + 17472758 AACTTGCAAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440887 11 - 152096393 AACTTGCAAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390942 11 + 70235451 AACTTGCAAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082352 11 - 75711847 AACTTGCAAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641550 11 - 18804593 AACTTGCAAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253379 11 + 18905526 AACTTGCAAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081675 11 - 72318688 AACTTGCAAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418749 11 - 1517660 AACTTGCAAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514873 11 + 6513552 AACTTGCAAGA i colAng1.NW_012115433v1 C 0 C 0 s micMur3.chr19 41534877 11 + 83067054 AACTTGCAAGA i micMur3.chr19 I 317 C 0 s proCoq1.NW_012148742v1 1274993 11 - 1406956 AACTTGCAAGA i proCoq1.NW_012148742v1 I 492 C 0 s otoGar3.GL873546 11246506 11 - 20685099 AATCTGCTAGA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111855444 10 + 195471971 AAGTTGCAAG- i mm10.chr1 C 0 C 0 s canFam3.chr1 112325403 2 - 122678785 AA--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 499706 11 - 2150887 AACCTGTAAGA i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105285212 0 + 117903854 C e aotNan1.NW_018502140v1 3620567 40 - 14941987 I e cebCap1.NW_016107689v1 1668006 39 + 2203405 I e saiBol1.JH378121 19472737 0 - 31320352 C a score=1870629.000000 s hg38.chr18_GL383571v1_alt 151971 136 + 198278 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACTAGCAGCAGGAAG-GGCA-GATGTAGA-----ATACAGATTCTTAATACAGGTACATC-CTTGCCATTTAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- s panTro5.chr18 65061859 136 + 78221452 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTAGCAGGAGG-GGCA-GATGTAGA-----ATACAGATTCTTGATACAGGTACATC-CTTGCCATTTAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64180926 136 + 77229886 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTAGCAGGAGG-GGCA-GATGTAGA-----ATACAGATTCTTGATACAGGTACATC-CTTGCCATTTAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400411 136 + 17472758 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTAGCAGGACG-GGCA-GATGTAGA-----ATACAGATTCTTGATACAGGTACATC-CTTGCCATTTAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139440898 128 - 152096393 AGTTTCTTC-TTT--TAGTGATATCATGCC----TAAAG-ATCTT-ACCAGTAGCAGGAGG-GGCA-GATGTAGA-----ATACG----TTTGATACAGGTACATC-CTTGCCATTTAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57390953 136 + 70235451 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTACCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082363 136 - 75711847 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTACCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641561 136 - 18804593 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTACCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253390 136 + 18905526 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTACCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081686 136 - 72318688 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTACCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTG- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418760 136 - 1517660 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTACCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3514884 136 + 6513552 AGTTTCTTC-TTT--TAGTGATATCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGGAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-ATTGCCATTTAGAAAGTTGC--AGTCAGGGCCTGGAATTAAGTT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285212 136 + 117903854 AGTTTCTTC-TTT--TAGTGATACCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGCAGG-GACA-GACGTAGA-----ATACAGATGCTTGATACAGGTACATC-CCCGCCATTTAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472737 136 - 31320352 AGTTTCTTC-TTT--TAGTGATACCATGCCTGAATGAAG-ATCTT-ACCAGTAGCAGCAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-CTCGCCATTTAGAAAGTTGC--AGTCAGAACCTGGAATTAAGTC- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668045 136 + 2203405 AGTTTCTTC-TTT--TAGTGATACCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGTAGG-GGCA-GATGCAGA-----ATACAGGTGCTTGGTACAGGTACATC-CTCGCCATTAAGAAAGTTGC--AGTCAGGACCTGGAATTAAGTT- i cebCap1.NW_016107689v1 I 39 C 0 s aotNan1.NW_018502140v1 3620607 136 - 14941987 AGTTTCTTC-TTT--TAGTGATACCATGCCTGAATGAAG-ATCTT-ACCAGTGGCAGTAGG-GGCA-GATGTAGA-----ATACAGATGCTTGATACAGGTACATC-CTCGCCATTTAGAAAGTTGC--CGTCAGGACCTGGAATTAAGTT- i aotNan1.NW_018502140v1 I 40 C 0 s micMur3.chr19 41534888 139 + 83067054 AGTTTCCTCCTTT--TCATCATATCATGACTAAATGAAG-AACTT-ACCAGTGGCAGTAGA-GGCA-TATGTAGA-----ATACAGGCTCTTAGTACAAGCATATT-CTTGTCATTTAGAAAGTTGTAGAGTCAAGACTTGGAATTAAGTT- i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1275004 139 - 1406956 AGTTTCTTCCTTT--TCATCATATCATGACTGAATGAAG-AACTT-ACCAGTGGCAGGAGA-GGCA-TATGTAGA-----ACACAGGTTCTTAGTACAAGCATATC-CTTGTCATTTAGAAAGTTGTAGAGTCAGGACTTGGAATTAAGTT- i proCoq1.NW_012148742v1 C 0 I 80 s otoGar3.GL873546 11246517 121 - 20685099 AGTTTCTTCTTTT--CAGCCATATCAAGACCAAACGAAGCAACTTAACCAG---------------------AGT-----ACACAGGTTATTAGTATAGACATATC-CTGGTCA-TTAGAAAGCTTCAGAGTCAGGACGTGAAACTAAATT- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111855454 132 + 195471971 -GTTTCTTC---T--TAGT--TATTATTCCTAAATGAA--ATCTT-ACT-GTGGTGGTTGGTGGTAGGACATTGA-----GCACACATGAGCATTACAGATCTATCTTTTACTATTT--AAGGTCACAGAGCCAGATCTTAGAACAAAGTT- i mm10.chr1 C 0 I 1 s canFam3.chr1 112325405 118 - 122678785 --TCTTTTT-CAT--GAGTAACAT-ATG-CAGCATGAAG-ATCTT-ACCAATAGCAGCAGG-GACA-AATGTAGA-----GCACAGGTGCATAGTACAGGGATACT-CTTGCCATTTAGTAA----------------CTGGGGTGATGTA- i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 499717 132 - 2150887 AGTTTCTTT-TTTCCTAGCGATATCCAGCCTGCATG----ACTTT-ACCAGTGGCAAGAGG-GA-A-GATGCAGAGCCCCATATAGA------ATATGGGGACATC-CATGACATTTATAACGTCAG--AGTGATGCACTGAGA--AGACTA i dasNov3.JH575754 C 0 C 0 a score=15561.000000 s hg38.chr18_GL383571v1_alt 152107 1 + 198278 A s panTro5.chr18 65061995 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181062 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400547 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441026 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391089 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082499 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641697 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253526 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081822 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418896 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515020 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285348 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472873 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668181 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620743 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535027 1 + 83067054 A i micMur3.chr19 C 0 I 100 s otoGar3.GL873546 11246638 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 499849 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111855586 1 + 195471971 I e proCoq1.NW_012148742v1 1275143 80 - 1406956 I e canFam3.chr1 112325523 3 - 122678785 I a score=761231.000000 s hg38.chr18_GL383571v1_alt 152108 80 + 198278 GGGGAACAGAGACTCG---AGAGTCAGGGGTTG--GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTCTGGGTTTGGGG s panTro5.chr18 65061996 80 + 78221452 GGGGAACAGAGACTCG---AGAGTCAGGGGTTG--GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTCTGGGTTTGGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181063 80 + 77229886 GGGGAACAGAGACTCG---AGAGTCAGGGGTTG--GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTCTGGGTTTGGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400548 79 + 17472758 GGGGAACAGAGACTCG---AGAGTCA-GGGTTG--GGGGAGGTGG-----------------AGAAG-----------------------------GACGAAGTTCAGTTGCTAAAATTCTGGGTTTGGGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441027 80 - 152096393 GGGGAACAGAGACACG---AGAGTCGGGGGTTG--GGGGAGGTGA-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGGTTTGGGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391090 79 + 70235451 GGGGAACAGAGACACA---AGAGTCAGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGATTTGGGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082500 79 - 75711847 GGGGAACAGAGACACA---AGAGTCAGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGATTTGGGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641698 79 - 18804593 GGGGAACAGAGACACA---AGAGTCAGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGATTTGGGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253527 79 + 18905526 GGGGAACAGAGACACA---AGAGTCGGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGATTTGGGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081823 78 - 72318688 GGGGAACAGAGACAC----AGAGTCGGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGATTTGGGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418897 79 - 1517660 GGGGAACAGAGATACA---AGAGTCGGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGATTTGGGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515021 79 + 6513552 GCGGAACAGAGACAAA---AGAGTCGGGGGTT---GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGTTCAGTTGCTAAAATTGTGGGTTTGGGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285349 80 + 117903854 GGGGAACAGAGGCACG---AGAATCGGAGGTTG--GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGCTCAGTTGCTAAAATTGTGGCTTTCGGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472874 80 - 31320352 GGGGAACAGAGGCACG---AGAATTGGAGGTTG--GAGGAGGTGG-----------------AGAAG-----------------------------GACCAAGCTCAGTTGCTAAAATTGTGGATTTGGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668182 80 + 2203405 GGGGAACAGACGCACG---AGAATCGGAGGTTG--GGGGAGGTGG-----------------AGAAG-----------------------------GACCAAGCTCAGTTGCTAAAATTGTGGCTTTGGGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620744 80 - 14941987 GGGGAACAGAGGCACG---AGAATCGGAGGTTT--GGGGAGGTGG-----------------AGAAG-----------------------------CACCAAGCTCAGTTGCTAAAATTGTGGCTTTGGGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11246639 78 - 20685099 TAGGAACAGAGACAAG---AATTGCCTAACTT----GGGAGGAAA-----------------GGGGT-----------------------------ACTCAAGTTTAGCAGCCAAAATTGTGGGACTGGTT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111855587 72 + 195471971 CCAGTGCAGAAGGAGG---ATTGCCCTTCGCT-----GAAGTTGG-----------------AGGAT-----------------------------CTTC--TCTTAGATG---AACTTGTAGAAATGAGC i mm10.chr1 I 1 C 0 s canFam3.chr1 112325526 92 - 122678785 AGAATGCAATGAGTC----AAAGTCAGAGATA------GAGCTGGGATTAAGTACCGTCACTGAAAG-----------------------------GTACAAGTTTTGTGGCTGAAATTCTGAGGCTGAAT i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 499850 114 - 2150887 AATGGACTGAATCCAGGTCAGAGACAGGACTTGGCAGAGAGATGG-----------------GGAAGCTGAGACCAGACTCCTTCATCAACAGGGAGTGCAAGGTTAGTGACTGAAATTGTCAGACAGGGT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41535028 100 + 83067054 I e proCoq1.NW_012148742v1 1275143 80 - 1406956 I a score=2655722.000000 s hg38.chr18_GL383571v1_alt 152188 174 + 198278 ATCGGTATTCAACTTGTCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAATAGCATTACTCAAAGACCTA-GGGAAAAGGGGTAAG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTACACATA-- s panTro5.chr18 65062076 174 + 78221452 ATCGGTATTCAACTTGTCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAATAGCATTACTCAAAGACCTA-GGGAAAAGGGGTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTACATATA-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181143 174 + 77229886 ATCGGTATTCAACTTGTCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAATAGCATTACTCAAAGACCTA-GGGAAAAGGGGTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTACATATA-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400627 174 + 17472758 ATCGGTATTCAACTTGTCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAATAGCATTACTCAAAGACCTA-GGGAAAAGGGGTATG-ATAAAATTATCCCAATCAC-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTACACATA-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441107 174 - 152096393 ATCGGTATTCAACTTGTCTTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAAGAGCATTACTCAAAGACCTA-GGGAAAAGGGGTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACACA-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391169 174 + 70235451 ATCAGTATTCAGTCTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCGTTACTCAAAGACCTA-AGGAAAAGGGTTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082579 174 - 75711847 ATCAGTATTCAGTCTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCGTTACTCAAAGACCTA-AGGAAAAGGGTTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641777 174 - 18804593 ATCAGTATTCAGTCTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCGTTACTCAAAGACCTA-AGGAAAAGGGTTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253606 174 + 18905526 ATCAGTATTCAGTCTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCGTTACTCAAAGACCTA-AGGAACAGGGTTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60081901 175 - 72318688 ATCAGTATTCAGTCTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCGTTACTCAAAGACCTA-AGGAAAAGGGTTATG-ATAAAATTATCCCAATCATAAGACAAGTTGCTTTTAGTTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 418976 174 - 1517660 ATCAGTATTCAGTCTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCATTACTCAAAGACCTA-AGGAAAAGGGTTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515100 174 + 6513552 ATCGATATTCAGTTTGCCCTGCATTTTCCAACTGCTGGTTCCTCAGCTCCATACAAAATCTTAACAGCATTACTCAAAGACCTA-AGGAAAAGGGTTATG-ATAAAATTATCCCAATCAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285429 174 + 117903854 AACAGTATTCAACTTGTCCTCCATTTTCCAACTGCTGGTTCCTCGGCTCCATACAAAATCCTAACAGCATTACCCAAAGATCTA-AGGAAAAGGGGTATG-ATAAAATTATCCCAATAAT-AGACAAGTTGTTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19472954 170 - 31320352 AACAGTATTCAATTTGTCCTCCATTTTCCAACTGCTGGTTCCTCGGCTCCATACAAAATCCTAACAGCATTACCCAAAGACCTA-AGGAAAAGGGGTATG-ATAAAATTATCCCAATAAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATT-AC--------------AGGAGTC---TTATACATA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668262 174 + 2203405 AACAGTATTCAACTTGTCCTCCATTTTCCAACTGCTGGTTCCTGGGCTCCATACAAAATCCTAACAGCATTACCCAAAGACCTA-AGGAAAAGGGGTATG-ATAAAATTATCCCAATAAT-AGTCAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620824 174 - 14941987 AACAGTATTCAACTTGTCCTCCATTTTCCAACTGCTGGTTCCTCGGCTCCATACAAAATCCTAACAGTATTACCCAAAGACCTA-AGGAAAAGGGGTATG-ATAAAATTATCCCAATAAT-AGACAAGTTGCTTTTAGCTTTTTATTT--TTGTATTAAC--------------AGGAGTCTTATTATACATA-- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535128 176 + 83067054 ATCAGTATTCAACTTGTCCTTCATTTTCCAACTTCTACTTCCTCAGCTCCATACAAAATCCTAACACCATTACACAAAGAACTA-AAGAAGCGTGGTATG-CCAAAATTATCTCAATCAT-AGTCAAGTTACTTTTAGTTTTTTATTT--TTGGATTAAC------------AGAGGAGTCTTATTATACATA-- i micMur3.chr19 I 100 C 0 s proCoq1.NW_012148742v1 1275223 173 - 1406956 ATCAGTATTCAACTCGTCCTTCATTTTCCAACTTCTACTTCCTCAGCTCCATACAAAATCCTAACACCATTATCCAAAGAACTA----AAGTGGGGTATG-GCAAAATCATCTTAATCAT-AGCCAAGTTACTTTTAGCTTTTTATGT--TTGTATTAAC------------AGAGGAATCTTATTATACATA-- i proCoq1.NW_012148742v1 I 80 I 135 s otoGar3.GL873546 11246717 176 - 20685099 ATCAGTATTCAACCTG-CCATCAGCTTCCAACTTCTCCTTCCCCAGCTCCATAAAAAATCCTAACACCATGACCCAAAGACCTAAAAAAAAGGGAGTATG-GCAAAATTATCCCAATCAT-AGCCAAGTTGCTTTTAGTTTTTTATTT--TTGTATTAAC------------AGAGGAATCTTACTGTACACA-- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111855659 148 + 195471971 ACTAATATTAAATATA-ACTGCATTCTCCAACTTGGATTTATTTAGTAGCACACAAATTGACAGTGCTATAACCCAAAGACCTA----AAGAGGTGCTTG-ACAAAATTATTCCAACCAT-AGCCAAACTGACTTT------------------ATTAAG------------CAGGGAATCTTCT---------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112325618 164 - 122678785 TTCAATATTCAATGTGCCCCG---TTTCAAGTCCCTGCCTTCTCAGCTCCACATAAAATCCTCGCAG--TCACCCAAAGATCTA----AAGAGAGTTATT-AGAAAATTATCCCGACCAT-AGCCAAGTTGCCTTTAGCTTTTCATTTACTCGTAG------------------TGGAGTCTTGTTATACACA-- i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 499964 191 - 2150887 GTCAGTATTCAGCTTGTCCTGCATTTCCCAACTTCTGCCTTCTCAGAGCTATACAAACGTGTAACACCATCACTCAAAGACCTA-AGGAACAGGTGTGTGAAAAAAATCATCCCAAACAT-AACCAAGTTGCTTTTAGCTTCTTTTTA--TTTACTTACCATTTTAAGTAATAGAGGAGTCTGGCTACATGTACA i dasNov3.JH575754 C 0 C 0 a score=617473.000000 s hg38.chr18_GL383571v1_alt 152362 57 + 198278 GGTCTGATAAAACTGG-----------------TTTATGATCTTCAGTCTG---T-TTCC----AGTGCTGCAT-AACTAGAT s panTro5.chr18 65062250 57 + 78221452 GGTCTGATAAAACTGG-----------------TTTATGATCTTCAATCTG---T-TTCC----AGTGCTGCAT-AACTAGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181317 57 + 77229886 GGTCTGATAAAACTGG-----------------TTTATGATCTTCAATCTG---T-TTCC----AGTGCTGCAT-AACTAGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400801 57 + 17472758 GGTCTGATAAAACTGG-----------------TTTATGATCTTCAGTCTG---T-TTCC----AGTGCTGCAT-AACTAGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441281 57 - 152096393 GGTCTGATAAAACTGG-----------------TTTATGATCTTCAGTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391343 57 + 70235451 GGTCTGATAAAACCGG-----------------TTTACGATCTTCACTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082753 57 - 75711847 GGTCTGATAAAACCGG-----------------TTTACGATCTTCACTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13641951 57 - 18804593 GGTCTGATAAAACCGG-----------------TTTACGATCTTCACTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253780 57 + 18905526 GGTCTGATAAAACCGG-----------------TTTACGATCTTCACTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082076 57 - 72318688 GGTCTGATAAAACCGG-----------------TTTACGATCTTCACTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419150 57 - 1517660 GGTCTGATAAAACCGG-----------------TTTACGATCTTCACTCTG---T-TTCC----AGTGCTGCAT-AACTGGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515274 57 + 6513552 GGTCTGATAAAACCAG-----------------TTTACGATCTTCACTCCG---T-TTCC----AGTGCTGCAT-AACTGGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285603 75 + 117903854 GGTCTGATAAACTTATGATTTTCAGTCACAAACTTTATGATCCTCAGTCTG---T-TTCC----AGTGCTGCATTAACTGGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473124 79 - 31320352 GGTCTGATAAACTTATGCTTTTCAGTCATAAACTTTATGATCTTCAGTCTG---T-TTCCAGTGAGTGCTGCATTAACTGGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668436 75 + 2203405 GGTCTGATAAACTTACGATTTTCAGTCATAAACTTTATGATCTTCAGTCTG---T-TTCC----GGTGCTGCATGAACTGGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3620998 75 - 14941987 GGTCTGATAAACTTATGATTTTCAGTCATAAACTTTATGATCTTCAGTCTA---T-TTCC----AGTGCTGCATTAACTGGAT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535304 53 + 83067054 ---TGTATAAA-CTAG-----------------TTTATGATCTTCAGTATG---T-TTTC----TTTGCTGCAT-AACCAGAT i micMur3.chr19 C 0 I 24 s otoGar3.GL873546 11246893 58 - 20685099 -GTCTCATAAA-CTAG-----------------TTTATAATCGTCACACTATCTT-TTTC----TTTGTTGAAT-AACTGGAT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111855807 39 + 195471971 ---------------G-----------------TTTATGATCATTGTTTTC---T-TTCC----TAAGC---AC-ACCAAGAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112325784 57 - 122678785 GTTCCAATACG-CTAG-----------------TTTATGATC-TCAGTCTATC-T-TTTC----TTCACTGAAT-AATTGGGT i canFam3.chr1 I 2 I 1 s dasNov3.JH575754 500155 57 - 2150887 GAGCCAATAAAGTTG------------------TTTATGATCTCTGCTCTG---TGTTCC----TTTGCTGCAT-AACTGGAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1275396 135 - 1406956 I a score=179891.000000 s hg38.chr18_GL383571v1_alt 152419 22 + 198278 AACGTATGAAGGAAAAACGACG s panTro5.chr18 65062307 22 + 78221452 AATGTATGAAGGAAAAACGACG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181374 22 + 77229886 AATGTATGAAGGAAAAACGACG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400858 22 + 17472758 AACGCATGAAGGAAAAACGATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441338 22 - 152096393 AATGTATGAAGGAAAAACGACG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391400 22 + 70235451 AATGTGTGAAGGAAAAACGACG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082810 22 - 75711847 AATGTGTGAAGGAAAAACAACG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642008 22 - 18804593 AATGTGTGAAGGAAAAACAACG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253837 22 + 18905526 AATGTGTGAAGGAAAAACAACG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082133 22 - 72318688 AATGTGTGAAGGAAAAACAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419207 22 - 1517660 AATGTGTGAAGGAAAAACAACG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515331 22 + 6513552 AATGTGTGAAGGAAAAACAACG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285678 22 + 117903854 GGAGTGTGGAGCAAAAACGACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473203 22 - 31320352 AGCGTGTGACGTGAAAACGACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668511 22 + 2203405 AGCGTATGATGCGAAAACGACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621073 22 - 14941987 AGCATGTGAAACGAAAATGACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11246951 22 - 20685099 AAGATGTGAAAGAAACAAAATA i otoGar3.GL873546 C 0 I 3 s mm10.chr1 111855846 15 + 195471971 GGGGCAGGGGGCAGA------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112325842 21 - 122678785 AGTGTGAAAAACAAAACAAAC- i canFam3.chr1 I 1 I 3 s dasNov3.JH575754 500212 19 - 2150887 AAAGTGTAAAGAAACAAAA--- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41535357 24 + 83067054 I e proCoq1.NW_012148742v1 1275396 135 - 1406956 I a score=579288.000000 s hg38.chr18_GL383571v1_alt 152441 53 + 198278 ACGAAC-AAAAA-ATTAATTGCTTGGAAGACTTAGTTGAATCTATCCATGAAAAC s panTro5.chr18 65062329 53 + 78221452 ACGAAC-AAAAA-TCCAATTGCTTGGAAGACTTAGTTGAATCTATCCATGAAAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181396 53 + 77229886 ACGAAC-AAAAA-ACCAATTGCTTGGAAGACTTAGTTGAATCTATCCATGAAAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400880 52 + 17472758 ACGAAC-AAAAA-ACTAA-TGCTTGGAAGACTTAGTTCAATCTATCCATGAAAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441360 54 - 152096393 ATGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391422 54 + 70235451 ACGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082832 54 - 75711847 ACGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642030 54 - 18804593 ACGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253859 54 + 18905526 ACGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082155 54 - 72318688 ACGAACAAAAAA-ACTAATTGCTTGGAAGATTTAGCTGAATCTATCCATGAAAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419229 54 - 1517660 ACGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515353 54 + 6513552 ACGAACAAAAAA-ACTAATTGCTTGGAAGACTTAGCTGAATCTATCCATGAAAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285700 55 + 117903854 ACAAACAAAAATTACTAATTGCTTGGAAGACCTAGCTGAATCTGTCTTTGAAAAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473225 55 - 31320352 ACAAACAAAAACTACTAATTGCTTGGAAGACCTAGCTGAATCTGTCTTTGAAAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668533 55 + 2203405 ACAAACAAAAACTACTAATTGCTTGGAAGACCTAGCTGAATCTGTCTTTGAAAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621095 55 - 14941987 ACAAACAAAAACTAATAATTGCTTGGAAGACCTAGCTGAATCTGTCTTTGAAAAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535381 54 + 83067054 aaaaacaaaaaa-CTTCATGGTTTGGAAAACTTAGCTGAACCTACCTTTTGAAGA i micMur3.chr19 I 24 I 1 s otoGar3.GL873546 11246976 54 - 20685099 ATAATCAAAATC-CTTCACGTTTTGTTAAACTTAGCTGAGGCTATCTTTAGAAAT i otoGar3.GL873546 I 3 C 0 s mm10.chr1 111855861 32 + 195471971 ----------------------TTTACAGACCTCAATGAGTGTG-CTTTGATAAT i mm10.chr1 C 0 C 0 s canFam3.chr1 112325866 54 - 122678785 AAAAATGAAACC-CTCTATCGTTTGGAAGCCTTAGCTGAACCTATCTTTGGAAAC i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 500231 47 - 2150887 CTAAACAAAAAG-ACCTATGCTTTGG-------GTCTGAATCTATCTTTGTAAGG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1275396 135 - 1406956 I a score=2425397.000000 s hg38.chr18_GL383571v1_alt 152494 182 + 198278 AGAATCAA-TT----AAACATGTATGTGTTACTTAGACTAAATATAAA--TAACCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--GAAGTGTCTATTGTACTCTATGCAAAAATCCAAAGTCATTTGCGTCTTTAAAAATGATATGGATAATTTTTCTTC s panTro5.chr18 65062382 182 + 78221452 AGAATCAA-TT----AAACATGTATGTGTTACTTAGACTAAATATAAA--TAACCCATGTAAATG-----GTAGCTCGAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--GAAGTGTCTATTGTACTCTATGCAAAAATCCAAAGTCATTTGCGTCTTTAAAAATGATATGGATAATTTTTCTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181449 182 + 77229886 AGAATCAA-TT----AAACATGTATGTGTTACTTAGACTAAATATAAA--TAACCCATGTAAATG-----GTAGCTCGAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--GAAGTGTCTATTGTACTCTATGCAAAAATCCAAAGTCATTTGCGTCTTTAAAAATGATATGGATAATTTTTCTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5400932 181 + 17472758 AGAATCAA-TT-----AACATGTATGTGTTACTTAGACTAAATATAAA--TAACCCATGTAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--GAAGTGTCTATTGTACTCTATGCAAAAATCCAAAGTCATTTGCGTCTTTAAAAATGATATGGATAATTTTTCTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441414 180 - 152096393 --AATCAA-TT----AAACATGTATGTGTTACTTGGACTAAATATAAA--TAACCCAAACAAATG-----GTAGCTCAAACAGCT-CAAGCGTTTCA-GAGAATGTT-ATAATCTATTGTTT--AAAGTGTCTATTGTACTCTATGCAAAAATCCAAAGTCATTTGGGTCTTTAAAAATGATATGGATAATTTTTCTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391476 182 + 70235451 AGAATCAA-TT----AAACATGTATGCGTTACTTGGACTACATACAAA--TAACCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTCGTCTATGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTTCTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63082886 182 - 75711847 AGAATCAA-TT----AAACATGTATGCGTTACTTGGACTACATACAAA--TAACCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTCGTCTATGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTTCTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642084 182 - 18804593 AGAATCAA-TT----AAACATGTATGCGTTACTTGGACTACATACAAA--TAACCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTCGTCTATGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTTCTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13253913 183 + 18905526 AGAATCAATTT----AAACATGTATGCGTTACTTGGACTACATACAAA--TAACCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTCGTCTATGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTCCTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082209 182 - 72318688 AGAATCAA-TT----AAACATGTATGCATTACTTGGACTACATACAAA--TAACCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTCGTCTACGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTTCTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419283 182 - 1517660 AGAATCAA-TT----AAACATGTATGCGTTACTTGGACTACATACAAA--TAACCCACATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTTGTCTATGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTTCTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515407 182 + 6513552 AGAATCAA-TT----AAACATGTATGCGTTACTTGGACTACATACACA--TAACTCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATCGTCGTCTATGCAAAAATCCAAAGTCATCTGGATCTTTAAAAATTACATGGATAATTTTTCTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285755 186 + 117903854 AGAATCAA-TT----AAACATGTATGTGTTACTTCGACTAAATACAAGACAAGCCCATATACATT-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGCC-AGAATCTATTGTTTAAAAAGTGTCTATTCTCCGCTATGCAAAAATCCAAAGTCATTTGGGTCTTTAAAAATTATATAGATAATTTTTCTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473280 186 - 31320352 AGAATCAA-TT----AAACATGTATGTATTACTTAGACGAAATACAAGACAATCCCATATAAATG-----GTAGCTTAAACATCT-CAAGTGTTTCA-GAGAATGCC-AGAATCTATTGTTTAAAAAGTGTCTATTATCCTCTATGCAAAAATCCAAAGTCATTTGGGTCTTTAAAAATTATATAGATAATTTTTCTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668588 186 + 2203405 AGAATCAA-TT----AAACATGTATGTGTTATTTAGACTAAATACAAGACAAGCCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGCC-AGAATCTACTGTTTAAAAAGTGTCTATTATCCTGTATGCAAAAATCCAAAGTCATTTGGATCTTTAAAAATTATACAGATAATTTTTCTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621150 182 - 14941987 AGAATCAA-TT----AAAC----ATGTGTTACCTGGACTAAATACAAGACAAGGCCATATAAATG-----GTAGCTCAAACATCT-CAAGTGTTTCA-GAGAATGCC-AGAATCTATTGTTTAAAAAGTGTCTATTATCCTCTATGCAAAAATCCAAAGTCATTTGGGTCTTTAAAAATTATATAGATAATTTTTCTTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535436 177 + 83067054 AGAATCAA-TT----AAACATGTATGTGTTATCTGGAGTA-ACACAACATAAGCCCATGCAAACT-----GTAGCTCAAGCATCT-CAAGTTTTTTAAAAGAATGTT-AGAATCTATTGTTT--AAAGTATCTATCATCCACTGTGCAAA------AAGTCATCTGGGTC-TTAAAAATTATCTGGGTAACTTTTTTTG i micMur3.chr19 I 1 I 1 s proCoq1.NW_012148742v1 1275531 182 - 1406956 AGAATCAA-TT----AAACATGCATGTGTTACTTGGAGTA-ATACAACATAAGCCCATGTAAATT-----TTAGCTCAAGTATCT-CAAGTTTTTTAAAAGAATGTT-AGAATTTATTGTTT--AAAGTGTCTATCATCCTCTGTGCAAAAATCCGAAGTCATCTGGGTC-TTAAAAATTATCTGGGTAA-TTGTTTTG i proCoq1.NW_012148742v1 I 135 I 1 s otoGar3.GL873546 11247030 170 - 20685099 --AATCGA-TT----GAACATGGATGTGTTACTTGGAATG-ATACAACATAAGCCCATGCAAATT-----GTAGGTCAGCTATCT-CAAGTTT-----AAGAATGTT-AGAATCTATTGTTT--AAAGTGTCTATAAT---CTGTGCAAAAGTT--CAATTACTTGGGTC-TTAAAAATTAcagtagaacctctgttc- i otoGar3.GL873546 C 0 I 270 s mm10.chr1 111855893 172 + 195471971 GAAATAAA-TT----AAACACATA-ACATTACTTATGTTAAAAACAT---TAACCCACATAATTGATTTTATAGCACAAACA--T-CAAGATTTATA-----ATGTTAAGAATCTACA------AAATTACCTGTCAT-CTCTGTTCAACCTTT--AAGTCATTTAGATC-TTGCCAATTATTTCAATGTTTTTCTTTG i mm10.chr1 C 0 I 1 s canFam3.chr1 112325920 172 - 122678785 AGAATTAA-TT----AAATATGTACACGTTACTTGAAATAAATGTAACAAAAGCTCATGTAAATT-----ATAGCTCAAGCATCTACAAGT----TA-GAGAATGTT-AGAATCTATTGCTT--GGCGTTCCTATCATCCTTTGTGCAAAAAT------TCATTTAGTTCTTAGGATATTATTTG---AATTTTTCTGC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 500278 166 - 2150887 AGAACCAA-TTTCATATATATGTATTTGTTACTGGGACTAAATACATT---------------AG-----CCAGCTC-----TCT-ACAATTACTTA-AAGAATGTT-AGAATCTATTGTTT--GAATTTCCTATCATCCTTTGTACAAAAATCCAAA--CATTTATGTCTTAATAAATCATTTGGGAATTTTTCCTGC i dasNov3.JH575754 C 0 C 0 a score=143595.000000 s hg38.chr18_GL383571v1_alt 152676 10 + 198278 CGAA----------ATGAAG s panTro5.chr18 65062564 10 + 78221452 CCAA----------ATGAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181631 10 + 77229886 CCAA----------ATGAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401113 10 + 17472758 CGAA----------ATGAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441594 10 - 152096393 TGAA----------ATGAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391658 10 + 70235451 CAAA----------ATGAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083068 10 - 75711847 CAAA----------ATGAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642266 20 - 18804593 CAAAATTCACTTCCATGAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254096 10 + 18905526 CAAA----------ATGAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082391 10 - 72318688 CAAA----------ATGAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419465 10 - 1517660 CAAA----------ATGAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515589 10 + 6513552 CAAA----------ATGAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285941 10 + 117903854 CAAA----------ATGAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473466 10 - 31320352 CAAA----------ATGAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668774 10 + 2203405 CAAA----------ATGAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621332 10 - 14941987 CAAA----------ATGAAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535614 10 + 83067054 CAAA----------ATGAAA i micMur3.chr19 I 1 C 0 s proCoq1.NW_012148742v1 1275714 10 - 1406956 CAAA----------ATGAAA i proCoq1.NW_012148742v1 I 1 C 0 s mm10.chr1 111856066 10 + 195471971 TAAA----------ATGAAG i mm10.chr1 I 1 C 0 s canFam3.chr1 112326092 10 - 122678785 CAAC----------ATGAAG i canFam3.chr1 C 0 I 47 s dasNov3.JH575754 500444 10 - 2150887 CCAA----------ATTAAC i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11247200 270 - 20685099 I a score=168658.000000 s hg38.chr18_GL383571v1_alt 152686 15 + 198278 TGAAATCATG-------------ATTAA s panTro5.chr18 65062574 15 + 78221452 TGAAATCATG-------------ATTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181641 15 + 77229886 TGAAATCATG-------------ATTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401123 15 + 17472758 TGAAATCAAG-------------ATTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441604 15 - 152096393 TGAAATCATG-------------ATTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391668 15 + 70235451 TGAAATCATG-------------ATTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083078 15 - 75711847 TGAAATCATG-------------ATTAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642286 15 - 18804593 TGAAATCATG-------------ATTAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254106 15 + 18905526 TGAAATCATG-------------ATTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082401 15 - 72318688 TGAAATCATG-------------ATTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419475 15 - 1517660 TGAAATCATG-------------ATTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515599 15 + 6513552 TGAAATCATG-------------ATTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285951 15 + 117903854 TGAAATAATG-------------ACTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473476 15 - 31320352 TGAAATAATG-------------ACTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668784 15 + 2203405 TGAAATAATG-------------ACCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621342 15 - 14941987 TAAAATAATG-------------ACTAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535624 15 + 83067054 TGAAATAATG-------------ATTAG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1275724 15 - 1406956 TGAAATAATT-------------ATTAG i proCoq1.NW_012148742v1 C 0 C 0 s mm10.chr1 111856076 6 + 195471971 TAAAAT---------------------- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 500454 28 - 2150887 TGAAATAATGCTACTTGTCACTTACTAA i dasNov3.JH575754 C 0 I 25 e canFam3.chr1 112326102 47 - 122678785 I e otoGar3.GL873546 11247200 270 - 20685099 I a score=909671.000000 s hg38.chr18_GL383571v1_alt 152701 68 + 198278 TCAGATATATCAG--------------ACA-ATTTGGTCAACATTTAAATAAGCAGCTAATAGCCCACATATTAAGTGTCTTG s panTro5.chr18 65062589 68 + 78221452 TCAGATATATCAG--------------ACA-ATTTGATCAACATTTAAATAAGCAGCTAATAGCCCACATATTAAGTGTCTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181656 68 + 77229886 TCAGATATATCAG--------------ACA-ATTTGATCAACATTTAAATAAGCAGCTAATAGCCCACATATTAAGTGTCTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401138 68 + 17472758 TCAGATATATCAG--------------ACA-ATTTGATCAACATTTAAATAAGCAGCTAATAGCCCACATATTAAGTGTCTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441619 68 - 152096393 TCAGACATATTAG--------------ACA-ATTTGGTCAACACTTAAATAAGCAGCTAATAGCCCACATGTTAACTGTCTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391683 68 + 70235451 TCAGAAATATTAG--------------ACA-ATTTGGTCGACATTTAAATAAGCGGCTAATAGCCCACATATTAAGTGTCTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083093 68 - 75711847 TCAGAAATATTAG--------------ACA-ATTTGGTCGACATTTAAATAAGCGGCTAATAGCCCACATATTAAGTGTCTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642301 68 - 18804593 TCAGAAATATTAG--------------ACA-ATTTGGTTGACATTTAAATAAGCGGCTAATAGCCCACATATTAAGTGTCTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254121 68 + 18905526 TCAGATATATTAG--------------ACA-ATTTGGTCGACATTTAAATAAGCGGCTAATAGCCCACATATTAAGTGTCTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082416 68 - 72318688 TCAGATATATTAG--------------ACA-ATTTGGTCGACATTTAAATAAGCGGCTAATAGCCCACATATTAAGTGTCTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419490 68 - 1517660 TCAGATATATTAG--------------ACA-ATTTGGTCGACATTTAAATAAGCGGCTAATAGCCCACATATTAAGTGTCTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515614 66 + 6513552 TCAGATATATTAG--------------ACA-ATTTGGTAGACATTTAAATAAGCGGCTAATAGCCCACATATT--GTGTCTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105285966 68 + 117903854 TCAGATATATTAG--------------ACA-ATTTGGTCAACATTTAAATGAGCAGATAATAGCCCAGAAATTATCTGTCTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473491 68 - 31320352 TCAGATATATTAG--------------ATA-ATTTGATCAACATTTAAATGAGCAGATAATAGCCCAGAAATTAACTGTCTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668799 68 + 2203405 TCAGATATATTTG--------------ACA-ATTTGGTCAACATTTAAATTAGCAGATAATAGCCCAGAAATTAACTGTCTTG i cebCap1.NW_016107689v1 C 0 I 8 s aotNan1.NW_018502140v1 3621357 65 - 14941987 TCAGATACATTAG--------------AAA-ATTTGGT---CATTTAAATTAGCAGATAATAGCCCAGAAATTAACTGTCTTG i aotNan1.NW_018502140v1 C 0 I 8 s micMur3.chr19 41535639 68 + 83067054 TCAGATATATTAA--------------AGA-TTTTGGTCAACAATTAAATAAGCAGGAAATAGCCTACATATTAAATGTCTTG i micMur3.chr19 C 0 I 2 s proCoq1.NW_012148742v1 1275739 68 - 1406956 TCAGATATATTAG--------------AGA-GTTTGGTCAACATTTAAATAAGCAGTAAATAGCCTACATATTAAATGTCTTG i proCoq1.NW_012148742v1 C 0 I 2 s mm10.chr1 111856082 65 + 195471971 TCATGGGAACGAG--------------AAA-ATTTAGCCAAC--CCATATCAGCAAGAAATGGCTCA-ATATTCAATGTTTTA i mm10.chr1 C 0 I 2 s canFam3.chr1 112326149 69 - 122678785 TTATATATATTAG--------------GCACACTTTAGCCACATTTAAATAAGCAGTAAATAGTCCACATGTTAAATTCCTTG i canFam3.chr1 I 47 C 0 s dasNov3.JH575754 500507 82 - 2150887 TTAGACATATTAACTTATATAGCATACATA-ATTTGGTCAATATTTAAATAAGCAGTAAATGTTGCATGTATTACATTTCTTG i dasNov3.JH575754 I 25 I 2 e otoGar3.GL873546 11247200 270 - 20685099 I a score=84058.000000 s hg38.chr18_GL383571v1_alt 152769 7 + 198278 ATATCTT s panTro5.chr18 65062657 7 + 78221452 ATATCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181724 7 + 77229886 ATATCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401206 7 + 17472758 ATATCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441687 7 - 152096393 ATATCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391751 7 + 70235451 ATATCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083161 7 - 75711847 ATATCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642369 7 - 18804593 ATATCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254189 7 + 18905526 ATATCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082484 7 - 72318688 ATATCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419558 7 - 1517660 ATATCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515680 7 + 6513552 GTATCTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286034 5 + 117903854 --TTCTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473559 5 - 31320352 --CTCTT i saiBol1.JH378121 C 0 C 0 s micMur3.chr19 41535709 7 + 83067054 GTATTTT i micMur3.chr19 I 2 C 0 s proCoq1.NW_012148742v1 1275809 7 - 1406956 GTATCTT i proCoq1.NW_012148742v1 I 2 C 0 s mm10.chr1 111856149 7 + 195471971 GTATTTT i mm10.chr1 I 2 C 0 s canFam3.chr1 112326218 7 - 122678785 ATATCTT i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 500591 7 - 2150887 ATATCTT i dasNov3.JH575754 I 2 C 0 e otoGar3.GL873546 11247200 270 - 20685099 I e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I a score=38376.000000 s hg38.chr18_GL383571v1_alt 152776 4 + 198278 AGAA s panTro5.chr18 65062664 4 + 78221452 AGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181731 4 + 77229886 AGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401213 4 + 17472758 AGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441694 4 - 152096393 AGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391758 4 + 70235451 AGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083168 4 - 75711847 AGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642376 4 - 18804593 AGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254196 4 + 18905526 AGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082491 4 - 72318688 AGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419565 4 - 1517660 AGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515687 4 + 6513552 AGAA i colAng1.NW_012115433v1 C 0 C 0 s micMur3.chr19 41535716 4 + 83067054 AGAA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1275816 4 - 1406956 AGAA i proCoq1.NW_012148742v1 C 0 C 0 s mm10.chr1 111856156 4 + 195471971 AGAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112326227 1 - 122678785 A--- i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 500598 4 - 2150887 AGAA i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105286039 0 + 117903854 C e otoGar3.GL873546 11247200 270 - 20685099 I e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I e saiBol1.JH378121 19473564 0 - 31320352 C a score=92733.000000 s hg38.chr18_GL383571v1_alt 152780 10 + 198278 TGTCAGGTAC s panTro5.chr18 65062668 10 + 78221452 TGTCAGGTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181735 10 + 77229886 TGTCAGGTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401217 10 + 17472758 TGTCAGGTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441698 10 - 152096393 TGTCAGGTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391762 10 + 70235451 TGTCAGGTAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083172 10 - 75711847 TGTCAGGTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642380 10 - 18804593 TGTCAGGTAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254200 10 + 18905526 TGTCAGGTAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082495 10 - 72318688 TGTCAGGTAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419569 10 - 1517660 TGTCAGGTAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515691 10 + 6513552 TGTCAGGTAA i colAng1.NW_012115433v1 C 0 C 0 s micMur3.chr19 41535720 10 + 83067054 TGTTAGGTAC i micMur3.chr19 C 0 I 66 s proCoq1.NW_012148742v1 1275820 10 - 1406956 TGTTAGGTAC i proCoq1.NW_012148742v1 C 0 I 196 s mm10.chr1 111856160 10 + 195471971 TGTTAAGTAT i mm10.chr1 C 0 C 0 s dasNov3.JH575754 500602 10 - 2150887 TCTTAAGTGT i dasNov3.JH575754 C 0 C 0 e calJac3.chr13 105286039 0 + 117903854 C e canFam3.chr1 112326228 0 - 122678785 C e otoGar3.GL873546 11247200 270 - 20685099 I e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I e saiBol1.JH378121 19473564 0 - 31320352 C a score=34762.000000 s hg38.chr18_GL383571v1_alt 152790 4 + 198278 CCTT s panTro5.chr18 65062678 4 + 78221452 CCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181745 4 + 77229886 CCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401227 4 + 17472758 CCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441708 4 - 152096393 CCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391772 4 + 70235451 CCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083182 4 - 75711847 CCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642390 4 - 18804593 CCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254210 4 + 18905526 CCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082505 4 - 72318688 CCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419579 4 - 1517660 CCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515701 4 + 6513552 CCTT i colAng1.NW_012115433v1 C 0 C 0 s mm10.chr1 111856170 4 + 195471971 CCTT i mm10.chr1 C 0 I 95 s dasNov3.JH575754 500612 4 - 2150887 CCTT i dasNov3.JH575754 C 0 I 22 e micMur3.chr19 41535730 66 + 83067054 I e proCoq1.NW_012148742v1 1275830 196 - 1406956 I e calJac3.chr13 105286039 0 + 117903854 C e canFam3.chr1 112326228 0 - 122678785 C e otoGar3.GL873546 11247200 270 - 20685099 I e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I e saiBol1.JH378121 19473564 0 - 31320352 C a score=1452770.000000 s hg38.chr18_GL383571v1_alt 152794 258 + 198278 gccaggtgtggtggctcatgcctgtaatcccagcattttgggaggcccaggtgggcagatcaccaggtcaagagattgagaccagcctgaccaatgtggtgaaacgctgtcactactaaaaatacaaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggaggctgacgtaggagaatcacttgaacccggtaggcggaggttgcagtgagccgagatcagaccactgcactccagcctgggc s panTro5.chr18 65062682 258 + 78221452 gccaggtgtggtggctcatgcctgtaatcaaggcattttgggaggcccaggtgggcagatcacgaggtcaagagatcgagaccagcctgaccaatgtggtgaaacgctgtcactactaaaaatacaaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggaggctgacgtaggagaatcgcttgagcccgggaggcggaggttgcagtgagccgagatgagaccactgcactccagcctgggc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64181749 258 + 77229886 gccaggtgtggtggctcatgcctgtaatcccagcattttgggaggcccaggtgggcagatcacgaggtcaagagatcgagaccagcctgaccaatgtggtgaaacgctgtcactactaaaaatacaaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggaggctgacgtaggagaatcgcttgagcccgggaggcggaggttgcagtgagccgagatgagaccactgcactccagcctgggc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401231 257 + 17472758 gccaggtgtggtggctcatgcctgtaatcccagcattttgggaggcccaggtgggcagatcacgaggtcaagagattgagaccagcctgaccaatgtggtgaaacgctgtcactactaaaaatacaaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggaggctgacgtaggagaatcgcttgagcccgggaggcggaggttgcagggagccgatatcagaccactgcactccagcct-ggc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441712 257 - 152096393 gccaggtg-ggtggctcatgcctgtaatcccagcatttggggaggcccaggcgggcagatcacgaggtcaggagatcgagaccagcctgaccagtgtggtgaaacgctgtcactactaaaaatgcaaaaataagccaaacatggtggtgtgcacctgtaatcccagctattcaggaggctgacgtaggagaatcgcttgaacccgggaggcggaggttgcggtgagccgagatcgcaccactgcactccagcttgggc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57391776 258 + 70235451 gccaggcgtggtggctcacacctgtaatcccagcactttgggaggccccggtgggcagatcacgaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggagtttgaagtagttgaatcgcttgaacccggaaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083186 258 - 75711847 gccaggcgtggtggctcacacctgtaatcccagcactttgggaggccccggggggcagatcacgaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggagtttgaagtaggagaatcgcttgaacccggaaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642394 258 - 18804593 gccaggcgtggtggctcacacctgtaatcccagcactttgggaggccccggcgggcagatcacgaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggagtttgaagtaggagaatctcttgaacccggaaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254214 258 + 18905526 gccaggcgtggtggctcacacctgtaatcccagcactttgggaggccccggcgggcagatcacgaggtcaggagttcgaaaccagcctgaccaatgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggagtctgaagtaggagaatcgcttgaacccggaaggcggaggttgcagtgagccaagatcgcaccactgcactccagcctgggt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082509 258 - 72318688 gccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccccggcgggcagatcacgaggtcaggagttcgagaccagcctgaccactgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgcgcacctgtaatcccagctattcaggagtctgaagtagaagaatcgcttgaacccggaaggcagaggttgcagtgagccgagattgcaccactgcactccagcctgggc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419583 258 - 1517660 gccaggcgtggtggctcacacctgtaatcccagcactttgggaggccccggcgggcagatcacgaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgtgcacctgtaatcccagctattcaggagtctgaagtaggagaatcgcttgaacccggaaggcggaggttgcagtgagccgagatcgcaccactgcactccagcctgggc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515705 258 + 6513552 gccaggcatggtggctcacgcctgtaatcccagcactttgggaggcccaggcgggcagatcatgaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactgaaaatataaaaatgagccaagcatggtggcgtgcacctgtaatcacagctattcaggagtctgaagtaggagaattgcttgaacctgtgaggcggaggttgcagtgagccgagatcgcaccactgcactccagcctgggc i colAng1.NW_012115433v1 C 0 C 0 e micMur3.chr19 41535730 66 + 83067054 I e mm10.chr1 111856174 95 + 195471971 I e proCoq1.NW_012148742v1 1275830 196 - 1406956 I e calJac3.chr13 105286039 0 + 117903854 C e dasNov3.JH575754 500616 22 - 2150887 I e canFam3.chr1 112326228 0 - 122678785 C e otoGar3.GL873546 11247200 270 - 20685099 I e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I e saiBol1.JH378121 19473564 0 - 31320352 C a score=121776.000000 s hg38.chr18_GL383571v1_alt 153052 46 + 198278 aacaaagtgagactccatccca-aaaaaaaaa---aaaaaaaaaaaaaaa s panTro5.chr18 65062940 31 + 78221452 gacagagtgagactccatctca-aaaaaaaaa------------------ i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182007 30 + 77229886 gacagagtgagactccatctca-aaaaaaaa------------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401488 49 + 17472758 gacagagtgagactccatctca-aaaaaaaaaaaaaaaaaaaaaaaaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139441969 40 - 152096393 gacagagtgagactccgtctca-aaaaaaaaa---------aaaaaaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392034 35 + 70235451 aacagagtaagactccgtctcc-caaaaaaaa--------------aaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083444 35 - 75711847 aacagagtaagactccgtctcc-caaaaaaaa--------------aaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642652 35 - 18804593 gacagagtaagactccgtctcc-caaaaaaaa--------------aaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254472 36 + 18905526 gacagagtaagacttcatctccaaaaaaaaaa--------------aaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082767 34 - 72318688 gacagagtaagactctgtctcc--aaaaaaaa--------------aaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419841 29 - 1517660 gacagagtaagactccatctcc-------aaa--------------aaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515963 35 + 6513552 gacagagtgagactccttctca-aaaaaaaaa--------------aaaa i colAng1.NW_012115433v1 C 0 C 0 s mm10.chr1 111856269 39 + 195471971 AATTAAGTGATAGGCTACATAC-GAAAAGAAT----------GGCTAAAA i mm10.chr1 I 95 C 0 e micMur3.chr19 41535730 66 + 83067054 I e proCoq1.NW_012148742v1 1275830 196 - 1406956 I e calJac3.chr13 105286039 0 + 117903854 C e dasNov3.JH575754 500616 22 - 2150887 I e canFam3.chr1 112326228 0 - 122678785 C e otoGar3.GL873546 11247200 270 - 20685099 I e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I e saiBol1.JH378121 19473564 0 - 31320352 C a score=9467.000000 s hg38.chr18_GL383571v1_alt 153098 3 + 198278 aga s panTro5.chr18 65062971 2 + 78221452 -ga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182037 2 + 77229886 -ga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401537 3 + 17472758 aGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442009 3 - 152096393 aGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392069 3 + 70235451 aaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083479 3 - 75711847 aaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642687 3 - 18804593 aaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254508 3 + 18905526 aaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082801 3 - 72318688 aaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419870 3 - 1517660 aaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3515998 3 + 6513552 aCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286039 1 + 117903854 --A i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19473564 1 - 31320352 --A i saiBol1.JH378121 C 0 I 2 s otoGar3.GL873546 11247470 3 - 20685099 AGA i otoGar3.GL873546 I 270 C 0 e micMur3.chr19 41535730 66 + 83067054 I e mm10.chr1 111856308 0 + 195471971 C e proCoq1.NW_012148742v1 1275830 196 - 1406956 I e dasNov3.JH575754 500616 22 - 2150887 I e canFam3.chr1 112326228 0 - 122678785 C e aotNan1.NW_018502140v1 3621422 8 - 14941987 I e cebCap1.NW_016107689v1 1668867 8 + 2203405 I a score=12376.000000 s hg38.chr18_GL383571v1_alt 153101 1 + 198278 a s panTro5.chr18 65062973 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182039 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401540 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442012 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392072 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083482 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642690 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254511 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082804 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419873 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516001 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286042 1 + 117903854 A i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19473567 1 - 31320352 A i saiBol1.JH378121 I 2 C 0 s cebCap1.NW_016107689v1 1668875 1 + 2203405 A i cebCap1.NW_016107689v1 I 8 C 0 s aotNan1.NW_018502140v1 3621430 1 - 14941987 A i aotNan1.NW_018502140v1 I 8 C 0 s otoGar3.GL873546 11247473 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41535730 66 + 83067054 I e mm10.chr1 111856308 0 + 195471971 C e proCoq1.NW_012148742v1 1275830 196 - 1406956 I e dasNov3.JH575754 500616 22 - 2150887 I e canFam3.chr1 112326228 0 - 122678785 C a score=343911.000000 s hg38.chr18_GL383571v1_alt 153102 32 + 198278 TGTTAGGTATCCTTACCTTTGGAAGTGGTG--T-----T-- s panTro5.chr18 65062974 32 + 78221452 TGTTAGGTATCCTTACCTTTGGAAGTGGTG--T-----T-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182040 32 + 77229886 TGTTAGGTATCCTTACCTTTGGAAGTGGTG--T-----T-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401541 32 + 17472758 TGTTAGGTATCCTTACCTTTCGAAGTGGTG--T-----T-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442013 32 - 152096393 TGTTAGGTATCCTTACCTTTGGAAGTGATG--T-----T-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392073 32 + 70235451 aGTTCGGTGCCCTTACCTTTGGAAGTGGTG--T-----T-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083483 32 - 75711847 aGTTCGGTGCCCTTACCTTTGGAAGTGGTG--T-----T-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642691 32 - 18804593 aGTTCGGTGCCCTTACCTTTGGAAGTGGTG--T-----T-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254512 32 + 18905526 aGTTCGGTGCCCTTACCTTTGGAAGTGGTG--T-----T-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082805 32 - 72318688 TGTTAGGTGCCCTTACCTTTGGAAGTGGTG--T-----T-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419874 32 - 1517660 CGTTCGGTGCCCTTACCTTTGGAAGTGGTG--T-----T-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516002 34 + 6513552 GGTTAGGTGCCCTTACTTTTGGAAGTGGTGTAT-----T-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286043 32 + 117903854 TGTTAGGTACCCTTATCTTTGGAAGTGGTG--T-----T-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473568 32 - 31320352 AGTTAGGTAGACTTATCTTTGGAAGTGGTG--C-----T-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668876 32 + 2203405 TGTTAGGTGCCCTTATCTTTGGAAGTGGTG--T-----T-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621431 32 - 14941987 TGTTAGGTACCCTTATCTTTGGAAGTGGTG--T-----T-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11247474 37 - 20685099 TGTTAGGTACTATTACTTTTGGAAGTGGTG--TGATAAT-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112326228 34 - 122678785 TATGAGGCATCCTTACCTCTGGAAATGGTA--T-----TAC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41535730 66 + 83067054 I e mm10.chr1 111856308 0 + 195471971 C e proCoq1.NW_012148742v1 1275830 196 - 1406956 I e dasNov3.JH575754 500616 22 - 2150887 I a score=422869.000000 s hg38.chr18_GL383571v1_alt 153134 37 + 198278 ATACTGCATTCTATTTATG--CTTTTTCCTAAATCAACA s panTro5.chr18 65063006 37 + 78221452 ATACTGCATTCTATTTATG--CTTTTTCCTAAATCAACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182072 37 + 77229886 ATACTGCATTCTATTTATG--CTTTTTCCTAAATCAACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401573 37 + 17472758 ATACTGCATTCTATTTATG--CTTTTTCCTAAATCAACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442045 37 - 152096393 ATATTGCCTTGTATTTATG--TTTTTTCCTAAATTAATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392105 37 + 70235451 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083515 37 - 75711847 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642723 37 - 18804593 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254544 37 + 18905526 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082837 37 - 72318688 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419906 37 - 1517660 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516036 37 + 6513552 ATACTGCCTTCTGTTTATG--TTTTTTCCTAAATTAATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286075 37 + 117903854 ATACTGCCTTCTACTTACA--CTTTTTCCTAAATTAATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473600 37 - 31320352 ATACCGCCTTCTACTTACA--CTTTTTCCTAAATTAATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668908 37 + 2203405 ATACCGCCTTCTGCTTACA--CTTTTTCCTAAATTAATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621463 37 - 14941987 ATACTGCCTTCTACTTACA--CTTTTTCCTAAATTAATA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11247511 32 - 20685099 GTATTGCTTTCTACATCCA--TTTTTTCCTAATC----- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856308 16 + 195471971 -----------------------TTTGTCATAATGAACA i mm10.chr1 C 0 C 0 s canFam3.chr1 112326262 39 - 122678785 ATATTGCCTTCTACTTACATTTTTTTTCCTAAATTAATC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 500638 37 - 2150887 ATATTGCCTTTTATTTATA--TTTTCTCCTAAATTTAGA i dasNov3.JH575754 I 22 C 0 e micMur3.chr19 41535730 66 + 83067054 I e proCoq1.NW_012148742v1 1275830 196 - 1406956 I a score=1015702.000000 s hg38.chr18_GL383571v1_alt 153171 83 + 198278 -AATGAAAACGTTT-CTATTTCTGATCAAAGTTAATCAAGCCA----AACAAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA s panTro5.chr18 65063043 83 + 78221452 -AATGAAAACGTTT-CTATTTCTGATCAAAGTTAATCAAGCCA----AACAAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182109 83 + 77229886 -AATGAAAACGTTT-CTATTTCTGATCAAAGTTAATCAAGCCA----AACAAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401610 83 + 17472758 -AATGAAAACGTTT-CTATTTCTGATCAAAGTTAATCAAGCCA----AACAAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442082 83 - 152096393 -AATGAAAACTTTT-CTATTTCTGATCAAAGTTAATCAAGCCA----AACAAAGCAATTCAAAAATTATCATTA-ATATGTACTCACTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392142 84 + 70235451 -CATGAAAACTTTTTTTATTTCTGATCAAAGTTAATCAAGCCA----AATGAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083552 84 - 75711847 -CATGAAAACTTTTTTTATTTCTGATCAAAGTTAATCAAGCCA----AATGAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642760 84 - 18804593 -CATGAAAACTTTTTTTATTTCTGATCAAAGTTAATCAAGCCA----AATGAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254581 84 + 18905526 -CATGAAAACTTTTTTTATTTCTGATCAAAGTTAATCAAGCCA----AATGAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082874 84 - 72318688 -CATGAAAACTTTTAAAATTTCTGATCAAAGTTAATCAAGCCA----AATGAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 419943 84 - 1517660 -CATGAAAACTTTTTTTATTTCTGATCAAAGTTAATCAAGCCA----AATGAAGCAATTCAAAAATTATCACTA-ATATTTACTCACTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516073 83 + 6513552 -CATGAAAACTTTT-TTATTTCTGATCAAAGTTAATTAAGCCA----AATGAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286112 83 + 117903854 -AATGAAAACTTTT-CTACTTCTGATCAGAGTTAATCAAGCCA----AATAAAGCAATTCAAAAATTATCATTA-ACATTTGCTCACTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473637 83 - 31320352 -AATGAAAACTTTT-CTATTTCTGATCAGAGTTAATCAAGCCA----AATAAAGCAATTTAAAAATTATCATTA-ATATTTACTCACTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1668945 83 + 2203405 -AATGAAAACTTTT-CTATTTCTGATCAGAGCTAATCAAGCCA----AATAAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621500 77 - 14941987 -AATGAAAACTTTT-CTATTTCTGATC------AATTAACCCA----AATAAAGCAATTCAAAAATTATCATTA-ATATTTACTCACTTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535796 81 + 83067054 -AATGAAAACTTTT-CTATTTATGATCAA--TTAATCAAAACA----AACATAGCAATTTAAAAAATATCATTG-ATGTTTACTCACTTA i micMur3.chr19 I 66 I 78 s otoGar3.GL873546 11247543 84 - 20685099 -AATGAAAACTTTT-CTACTTATGATCAC--TTAATCAAAACAAAT-AACATAGCAATATGAAGATGATCACTG-ATGCTTATACACTTA i otoGar3.GL873546 C 0 I 9 s mm10.chr1 111856324 42 + 195471971 -----AAATCTTCT---------GATCAATGATA------CCA----AATCAA--AGTCCA------GTCAGTA---------------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112326301 85 - 122678785 -AGCGAATATTTTT-CTAATTATCATCA--GTTAATCAAGCCAATCAAATGTAGTGATTTTAAAACCATTGCTA-ATGTCTACTCACACA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 500675 80 - 2150887 TAGTGAATATTTT--CTAGTTATGATCAG----AATCAAGTCA----AATATAGCAATCTTAAAATTATAATTAAATGTTTACTAACTTA i dasNov3.JH575754 C 0 I 5 e proCoq1.NW_012148742v1 1275830 196 - 1406956 I a score=457404.000000 s hg38.chr18_GL383571v1_alt 153254 41 + 198278 ---AAATTGTGATATACTTTGTATACCAAGAATGCCAAAGATAC s panTro5.chr18 65063126 41 + 78221452 ---AAATTGTGATATACTTTGTATACCAAGAATGCCAAAGATAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182192 41 + 77229886 ---AAATTGTGATATACTTTGTATACCAAGAATGCCAAAGATAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401693 41 + 17472758 ---AAATTGTGATATACTTTGTATACCAAGAATGCCAAAGATAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442165 41 - 152096393 ---TAATTGTGATATACTTCATATATCAAGAATGCCAAAGAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392226 41 + 70235451 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083636 41 - 75711847 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642844 41 - 18804593 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254665 41 + 18905526 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082958 41 - 72318688 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420027 41 - 1517660 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516156 41 + 6513552 ---TAATTGTGATATACTTTGTATACCAAGAATGCCTAGGATAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286195 41 + 117903854 ---TAATTGCGATATACTTTGCATATCAAGAATGTCTAGGATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473720 41 - 31320352 ---TAATTGTGATATACTTTGCATATCAAGAATGTCTAGGATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669028 41 + 2203405 ---TAATTGTGATATACTTTGCATATCAAGAATGTCTAGGATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621577 41 - 14941987 ---TAATTGTGATATACTTTGCATATCAAGAATGTCTAGGATAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11247636 41 - 20685099 ---TAAAGGCAATACGCTTTGTTTATCAAGAATGTCTAGCATGT i otoGar3.GL873546 I 9 C 0 s mm10.chr1 111856366 16 + 195471971 ---AGATTGTAA------------------AATGACA------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112326386 40 - 122678785 ---TAATTG-GATATACTTTACATATCAAGAATGGCTAGGATCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 500760 40 - 2150887 AAACGAATGTGATGTATTTTCTATG--AAGAATGGTTGAGCT-- i dasNov3.JH575754 I 5 C 0 e micMur3.chr19 41535877 78 + 83067054 I e proCoq1.NW_012148742v1 1275830 196 - 1406956 I a score=424986.000000 s hg38.chr18_GL383571v1_alt 153295 33 + 198278 TTGGTGATGTA-CAGAAATCGTTGCTGAACAATT s panTro5.chr18 65063167 33 + 78221452 TTGGTGATGTA-CAGAAATCGTTGCTGAACAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182233 33 + 77229886 TTGGTGATGTA-CAGAAATCGTTGCTGAACAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401734 33 + 17472758 TTGGTGATGTA-CAGAAATCGTTGCTGAACAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442206 33 - 152096393 TTGGTGACGTA-CAGAAATCATTGCTGAACAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392267 33 + 70235451 TTGGTGATGTA-CAGAAATCACTGCTGAACAATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083677 33 - 75711847 TTGGTGATGTA-CAGAAATCACTGCTGAACAATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642885 33 - 18804593 TTGGTGATGTA-CAGAAATCACTGCTGAACAATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254706 33 + 18905526 TTGGTGACGTA-CAGAAATCACTGCTGAACAATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60082999 33 - 72318688 TTGATGATGTA-CAGAAATCACTGCTGAACAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420068 33 - 1517660 TTGATGATGTA-CAGAAATCACTGCTGAACAATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516197 33 + 6513552 TTGGTGATGGA-CAGAAATCACTGCTGAACAATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286236 33 + 117903854 TTGGTGATGTA-CAGAAATCACTGCTGAACAATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473761 33 - 31320352 TTGGTGATGTA-CAGAAATCACTGCTGAACAAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669069 33 + 2203405 TTGGTGATGTA-CAGAAATCACTGCTGAACAATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621618 33 - 14941987 TTGGTGATGTA-CAGAAATCACTGCTGAACAATG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276026 33 - 1406956 TTGGTGATGCA-CAAAAATCTGTGCTGATCAATG i proCoq1.NW_012148742v1 I 196 C 0 s otoGar3.GL873546 11247677 33 - 20685099 TTGGTGATGTA-CAGATATCTCCACTGATCAATG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856382 20 + 195471971 ----TGATGTG-AGATATTCAAGGT--------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112326426 34 - 122678785 TTGATGATGCACCGGAAAGTGCTGATAAACAATG i canFam3.chr1 C 0 I 18 s dasNov3.JH575754 500800 33 - 2150887 TTGACAATGTA-TCCAAATCGCTAGGGAATGACG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41535877 78 + 83067054 I a score=171197.000000 s hg38.chr18_GL383571v1_alt 153328 11 + 198278 ATGCCAACCAA s panTro5.chr18 65063200 11 + 78221452 ATGCCAACCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182266 11 + 77229886 ATGCCAACCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401767 11 + 17472758 ATGCCAACCAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442239 11 - 152096393 ATGCCAACCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392300 11 + 70235451 ATGCCAACCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083710 11 - 75711847 ATGCCAACCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642918 11 - 18804593 ATGCCAACCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254739 11 + 18905526 ATGCCGACCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083032 11 - 72318688 ATGCCAACCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420101 11 - 1517660 ATGCCAACCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516230 11 + 6513552 AAGCCAACCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286269 11 + 117903854 ATACCAACCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473794 11 - 31320352 ATGCCAACCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669102 11 + 2203405 ATGCCAACCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621651 11 - 14941987 ATGCCAATCAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535955 11 + 83067054 ATGCCAACCAA i micMur3.chr19 I 78 C 0 s proCoq1.NW_012148742v1 1276059 11 - 1406956 ATGCCAATCAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11247710 11 - 20685099 ATATCAACGAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856402 4 + 195471971 ATGC------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112326478 11 - 122678785 ACTTCCACAAA i canFam3.chr1 I 18 C 0 s dasNov3.JH575754 500833 11 - 2150887 ATGCCAATCAA i dasNov3.JH575754 C 0 I 664 a score=69716.000000 s hg38.chr18_GL383571v1_alt 153339 9 + 198278 A-----AGTAAG----------------------------------------------T--------------------G s panTro5.chr18 65063211 9 + 78221452 A-----AGTAAG----------------------------------------------T--------------------G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182277 9 + 77229886 A-----AGTAAG----------------------------------------------T--------------------G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401778 9 + 17472758 A-----AGTAAG----------------------------------------------T--------------------G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442250 9 - 152096393 A-----AGTAAG----------------------------------------------T--------------------G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392311 9 + 70235451 A-----AGTAAG----------------------------------------------T--------------------G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083721 9 - 75711847 A-----AGTAAG----------------------------------------------T--------------------G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642929 9 - 18804593 A-----AGTAAG----------------------------------------------T--------------------G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254750 9 + 18905526 A-----AGTGAG----------------------------------------------T--------------------G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083043 9 - 72318688 A-----AGTAAG----------------------------------------------T--------------------G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420112 9 - 1517660 A-----AGTAAG----------------------------------------------T--------------------G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516241 9 + 6513552 A-----AGCAAG----------------------------------------------T--------------------G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286280 9 + 117903854 A-----CGTAAT----------------------------------------------T--------------------G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473805 9 - 31320352 A-----AGTAAG----------------------------------------------T--------------------G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669113 9 + 2203405 A-----AGTAAG----------------------------------------------T--------------------T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621662 9 - 14941987 A-----AGTAAG----------------------------------------------T--------------------G i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535966 9 + 83067054 A-----AGTAAG----------------------------------------------T--------------------G i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1276070 9 - 1406956 A-----AATAAG----------------------------------------------T--------------------G i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11247721 60 - 20685099 AATTGGAGCAAGGGAAACATTTTCATGGAAAGGAGATTTTTAAGACAAGTGTTTCTGTT--------------------G i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856406 8 + 195471971 ------TGTATG----------------------------------------------T--------------------G i mm10.chr1 C 0 C 0 s canFam3.chr1 112326489 29 - 122678785 A-----GGAAAA----------------------------------------------TGTTTAAGATGCACTAGTGTGG i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 500844 664 - 2150887 I a score=52688.000000 s hg38.chr18_GL383571v1_alt 153348 5 + 198278 GTGGA s panTro5.chr18 65063220 5 + 78221452 GTGGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182286 5 + 77229886 GTGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401787 5 + 17472758 GTGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442259 5 - 152096393 GTGGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392320 5 + 70235451 GTGGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083730 5 - 75711847 GTGGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642938 5 - 18804593 GTGGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254759 5 + 18905526 GTGGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083052 5 - 72318688 GTGGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420121 5 - 1517660 GTGGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516250 5 + 6513552 ATGGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286289 5 + 117903854 GTGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473814 5 - 31320352 CTGGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669122 1 + 2203405 C---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621671 5 - 14941987 GTGGA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41535975 5 + 83067054 GTGGA i micMur3.chr19 C 0 I 105 s proCoq1.NW_012148742v1 1276079 5 - 1406956 GTGGA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11247781 5 - 20685099 GAGGA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856414 4 + 195471971 AGAA- i mm10.chr1 C 0 C 0 s canFam3.chr1 112326518 5 - 122678785 GTGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501508 5 - 2150887 GTGGG i dasNov3.JH575754 I 664 C 0 a score=21000.000000 s hg38.chr18_GL383571v1_alt 153353 1 + 198278 G s panTro5.chr18 65063225 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182291 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401792 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442264 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392325 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083735 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642943 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254764 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083057 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420126 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516255 1 + 6513552 G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286294 1 + 117903854 G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473819 1 - 31320352 G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669123 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621676 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276084 1 - 1406956 G i proCoq1.NW_012148742v1 C 0 I 130 s otoGar3.GL873546 11247786 1 - 20685099 G i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856418 1 + 195471971 G i mm10.chr1 C 0 I 3 s canFam3.chr1 112326523 1 - 122678785 G i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 501513 1 - 2150887 G i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41535980 105 + 83067054 I a score=84337.000000 s hg38.chr18_GL383571v1_alt 153354 7 + 198278 --GAGGTTC s panTro5.chr18 65063226 7 + 78221452 --GAGGTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182292 7 + 77229886 --GAGGTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401793 7 + 17472758 --GAGGTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442265 7 - 152096393 --GAGGTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392326 7 + 70235451 --GAGGTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083736 7 - 75711847 --GAGGTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642944 7 - 18804593 --GAGGTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254765 7 + 18905526 --GAGGTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083058 7 - 72318688 --GAGGTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420127 7 - 1517660 --GAGGTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516256 7 + 6513552 --GAGGTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286295 7 + 117903854 --GAGGTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473820 7 - 31320352 --GAGGTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669124 7 + 2203405 --GAGGTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621677 7 - 14941987 --GAGGTTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11247787 7 - 20685099 --AGGATTC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856422 4 + 195471971 --GATG--- i mm10.chr1 I 3 I 1 s canFam3.chr1 112326526 7 - 122678785 --CAGCTTC i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 501514 9 - 2150887 GATAAATTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41535980 105 + 83067054 I e proCoq1.NW_012148742v1 1276085 130 - 1406956 I a score=46180.000000 s hg38.chr18_GL383571v1_alt 153361 3 + 198278 TTC s panTro5.chr18 65063233 3 + 78221452 TTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182299 3 + 77229886 TTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401800 3 + 17472758 TTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442272 3 - 152096393 TTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392333 3 + 70235451 TTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083743 3 - 75711847 TTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642951 3 - 18804593 TTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254772 3 + 18905526 TTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083065 3 - 72318688 TTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420134 3 - 1517660 TTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516263 3 + 6513552 TTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286302 3 + 117903854 TTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473827 3 - 31320352 TTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669131 3 + 2203405 TTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621684 3 - 14941987 TTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41536085 3 + 83067054 TTC i micMur3.chr19 I 105 C 0 s otoGar3.GL873546 11247794 3 - 20685099 TTC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856427 2 + 195471971 TT- i mm10.chr1 I 1 C 0 s canFam3.chr1 112326533 3 - 122678785 TTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501523 3 - 2150887 CTC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1276085 130 - 1406956 I a score=456465.000000 s hg38.chr18_GL383571v1_alt 153364 27 + 198278 TTTGAATACATTTGCAGAGGGCAATGT s panTro5.chr18 65063236 27 + 78221452 TTTGAATACATTTGCAGAGGGCAATGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182302 27 + 77229886 TTTGAATACATTTGCAGAGGGCAATGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401803 27 + 17472758 TTTGAATACATTTGCAGAGGGCAATGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442275 27 - 152096393 TTTGAATATATTTGCAGAGGGCAATGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392336 27 + 70235451 TTTGAATACATTTGCAGAGGGCAATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083746 27 - 75711847 TTTGAATACATTTGCAGAGGGCAATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642954 27 - 18804593 TTTGAATACATTTGCAGAGGGCAATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254775 27 + 18905526 TTTGAATACATTTGCAGAGGGCAATGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083068 27 - 72318688 TTTGAATACATTTGCAGAGGGCAATGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420137 27 - 1517660 TTTGAATACATTTGCAGAGGGCAATGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516266 27 + 6513552 TTTGAATACATTTGCAGAGGGCAATGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286305 27 + 117903854 TTTGAGTACCTTTGCAGAGGGCAATGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473830 27 - 31320352 TTTGAGTACATTTGCAGAGGGCAATGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669134 27 + 2203405 TTTGAGTACATTTGCAGAGGGCAATGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621687 27 - 14941987 TTCGAGTACATTTGCAGAGGGCAATGT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41536088 27 + 83067054 TTTGAATACATTTGCAGAAGGCAATGT i micMur3.chr19 C 0 I 85 s proCoq1.NW_012148742v1 1276215 27 - 1406956 TTTGAATACATTTGCAGAAGGCAATGT i proCoq1.NW_012148742v1 I 130 I 26 s otoGar3.GL873546 11247797 27 - 20685099 TTTATACAAATTTGTAGAAGGCAACTG i otoGar3.GL873546 C 0 I 11 s mm10.chr1 111856429 27 + 195471971 TTTGAAGATATTTGCGATGGATAACTT i mm10.chr1 C 0 C 0 s canFam3.chr1 112326536 27 - 122678785 TTTGAATACATTTGCTGAAGGTTTCTT i canFam3.chr1 C 0 I 10 s dasNov3.JH575754 501526 27 - 2150887 TTTGAATGTATTTGCAGAGTGTGTTAT i dasNov3.JH575754 C 0 C 0 a score=172829.000000 s hg38.chr18_GL383571v1_alt 153391 16 + 198278 AGCAAGACCTGGGAAT s panTro5.chr18 65063263 16 + 78221452 AGCAAGACCTGGGAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182329 16 + 77229886 AGCAAGACCTGGGAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401830 16 + 17472758 AGCAAGACCTGGGAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442302 16 - 152096393 AGCAAGACCTGGGAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392363 16 + 70235451 AGCAAGACCTGGGAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083773 16 - 75711847 AGCAAGACCTGGGAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642981 16 - 18804593 AGCAAGACCTGGGAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254802 16 + 18905526 AGCAAGACCTGGGAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083095 16 - 72318688 AGCAAGACCTGGGAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420164 16 - 1517660 AGCAAGACCTGGGAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516293 16 + 6513552 AGCAAGACCTGGGAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286332 16 + 117903854 ACCAAGACCTGGGAAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473857 16 - 31320352 ACCAAGACCTGGGAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669161 16 + 2203405 ACCAAGATCTGGGAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621714 16 - 14941987 ACCAAGACCTGGGAAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11247835 16 - 20685099 TGCCATTCCTTGGAAT i otoGar3.GL873546 I 11 C 0 s mm10.chr1 111856456 16 + 195471971 GACAGGTCCTCACATC i mm10.chr1 C 0 I 8 s canFam3.chr1 112326573 16 - 122678785 TGCCATGCCTGGGAGT i canFam3.chr1 I 10 C 0 s dasNov3.JH575754 501553 11 - 2150887 GGCAGTTCCTT----- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536115 85 + 83067054 I e proCoq1.NW_012148742v1 1276242 26 - 1406956 I a score=453836.000000 s hg38.chr18_GL383571v1_alt 153407 67 + 198278 TTTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TCTATGTAAAAGGAC s panTro5.chr18 65063279 66 + 78221452 TTTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGC-TTTATTAGTTATTC-TCTACGTAAAAGGAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182345 66 + 77229886 TTTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGC-TTTATTAGTTATTC-TCTATGTAAAAGGAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401846 67 + 17472758 TTTGATACAAGGAAGGACTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TGTATGTAAAAGGAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442318 67 - 152096393 TTTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TCTATGTAAAAGGAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392379 49 + 70235451 TCTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTA------------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083789 49 - 75711847 TCTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTA------------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13642997 49 - 18804593 TCTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTA------------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254818 67 + 18905526 TCTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TCTATGTAAAAGGAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083111 67 - 72318688 TCTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TCTATGTAAAAGGAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420180 67 - 1517660 TCTGATACAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TCTATGTAAAAGGAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516309 67 + 6513552 TCTGACACATGGAAGGATTGTCCCATTC-------TTGTC-----AGGCATTTATTAGTTATTC-TCTATGTAAAAGGAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286348 49 + 117903854 TTTGATATAAGGAAGGATTGTCACATTC-------TTGTC-----AGGTGTTTATTAATTA------------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473873 45 - 31320352 TTTGATATAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGTATTT----ATTA------------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669177 49 + 2203405 TCTGATAGAAGGAAGGATTGTCCCATTC-------TTGTC-----AGGTATTTATTAATTA------------------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621730 45 - 14941987 TTTGATATAAGGAAGGACTGTCCCATTC-------TTGTC-----AGGTATTT----ATTA------------------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276268 63 - 1406956 TTTGATATAAAAAAGAATTGTCCCATTC-------TTGCC-----AGGAATTTATTAATTCTAC-TCTAAAAAAAT---- i proCoq1.NW_012148742v1 I 26 C 0 s otoGar3.GL873546 11247851 60 - 20685099 -TTGACATAAATGAGAATTGTCCCATTC-------TTTCA-----AGGAATTAATTTTTCTTTA-TCTAAAAAT------ i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856480 58 + 195471971 CTTGA-AAAAGACAACTTTAACTCAT-------------------AGGAGACAGTTAATTATTC-TGCTTTTCTAACGA- i mm10.chr1 I 8 C 0 s canFam3.chr1 112326589 55 - 122678785 TTTAACAC-------------CCCATTC-------TTGCC-----AGATATTTACTAACTCTCCGTTGGTTTAAAAAGAC i canFam3.chr1 C 0 I 4 s dasNov3.JH575754 501564 53 - 2150887 TGCCATTCCTGGGAACCCTATCCAATTCCTCAATTTTGTCTAAAAAGAAAGTC--------------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536115 85 + 83067054 I a score=602921.000000 s hg38.chr18_GL383571v1_alt 153474 57 + 198278 AATCAAATGTCTAATATTTTGGTGTCCACACCTAA--------------------------------------------------------------ACGTACATATTGTTGTGTCATC s panTro5.chr18 65063345 57 + 78221452 AATCAAATGTCTAATATTTTGGTGTCCACACCTAA--------------------------------------------------------------ACGTACATATTGTTGTGTCATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182411 57 + 77229886 AATCAAATGTCTAATATTTTGGTGTCCACACCTAA--------------------------------------------------------------ACGTACATATTGTTGTGTCATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401913 57 + 17472758 AATCAAATGTCTAATATTTTGGTGTCCACACCTAA--------------------------------------------------------------ACGTACATATTGTTGTGTCATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442385 57 - 152096393 AATCAAATGTCTAATATTTTGGTGCCTACACCTAA--------------------------------------------------------------ACGTACATATTCTTGTGTCATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392428 35 + 70235451 ----------------------TGTTTACACCTAA--------------------------------------------------------------ACATACATATTCTTGCATCATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083838 35 - 75711847 ----------------------TGTTTACACCTAA--------------------------------------------------------------ACATACATATTCTTGCATCATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643046 35 - 18804593 ----------------------TGTTTACACCTAA--------------------------------------------------------------ACATACATATTCTTGCATCATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254885 57 + 18905526 AATCAAATGTCTAATATTTTGGTGTTTACACCTAA--------------------------------------------------------------ACATACATATTCTTGCATCATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083178 57 - 72318688 AATCAAATGTCTAATATTTTGGTGTTTACACCGAA--------------------------------------------------------------ACATACATATTCTTGCATTATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420247 57 - 1517660 AATCAAATGTCTAATATTTTGGTGTTTACACCTAA--------------------------------------------------------------ACATACATATTCTTGCATCATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516376 57 + 6513552 AATCAAATATCTAATATTTTGGTGTCTACACCTAA--------------------------------------------------------------ACATACATATTCTTGTGTCATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286397 56 + 117903854 --TTAAATGTCTAATATTTTGGTGTCTATACCTAA-------------------------------------------------------------CGTGTACCTATTCTCATGTCATC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473918 56 - 31320352 --TTTAATGTCTAATATTTTGGTGTCTACATCTAA-------------------------------------------------------------TATGTACATATTCTCATGTCATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669226 55 + 2203405 --TTAAATGTCTAATATTTTGGTGTCTATACCTAA-------------------------------------------------------------TATGTACATATTCTCATGT-GTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621775 56 - 14941987 --TTAAATGTCTAATATTTTGGTGTCTATACCTAA-------------------------------------------------------------TATGTACATATTCTCATGTCATC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41536200 58 + 83067054 AATCAAATGTCTAATATTTTAGTGTCTAGGCCTAA-------------------------------------------------------------TATGTACATATTCTTGTGTCATC i micMur3.chr19 I 85 I 595 s proCoq1.NW_012148742v1 1276331 58 - 1406956 AATCAAATGTCTAATATTTTAGTGTCTAGGCCTAG-------------------------------------------------------------TATGTACATATTATTGTGTCATC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11247911 58 - 20685099 TATCAAATGTCTAATGTTTTAGAGTCTAAGTCAAA-------------------------------------------------------------TATGTACATATTCTTGTGTCATA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856538 58 + 195471971 AACCAAATGTGTTGCTTTCTGGAATCTAAGCTTAA-------------------------------------------------------------TGTGTACATGTCATTGTATCATC i mm10.chr1 C 0 C 0 s canFam3.chr1 112326648 113 - 122678785 AACCAAAGGTTTAATATTTCGG-GTCTAGATCTAATATGTATGTGGGGttttttttttttttaatttaaaaCCTTTATTAACAGGTACTTACCTAATATGTACATATTCTTGTT----- i canFam3.chr1 I 4 C 0 s dasNov3.JH575754 501617 56 - 2150887 AATCAAGCATTTAAAATTTTGCAGTCCAATCCTAT---------------------------------------------------------------CATATACATTCTCATGTTATC i dasNov3.JH575754 C 0 I 2 a score=1850774.000000 s hg38.chr18_GL383571v1_alt 153531 165 + 198278 -----ACTTTGTT--AAAATTTA---AAT-TTTA---AATTAAATTC---TACAAAC-TAAA-TCTATGCA--------GATTTAGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTT-------CCTCTGAG-TTTTCAT-----TAAATTCAACTCT-GAATATGGCCTTTTTATTTCATCTTGAGTAA----ATC---TATGTTGTTTGAAA s panTro5.chr18 65063402 165 + 78221452 -----ACTTTGTT--AAAATTTA---AAT-TTTA---AATTAAATTC---TACAAAC-TAAA-TCTATGCA--------GATTTAGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTT-------CCTCTGAG-TTTTCAT-----TAAATTAAACTCT-GAATATGGCCTTTTTATTTCATCTTGAGTAA----ATC---TATGTTGTTTGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182468 165 + 77229886 -----ACTTTGTT--AAAATTTA---AAT-TTTA---AATTAAATTC---TACAAAC-TAAA-TCTATGCA--------GATTTAGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTT-------CCTCTGAG-TTTTCAT-----TAAATTAAACTCT-GAATATGGCCTTTTTATTTCATCTTGAGTAA----ATC---TATGTTGTTTGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5401970 165 + 17472758 -----ACTTTGTT--AAAATTTA---AAT-TTTA---AATTAAATTC---TACAAAC-TAAA-TCTATGCA--------GATTTAGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTT-------CCTCTGAG-TTTTCAT-----TAAATTAAACTCT-GAATATGGCCTTTTTATTTCATCTTGAGTAA----ATC---TATGTTGTTTGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442442 170 - 152096393 -----TCTTTGTT--AAAGTTTA---CAT-TTTA---AATTAAATTC---TACAAAT-TAAA-TGTATGCA--------GATTCAGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTT-------CCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTAAGTAA----ATC---TATGTTGTTTGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392463 176 + 70235451 -----TCTTTGtt--aaaattta---aat-ttta---aattaaattc---tacaaat-taaa-tttATGCA--------GATTTAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTA-TCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTCTGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63083873 177 - 75711847 -----TCTTTGTT--AAaattta---aat-ttta---aattaaattc---tacaaat-taaa-ttTATGCA--------GATTTAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTCTGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643081 177 - 18804593 -----TCTTTGTT--AAaattta---aat-ttta---aattaaattc---tacaaat-taaa-ttTATGCA--------GATTTAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTCTGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13254942 170 + 18905526 -----TCTTTGTT--AAaa-----------ttta---aattaaattc---tacaaat-taaa-ttTATGCA--------GATTTAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTCTGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083235 177 - 72318688 -----TCTTTGTT--AAaattta---aat-ttta---aattaaattc---tacaaat-taaa-ttTATGCA--------GATTTAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTCTGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420304 175 - 1517660 -----TC--TGTT--AAaattta---aat-ttta---aattaaattc---tacaaat-taaa-ttTATGCA--------GATTTAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTCTGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516433 172 + 6513552 -----TCTTTGTT--AAAATTTA---AAT-T--------TTAAATTC---TACAAAT-TAAA-TCTATGAA--------GATTCAGCTGCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCCCTCTGAA-TTTTCATTAGAGTAAATTAAACTCT-GAATATGGCCTTTTCATTTCATCCTGAGTAA----ATC---TATGTTGTTTGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286453 176 + 117903854 -----TGCTTATT--AAAATTTG---AAC-TTTA---AATTAAATTC---TACAAAT-TAAA-TTTATGTA--------GATTTAGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCTCTCTGAA-TTTTCATTACAGTAAA-TAAACTTT-GAATATGGCCTTTTTATTTCATCCTGAATAA----ATC---TATGTTGTATGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19473974 175 - 31320352 -----TGCTTATT--AAAATTGG---AA--TTTA---AATTAAATTC---TACAAAT-TAAA-TTTATGTA--------GATTTAGGTTATTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCTCTCTGAA-TTTTCATTACAGTAAA-TAAACTCT-GAATATGGCCTTTTTATCTCATCCTGAATAA----ATC---TATGTTGTATGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669281 171 + 2203405 -----TGCTTatt--aaaatttg---aat-ttta---aattaaattc---tacaaat-ta------atgta--------gatttaGCTTCTTTCTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTCTCTCTGAA-TTTTCATTACAGTAAA-TAAACTCT-GAATATGGCCTTTTTATTTCATCCTGAATAA----ATC---TATGTTGTATGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3621831 176 - 14941987 -----TGTTTatt--aaaatttg---aat-ttta---aattaaattc---tacaaat-taaa-tttatgta--------gatttaGCTTCTTTTTCCTGAGCAGA-----TTT-----------TCCTATTTCCTATTTTCTCTGAA-TTTTCATTACAGTAAA-TAAACTCT-GAATATGGCCTTTTTATTTCATCCTGAATAA----ATC---TATGATGTATGAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276389 179 - 1406956 -----TGCTTatt--aaaatttg---aat-ttta-----tttaattt---tacaaat-taaa-tttaaGCATATTCATAGGTTTGGCTTTCTTCTCCTGAGCAGATTC--TCC-----------TGCTATCT-------TCTCTGGA-TTTTCATTATAGTAAATTCACATCT-GGATATGGCCTTTCTATTTGATCCTGAGTAA----ATC---TGCATTGTTTGAAA i proCoq1.NW_012148742v1 C 0 I 39 s otoGar3.GL873546 11247969 180 - 20685099 -----TGCATCTT---AAATTTG---AAA-TTTATTGGCTTTAATTC---TACAAAA-AAAA-AATAAGGA-ATCCATAGGTTTGCCTTCCTTCTCCTAAACAGACTCAATTT-----------CCCTGTCT-------TGTCCAGA-CATTCATTACAGTAAATTCACATCT-AAATACGGC----CTATGTGATCCTGAGTCA----ATC---TGCATTGTTTGAAA i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111856596 139 + 195471971 ----------------CAATAAA---AAT-CATA---AATTACATTTAAGCATAAACATAAA-TTTA---A--------TATCCAG--GCTTTTCAAAAAACAAA----------------------------------ACTCTAAG------------GGAATTTTAGCTTTAGGATGGGTTGTTTTCTAATCATCTAGAATAA----ATC---TGTACTGGTTGTGA i mm10.chr1 C 0 I 2 s canFam3.chr1 112326761 184 - 122678785 -----ATTTGCTT--AAAACTTGTGCCAC-TTTA---GGT----TTC---TATCAAT-TAAA-TTTAGGCATACTCATCAATTCATCTTGCTTTTCCTGA--AGA-----GTC-----------TCCTACTTCCTATTCTCTCCAGA--ATTCATTACAGTAAACTCAGTTCT-GGATATGGTCTTATTCTTTCATCCGAAGTGA----GTCATTTGCATTATTTCTAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501675 197 - 2150887 ACTGTAGAGTGTTAAAAAATGTG---ACTGTTTA---AGT----TTT---CATAAAT-TAAAGCCTATTCA------TCTATTTAGCTTCCTTCTT---AATAGA-----TTTTATAAGAAATCTCTAACTTTTTATCTTCACTGGAGTTTTCATTTCAGCAAAGTCAATTCT-TAATATGGCTCTTCTAGTTAACCCTAAGTGAGTGTATT---TGCATTCATTGAAA i dasNov3.JH575754 I 2 C 0 e micMur3.chr19 41536258 595 + 83067054 I a score=240066.000000 s hg38.chr18_GL383571v1_alt 153696 38 + 198278 ATTTAAAAAGCCA--------ATTATCATTATATTTGTT-ACTTCAC s panTro5.chr18 65063567 38 + 78221452 ATTTAAAAAGCCA--------ATTATCATTATATTTGTT-ACTTCAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182633 38 + 77229886 ATTTAAAAAGCCA--------ATTATCATTATATTTGTT-ACTTCAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402135 38 + 17472758 ATTTAAAAAGCCA--------ATTATCATTATATTTGTT-ACTTCAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442612 38 - 152096393 ATTTAAAAAGCCA--------ATTATCATTATATTTGTT-ACTTCAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392639 33 + 70235451 ATTTAAAAAGCCA--------ATTACCATTATATTTGTT------AT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084050 33 - 75711847 ATTTAAAAAGCCA--------ATTACCATTATATTTGTT------AT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643258 33 - 18804593 ATTTAAAAAGCCA--------ATTACCATTATATTTGTT------AT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255112 33 + 18905526 ATTTAAAAAGCCA--------ATTACCATTATATTTGTT------AT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083412 33 - 72318688 ATTTAAAAAGCCA--------ATTACCATTATATTTGTT------AT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420479 33 - 1517660 ATTTAAAAAGCCA--------ATTACCATTATATTTGTT------AT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516605 21 + 6513552 ------------A--------ATTACCATTATATTTGTT------AC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286629 38 + 117903854 CTTTAAAAAGCCA--------ATTATCATTACATTAGTT-ACTTTAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474149 32 - 31320352 CTTTAAAAAGCCA--------ATTATCATTA------TT-GTGTTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669452 37 + 2203405 CTTTAAAAAGCCA--------ATTATCATTA-TTTTGTT-ACTTTAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622007 32 - 14941987 CTTTAAAAAGCCA--------ATTATATTTG------TT-ACTTTAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11248150 39 - 20685099 TTTTGAAAACCAT--------ATTTTCATTATATTTATTGATTTTAC i otoGar3.GL873546 I 1 I 1 s mm10.chr1 111856737 37 + 195471971 TTTTAAAAACTTC--------ATTACCAATATTTCTCTC-CTTTCC- i mm10.chr1 I 2 C 0 s canFam3.chr1 112326945 43 - 122678785 CTTTTGAGAACCATATATATTATTACCACTGCATTTGTT-ACTC--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501872 21 - 2150887 GTTTTGATAACTA--------GATGCTAC------------------ i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536258 595 + 83067054 I e proCoq1.NW_012148742v1 1276568 39 - 1406956 I a score=503555.000000 s hg38.chr18_GL383571v1_alt 153734 39 + 198278 TTTTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA s panTro5.chr18 65063605 39 + 78221452 TTTTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182671 39 + 77229886 TTTTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402173 39 + 17472758 TTTTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442650 35 - 152096393 TTTTGTCAGCAA----AATAAGTCCTTTCAAAATTTTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392672 39 + 70235451 TATTGTCAGCAAAATTATTAAGTCCTTTCAAAATTTTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084083 39 - 75711847 TATTGTCAGCAAAATTATTAAGTCCTTTCAAAATTTTAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643291 39 - 18804593 TATTGTCAGCAAAATTATTAAGTCCTTTCAAAATTTTAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255145 39 + 18905526 TATTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083445 39 - 72318688 TATTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420512 39 - 1517660 TATTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516626 39 + 6513552 TATTGTCTGCAAAATTAATAAGTCCTTTCAAAATTTTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286667 37 + 117903854 TTTTGTCAGCAAAATTAAT--GTCTTCTCAAAATTTTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474181 39 - 31320352 TTTAGTTAGCAAAATTAATAAGTCCTTTCAAAATTTTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669489 39 + 2203405 TTTTGTCAGCAAAATTAATAAGTCCTTTCAAAATTTTAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622039 39 - 14941987 TTTTGTCAGCAAAATTAGTAAGTCCTTTCAAAATTTTAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276607 39 - 1406956 TTTTGTCAGCAAGATTAACACATCCTTTCAAAATTTTAA i proCoq1.NW_012148742v1 I 39 I 332 s otoGar3.GL873546 11248190 39 - 20685099 TGTTATCAGCAAGATTAATACATCCTTTCAAAATTTTAA i otoGar3.GL873546 I 1 I 31 s mm10.chr1 111856774 30 + 195471971 ACCTAATAGCATAATT---------TTCCAAAATTCCTA i mm10.chr1 C 0 C 0 s canFam3.chr1 112326988 31 - 122678785 ----ATGAGTAAAGTCTTT----TTTTTTTTAATTTCAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501893 37 - 2150887 TTTAGTCAGTAAAATTAAC--CTTCTTTCAAAATTTCAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536258 595 + 83067054 I a score=244890.000000 s hg38.chr18_GL383571v1_alt 153773 31 + 198278 -AATTTCAA-----------------------------------------------------------------------TCCTATTATTATAAT-AAAA------------------------------GCAA- s panTro5.chr18 65063644 31 + 78221452 -AATTTCAA-----------------------------------------------------------------------TCCTATTATTGTAAT-AAAA------------------------------GCAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182710 31 + 77229886 -AATTTCAA-----------------------------------------------------------------------TCCTATTATTGTAAT-AAAA------------------------------GCAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402212 31 + 17472758 -AATTTCAA-----------------------------------------------------------------------TCCTATTATTGTAAT-AAAA------------------------------GCAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442685 31 - 152096393 -AATTTCAA-----------------------------------------------------------------------TCCTATTACTGTAAT-AAAA------------------------------GCAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392711 31 + 70235451 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-AAAA------------------------------GCAT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084122 31 - 75711847 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-AAAA------------------------------GCAT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643330 31 - 18804593 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-AAAA------------------------------GCAT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255184 31 + 18905526 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-AAAA------------------------------GCAT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083484 31 - 72318688 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-GAAA------------------------------GCAT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420551 31 - 1517660 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-AAAA------------------------------GCAT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516665 31 + 6513552 -AATGTCAA-----------------------------------------------------------------------TCCTATTATTTTAAT-AAAA------------------------------GCAT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286704 32 + 117903854 -AATTTCAA-----------------------------------------------------------------------TCCTATTATTTTAATAAAAA------------------------------GCAT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474220 32 - 31320352 -AATTTCAA-----------------------------------------------------------------------TCCTATTATTTTAATAAAAA------------------------------GCAT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669528 32 + 2203405 -AACCTCAA-----------------------------------------------------------------------TCCTATTATTTTAATAAAAA------------------------------GCAT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622078 32 - 14941987 -AATTTTAA-----------------------------------------------------------------------TCCTATTATTTTAATAAAAA------------------------------GCAT- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11248260 132 - 20685099 -aattccagcactttgggaggctgaagtgggaggatcacttgaggccaggagtcggagaccagcctaagcaagagtcagcttctatctctataaa-aaaaaatagaaaagtcagccagacatggtggcctgcac- i otoGar3.GL873546 I 31 I 6 s mm10.chr1 111856804 19 + 195471971 -----------------------------------------------------------------------------------TGTTATTTTAA--ATGA------------------------------GTAT- i mm10.chr1 C 0 C 0 s canFam3.chr1 112327019 31 - 122678785 -GACTTAAA-----------------------------------------------------------------------TTCTATTATTTTAAT-AACA------------------------------GTTT- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501930 28 - 2150887 GAAT----------------------------------------------------------------------------TGCTATTATTTTAAC-AAAA------------------------------GGTTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536258 595 + 83067054 I e proCoq1.NW_012148742v1 1276646 332 - 1406956 I a score=38220.000000 s hg38.chr18_GL383571v1_alt 153804 2 + 198278 TT s panTro5.chr18 65063675 2 + 78221452 TT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182741 2 + 77229886 TT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402243 2 + 17472758 TT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442716 2 - 152096393 TT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392742 2 + 70235451 TT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084153 2 - 75711847 TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643361 2 - 18804593 TT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255215 2 + 18905526 TT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083515 2 - 72318688 TT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420582 2 - 1517660 TT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516696 2 + 6513552 TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286736 2 + 117903854 TT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474252 2 - 31320352 TT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669560 2 + 2203405 TT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622110 2 - 14941987 TT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276978 2 - 1406956 TT i proCoq1.NW_012148742v1 I 332 C 0 s otoGar3.GL873546 11248398 2 - 20685099 tt i otoGar3.GL873546 I 6 I 121 s mm10.chr1 111856823 2 + 195471971 TT i mm10.chr1 C 0 C 0 s canFam3.chr1 112327050 2 - 122678785 TT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501958 2 - 2150887 TT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536258 595 + 83067054 I a score=74146.000000 s hg38.chr18_GL383571v1_alt 153806 5 + 198278 ATCTC s panTro5.chr18 65063677 5 + 78221452 ATCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182743 5 + 77229886 ATCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402245 5 + 17472758 ATCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442718 5 - 152096393 ATCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392744 5 + 70235451 ATCCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084155 5 - 75711847 ATCCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643363 5 - 18804593 ATCCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255217 5 + 18905526 ATCCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083517 5 - 72318688 ATCCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420584 5 - 1517660 ATCCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516698 5 + 6513552 ATCCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286738 5 + 117903854 ATCTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474254 5 - 31320352 ATCTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669562 5 + 2203405 ATCTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622112 5 - 14941987 ATCTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1276980 5 - 1406956 ATCCC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11248521 5 - 20685099 ATCCC i otoGar3.GL873546 I 121 C 0 s mm10.chr1 111856825 5 + 195471971 GTGCC i mm10.chr1 C 0 C 0 s canFam3.chr1 112327052 5 - 122678785 ATCCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 501960 5 - 2150887 ACCGC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536258 595 + 83067054 I a score=843713.000000 s hg38.chr18_GL383571v1_alt 153811 72 + 198278 AATTAGGCCTATGTTTGGGGAAGTTAA----TGTAGAAAAAGACGGATTTTACAGATAAGAAAT------TTTGTAAGTGTT s panTro5.chr18 65063682 72 + 78221452 AATTAGGCCTATGTTTGGGGAAGTTAA----TGTACAAAAAGACGGATGTTACAGATAAGAAAT------TTTGTAAGTGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182748 68 + 77229886 AATTAGGCCTATGTTTGGGGAAGTTAA----TGTACAAAAAGACGGATGTTACAGATAAGAAAT------TTT----GTGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402250 68 + 17472758 AATTAGGCCTATGTTTGGGGAAGTTAA----TGTACAAAAAGACGGATTTTACAGATAAGAAAT------TTT----GTGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442723 72 - 152096393 AATTAGGCCTATGTTTGGGGAAGTTAA----TGTAGAAAAAGACGGATTTTACAGATTAGAAAT------TTTGTAAGTGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392749 72 + 70235451 AATTAGGCCTATGTATGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATGAGAAAT------TTTATAATTATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084160 72 - 75711847 AATTAGGCCTATGTATGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATGAGAAAT------TTTATAATTATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643368 72 - 18804593 AATTAGGCCTATGTATGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATGAGAAAT------TTTATAATTATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255222 72 + 18905526 AATTAGGCCTATGTATGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATGAGAAAT------TTTATAATTATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083522 72 - 72318688 AATTAGGCCTATGTATGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATGAGAAAT------TTTATAATTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420589 72 - 1517660 AATTAGGCCTACGTATGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATGAGAAAT------TTTATAATTATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516703 72 + 6513552 AATTAGGCCTATGTTTGGGGAAGTTAA----TGTAGAAAAAGATGGATTTTACAGATAAGAAAT------TTTATAATTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286743 66 + 117903854 AATTAGGCCTATCTTTGGGGAAGTTAA----TGTAGAAAAATATGGATTTTACATTAAAGAAAT------TT------TGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474259 68 - 31320352 AATTAGGTCTATCTTTGGGGAAGTTAA----TGTAGAAAAATATGGATTTTACATTTAAAAAAT------TTT----ATGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669567 68 + 2203405 AATTAGGTCTATCTTTGGGGAATTTAA----TGTAGAAAAATATGGATTTTACATTAAAGAAGT------TTT----ATGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622117 68 - 14941987 AATTAGGCCTATCTTTGGGGAAGTTAA----TGTAGAAAAATATGGATTTTACATTAAAGAAAT------TTT----ATGTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41536853 72 + 83067054 AATTAGGACTACGTTTGAGGAAGTTAA----TAAAGAAAGGGATTGATTTTGTAGATAGAACAT------TTTATAAATGCT i micMur3.chr19 I 595 C 0 s proCoq1.NW_012148742v1 1276985 72 - 1406956 AATTAGGACTAAGTTTGAGGAAGTTTA----TAAAGAAAGGGATTGATTTTGTAGATAGAACAT------TTTATAAATGCT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11248526 76 - 20685099 AATTAGGGCTGAGTTTCAGGAAGTTAATTTTTTTAAAAAAGGATTGATTTTGTACATAGAACAT------TTTATAAATACT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856830 62 + 195471971 AATTAGTCTTAAGTATGAAGATACTGA----T----AAAGAAATGGCTTTTACAGATACAATAT------TTTAAA------ i mm10.chr1 C 0 C 0 s canFam3.chr1 112327057 78 - 122678785 AATTAGTTCTAAGTCTGAGGACATTAA----TATAGAAAGGGGTTAATTACACAGAGGACAGGTGTTTCCTTTAAAAGTGTC i canFam3.chr1 C 0 I 139 s dasNov3.JH575754 501965 50 - 2150887 AATTGGACATAAGTTTGGGAAAGCTAA-------AGAAATGTATTGGTCTTACAGAC------------------------- i dasNov3.JH575754 C 0 C 0 a score=690349.000000 s hg38.chr18_GL383571v1_alt 153883 45 + 198278 TCTTT------------------------------------------------CAGAAGTATCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- s panTro5.chr18 65063754 45 + 78221452 TCTTT------------------------------------------------CAGAAGTATCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182816 45 + 77229886 TCTTT------------------------------------------------CAGAAGTATCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402318 45 + 17472758 TCTTT------------------------------------------------CAGAAGTATCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442795 45 - 152096393 TCTTT------------------------------------------------CAGAAGTATCAGATA---GTGGTAATCCCTCTTTTAATT-----ATTT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392821 45 + 70235451 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ACTT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084232 45 - 75711847 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ACTT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643440 45 - 18804593 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ACTT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255294 45 + 18905526 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ACTT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083594 45 - 72318688 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420661 45 - 1517660 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ACTT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516775 45 + 6513552 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286809 45 + 117903854 TCTTT------------------------------------------------CAGAAGTGCCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474327 45 - 31320352 TCTTT------------------------------------------------CGGAAGTGTCAGATA---GTGATAATCCCTCTTTTTATT-----ATTT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669635 45 + 2203405 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622185 45 - 14941987 TCTTT------------------------------------------------CAGAAGTGTCAGATA---GTGATAATCCCTCTTTTAATT-----ATTT- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41536925 45 + 83067054 TCCCT------------------------------------------------CAGAAGTATTAGATA---GTGATAATCCATCTTTTAATT-----ATTT- i micMur3.chr19 C 0 I 202 s proCoq1.NW_012148742v1 1277057 45 - 1406956 TCCTT------------------------------------------------CAGAAGTATTAGATA---GTGATAATCCATCCTTTAATT-----ATTT- i proCoq1.NW_012148742v1 C 0 I 10 s otoGar3.GL873546 11248602 45 - 20685099 TCTTC------------------------------------------------TGGAAGTGTTAGGTA---GTGATAATCTATCCTTTAATT-----ATTT- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111856892 38 + 195471971 TTCTC------------------------------------------------CATAAGCAATAAAAA------ATAATCTTATTTGTATTT---------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112327274 93 - 122678785 tctctgtgtgtgtgtgtgtgactatcataaaaaaaaaaaaaaaaattaaaaaaCAGAAGTGTCACATA---GTGACAATCATCCCTTTAATT-----ATTT- i canFam3.chr1 I 139 C 0 s dasNov3.JH575754 502015 49 - 2150887 -----------------------------------------------------CGGAAATGTCAGATATCTGTGACAATCCCTCCTTTATTTTCAAGATGTT i dasNov3.JH575754 C 0 C 0 a score=13649.000000 s hg38.chr18_GL383571v1_alt 153928 2 + 198278 CA s panTro5.chr18 65063799 2 + 78221452 CA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182861 2 + 77229886 CA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402363 2 + 17472758 CA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442840 2 - 152096393 TA i nomLeu3.chr4 C 0 I 5 s rheMac8.chr18 57392866 2 + 70235451 TA i rheMac8.chr18 C 0 I 5 s macFas5.chr18 63084277 2 - 75711847 TA i macFas5.chr18 C 0 I 5 s macNem1.NW_012016688v1 13643485 2 - 18804593 TA i macNem1.NW_012016688v1 C 0 I 5 s cerAty1.NW_012001075v1 13255339 2 + 18905526 TA i cerAty1.NW_012001075v1 C 0 I 5 s chlSab2.chr18 60083639 2 - 72318688 TA i chlSab2.chr18 C 0 I 5 s manLeu1.NW_012106698v1 420706 2 - 1517660 TA i manLeu1.NW_012106698v1 C 0 I 5 s colAng1.NW_012115433v1 3516820 2 + 6513552 TA i colAng1.NW_012115433v1 C 0 I 5 s calJac3.chr13 105286854 2 + 117903854 TA i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19474372 2 - 31320352 TA i saiBol1.JH378121 C 0 I 5 s cebCap1.NW_016107689v1 1669680 2 + 2203405 TA i cebCap1.NW_016107689v1 C 0 I 5 s aotNan1.NW_018502140v1 3622230 2 - 14941987 TA i aotNan1.NW_018502140v1 C 0 I 5 s otoGar3.GL873546 11248647 2 - 20685099 TC i otoGar3.GL873546 C 0 I 9 s canFam3.chr1 112327367 2 - 122678785 TC i canFam3.chr1 C 0 I 8 s dasNov3.JH575754 502064 2 - 2150887 GA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536970 202 + 83067054 I e mm10.chr1 111856930 0 + 195471971 C e proCoq1.NW_012148742v1 1277102 10 - 1406956 I a score=414403.000000 s hg38.chr18_GL383571v1_alt 153930 29 + 198278 AAG-AACAAAAATAAGAGTAGAAGCTATTT s panTro5.chr18 65063801 29 + 78221452 AAG-AACAAAAATAAGAGTAGAAGCTATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182863 29 + 77229886 AAG-AACAAAAATAAGAGTAGAAGCTATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402365 29 + 17472758 AAG-AACAAAAATAAGAGTAGAAGCTATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442847 29 - 152096393 AAG-AACAAAAATAAGAGTAGAAGCTACTT i nomLeu3.chr4 I 5 C 0 s rheMac8.chr18 57392873 29 + 70235451 AAG-AACAAAAATAAGAGTAGAAGCTACTT i rheMac8.chr18 I 5 C 0 s macFas5.chr18 63084284 29 - 75711847 AAG-AACAAAAATAAGAGTAGAAGCTACTT i macFas5.chr18 I 5 C 0 s macNem1.NW_012016688v1 13643492 29 - 18804593 AAG-AACAAAAATAAGAGTAGAAGCTACTT i macNem1.NW_012016688v1 I 5 C 0 s cerAty1.NW_012001075v1 13255346 29 + 18905526 AAG-AACAAAAATAAGAGTAGAAGCTACTT i cerAty1.NW_012001075v1 I 5 C 0 s chlSab2.chr18 60083646 29 - 72318688 AAG-AACAAAAATAAGAGTAGAAGCTACTT i chlSab2.chr18 I 5 C 0 s manLeu1.NW_012106698v1 420713 29 - 1517660 AAG-AACAAAAATAAGAGTAGAAGCTACTT i manLeu1.NW_012106698v1 I 5 C 0 s colAng1.NW_012115433v1 3516827 29 + 6513552 AAG-AACAAAAATAAGAGTAGAAGCTACTT i colAng1.NW_012115433v1 I 5 C 0 s calJac3.chr13 105286861 29 + 117903854 AAG-AACAAAAATAAGAGTAGAAGCTATTT i calJac3.chr13 I 5 C 0 s saiBol1.JH378121 19474379 30 - 31320352 AAGAAAAAAAAATAAGAGTAGAAGCTATTT i saiBol1.JH378121 I 5 C 0 s cebCap1.NW_016107689v1 1669687 29 + 2203405 AAG-AACAAAAATAAGAGTAGAAGCTATTT i cebCap1.NW_016107689v1 I 5 C 0 s aotNan1.NW_018502140v1 3622237 29 - 14941987 ATG-AACAAAAATAAGAGTAGAAGCTATTT i aotNan1.NW_018502140v1 I 5 C 0 s proCoq1.NW_012148742v1 1277112 29 - 1406956 AAG-AACAAAAATAAGGGTAGAGGCTATTT i proCoq1.NW_012148742v1 I 10 I 69 s otoGar3.GL873546 11248658 29 - 20685099 CAG-AACAAAAATAAGGGAAGGGGTTATTT i otoGar3.GL873546 I 9 C 0 s mm10.chr1 111856930 24 + 195471971 ------TGGTAATAAGTTTAGACACTATTC i mm10.chr1 C 0 C 0 s canFam3.chr1 112327377 29 - 122678785 AAG-AATAAAATTAAGTGTGGAGACTTTTT i canFam3.chr1 I 8 C 0 s dasNov3.JH575754 502066 24 - 2150887 AAG-AACAAAAGTA----TAGAGGCTACT- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536970 202 + 83067054 I a score=903114.000000 s hg38.chr18_GL383571v1_alt 153959 86 + 198278 AAAATTTTCCTA----GAT----CACCCTAAGGGTGCAGGACCTGGGAACATGCTGGGAGAGTCAATCCCCTTAGGAATTCTGTTTCTAAGGCA s panTro5.chr18 65063830 86 + 78221452 AAAATTTTCCTA----GAT----CACCCTAAGGGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTTAGGAATTCAGTTTCTAAGGCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182892 86 + 77229886 AAAATTTTCCTA----GAT----CACCCTAAGGGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTTAGGAATTCAGTTTCTAAGGCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402394 86 + 17472758 AAAATTTTCCTA----GAT----CACCCTAAGGGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTTAGGAATTCAGTCTCTAAGGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442876 86 - 152096393 AAAATTTTCCTA----GAT----CACCGTAAGGGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTTAGGACTTCAGTTTCTATGGCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392902 86 + 70235451 AAAATTTTCCTA----GAT----CACCCTAAGAGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTGGGGAATTCAGTTTCTAAGGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084313 86 - 75711847 AAAATTTTCCTA----GAT----CACCCTAAGAGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTGGGGAATTCAGTTTCTAAGGCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643521 86 - 18804593 AAAATTTTCCTA----GAT----CACCCTAAGAGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTGGGGAATTCAGTTTCTAAGGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255375 86 + 18905526 AAAATTTTCCTA----GAT----CACCCTAAGAGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTGGAGAATTCAGTTTCTAAGGCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083675 86 - 72318688 AAAATTTTCCTA----GAT----CACCCTAAGAGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTGGGGAATTCAGTTTCTAAGGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420742 86 - 1517660 AAAATTTTCCTA----GAT----CACCCTAAGAGTACAGGACCTGGGAATGTGCTGGGAGAGTCAATCCCCTGGGGAATTCAGTTTCTAAGGCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516856 86 + 6513552 AAAACTTTCCTA----GAT----CACCCTAAGAGTGCAGGACCTGGGAATGTGCTGGGAGAGTCAATTCCCTGGGGAATTCAGTTTCTAAGGCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286890 84 + 117903854 AAAATTCTCCTA----GAT----CACCTTAA--GTGCAGGACCTGGGAATGTGCTGGGACAGTCAGTACCCTTAGGAATTCAGTTTCTAAGGCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474409 84 - 31320352 AAAATTCTCCTA----CAT----CACCCTAA--GCGCAGGACCTGGGAATGTGCTGGGACAGTCAGTACCCTTAGGAATTCAGTTAAAAAGGCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669716 84 + 2203405 AAAATTCTCCTA----GAT----CACCCTAC--GTGCAGGACCTGGGAATGTGCTGGGACAGTCAGTACCCTTAGGGATTCAGTTTCTAAGGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622266 84 - 14941987 AAAATTCTCCTA----GAT----CACCCTAA--GTGCAGGACCTGGGAATGTGCTGGGACAGTCAGTACCCTTAGGAATTCAGTTTCTAAGGCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11248687 68 - 20685099 GCATTTCTCCAA----GAT----CAC---------------CCTGGGAATG---TGGGACAATCCGTTCTCCTACGTATTCACATTATAAGGCA i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111856954 55 + 195471971 AGAATT---------------------------------------AAGATGTGCCAAAAGTGTCACTCACCTTAAGTAGTCAAATTGTAAGGCA i mm10.chr1 C 0 I 1 s canFam3.chr1 112327406 82 - 122678785 -GAATTTTTCTG----GATCTAACACCCTAAGGATGCAGGACCTGG--ATATTCTGGG--TGCCAGTCAACTCAGGCATTAG---TATAAGGCA i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 502090 68 - 2150887 AGAATTTTCCTACGGTTAA----CACCCTGAAAGTCCAGGACTTTGG-ATGATCTG----AGTCAATGGACAAAGAG----------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536970 202 + 83067054 I e proCoq1.NW_012148742v1 1277141 69 - 1406956 I a score=1155800.000000 s hg38.chr18_GL383571v1_alt 154045 99 + 198278 GGGGTCTCAGGCACCATCACATGCATACATACCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GAACAATCTGTGAGTGGACGCT s panTro5.chr18 65063916 99 + 78221452 GGGGTCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GAACAATCTGTGAGTAGACGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64182978 99 + 77229886 GGGGTCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GAACAATCTGTGAGTAGACGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402480 99 + 17472758 GGGGTCTCAGGCACCATCACACGCATACATAGCCAATGGATGTGTCATCCGCTCACCCATACGTAACATTCCTTACA-GAACAATCTGTGAGTAGACGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139442962 99 - 152096393 GGGGTCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTTACCCATACATAACATTCCTTACA-GAACAATCTGTGAGTAGACGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57392988 99 + 70235451 GGGATCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084399 99 - 75711847 GGGATCTCAGGCACCATCACATGCATACATATCCAAAGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643607 99 - 18804593 GGGATCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255461 99 + 18905526 GGGATCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083761 99 - 72318688 GGGATCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420828 99 - 1517660 GGGATCTCAGGCACCATCACATGCATACATAGCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3516942 99 + 6513552 GGGATCTCAGGCACCATCACATGCATACATATCCAATGGATGTGTCACCCGCTCACCCATACATAACATTCCTTACA-GGACAATCTGTGAGTAGACGCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105286974 99 + 117903854 GGGGTCTCAGGCAGGATAACATGCATGCATATCCAATGGATGTGTCACCCCCTAACCCACACATAACATTTCTTACA-GGAGAATCTGTGAGTAGATGCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474493 99 - 31320352 GGGGTCTCAGGCAGGATCACATGCATACATATCCAATGGATGTGTCACCCCCTAACCCATACATAACATTTCTTATA-GGAGAATCTGTGAGTAGATGCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669800 99 + 2203405 GGGGTCTCAGGCAGGATCACATACATGTATATCCAATGGATGTGTCAACCCCTAACCCATACATAACATTTCTTATA-GGAGAATCTGTGAGTAGATGCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622350 99 - 14941987 GGGGTCTCAGGCAGGATCAAATGCATGCATATCCAATGGATGCGTCACCCCCTAACCCATACATAACATTTCTTATA-GGAGAATCTGTGAGTAGATGCT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1277210 99 - 1406956 GGGGTCTCAGGCAAGATCACATGCATGTATATCCAATGGATATATCATCCCCTCACCCATATCTAACATTCTTCACA-GGGAAATCTATAAATAGAAGTG i proCoq1.NW_012148742v1 I 69 C 0 s otoGar3.GL873546 11248756 90 - 20685099 GTGGTCTCAGGCAAGCTCTTACATATGCAT---------ATGTGGCTCCCTCCCACCCATACCTAATATTCCTCACA-GGGAAATCTATATATAGAAGTG i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111857010 75 + 195471971 CAGGGCTCAGGCA------TATGCAGGCAAATTAATTTGAT-------CCCTTTCCGCATACA----ATACCTCTCG-AGGGGATTTGCAGTC------- i mm10.chr1 I 1 C 0 s canFam3.chr1 112327489 95 - 122678785 GGGGTCCCAAGCATGAACATTTGCGTGCAGATCCAATGGCTGGGTCATCC-CTCACCCAT----CACATTCCTCACGTGGGAAATCTGTAAATAGAGGTC i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 502158 14 - 2150887 GGGAGAGTGGGCAC-------------------------------------------------------------------------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41536970 202 + 83067054 I a score=1903326.000000 s hg38.chr18_GL383571v1_alt 154144 141 + 198278 TTCTCCAGCAAACTTTCTATTTTAGAA-TAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAGTACAGAAACAAGTAAATACAACTCTGCATTGCCATGTGGGGGTGAAAGCTGGGATACA s panTro5.chr18 65064015 141 + 78221452 TTCTCCAGCAAACTTTCTATTTTAGAA-TAACTAAACAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAGTACAGAAACAAGTAAATACAACTCTGCATTGCCATGTGGGGGTGAAAGCTGGGATACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183077 141 + 77229886 TTCTCCAGCAAACTTTCTATTTTAGAA-TAACTAAACAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAGTACAGAAACAAGTAAATACAATTCTGCATTGCCATGTGGGGGTGAAAGCTGGGATACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402579 141 + 17472758 TTCTCCAGCAAACTTTCTATTTTAGAA-TAACTAAATAATAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAGTACAGAAACAAGTAAATACAACTCTGCATTGCCATGTGGGGGTGAAAGCTGGGATACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443061 142 - 152096393 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAGTACAGAAACAAGTAAATACAACTCTGCATTGCCATGTGGGGGTAAAAGCTGGGATACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393087 140 + 70235451 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAATACAGAAACAGGCAAATACAA--CTGCATTGCCACGTGGGAGTGAAAGCTAGGATACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084498 140 - 75711847 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAATACAGAAACAGGCAAATACAA--CTGCATTGCCACGTGGGAGTGAAAGCTAGGATACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643706 140 - 18804593 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAATACAGAAACAGGCAAATACAA--CTGCATTGCCACGTGGGAGTGAAAGCTAGGATACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255560 140 + 18905526 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGCAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAATACAGAAACAGGCAAATACAA--CTGCATTGCCACGTGGGAGTGAAAGCTAGGATACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60083860 140 - 72318688 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GTGAATACACAAACAGGCAAATACAA--CTGCATTGCCACGTGGGAGTGAAAGCTAGGATACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 420927 140 - 1517660 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGAGGTG-GGAGTAG-GTGAATACAGAAACAGGCAAATACAA--CTGCATTGCCACGTGGGAGTGAAAGCTAGGATACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517041 140 + 6513552 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAGGGTTCATGTCTAAAATTTTCCCTTGGGGTG-GGAGTAG-GGGAATACAGAAACAGGCAAATACAA--CTGCATTGCCACATGGGGGTGAAAGCTAGGATACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287073 141 + 117903854 TTCTCCAGAAAACTTCCTATTTTAGAATTAACTAAATAGTAAGATGCATGTCTAAAATTTTCCCTTGGGATG-GGAGTAG-GT-AATATAGAAACAGGCAAATACAACTCTGCGTTGCCATATGGGGGTGAAACCTGGAATACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474592 141 - 31320352 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAAGATGTATGTCCAAAATTTTCCCTTGGGATG-TGAGTAG-GT-AATATAGAAACAGGCAAATACAACTCTGCATTGCCATGTGGGGGTGAAACCTGGGATACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1669899 141 + 2203405 TTCTCCAACAAACTTGCTATTTTAGAATTAGCTAAATAGTGAGATGCATGTCCAAAATTTTCCCTTGGGATG-GGAGTAG-GT-AAGAGAGAAACAGGCAAATACAACTCTGCATTGCCATGTGGGGGTGAAACCTGGGATACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622449 142 - 14941987 TTCTCCAGCAAACTTTCTATTTTAGAATTAACTAAATAGTAAGATGCATGTCTAAAATTTTTCCTTGGGATG-GGAGTAG-GTGAATATAGAAACGGGCAAATACAACTCTGCATTGCCATGTGGGGGTGAAACCTGGGATACA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537172 142 + 83067054 TTCTCCAGCAAACTTACTATTTTAGAATTAACCACATACTAGGGCTCATGTCTGAAATTTTCCCTTGAAGTG-GGAGTAG-GTGAGTACAGAGACAAGTACATTCAATTTCACATTGCTATGTGGCCATGAAAGTTAGGATACA i micMur3.chr19 I 202 C 0 s proCoq1.NW_012148742v1 1277309 142 - 1406956 TTCTCTAGAAAACTTACTATTTTAGAATTAACCACATAGTAGGGGTCATGTCTGAAATTTTCCCTTGAAGTG-GGAGTGG-GTGAGTACAGACATAGGTAAATTCAATTTCGCATTGGTATGTGGGCATGAAAGTTAGGATACA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11248846 141 - 20685099 TTCTCCAGTAAACTTCCTATTTTAGAATTAACTACATAATAGGGCTTATGTCTGAAATTTTCCCTTGGAGGGTGGGATAG-GTTTGTATAGAGACTGGTAAATCCAACTT--TATTGCTATGTGGGCATGAATGTTAGGAAACG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857085 114 + 195471971 TTCTTCAGA----TGTTCATTATGGAAAAAACTAAGAAA-AGGGCTCATGTCT-CACTTTTACTTTAGAGTA-GGA-----------------------AAGTTTAGATCTGTATTGCTCTGTGAAGCTGAAAGCTAGGATTTC i mm10.chr1 C 0 C 0 s canFam3.chr1 112327584 93 - 122678785 TCTTCCAGCAAAC---------------------------------------------TTTCCCTTGGGGTG-CAGGTGG-GCAAGGACAGTGCCAGGGAGACTCACCTTAGCATTGCTGTGTGGGGGTGAAA----GGACACA i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 502172 87 - 2150887 -------------------------------------------------ATCTGAAATTTTCCCTTGTAGCA-AGAGTAATGTGGGTATGAAAACAGGGAAA-------CTGCACTACTACGTGGGATTTAAAGTTAGGATACA i dasNov3.JH575754 C 0 C 0 a score=37338.000000 s hg38.chr18_GL383571v1_alt 154285 3 + 198278 -TTG s panTro5.chr18 65064156 3 + 78221452 -TTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183218 3 + 77229886 -TTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402720 3 + 17472758 -TTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443203 3 - 152096393 -TTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393227 3 + 70235451 -TTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084638 3 - 75711847 -TTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643846 3 - 18804593 -TTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255700 3 + 18905526 -TTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084000 3 - 72318688 -TTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421067 3 - 1517660 -TTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517181 3 + 6513552 -TTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287214 3 + 117903854 -TTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474733 3 - 31320352 -TTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670040 3 + 2203405 -TTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622591 3 - 14941987 -TTG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537314 3 + 83067054 -CTG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1277451 3 - 1406956 -CTG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11248987 3 - 20685099 -CTG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857199 3 + 195471971 -CTG i mm10.chr1 C 0 C 0 s dasNov3.JH575754 502259 3 - 2150887 CTC- i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112327677 3 - 122678785 I a score=973057.000000 s hg38.chr18_GL383571v1_alt 154288 69 + 198278 TAAAGATCATTTTCGTAAGCCTGTACCTTTCTTTTGCTATCAATGACGTGTTCCcatattcattctcag s panTro5.chr18 65064159 69 + 78221452 TAAAGATCATTTTCGTAAGCCTGTACCTTTCTTTTGCTATCAATGACATGTTCCcatattcattctcaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183221 69 + 77229886 TAAAGATCATTTTCGTAAGCCTGTACCTTTCTTTTGCTATCAATGACATGTTCCcatattcattctcaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402723 69 + 17472758 TAAAGATCATTTTCGTAAGCCTGTACCTTTCTTTTGCTATCAATGACATGTTCCcatattcattctcaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443206 69 - 152096393 TAAAGATCATTTTGGTAAGCCTGTACCTTCCTTTTGCTATCAATGATATGTTCCcatattcattctcaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393230 69 + 70235451 TAAAGATCGTTTTGGTAAGCCTGTACCTTTATTTTGCTCTCAATGGCATGTTCCCATATTCATTCTCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084641 69 - 75711847 TAAAGATCGTTTTGGTAAGCCTGTACCTTTATTTTGCTCTCAATGGCATGTTCCCATATTCATTCTCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643849 69 - 18804593 TAAAGATCGTTTTGGTAAGCCTGTACCTTTATTTTGCTCTCAATGGCATGTTCCCATATTCATTCTCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255703 69 + 18905526 TAAAGATCGTTTTGGTAAGCCTGTACCTTTATTTTGCTCTCAATGGCATGTTCCCATATTCATTCTCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084003 69 - 72318688 TAAAGATCGTTTTGGTAAGCCTGTACTTTTATTTTGCTCTCAATGGCATGTTCCCATATTCATTCTCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421070 69 - 1517660 TAAAGATCATTTTGGTAAGCCTGTACCTTTATTTTGCTCTCAATGGCATGTTCCCATATTCATTCTCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517184 69 + 6513552 TAAAGATCGTTTTGGTAAGCCTGTACCTTTATTTTGCTCTCAATGGCATGTTCCCATACTCATTCTCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287217 69 + 117903854 TAAAGATCATCTGGGTAAGCCTGTACCTTTCTTTTGCTATCAAAAACATGTCCCCATATTCATTCTCAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474736 69 - 31320352 TAAAGATCATTTTGGTAAGCCTGTACCTACCTTTTGCTATCAATAACATGTCCCCATATTCATTCTCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670043 69 + 2203405 TAAAGATCATTTTGGTAAGCCTGTACCTATCTTTTGCAGTCAATAACATGTCCCCATATTCATTCTCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622594 69 - 14941987 TAAAGATCATTTTGGTAAGCCTGTACCTTTCTTTTGCTATCAATAACATGTCCCcatattcattctcaa i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537317 69 + 83067054 TGAAGATAATTTTGGGAAGCCTTTACTTTTCTTTTGCTATCAATAGCATGTTCCCATAATCATTCTCAG i micMur3.chr19 C 0 I 139 s proCoq1.NW_012148742v1 1277454 69 - 1406956 TGAAGATAATTTTTGGAAGCCTCTACCTTTCTTTTGCTATCAATAACATGTTCTCATAATCATTCTCAG i proCoq1.NW_012148742v1 C 0 I 109 s otoGar3.GL873546 11248990 68 - 20685099 TGAAGAAAATTTGGGGAAGCCTCAACCTTTCTTCTGCGATCCATACCTTCTTC-CATAATCATTCCCAG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857202 37 + 195471971 T----------------------------TATTTT----TCAGTAAAAGATTTCCATATTCGATCTCAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112327680 68 - 122678785 TGAAGAACATTTTGGTAAATCTGTCCCTTTCTTTAGCTATCAATAACATGCCCCCGCA-TCATTCACAC i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 502262 69 - 2150887 TGGACATGACTTTGGTAGGCATGCACCTTTCTGTGTCTACCATGTTTTACTTGTCTTATACATTCTCAG i dasNov3.JH575754 C 0 C 0 a score=260950.000000 s hg38.chr18_GL383571v1_alt 154357 27 + 198278 tgtaactcattttctttttcattttcT s panTro5.chr18 65064228 27 + 78221452 tgtaactcattttctttttcattttcT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183290 27 + 77229886 tgtaactcattttctttttcattttcT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402792 27 + 17472758 tgtaactcattttctttttcattttcT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443275 27 - 152096393 tgtaactcattttctttttcattttcT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393299 25 + 70235451 TGTAACTCATTT--TTTTTCATTTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084710 25 - 75711847 TGTAACTCATTT--TTTTTCATTTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643918 25 - 18804593 TGTAACTCATTT--TTTTTCATTTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255772 25 + 18905526 TGTAACTCATTT--TTTTTCATTTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084072 25 - 72318688 TGTAACTCATTT--TTTTTCATTTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421139 25 - 1517660 TGTAACTCATTT--TTTTTCATTTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517253 25 + 6513552 TGTAACTCATTT--TTTTTCATTTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287286 27 + 117903854 TGTAACTCACTTTCTTTTTCATTTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474805 27 - 31320352 TGTAACTCATTCTCTTTTTCATTTTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670112 27 + 2203405 TGTAACTCACTCTCTTTTTCATTTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622663 27 - 14941987 tgtaactcattttctttttcattttcT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11249058 27 - 20685099 AATCAATCACTGTCTTTCTCACTTTCT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857239 19 + 195471971 ---AAATTACAC-----TTTATTTTCT i mm10.chr1 C 0 C 0 s canFam3.chr1 112327748 21 - 122678785 ----AGCTATTC--TTTATTGTTTTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 502331 23 - 2150887 ----AATTATTCTCCATTCCACCCACA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I a score=411349.000000 s hg38.chr18_GL383571v1_alt 154384 36 + 198278 GTAACTCTTCTTTCCCTATTACTCCACATACTCCAT s panTro5.chr18 65064255 36 + 78221452 GTAACTCTTCTTTCCCTATTACTCCACATACTCCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183317 36 + 77229886 GTAACTCTTCTTTCCCTATTACTCCACATACTCCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402819 36 + 17472758 GTAACTCTTCTTTCCCTATTACTCCACATACTCCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443302 36 - 152096393 ATAACTCTTCTTCCCCTATTACTCCACATACTCCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393324 36 + 70235451 GTTACTCTTCTTCCCCTATTACTCTACATACTCCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084735 36 - 75711847 GTTACTCTTCTTCCCCTATTACTCTACATACTCCAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643943 36 - 18804593 GTTACTCTTCTTCCCCTATTACTCTACATACTCCAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255797 36 + 18905526 GTTACTCTTCTTCCCCTATTACTCTACATACTCCAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084097 36 - 72318688 GTTACTCTTCTTCCTCTATTACTCTACATACTCCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421164 36 - 1517660 GTTACTCTTCTTCCCCTATTACTCTACATACTCCAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517278 36 + 6513552 GTTACTCTTCTTCCCCTATTACTCCACACACTCCAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287313 36 + 117903854 GTAATTCTTCTTCCCCTATTACTCCACACACTCCAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474832 36 - 31320352 GTATTTCTTCTTCCCCTATTACTCCACACACTCCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670139 36 + 2203405 GTAATTCTTCTTCCCCTATTACTCCACACACTCCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622690 35 - 14941987 GTAATTCTTCTTCCCCTATTACTCCACACACTCCA- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111857258 36 + 195471971 AAATCTCTTCTTTCCTTTTTCCTCCATATAACCCAT i mm10.chr1 C 0 I 16 s canFam3.chr1 112327769 33 - 122678785 ---CCACCTCTGCTCGGATTCCTCCCCATACTCAAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 502354 36 - 2150887 CTCATTTCTTCTCCCCTATCCCCTCACATACCCAAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e otoGar3.GL873546 11249085 0 - 20685099 C a score=163599.000000 s hg38.chr18_GL383571v1_alt 154420 13 + 198278 CTGGCCTTCTCCT s panTro5.chr18 65064291 13 + 78221452 CTGGCCTTCTCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183353 13 + 77229886 CTGGCCTTCTCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402855 13 + 17472758 CTGGCCTTCTCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443338 13 - 152096393 CTGGCCTTCTCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393360 13 + 70235451 TTGGCCTTCTCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084771 13 - 75711847 TTGGCCTTCTCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643979 13 - 18804593 TTGGCCTTCTCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255833 13 + 18905526 TTGGCCTTCTCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084133 13 - 72318688 TTGGCCTTCTCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421200 13 - 1517660 TTGGCCTTCTCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517314 13 + 6513552 TTGGCCTTCTCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287349 13 + 117903854 CTGGCCTTCTCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474868 13 - 31320352 CTGGCCTTCTCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670175 13 + 2203405 CTGGCCTTCTCCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622725 13 - 14941987 CTGGACTTCTCCT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112327802 13 - 122678785 CTGGTTCCCTCCT i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 502390 13 - 2150887 CTGGCTCTCTTCT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e otoGar3.GL873546 11249085 0 - 20685099 C a score=7397.000000 s hg38.chr18_GL383571v1_alt 154433 1 + 198278 G s panTro5.chr18 65064304 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183366 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402868 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443351 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393373 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643992 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255846 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084146 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421213 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517327 1 + 6513552 G i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1670188 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 I 7 s aotNan1.NW_018502140v1 3622738 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 502403 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e calJac3.chr13 105287362 0 + 117903854 C e canFam3.chr1 112327815 1 - 122678785 I e otoGar3.GL873546 11249085 0 - 20685099 C e saiBol1.JH378121 19474881 0 - 31320352 C e macFas5.chr18 63084784 0 - 75711847 C a score=16497.000000 s hg38.chr18_GL383571v1_alt 154434 2 + 198278 CC s panTro5.chr18 65064305 2 + 78221452 CC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183367 2 + 77229886 CC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402869 2 + 17472758 CC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443352 2 - 152096393 CC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393374 2 + 70235451 CC i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643993 2 - 18804593 CC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255847 2 + 18905526 CC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084147 2 - 72318688 CC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421214 2 - 1517660 CC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517328 2 + 6513552 CC i colAng1.NW_012115433v1 C 0 C 0 s aotNan1.NW_018502140v1 3622739 2 - 14941987 CC i aotNan1.NW_018502140v1 C 0 I 5 s canFam3.chr1 112327816 2 - 122678785 CC i canFam3.chr1 I 1 I 9 s dasNov3.JH575754 502404 2 - 2150887 TC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e calJac3.chr13 105287362 0 + 117903854 C e otoGar3.GL873546 11249085 0 - 20685099 C e cebCap1.NW_016107689v1 1670189 7 + 2203405 I e saiBol1.JH378121 19474881 0 - 31320352 C e macFas5.chr18 63084784 0 - 75711847 C a score=-7040.000000 s hg38.chr18_GL383571v1_alt 154436 1 + 198278 -A s panTro5.chr18 65064307 1 + 78221452 -A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183369 1 + 77229886 -A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402871 1 + 17472758 -A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443354 1 - 152096393 -A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393376 1 + 70235451 -T i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643995 1 - 18804593 -T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255849 1 + 18905526 -T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084149 1 - 72318688 -T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421216 1 - 1517660 -T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517330 1 + 6513552 -C i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 502406 1 - 2150887 G- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e calJac3.chr13 105287362 0 + 117903854 C e canFam3.chr1 112327818 9 - 122678785 I e otoGar3.GL873546 11249085 0 - 20685099 C e aotNan1.NW_018502140v1 3622741 5 - 14941987 I e cebCap1.NW_016107689v1 1670189 7 + 2203405 I e saiBol1.JH378121 19474881 0 - 31320352 C e macFas5.chr18 63084784 0 - 75711847 C a score=5730.000000 s hg38.chr18_GL383571v1_alt 154437 4 + 198278 ACAG s panTro5.chr18 65064308 4 + 78221452 ACAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183370 4 + 77229886 ACAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402872 4 + 17472758 ACAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443355 4 - 152096393 ACAG i nomLeu3.chr4 C 0 C 0 s dasNov3.JH575754 502407 4 - 2150887 ACAG i dasNov3.JH575754 C 0 I 217 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e calJac3.chr13 105287362 0 + 117903854 C e canFam3.chr1 112327818 9 - 122678785 I e otoGar3.GL873546 11249085 0 - 20685099 C e aotNan1.NW_018502140v1 3622741 5 - 14941987 I e cebCap1.NW_016107689v1 1670189 7 + 2203405 I e saiBol1.JH378121 19474881 0 - 31320352 C e colAng1.NW_012115433v1 3517331 0 + 6513552 C e manLeu1.NW_012106698v1 421217 0 - 1517660 C e chlSab2.chr18 60084150 0 - 72318688 C e cerAty1.NW_012001075v1 13255850 0 + 18905526 C e macNem1.NW_012016688v1 13643996 0 - 18804593 C e macFas5.chr18 63084784 0 - 75711847 C e rheMac8.chr18 57393377 0 + 70235451 C a score=64838.000000 s hg38.chr18_GL383571v1_alt 154441 76 + 198278 GTACAtttcttttt---------------ttcttttttttttttttttgaggcggagtctcgctctgtcgcccaggctggagtgcagtggc s panTro5.chr18 65064312 91 + 78221452 GTACATTTCtttttctttttcttttcttttttttttttttttttttttgaggcggagtctcgctctgtcgcccaggctggagtgcagtggc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183374 79 + 77229886 GTACATttctttttctt------------tttctttctttttttttttgaggcggagtctcgctctgtcgcccaggctggagtgcagtggc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402876 84 + 17472758 GTACATTTCTTtttcttttctt-------tctttttttttttttttttgaggcggagtctcgctctgtcgcccaggctggagtgcagtggc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443359 87 - 152096393 GTACATTTCTTTTTCtttcttttct----tttttttttttttttttttgaggtggagtctcgctctgtcacccaggctggagcgcagtggc i nomLeu3.chr4 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e calJac3.chr13 105287362 0 + 117903854 C e dasNov3.JH575754 502411 217 - 2150887 I e canFam3.chr1 112327818 9 - 122678785 I e otoGar3.GL873546 11249085 0 - 20685099 C e aotNan1.NW_018502140v1 3622741 5 - 14941987 I e cebCap1.NW_016107689v1 1670189 7 + 2203405 I e saiBol1.JH378121 19474881 0 - 31320352 C e colAng1.NW_012115433v1 3517331 0 + 6513552 C e manLeu1.NW_012106698v1 421217 0 - 1517660 C e chlSab2.chr18 60084150 0 - 72318688 C e cerAty1.NW_012001075v1 13255850 0 + 18905526 C e macNem1.NW_012016688v1 13643996 0 - 18804593 C e macFas5.chr18 63084784 0 - 75711847 C e rheMac8.chr18 57393377 0 + 70235451 C a score=179343.000000 s hg38.chr18_GL383571v1_alt 154517 243 + 198278 gcatctccactcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccgtgtagctgggactacaggtgcccgccaccacgcccggctaa-ttttttgtacttttttttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccgaagtgctgggattacaggcgtgagccactgcacccggcc s panTro5.chr18 65064403 240 + 78221452 gcatctccactcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccgcgtagctggggctacaggtgcccgccaccacgcccggctaa-ttttttgtacttttttt---agtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacccacctcagcctcccgaagtgctgggattacaggcgtgagccactgcacccggcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183453 240 + 77229886 gcatctccactcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccgcgtagctggggctacaggtgcccgccaccacgcccggctaa-ttttttgtacttttttt---agtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcagcctcccgaagtgctgggattacaggcgtgagccactgcacccggcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5402960 240 + 17472758 gcatctccactcactgcaagctctgccgcccaggttcatgccattctcctgcctcagcctcccgcgtagctgggactacaggtgcccgccaccacacccggctaa-ttttttgtacttttttt--tagtagagatggggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccactcgcctcggcctcccgaagtgct-ggattacaggcgtgagccactgcacccggcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443446 237 - 152096393 gcatctt--gtcactgcaagctccgcctcccgggttcatgccattctcctgtctcagcctcccacgtagctgggactacaggcgcccgccaccacggccggctaatttttttgtatttttttt--tagtaaagatggggtttcaccgtgttagccaggatggtcttgat---ctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagccacagcgcccggcT i nomLeu3.chr4 C 0 C 0 s otoGar3.GL873546 11249085 53 - 20685099 GCATC------------------------------------------------------------------------------GCCCCCCACCCCG--------A-------------TTCCT---------------------CCGCAT-------------------------------------ACTCGACTTGGCTCTC----------------------------------CCCGGCC i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e calJac3.chr13 105287362 0 + 117903854 C e dasNov3.JH575754 502411 217 - 2150887 I e canFam3.chr1 112327818 9 - 122678785 I e aotNan1.NW_018502140v1 3622741 5 - 14941987 I e cebCap1.NW_016107689v1 1670189 7 + 2203405 I e saiBol1.JH378121 19474881 0 - 31320352 C e colAng1.NW_012115433v1 3517331 0 + 6513552 C e manLeu1.NW_012106698v1 421217 0 - 1517660 C e chlSab2.chr18 60084150 0 - 72318688 C e cerAty1.NW_012001075v1 13255850 0 + 18905526 C e macNem1.NW_012016688v1 13643996 0 - 18804593 C e macFas5.chr18 63084784 0 - 75711847 C e rheMac8.chr18 57393377 0 + 70235451 C a score=73.000000 s hg38.chr18_GL383571v1_alt 154760 4 + 198278 ---GCCA s panTro5.chr18 65064643 4 + 78221452 ---GCCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183693 4 + 77229886 ---GCCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403200 3 + 17472758 ---G-CA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443683 4 - 152096393 ---GCCA i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63084784 4 - 75711847 ---GCCT i macFas5.chr18 C 0 C 0 s calJac3.chr13 105287362 4 + 117903854 ---GCCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474881 4 - 31320352 ---GCCC i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11249138 4 - 20685099 ATGG--- i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e mm10.chr1 111857294 16 + 195471971 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e dasNov3.JH575754 502411 217 - 2150887 I e canFam3.chr1 112327818 9 - 122678785 I e aotNan1.NW_018502140v1 3622741 5 - 14941987 I e cebCap1.NW_016107689v1 1670189 7 + 2203405 I e colAng1.NW_012115433v1 3517331 0 + 6513552 C e manLeu1.NW_012106698v1 421217 0 - 1517660 C e chlSab2.chr18 60084150 0 - 72318688 C e cerAty1.NW_012001075v1 13255850 0 + 18905526 C e macNem1.NW_012016688v1 13643996 0 - 18804593 C e rheMac8.chr18 57393377 0 + 70235451 C a score=22931.000000 s hg38.chr18_GL383571v1_alt 154764 4 + 198278 ACAG s panTro5.chr18 65064647 4 + 78221452 ACAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183697 4 + 77229886 ACAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403203 4 + 17472758 ACAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443687 4 - 152096393 ACAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393377 4 + 70235451 ACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084788 4 - 75711847 ACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13643996 4 - 18804593 ACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255850 4 + 18905526 ACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084150 4 - 72318688 ACAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421217 4 - 1517660 ACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517331 4 + 6513552 ACAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287366 4 + 117903854 ATAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474885 4 - 31320352 ATGA i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11249142 1 - 20685099 A--- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857310 4 + 195471971 ATAG i mm10.chr1 I 16 C 0 e micMur3.chr19 41537386 139 + 83067054 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e dasNov3.JH575754 502411 217 - 2150887 I e canFam3.chr1 112327818 9 - 122678785 I e aotNan1.NW_018502140v1 3622741 5 - 14941987 I e cebCap1.NW_016107689v1 1670189 7 + 2203405 I a score=148632.000000 s hg38.chr18_GL383571v1_alt 154768 14 + 198278 GTACATTTCTGTAT s panTro5.chr18 65064651 14 + 78221452 GTACATTTCTGTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183701 14 + 77229886 GTACATTTCTGTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403207 14 + 17472758 GTACATTTCTGTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443691 14 - 152096393 GTACATTTTTGTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393381 14 + 70235451 GTACACTTTTGTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084792 14 - 75711847 GTACACTTTTGTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644000 14 - 18804593 GTACACTTTTGTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255854 14 + 18905526 GTACACTTTTGTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084154 14 - 72318688 GTACACTTTTGTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421221 14 - 1517660 GTACACTTTTGTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517335 14 + 6513552 GTACACTTCTGTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287370 14 + 117903854 GTACATTTCTGTGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474889 14 - 31320352 GTACATTTCTGTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670196 14 + 2203405 GTACATTTCTGTAT i cebCap1.NW_016107689v1 I 7 C 0 s aotNan1.NW_018502140v1 3622746 14 - 14941987 GTACATTTCTGTAT i aotNan1.NW_018502140v1 I 5 C 0 s otoGar3.GL873546 11249143 14 - 20685099 GGGCATTTCTATAT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857314 8 + 195471971 ATACATTT------ i mm10.chr1 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e dasNov3.JH575754 502411 217 - 2150887 I e canFam3.chr1 112327818 9 - 122678785 I a score=290558.000000 s hg38.chr18_GL383571v1_alt 154782 30 + 198278 TGTCTGTACAATGTTAAAATAAAGGGAACA s panTro5.chr18 65064665 25 + 78221452 TGTCTGTACAATGTTAAA-----GGGAACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183715 30 + 77229886 TGTCTGTACAATGTTAAAATAAAGGGAACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403221 30 + 17472758 TGTCTGTACAATGTTAAAATAAAGGCAACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443705 30 - 152096393 TGTCTGTACAATGTTAAAATAAAGGGAACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393395 30 + 70235451 TGTCTGTACAATGTTAAAATAAAGGAAGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084806 30 - 75711847 TGTCTGTACAATGTTAAAATAAAGGAAGCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644014 30 - 18804593 TGTCTGTACAATGTTAAAATAAAGGAAGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255868 30 + 18905526 TGTCTGTACAATGTTAAAATAAAGGAAGCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084168 30 - 72318688 TGTCTGTACAATGTTAAAATAAAGGAAGCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421235 30 - 1517660 TGTCTGTACAATGTTAAAATAAAGGAAGCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517349 30 + 6513552 TGTCTGCACAATGTTAAAATAAAGGAAGCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287384 30 + 117903854 TGTCTGTACAATGTTAAAATAAAGGCAGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474903 27 - 31320352 TTTCTGTACA---TTAAAATAAAGGCAGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670210 30 + 2203405 TGTCTGTACAACGTTAAAATAAAGGCAGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622760 30 - 14941987 TGTCTGTAAAACGTTAAAATAAAGGCAGTA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11249157 17 - 20685099 ---------AATGTTAAAATTCAGCA---- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857322 27 + 195471971 ---CTGTACAATTTTCAAAGAAAGACAGAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112327827 23 - 122678785 TGTTTCTGCAAAGTTAAAAGGCA------- i canFam3.chr1 I 9 C 0 e micMur3.chr19 41537386 139 + 83067054 I e proCoq1.NW_012148742v1 1277523 109 - 1406956 I e dasNov3.JH575754 502411 217 - 2150887 I a score=269403.000000 s hg38.chr18_GL383571v1_alt 154812 23 + 198278 GTAGTTTCTGCTTTCTTGCTTGC s panTro5.chr18 65064690 23 + 78221452 GTAGTTTCTGCTTTCTTGCTTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183745 23 + 77229886 GTAGTTTCTGCTTTCTTGCTTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403251 23 + 17472758 GTAGTTTCTGCTTTCTTGCTTGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443735 23 - 152096393 GTAGTTTCTGCTTTCTTGTTTGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393425 23 + 70235451 GTGGTTTCTGCTTTCTTGTTTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084836 23 - 75711847 GTAGTTTCTGCTTTCTTGTTTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644044 23 - 18804593 GTAGTTTCTGCTTTCTTGTTTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255898 23 + 18905526 GTAGTTTCTGCTTTCTTGTTTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084198 23 - 72318688 GTAGTTTCTGCTTTCTGGTTTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421265 23 - 1517660 GTAGTTTCTGCTTTCTTGTTTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517379 23 + 6513552 GTAGTTTCTGCTTTCTTGTTTGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287414 23 + 117903854 ATAGTTTCTGCTTTCCTGTTTGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474930 23 - 31320352 ATAGTTTCTGCTTTCTTGTTTGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670240 23 + 2203405 ATAGTTTCTGCTTTCTTGTTTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622790 23 - 14941987 ATAGTTTCTGCTTTCTTGTTTGC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1277632 23 - 1406956 GTAGCTTCTGCTTTCTTCTTTTT i proCoq1.NW_012148742v1 I 109 C 0 s otoGar3.GL873546 11249174 20 - 20685099 GCAGCTTCTGCTTTCTTGTT--- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857349 22 + 195471971 GCAGCTTTCACTGTCCCCCCTG- i mm10.chr1 C 0 C 0 s canFam3.chr1 112327850 12 - 122678785 GTGGTACAGATT----------- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41537386 139 + 83067054 I e dasNov3.JH575754 502411 217 - 2150887 I a score=1841624.000000 s hg38.chr18_GL383571v1_alt 154835 125 + 198278 TACCTGCATG-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTACTGACAATCCAGACTTTTTATATGTGATCTGATTCACGATCACATATCCTAGGAATTGAAAGTAAACACTGAGATTCTG s panTro5.chr18 65064713 125 + 78221452 TACCTGCATG-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTACTGACAATCCAGACTTTTTATATGTGATCTGATTCACGATCACATATCCTAGGAATTGAAAGTAAACACTGAGATTCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183768 124 + 77229886 TACCTGCATG-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTACTGACAATCCAGAC-TTTTATATGTGATCTGATTCACGATCACATATCCTAGGAATTGAAAGTAAACACTGAGATTCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403274 125 + 17472758 TACCTGCATG-CAATTGGAATTCCTACCTTGATCA----GATCTAATACTACTGACAATCCAGACTTTTTATATGTGATCTGATTCACGATCACATATCCTAGGAATTGAAAGTAAACACTGAGATTCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443758 125 - 152096393 TACCTGCACA-CAATTGTAACTCCTACCTTGATCA----GATCTAATACTACTGACAATCCAGACTTTTTATATGTGATCTGATTCACGATCACATATCCTAGGAATTGAAAGTAAACATTGGGATTCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393448 125 + 70235451 TACCTGCACA-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTGCTAACAATCCAGACTTTTTATATGTGATCTGATTCAAGATCACATATCCTAGGAATTGAATGTAAACACTGAGACTCTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084859 125 - 75711847 TACCTGCACA-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTGCTAACAATCCAGACTTTTTATATGTGATCTGATTCAAGATCACATATCCTAGGAATTGAATGTAAACACTGAGACTCTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644067 125 - 18804593 TACCTGCACA-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTGCTAACAATCCAGACTTTTTATATGTGATCTGATTCAAGATCACATATCCTAGGAATTGAGTGTAAACACTGAGACTCTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13255921 125 + 18905526 TACCTGCACA-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTGCTAACAATCCAGACTTTTAATATGTGATCTGATTCAAGATCACATATCCTAGGAATTGAATGTAAACACTGAGACTCTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084221 125 - 72318688 TACCTGCACA-CAATTGTAATTCCTACCTTGATCA----GATCTAATACTGCTGACAATCCAGACTTTTTATATGTGATCTGATTCAAGATCACATATCCTAGGAATTGAATGTAAACACTGAGACTCTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421288 126 - 1517660 TACCTGCACACCAATTGTAATTCCTACCTTGATCA----GATCTAATACTGCTAACAATCCAGACTTTTTATATGTGATCTGATTCAAGATCACATATCCTAGGAATTGAATGGAAACACTGAGACTCTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517402 125 + 6513552 TACCTGCACA-CAATTATAATTCCTACCTTGATCA----GATCTAATACTGCTGACAATCCAGACTTTTTATATGTGACCCGATTCAAGATCACATATCCTAGGAATTGAATGTAAACACTGAGACTCTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287437 125 + 117903854 TACCTGCACA-TAGTTGTAATTCCTACCTTGATCA----GACCTAATACTACTGACAGTCCAGACGTTTTATATGTGATCTGATTCAAGGTCACATATCCTGGAAATTGAAAGTAAACACTGAGACTCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19474953 125 - 31320352 TACCTGCACA-TAGTTGTAATTCCTACCTTGATCA----GACCTAACACTACTGACAGTCCAGATTTTTTATATGTGATCTGATTCAAGGTCACATATCCTGGGAATTGAAAGTAAACACTGAGACTCTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670263 125 + 2203405 TACCTGCACA-TAGTTGTAATTCCTACCTTGATCA----GACCTAATACTACTGACAGTCCAGGCTTTTTATATGTGATCCAATTCAAGGTCACATATCCTGGGAATTGAATGTAAACACTGAGACTCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622813 125 - 14941987 TACCTGCACA-CAGTTGTAATTCCTACCTTGATCA----GACCTAATACTACTGACGGTCCAGACTTTTTATACGTGATCTGATTCAAGGTCACATATCCTGGGAATTGAAATTAAACACTGAGACTCTG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537525 125 + 83067054 TACCTGCACA-CATTTGTAATTCTTACTTTGATCA----GACCTAATACTGCTTCCAAAACAGAGCCTTTTTATTTGATATGATTCAAGATCACACATCCTGGGAATTGAAAGTAAACACAGATACTCTG i micMur3.chr19 I 139 C 0 s proCoq1.NW_012148742v1 1277655 125 - 1406956 TACCTGCACA-CATTTGTAATTCTTACTTTGATCA----GACCTAATACTGCTTCCAAAACAGAGCCTTTTTATTTGATATGATTCAAGATCACACATCTTGGGAATTGAAAGTAAACACTAAGACTCTG i proCoq1.NW_012148742v1 C 0 I 20 s otoGar3.GL873546 11249194 126 - 20685099 -ACCTGCACA-TATTTGCAATTCTTACCATGATCAGACTGACCAAGCATGGCTTCCAATCTAGAACCTTTTTATTTGATCTAATTCAAGACCACACATCCCGAGAATCCAGAGTAAACACTGAGACTG-- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857371 123 + 195471971 TACCTATACC-CGTTTCTAATTAGTACCTTAGTAT----GAAGTACTACT-CTTTCACCCCATCACTTTTCTGTTTGATCTGACTTAAGATCATA-ATTCTGGGAAGTGAAAACAAACAGTGAGACTCCA i mm10.chr1 C 0 C 0 s canFam3.chr1 112327862 122 - 122678785 ---CTGCACA-CATTTGTAATTCTTACCTTGAGCA----GATCTGCTATTACTGCCAACCCAAAGCCTTCTTATTTGATCTGATTTGAGATCACACATCCTGGGAATTGAAAGCAAACACCGACACTATG i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 502411 217 - 2150887 I a score=313974.000000 s hg38.chr18_GL383571v1_alt 154960 23 + 198278 CCCAATAATGGAAATAGTGTTAT s panTro5.chr18 65064838 23 + 78221452 CCCAATAATGGAAATAGTGTTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183892 23 + 77229886 CCCAATAATGGAAATAGTGTTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403399 23 + 17472758 CCCAATAATGGAAATAGTGTTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443883 23 - 152096393 CCCAATAATGGAAATAGTGTTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393573 23 + 70235451 ACCAATAATGAAAATAGTGTTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63084984 23 - 75711847 ACCAATAATGAAAATAGTGTTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644192 23 - 18804593 ACCAATAATGAAAATAGTGTTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13256046 23 + 18905526 ACCAATAATGAAAATAGTGTTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084346 23 - 72318688 ACCAATAATAAAAATAGTGTTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421414 23 - 1517660 ACCAATAATGAAAATAGTGTTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517527 23 + 6513552 ACCAATAATGAAAATAGTGTTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287562 23 + 117903854 ACTAATAATGGAAATCATGTTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19475078 23 - 31320352 ACCAATAATGGAAATAGTGTTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670388 23 + 2203405 ACCAATAATGGAAATAGTGTTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622938 23 - 14941987 ATCAATAACAGAAATAGTGTTAT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537650 23 + 83067054 ATCAATAAAGGAAATATTGTTAT i micMur3.chr19 C 0 I 1 s otoGar3.GL873546 11249320 22 - 20685099 ACCCA-AAAGGAAACATTGTTAC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857494 23 + 195471971 ACTAATAATGGAAATAGCGTTAT i mm10.chr1 C 0 C 0 s canFam3.chr1 112327984 23 - 122678785 ACCAATAATGGAAACAGTGTTCC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1277780 20 - 1406956 I e dasNov3.JH575754 502411 217 - 2150887 I a score=291139.000000 s hg38.chr18_GL383571v1_alt 154983 30 + 198278 CAACCATGTAGCATGCAATATTCATGTAGA s panTro5.chr18 65064861 30 + 78221452 CACCCATGTAGCATGCAATATTCATGTAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183915 30 + 77229886 CACCCACGTAGCATGCAATATTCATGTAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403422 30 + 17472758 CACCCATGTAGCATGCAATATTCATGTAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443906 30 - 152096393 CACCCATATAGCATGCAATATTCATGTAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393596 30 + 70235451 CACCCATGTAGCATGCAATATTCATGTAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63085007 30 - 75711847 CACCCATGTAGCATGCAATATTCATGTAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644215 30 - 18804593 CACCCATGTAGCATGCAATATTCATGTAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13256069 30 + 18905526 CACCCATGTAGCACGCAATATTCATATAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084369 30 - 72318688 CACCCATGTAGCATGCAATATTCATGTAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421437 30 - 1517660 CACCCATGTAGCATGCAATATTCATGTAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517550 30 + 6513552 CACCCATGTAGCATGCAATATTCATGTAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287585 30 + 117903854 CATCCATGTACCATGCAATATTCATGTACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19475101 30 - 31320352 CATCCATGTACCATGCAATATTCATGTACG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670411 30 + 2203405 CGTCCATGTACCATGCAATATGCATGTACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622961 30 - 14941987 CATCCATGTACCATGCAATATTCATGTACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11249342 15 - 20685099 CATGCCTGTAGCAGG--------------- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111857517 13 + 195471971 CATCCAAGTAGCA----------------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112328007 13 - 122678785 CATCCATGGAGCA----------------- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41537673 1 + 83067054 I e proCoq1.NW_012148742v1 1277780 20 - 1406956 I e dasNov3.JH575754 502411 217 - 2150887 I a score=48632.000000 s hg38.chr18_GL383571v1_alt 155013 4 + 198278 TATT s panTro5.chr18 65064891 4 + 78221452 TATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183945 4 + 77229886 TATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403452 4 + 17472758 TATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443936 4 - 152096393 TATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393626 4 + 70235451 TATC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63085037 4 - 75711847 TATC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644245 4 - 18804593 TATC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13256099 4 + 18905526 TATC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084399 4 - 72318688 TATC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421467 4 - 1517660 TATC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517580 4 + 6513552 TATC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287615 4 + 117903854 TATC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19475131 4 - 31320352 TATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670441 4 + 2203405 TATC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622991 4 - 14941987 TATC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1277800 4 - 1406956 TATC i proCoq1.NW_012148742v1 I 20 C 0 e micMur3.chr19 41537673 1 + 83067054 I e mm10.chr1 111857530 0 + 195471971 C e dasNov3.JH575754 502411 217 - 2150887 I e canFam3.chr1 112328020 0 - 122678785 C e otoGar3.GL873546 11249357 0 - 20685099 C a score=181322.000000 s hg38.chr18_GL383571v1_alt 155017 15 + 198278 ATCCAAGTAGCATTT s panTro5.chr18 65064895 15 + 78221452 ATCCAAGTAGCATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183949 15 + 77229886 ATCCAAGTAGCATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403456 15 + 17472758 ATCCAAGTAGCATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443940 15 - 152096393 ATCCAAGTAGCATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393630 15 + 70235451 ATCCAAGTAGCATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63085041 15 - 75711847 ATCCAAGTAGCATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644249 15 - 18804593 ATCCAAGTAGCATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13256103 15 + 18905526 ATCCAAGTAGCATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084403 15 - 72318688 ATCCAAGTAGCATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421471 15 - 1517660 ATCCAAGTAGCATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517584 15 + 6513552 ATCCAAGTAGCATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287619 15 + 117903854 ACCCAAATAGCATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19475135 15 - 31320352 ATCCAAATAGCATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670445 15 + 2203405 ATCAAAATAGCATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3622995 15 - 14941987 ATCCAAATACCACTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537674 15 + 83067054 ATCCATGTAGCATTT i micMur3.chr19 I 1 C 0 s proCoq1.NW_012148742v1 1277804 15 - 1406956 ATCCATGTAGCATTT i proCoq1.NW_012148742v1 C 0 C 0 s mm10.chr1 111857530 4 + 195471971 -----------ATTG i mm10.chr1 C 0 C 0 s canFam3.chr1 112328020 5 - 122678785 ----------ATTTT i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 502411 217 - 2150887 I e otoGar3.GL873546 11249357 0 - 20685099 C a score=25636650.000000 s hg38.chr18_GL383571v1_alt 155032 1542 + 198278 TATATGCTTGCCGGTAACTCTGAGATAGAATGAATAATCTTTCTTGAGATTACTAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTTTGAAATTACAGAGGGACAATCATGAGAGATATGGGAAG--GA---AT---ATGTTGGGGAGGGGGGGCAGTCTCCACTCACACTATAATGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATCTAACATATACAGAGCTTTATCACTCTGGAGGCACATTTTGACATAATAAT-AACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTT-CCAAGTGTT-AGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCCACACTGCCTTAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CGTAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACTA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTAACGCAAAATTAATCAACTGGGGGGAAAATGCCCCAC-A---ATATTGAGAGTTCAGCGATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGATGGG-----AGTGATGTGATGGCGAACAGCTGTAGCTCCAGGGAGGATAAAAAGTGAAAGGAGAGTTTTAAACAGACAATCATGTCT---------AAAATAATCTACCAGCCCTTGCCACCCAGATTGTTCAAAGACTTATTCCTTA-TATTTCTAAGTAAAAAACTTCAAGGAGGCTTTTAAAGTCA--GTTTCCGACCTC--AAA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACATTAAACACAGTAAAAGAAA--------------------TT-TTCTTTTT-------------CTTTGTGCAAGATAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGGGA--GTTAGACAAAAACTT---AAAAT-TTTCCCATCTCCCCTGA-CCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGcaaacaaca s panTro5.chr18 65064910 1545 + 78221452 TATATGCTTGCCGGTAACTCTGAGATAGAATGAATAATCTTTCTTGAGATTACTAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTTTGAAATTACAGAGGGACAATCATGAGAGATATGAGAAG--GA---AT---ATGTTGGGGAGTGGGGGCAGTCTCCACTCACACTATAGTGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATCTTGACATAATAAC-AACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCCACACTGCCTTAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACTA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTAATGCAAAATTAATCAACTGGGGGGAAAATGCCCCAC-A---ATATTGAGAGTTCAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGATGGG-----AGTGATGTGATGGCGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGGAGAGTTTTAAACAGACAATCATGTCT---------AAAATAATCTACCAGCCCTTGCCACCCAGATTGTTCAAAGACTTATTCCTTA-TATTTCTAAGTAAAAAACTTCAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AAA----AAAAACATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACATTAAACACAGTAAAAGAAA--------------------TT-TTCTTTTT-------------CTTTGTGCAAGATAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGGGA--GTTAGACAAAAACTTTT-AAAAT-TTTCCCATCTCCCCTGA-CCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64183964 1543 + 77229886 TATATGCTTGCCGGTAACTCTGAGATAGAATGAATAATCTTTCTTGAGATTACTAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTTTGAAATTACAGAGGGAC-ATCATGAGAGATATGAGAAG--GA---AT---ATGTTGGGGAGTGGGGGCAGTCTCCACTCACACTATAGTGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATCTTGACATAATAAC-AACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCCACACTGCCTTAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACTA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTAATGCAAAATTAATCAACTGGGGGGGAAATGCCCCAC-A---ATATTGAGAGTTCAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGATGGG-----AGTGATGTGATGGCGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGGAGAGTTTTAAACAGACAATCATGTCT---------AAAATAATCTACCAGCCCTTGCCACCCAGATTGTTCAAAGACTTATTCCTTA-TATTTCTTAGTAAAAAACTTCAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AAA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACATTAAACACAGTAAAAGAAA--------------------TT-TTCTTTTT-------------CTTTGTGCAAGATAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGGGA--GTTAGACAAAAACTTTT-AAAAT-TTTCCCATCTCCCCTGA-CCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5403471 1529 + 17472758 TATATGCTTGCCAGTAACTCTGAGATAGAATGAATAATCTTTCTTGAGATTACTAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTTTGAAATTACAGAGGGACAATCATGAGAGATATGGGAAG--GA---AT---ATGTTGGGGAGC-GGGGCAGTCTCCACTCACACTATAGTGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGACATAATAAC-AACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGGGGGAACCACAGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCCACACTGCCTTAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGC-AGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACTA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTAATGTAAAATTAATCAACTGGGGGGAAAATGCCCCAC-A---ATATTGAGAGTTCAGCGATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGATGGG-----AGTGATGTGATGGCGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGGAGAGTTTTAAACAGACAATCATGTCT---------AAAATAATCTACCAGCCCTTGCCACCCAGATTGTTCAAAGACTTATTCCTTA-TATTTCTAAGTAAAAAACTTCAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AAA----AAAA-CATATTCAT------------TCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACATTAAACACAGTAAAA-AAA--------------------TT-TTCTTTTT-------------CTTTGTGCAAGATAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGGGA--GTTAGGCAAAAACTTTT-AAAAT-TTTCCCATCTCCCCTGA-CCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139443955 1546 - 152096393 TATATGTTTGCTGGTAACTCTGAGATAGAATGAATAATCTTGCTTGAGAATACTAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTTTGACATTACAGAGGGACGATCATGAGAGATATGGGAAG--GA---AT---ATGTGGGGGAGGGGGAGCAGTCTCCACTCACACTATAATGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACATATTCACAGCTTTATCACTCTGGAGGCACATTTTGACATAATAACAAACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTTAAGAGAGCTTGGGGGAACTACGGTTTGAAACATCAGGAAGAACACTGCAATCTGTACAGAGATTTTCATCAAG-CTCGACACTGCCTTAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGATTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACCA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTAATGCAAAATTAATCATCTGGGGGGAAAATGCCCCAC-A---ATACTGAGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGATGGG-----AGTGATGTGATGGCGAACAGCTGTAGCTTCAGGGAGGATCAAAAGTGAAAGGAGAGTTTTAAACAGACAATCATGTCT---------AAAATAATCTACCAGCCCTTGCCACCCAGATTGTTCAAAGACTTATTCCTTA-TATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AAA----ATAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-GATCACTGAACTTTATACACAGTAAAAAAAA--------------------TTCTTCTTTTC-------------CTTTGTGCAAGATAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGGGA--GTTAGACAAAAACCTTT-AAAAT-TTTCCCATCTCCCTGAC-CCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACGAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57393645 1534 + 70235451 TATATGCTTGCTGGTAACTCTCAGATAGAAAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCGG-TGTCCTCTCAACC------TACAT-----TCACATGA----ATTTCACTCATTTTGACATTACAGAGGGACGATCATGAGAGATATGGGAAG--GA---AG---ATGTGGGGGAGGGGGGGCAGCCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAGCATATCCACAGCTTTATCACTCTGGAGGCACATTTTGCCATAATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACACACTC-CCAAGTGTT-AGAGAGCTTGAGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAC-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTT-TGATTTCAGATCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CGG------------TGGCAACA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGAGGAAAATGCCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGGTAGG-----AGAGATGTGATGGTGAACAGCTGTAGCTTCAGGGAGGACAAAAAGTGAAAGAAGAGTTTTAAACATACAACCATGTCT---------AAAATGATCTACCAGCCCTTGGCACCCAGATTT------------TTCCTTATTATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--CTTCC--CAGAAGAAATCCTACAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGATTATCACTGCACGTTATACACAGTAAAAGAAA--------------------TT-CTTTTCTT--------------TTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTG-TTGAGGTCTCTAGATATATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGGCAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTATTTAAAACAATCTCTCTGTGCAAATAACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63085056 1533 - 75711847 TATATGCTTGCTGGTAACTCTCAGATAGAAAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCGG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCACTCATTTTGACATTACAGAGGGACGATCATGAGAGATATGGGAAG--GA---AG---ATGTGGGGGAGGGGGGGCAGCCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGCCATAATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACACACTC-CCAAGTGTT-AGAGAGCTTGAGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAC-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTT-TGATTTCAGATCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CGG------------TGGCAACA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGAGGAAAATGCCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGGTAGG-----AGAGATGTGATGGTGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGAAGAGTTTTAAACATACAACCATGTCT---------AAAATGATCTACCAGCCCTTGGCACCCAGATTT------------TTCCTTATTATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTACAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGCACATTATACACAGTAAAAGAAA--------------------TT-ATTTTCTT--------------TTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTG-TTGAGGTCTCTAGATATATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGGCAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13644264 1533 - 18804593 TATATGCTTGCTGGTAACTCTCAGATAGAAAGAATAACCTTTCTTGAGAATAATAGTGTAGATTCAGGTCGTCGG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCACTCATTTTGACATTACAGAGGGATGATCATGAGAGATATGGGAAG--GA---AG---ATGTGGGGGAGGGGGGGCAGCCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGCCATAATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACACACTC-CCAAGTGTT-AGAGAGCTTGAGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAC-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTT-TGATTTCAGATCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CGG------------TGGCAACA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGAGGAAAATGCCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTCCT----TGACAGTGACAGAAAGGAT----AGGGTAGG-----AGAGATGTGATGGTGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGAAGAGTTTTAAACATACAACCATGTCT---------AAAATGATCTACCAGCCCTTGGCACCCAGATTT------------TTCCTTATTATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTACAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGCACATTATACACAGTAAAAGAAA--------------------TT-CTTTTCTT--------------TTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTG-TTGAGGTCTCTAGATATATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCGAGGGAGGTGATGGCAT-AAAAATAAATCCTGCCAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13256118 1545 + 18905526 TATATGCTTGCTGGTAACTCTGAGATAGAAAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCGG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCACTCATTTTGACATTACAGAGGGACGATCATGAGAGATATGGGAAG--GA---AG---ATGTGGGGGA-CGGGGGCAGCCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGCCATAATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGAGGGAACTACGGTTTGAAATATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAC-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTT-TGATTTCAGATCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CGG------------TGGCAACA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGAGGAAAATGCCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGGTAGG-----AGAGATGTGATGGTGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGAAGAGTTTTAAACATACAACCATGTCT---------AAAATGATCTACCAGCCCTTGGCACCCAGATTTTTCAAAGACTTATTCCTTATTATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTACAGTTCTGATAGGAGCTT--TCACCATTTCTTC---------------AGTGA-TATCACTGCACATTATACACAGTAAAAGAAA--------------------TT-ATTTTCTT--------------TTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGGCAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60084418 1541 - 72318688 TATATGCTTGCTGGTAACTCTGAGATAGAAAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCGG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTTTGACATTAT-GAGGGACGATCATGAGAGATACGGGAAG--GA---AG---ATGTGGGGGA-GGGGGGCAGCCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGCC---ATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGAGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAC-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTC-TGATTTCAGATCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCAGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACCA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATGAATTTGATTCTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGAGGAAAATGCCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGATAGTGACAGAAAGGAC----AGGGTAGG-----AGAGATGTGATGGTGAACAGCTATAGCTTCAGGGAGGATAAAAAGTGAAAGAAGAGTTTTAAACATACAACCATGTCT---------AAAATGATCTACCAGCCCTTGGCACCCAGATTTTTCAAAGACTTGTTCCTTATTATTTCTAAGTAAAATACTTTAAAGAGGCTTTTAAAGTTA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTACAGTTTTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGCACATTATACACAGTAAAAGAAA--------------------TT-CTTTTCTT--------------TTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGTGT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTAATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 421486 1543 - 1517660 TATATGCTTGCTGGTAACTCTGAGATAGAAAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCGG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCACTCATTTTGACATTACAGAGGGACGATCATGAGAGATATGGGAAG--GA---AG---ATGTGGGGGA-GGGGGGCAGCCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGCCATAATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAA--GTT-AGAGAGCTTGAGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAC-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTT-TGATTTCAGATCCTACCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------TTAA--------------------------------AAAGACACTG----CGG------------TGGCAACA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTTTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGAGGAAAATGCCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGGTAGG-----AGAGATGTGATGGTGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGAAGAGTTTTAAACATACAACCATGTCT---------AAAATGATCTACCAGCCCTTGGCACCCAGATTTTTCAAAGACTTATTCCTTATTATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTACAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGCACATTATATACAGTAAAAGAAA--------------------TT-CTTTTCTT--------------TTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGACA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGGCAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3517599 1549 + 6513552 TATATGCTGGCTGGTAACTCTGAGATAGAAAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----ATTTCATTCATTATGACATTACAGAGGGACGATCATGAGAGATATGGGAAG--GA---AG---ATGCGGGAGA-GGGGGGCAGCCTCCATTCACTCTATAATGGAAGAA---AAA-TGACAGCCCAGTT-AGGTTTAGCTGG-AATGTAACATACCCACAGCTTTATCACTCTGGAGGCACCTTTTGCCATAATAACAAACTACTGAGGAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGGGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTTAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CAAAGCATTT-TGATTTCAGATCCTAGCAAAATAAAATAAACCACACTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGAAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCTAGT-----------------TTAA--------------------------------AAAGACACTG----CAG------------TGGCACCA----CTTTGAGTCACAGAGTGTTAATTCCAGAAAAATAAATTTGATTCTAAGTCTGTGTCAGTCTTTACTGCAAAATTAATCATCTGGGGGGAAAATATCCCAC-A---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGGGTGGG-----AGAGATGTGATGGTGAACAGCTGTAGCTTCAGGGAGGATAAAAAGTGAAAGAAGAGTTTTAAACAGACAACCATGTCT---------AAAATAATCTACCAGCCCTTGGCACCCAGATTTTTCAAAGACTTATTCCTTATTATTTCCAAGTAAAAAACCTTAAGGAGGCTTTTAAAGTCA--GTTTCTGACCTC--AGA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTACAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGCACATTATACACAGTAAAAGAAA--------------------TT-CTTTTCTT----------TTTCTTTGTGCAAGGTAAGTGTGTCAGAAGACCTTTTCAAAAG-GGTAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCAT-GGTAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCTCTAGATAGATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAATGTTCCCCATCTCCCCTGATCCCCACGATGTAACTTCATCTACCACTCTGTAGCAGAAACTTTTTAGCAG--------ACAAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATGACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-ATTTTTTAAAACAATCTCTCTGTGCAAATAACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105287634 1552 + 117903854 TATATGCTTGCCAGTAACTTTGAGATAGATAGAATAATCGTTCTTGCGAATAATAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----TTTTCATTCATTTTGACATTATAGAAAGAAGATCATGAGAGATATGGGAAG--AA---AG---ATGTGGGGGAGGGAGAGCAGTCTCCATTCACACTATAATGGAAGAA---AAA-AGACAGCCAAGTT-AGGTTTAGCTGGAAATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGACATGATAACAAACCGCTGA-AAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-TCAAGTGTT-AGAGAGCTTGGGGGAACTACGGTTTGAAACATCAGGAAGAAGACTGAAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTAAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CATAGCGTTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACATTTTGTGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGCTTTCCAATTCTGTTTCCAGT-----------------CTAA--------------------------------AAAGACACTG----CAG------------TGGCATTA----CTTTGAGTCACAGAGTGTTAATTCCACCAAAACAAGTTTGATTCTAAGTCTGTGTCAGTCTTTAATGCAAAACTAATTATCTGGG-GGAAAATGCCCCACAA---ATATTGGGAGTTTAGGAATTAGTAACTACTGATTGTTTTTCT----TGACAATGACAGAAAGGAT----AGGGTGGG-----AGTGATGTGATGGCGAAAAGCTATAGCTTCAGGGAGGAAAAAAAGTGAAAGGACAGTTTC--ACAGGCAACCACTTGT---------AAAATAATCTACCAGCCCTTGGCACCCAGATTGTTCAAAGACTTATTCCTTATTATTTTTAAGTAAAAAACTTTAAGGAGGCTTTTCAAGTCA--GTTTCTGATCTC-AAAA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACCTTATACACAGTAAAAGAAA--------------------TT-CTTCTTTTCT-------TTTTCTTTGTGCAAGATAAGTGTGTCAGATGATCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAAATGCGTGGGGAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCCCTAGATAGATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAAT-TTTCCCATCTCCCCTGACCTCCATGATATAACTTCATCTACCACTCTATCGCAGAAACATTTTAGTAG--------ATGAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATAACAT-AAAAATAAATTCTGCTAGGCCAAATATGGTGCC-AATTTTTAAAAGAATCTCTCTGTGCAAATAACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19475150 1542 - 31320352 TATATGCTTGCCAGTAATTCT--GATAGACAGATAACTTG--CTTGTGAATAATAGTGTAGATTCAGGCCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----TTTTCATTCACTTTGACATTATAGAAGGAAGATCATGAGAGATATGGGAAG--AA---AG---ATGTGGGGGAGGGGGAGCAGTCTCCATTCACACTGTAATGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGACATGATAACAAACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-TCAAGTGTT-AGAGAGCTTGGGGGAACTATGGTTTGAAACATCAGGAAGAAGACTGAAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTAAT-GTTTTCAT-CCAATACACTGTAATCACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACATTTTGTGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTCGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------CT-A--------------------------------AAAGACACTG----CAG------------TGGCATTA----CTTTGAGT--CAGAGTGTTAATTCCATCAAAATAAGTTTGATTCTAAGTCTGTGTCAGTCTTTAATGCAAAACTAATCATCTGAG-GGAAAATGCCACACAA---ATATTGGGAGTTTAGCAATTAGTAACTTCTGATTGTTTTTCT----TGACAGTGACAGAAAGGAT----AGGGTGGG-----AGTAAC-TGACGGCGAACAGCTGTAGCTTCAGGGAGGAAAAAAAGTGAAAGGACAGTTTC--ACAGAAAATCACATGT---------AAAATAATCTACCAGCCCTTGGCACCCAGATTGTTCAAAGACTTATTCCTTATTATTTTTAAGTAAAAAACTTAAAGGAGGCTTTTCAAGTCA--GTTTCTGATCTC--AAA----AAAA-CATACTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTCATAGGAGCTT--GCACCATTTCCTC---------------AGTGA-TATCACTGAACCTTATACACAGT-AAAGAAA--------------------TT-CTTCTTTTCT-------TTTTCTTTGTGCAAGATAAGTGTGTCAGAAGATCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCATGGGGAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCCCTAGATAGATTAGCACAGTTACTGATGAAGGAGA--GTTAGACAAAAACCTTTAAAAAT-TTTCCCATCTCCCC-GACCTCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACATTTTAGTAG--------ACGAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATAACAT-AAAAATAAATTCTGCTAGTCCAAATATGGTGCC-AATTTTTAAAACAATCTCTCTGTGCAAATAACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1670460 1540 + 2203405 TATATACTTGCCAGTAATTTTGAGATAGACAGAATAATCTTTCTTGCGAATAATAGTGTAGATTCAGGTCTTCAG-TTCCCTCTCAACC------TACAT-----TCACATGA----TTTTCATTCATTTTGACATTATAGAAGGAAGATCATGAGAGATATGGGAAG--AA---AG---ATGTGGGAGAGGTGGAGCAGTCTCCATTCACATTATAATGGAAGAA---AAA-TGACAGTCAAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGACATAATAACAAACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-TCAAGTGTT-AGAGAGCTTGGGGGAACTACGGTTTGAAACACCAG---GAAGACTGAAATCTGTACAGAGATTTTCATCAAGTCTCGACACTGCCTAAT-GTTTTCAT-CCAATACATAGTAATTACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACATTTTGTGATGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGAGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------CTAA--------------------------------AAAGACACTG----CAG------------TGGCATTA----CTTTGAGTCACAGAGTGTTAATTCCACCAAAATAAGTTTGATTTTAAGTCTGTGTCAGTATTTAACGCAAAACTAATTATCTGGG-GGAAAATGCCCCACAA---ATATTGGGAGTTTAGCAATTAGTAACCACTGATTGTTTTTCT----TGACAGCGACAGAAAGGAT----AGGGTGGG-----AGTGATGTGACGGCGAACAGCTGTAGCTTCAGGGAGGAAAAAAAGTGAAAGGACAGTTTC--ACAGAAAACCACGTGT---------AAAATAATCTACCAGCCCTTGGCACCCAGATTGTTCAAAGACTTATTCCTTATTATTTTTAAGTAAAAAACTTTAAGGAGGCTTTTCAAGTCA--GTTTCTGATCTC--AAA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGACAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACCTTATACACAGT-AAAGAAA--------------------TT-CTTCTTTTCT-------TTTTCTTTGTGCAAGATAAGTGTGTCAGAAGATCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGGAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCCCTAGATAGATTAGCACAGTTACAGATGAAGGAGA--GTTAGACAAAAACCTTT-AAAAT-TTTCCCATCTCCCCTGACCTCCATGATATAACTTCATCTACCACTCTGTAGCAGAA--ATTTTAGTAG--------ATGAAATATTCAGAA-ACA-----AAGGGAGGTGATAACAT-AAAAATAAATTCTGCTAGTCCAAATATGGTGCC-AATTTTTAAAACAATCTCTCTGTGCAAATAACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3623010 1549 - 14941987 TATATGCTTGTCGGTAACTTTGAGATAGACAGAATAATCTTTCTTGAGAATAATAGTGTAGATTCAGGTCTTCAG-TGCCCTCTCAACC------TACAT-----TCACATGA----TTTTCATTCATTTTGACATTATAAAAGGAAGATCATGAGAGATATGGGAAG--AA---AG---ATGTGGGGGAGGGGGAGCAGTCTCCATTCACACTATAATGGAAGAA---AAA-TGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCAGATTTTGACATGATAACAAACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-TCAAGTGTTAAGAGAGCTTGGGGGAACTACGGTTTGAAACATCAG---GAAGACTGAAATCTGTACAGAGATTTTCATCAAGCCTCGCCGCTGCCTAAT-GTTTTCAT-CCAATACATTGTAATTACTCCACTGGCTTATAATGG----CATAGCATTT-TGATTTCAGAGCCTACCAAAATAAAATAAACCACATTTTGTGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCCAGT-----------------CTAA--------------------------------AAAGACACTG----CAG------------TGGCATTA----CTTTGAGTCACAGAGTGTTAATTCCACCAAAATAAGTTTGATTCTAAGTCTGTGTCAGTCTTTAATGCAAAACTAATCATCAGGG-GGAAAATTCCCCACAA---ATATTGGGAGTTTAGCAATTAGTAACTACTGATTGTTTTTCT----TGACAGTGACAGGAAGGAT----AGGGTAGG-----AGTGATGTGATGGCGAAGAGCTGTAGC-CCAGGGAGGAAAAAATGTGAAAGGACAGTTTC--ACAGACAATCACGTGT---------AAAATAATCTACCAGCCCTTGGCACCCAGATTGTTCAAAGACTTATTCCTTATTATTTTTAAGTAAAAAACTTTGAGGAGGCTTTTCAAGTCA--GTTTCTGATTTC-AAAA----AAAA-CATATTCATTCTGTATTTCCATCTGTA--TTTCC--CAGAAGAAATCCTATAGTTCTGACAGGAGCTT--TCACCATTTCCTC---------------AGTGA-TATCACTGAACCTTATATATAGTAAAAGAAA--------------------TT-CTTCTTTTCT-------TTTTCTTTGTGCAAGATAAGTGTGTCAGAAGATCTTTTCAAAAG-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCGTGGGGAAAGCAGCAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCCCTAGATAGATTAGCACAGTTACAAATGAAGGAGA--GTTAGACAAAAACCTTT-AAAAT-TTTCCCATCTCCCCTGACCTCCATGATATAACTTCATCTACCACTCTGTAGCAGAAACATTTTAGTAG--------ACGAAATTTTCAGAA-ACAAAGGCAAGGGAGGTGATAACAT-AAAAATAAATTCTGCTAGGCCAAATATGGTGCC-AATTTTTAAAACAATCTCTCTGTGCAAATAACA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41537689 1551 + 83067054 TACATGCTCACTGATAACCCCGAGATAGAAAGAATGATCTCCCTTGAGAAAAACAGTAAAGATTTAGGTCTTCAG-TGACCTATCAACCTATTAACATAT-----TCATATGA----TTTTCATTCATTTTGACATTATAGAGAAAAGATCACCAGAGCTATGGGAAG--GA---AGTACATGTGGGGGAGGGACAGCAGTCTCCACTCTCACT---ATGGAAGAA---AAACTGACAGTCGAGTT-AGGTTTAGCTGG-AATGTAACAAATCCACAGCTTTATCACTCTGGAAGCACATTTTGACATAATAACAAACCACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGGGGGAACTACAGTTTGGAACATCA---AGAAGACTGCAATCGGTACAGATATTTTCATCAAGTCTTGACACTGTCTAATAGTTTTCAT-CCAATACACTGTAATTATTTCACTGGCTTACAATGG----CATAGCATTT-TTATTTCAGAGCCTACCAAAATAAAATGAACCACATTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTCGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAGTTCTGTTTCTTGT-----------------CTAA--------------------------------AAAAACACTGGCAGCAG------------TGACACTGCTATCTTTGAGTCATACAGTGTTAATTCCACAAAAATAAATTTGATTTTAAGTCTGTTTCAGTCTTTAGTGAAAAACTAATCATCTGGG-GGAAAAATACCCACAA---ATATTGGGAGTTTAGCAATTAGTAACTGCTGATTGTTTTGCT----TGACAGTGACAGAAAGGAT----AGTGTGGG-----AGTGGTATGATGGTGAACAGCTGTAGTTTCAGGGAGGCAAAA----------AGAGTTTAAAACAGACAAGCATGTCT---------AAAATAACCTACCAGCCCTTGGTACTCAGATTGTTCAAAGACTTATTCCTTATTATTTCTAAGTAAAAAACTTTAAGTAGGCTTTCCAGGTCACTGTTTCTGACCTC--AAA----AAAG-CATATTCATTCTGTTCTTCCATCTGTA--TTGTCCACAGAAGGAATCCTATAGTTCTGATAGGAGCTT--TCACCGTTTCCCC---------------AGTGA-TATCATTGAACATTATACACAGTAAAAGAAA--------------------TT-CTTTTTCT---------------TTGTGCAAGATAAGTGTGTTAGAAGACCTTTTCAAAAA-GATAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCATGGGTAAAGCAGGAATTACAAGGCCTTTAGCAGTGTTTGAGGTCCCAAGATAGATTAACACAGTTATAGATGAAGGAGA--GTTAAACAAAAACCTTT-AAAAT-CTTCCCATCTCCCCTGGCACCCATGATATAACTTCATCTACACCTATATGGCAGCAACATTTTAGCAG--------AAAAAAT-TTCAGAA-ACAAAGGCAAACAAAGTAATGCCAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCT-GATTTTTAAAATAATCTCTCTGTGCAAATAACA i micMur3.chr19 C 0 I 18 s proCoq1.NW_012148742v1 1277819 1548 - 1406956 TACATGCTTCCTGATAACCCTGAGATAGAAAGAATGATCTCCCTTGAGAAAAATAGTGTAGATTCGGGTCTTCAG-TGACCTATCAACCTATTAATATAT-----TCATATGA----TTTTCATTGGTTTTGACATTATACAGAAAAGATCATGAGAGCTATGGGAAG--GA---AGTATATGTGGGGGAGGGACAGCAGTCTCCACTCACACTATAATGGAAGAA---AAACTGACAGCCAAGTT-AGGTTTAGCTGG-AATGTAACAAATCCACAGCTTTATCACTCTGGAAGCACATTTTGACATAATAACAAACCACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-AGAGAGCTTGGGGGAACTACAGTTTGGAACATCA---AGAAGACTGCAATCTGTACAGAGATTTTCATCAAGTCTTGACACTGCCTAATAGTTTTCAT-CCAATACATTGTAATTATTCCACTGGCTTACAATGG----CATAGCATTT-TTATTTCAGAGCCTACCAAAATAAAATGAACCACATTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAAC-TTCGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAGTCAGG-CAGTTTTCCAATTCTGTTTCTTGT-----------------CTAA--------------------------------AAAAACACTGGCAGCAG------------TGACACTGCTGTCTTTGAGTCATACAGTGTTAATTCCACAAAAATAAATTTGATTCTAAGTCTGTTTCAGTCTTTAGTGAAAAATTAATCATCTGGG-GGAAAAATCTCCACAA---ATATTGGGAGTTTAGCAATTAGTAACTGCTGATTG-TTTGCT----TGACAGTGACAGAAAGGAT----GGGGTGGG-----AGTGGTGTGATGGTGAACAGCTGTAGTTTCAGGGAGGCAAAAAAG-------AGAGTTTAAAACAGACAAGCATGTCT---------AAAATAACCTATCAGCCCTTGGTACTCACATTATTCAAAGACTTATTCCTTATTATTTCTAAGTAAAAAACTTTAAGTAGGCTTTCCAGGTCACTGTTTCTGACCTC--AAA----AAAG-CATATTCATTCTGTACTTCCATCTGTA--TTGTCCACAGAAGGAATCCTATAGTTCTGATAGGAGCTT--TCACCGTTTCCCC---------------TGTGA-TATCATTGAACATTATATACAGTAAAAGAAA--------------------TT-CTTTTTCT---------------TTGTGCAAGATAAGTGTGTTAGAAGACCTTTTCAAAAA-GACAAGGAACTTTTGTAGTCCATCTTGAAAGCAAGAGATGCTTGGGTAAAGCAGAAATTGCAAGGCCTTTAGCAGTGTTTGAGGTCCCAAGATAGATTAACATAGTTACAGATGAAGGAGA--ATTAAACAAAAACCTTT-AAAAT-CTTCCCATCTCTCCTGACCCTCATGATATAACTTCATCTACACCTGTATAGCAGAAACATTTTAGCAG--------AAACAAT-TTCAGAA-ACAAAG------AAAATGATGCCATAAAAAATAAATCCTGCTAGGCCAAATATAGTGCC-AATTTTTAAAATAA--TCTCTGTGCAAATAaca i proCoq1.NW_012148742v1 C 0 I 2 s otoGar3.GL873546 11249357 1536 - 20685099 TGCACGCTCACTGACAACCCTGAGACAGGGAGAGTGCTCTCCCTGGAGAAACGTCCTGCGGATTCAGGTCTTCGG-C--CCTTTCAACC------CATAT-----TCACATGA----TTTTCATTCGTTCTGACATTATAGAGAAAAGCTCG-AAGAGCCATGAGAAG--TA---A----ATGTGGGGGAGGGGTAGCCATCTCCACTCACACCATAATGGAAGAA---AAA-TGACAGCCGAGTT-CGGTTTAGCTGG-AATGTAACAAATCCACAGCTTTATCACCCTGGAAGCACATTTTGACATAATAACAAACCACTGAGAAAGAACCACTTTTATCTAGGTTGGAATGACAGATTC-CCGAGTGTT-AGGGAGCTTAGGGGAACTACAGTCTGAAACATCA---AGAAGGCTGCGATCTCTACAGAGATTTTCATCAAGTCTCCATACTGCCTAATAGTTTTCAT-CCCGTACATTGTAATTACTCCACTGGCTTACAATGG----CACAGCATTT-TCATTTCAGAGCCTACCAAAATAAAATAAGCTACATTTTCTGATGGCTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCTTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAAGATAAATCAGG-CAGTTTTCCAATTCTGTTTCTAGT-----------------CTAA--------------------------------AAAAACACTGGCAACAG------------TCACACTGCTTTCTTTGAGTCATACAGTGTTAATCCCACAAAAAAAAATTTGATTCTAAGTCTGTTTTAGTCTTTAATGAAAAATTAATCATGTAGG-GGAAAAATCCCCACAA---ATATTGGGGGGTTAGCAATTAGTAACTACTGATTGTTTTGCG----TGACAGTGATAGGAAGGAC----AGGATGGC-----AGTGGTAAGATGGGGAAGAGCTGTAACTTCAGGGACGCAAAAA---------AGAGTTTAAA----ACAAACATGTCT---------AAAATAACCTATCAGCCCTCAGTACTCAGATTGTTCAGAGACTTATTCCTTATTATTTTTAAATAAGGAACTTTAAATAGGCTTTTCAGGTCAGTGTTTCTGACCTC--AAAAAAGAAAG-AATATTTAGTCTGTACTTCAATCTGGA--TTGTC--CAGAAGAAATCCTATAATTCTGATAGGAGCTT--TCACCATTTCCCC---------------AGTGA-TAGCACTGAATGTTACACACAGTAAAAGAAA--------------------TT-CTTCTTCT---------------TTGTGCAAGGTGAGTGTGTCAGAAGACCTTTTGAAAAA-GATAAGGAACTTTTGTATTCCATCTTGAAAGCAAAAGATGCTTGGGTAAAGCAGGAATTCCAAGGTCTTTCGCAGTGTCTGAGGTCCCAAGATAGATCAGCACAGCTACGGATGAAGAAGA--GTCAGACAAAAACCTTT-ACAAT-TGTCCCATCTCCCCTGACCCCCAAGACGTGACTTCATCTACACCTGTGTAGCAGAAACATTTTAGCAG--------AAAACAA-CTTAGAA-ACAAGG-CAAAGAAAATGATGACAC-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-AATTTTAAAAATAA--TCTCTGTGCAAATAACA i otoGar3.GL873546 C 0 I 2 s mm10.chr1 111857534 1522 + 195471971 TAAATGTTTGTTTCCAAACCTTTTATAGAGTAA--------TCTTGAAACTAAAAATGTAGATTTGTGTTTTCAC-T-----------C------TATAT----------TAA----TTTCTATTTATTTTAACATGA---AGGCAAATTTCTGAATCCTGTGTGATA--AGCACAA---ATATAGGGGACATGGAGTGGTCTTTATTTATGCCATTATAGAAGAAAAGAAA-TGACAGCTAAGTTAAGATTCTGCTGG-AATGTAACA-ATCCTCAGCTTTATCACTCTGGAGGCATATTTAGACAAAATAACAAACTACAGAGACAAAACCTCTTTTATCCAGGTCAGTGTGACAGACTC--CAAATGTT-AGAGA--TTGAGGAAACTATAGTTCGAAGCATCAGGAAGAAGACTGCAATCTG--CATAGATTACCATGAAATCTTGATGCTGCCTGAT-AATATTACACAAACACATTGTAATTACTACATTGGCTCATAATAG----CAGAGCATTTCTGATTTCAGAAACTACC-AAGTAAAATGAACCACATTTTATGTTGACTA-ATTTATAATGAGATGCAGATGTTAAAGAGAACAGATGCTTCTGACATCATCTCTCAATTGCCTTTAACTTTTGCAGACACTAGCAGCCTGTAAATTCACTCACTGGGCTACAGGATAAAGCAGGAAAGCTTTTTAATTCTGTTTCCAGTCACTACCACCACCCACCTTAACTCAACCCTCCCCCACCCCACAACACACACTTAAAAACACTA----CAACAGACAGAAGTCTGCTTTTG----CTTTGAGTCATATTGTGGTAATGCCACACAACTAAATGTGATTATAAATCTGTGTAAGTCTTTAACACAAAGTAAATCATCC----AGAGAAGGGCTTGT--------TGGATAGTTTTGTAGCTAGTAATTACTGACTTTTTTTTTTTGGTGACAATGACAGAATGGATAGACAGGGTAAG-----GGTAGTGTGATGATGAACAGCTGTAGCTTCAG---------AAAGACAAATGAGAG------------AATCACTTCC---------AAAATAATTCACCAAATTTCAGTATCC--ACTGTTCAA--TCTTATTTCTTAGTA--Caaaaaaaaaaaaaaaaaaggaag-----aaagaaa-------------c--aaa----aaaa-CCT--TAATTCTATGTTTTCATCTTTA--TTTTC--TAG-------------TTTCTTAAGGGAACTTTATCATAAGCTCCTCCCCCCAGCCTCACCAAGTGA-TTTCAATAAACACTATACAACGTAAAATAAT--------------------TT-TTGTTTTTTTATTTCTCGTTTTTGTGTGCAAGGTAAATGTT-----AGACGTTTTCAAAAC--ATAAAG---TTTTGTAGTCCATATTAAGAGCGAGAGATGACTAGATACAGCAGCAATTGCAAGGCCGTTTGTAGTGTTTGAGGTCCTAAGATAGATAA--ATAGTTTCCAAAGAAGTTGA--GTT----AAAGTCCATT-AAAAC----CCCATATTTCAGAA-CCCCAGAATATA--------TAC--CTCTGTAGCAGAAACATTTTAGCAG--------AAAAAAA-TTCAGAA-ACAAAGGCAAGAAAAGTGGTAACAT-AAAAATAAATCCTGCTAGGCCAAATATGGTGCC-TATTTTGAAAATA---TCTCTGTGCAAATAACA i mm10.chr1 C 0 I 2 s canFam3.chr1 112328025 1590 - 122678785 TACATGGTTGTTGATAACCCTGAGATAGGTAGAATAACCTTCCTTGAGAATAAC--TGTAGATTCGGGTCTTCAGCTGCCCTCTCAACC------TATAT-----TAATACAATACGATTGCATTAATTTTGACATTGTGAAGAGAAAGG---GAGAGCAGTGGGAAG--GA---AGGAGATGTAGGGGAACATGAGCGATCTGCATTCATGCTATAGTGGAAGAG---AAA-TGACAGCCACGTT-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACATTTTGAC---ATAACAAACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTC-CCAAGTGTT-CGAGAGCTTGAGGAAACTA--GTCTGAAACGTCAG---GAAGACTGCAATCTGTACAGAGATTTTCATCAGGTCTCGACACTGCGTAATGGTATTTAT-CCAATGCATTGTAATTACTGCACTGGCTTATAATGG----CACAGCATTT-TGATTTCAGAGCTTACCAAAATAAAATGAACCACATTTTATGACGACTACATTTATAATAAGATGCAGATGGTAAAGGAAACAGATGCCTCTGACATCATCTCCCATTTGCCTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAGGGATGCAGGATAAGTCAGG-CAGTTTTCCAACTCTGTTTCCAGT-----------------CTAA--------------------------------AAAAACACTGGCAGCAG------------TGGCATTGCTTTCTCTGAGTCATGCAGTGATAATTCCACAAAAAGAAATTTGATTCTAA----GTGTCAGGCTTTAATGCAAAATTAATCATCAGGGAAAAAAAATCCCCACCA---ATGTCGGGACTTCAACAATTAGTAACAACGGACTGTTCTGCA----TGACAGTGACAGAAAGGAC----ATGGTGCGGTGCAAGTGGTGTGATGG-GAACAGCTGTAGCTTCAAGGAGGCAAGAAAGAGAAAAGAGAGTTTTAAACAGACAGGCAAGTCT---------AAAATACTCTACCAGCCCTTGGCACCCAGATTGTTCAAAGACTGACTCTTTATTACTTCTAAGTAAAAAACTTTAAGGAGGCTTTTGAGATCACTACTGCTGACCTCAAAAA----AAAA-AATGTTCATTCTGTGTTTCCATCTGTATTTTTTC--CAGAAGGAATCCTATAGTTCTGATAGGAGCTT--TCACCATTTCCCC---------------AGTGA-TAACACTGAACATTATATACAGTTAAAAAAAAAAAAAAATACAAttttttttt-tttttttt---------tttttttGGTGCAAGATAAATGTGTTAGAAGATCCTTTAAAAAA-GATAAGGAACTTTTGTAGTCCATCTTGAAAGGAAGAGATGCTTGGGCAAAGCAGCAATTGAAAGGCCTTTAGCAGTGTTTGAGGTTCCAAGATAGATCAGCACAGTTACAGACGAGGCAGACGGCTAGACGAAAACCTGT-AAAAT-CTTCCTACCTCCCCCGACCACCATCACGTAACTTCATCTATGCCTCTGTAGTAGGAACATTTCGGCAGGAAAAAAAAAAAAAAATTCAGAA-ACAAAGGCAGGGATAGCGGTGATGT-AAAAATAAATCCTGCTAGACCGAATATGGTGCC-TATTTTTAAAATAA--TCTCTGTGCAAGTAACA i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 502628 1532 - 2150887 TATATGCTTGTTGATAACCTTGAGATAGAACAAAG------TCTTAAGAATAATAGCATAGATTCAGGTCTTCAG-TGCCTTCTCAACC------TATATAATTAAAATATGA----TTTTCATTCATTTTGACATTACAGACTGAAAGTGGTGAGAGCTAAAGGGAGTAGA---TG---GTGTGAGGGGAG---------TTTCAGGCATATTATAAGGGAAGAA---AAA-TGACAGCATAGTC-AGGTTTAGCTGG-AATGTAACATATCCACAGCTTTATCACTCTGGAGGCACAGTTTGACATAATAACAAACTACTGAGAAAGAACCACTTTTATCTAGGTCAGAATGACAGACTCCCCAAGTGTT-AGAG---CTTGGGGAACTACAGTATGAAACATCAGGAAGGAGACTGCAATCTGTACAGCAATTTTCATCAAGTCTTGACACTACCTAATAGTTTTCAA-CTAATACATTGGAATTAGTCCACTGGCTCATAATGGCATACATAGCATTC-TGATTTCAGAGCCTACCCAAATAAAATGAACCACACTTTATGACAACTACATTTATAATAAGATGCAGATGGTAAAAGAAACAGATGCCTCTGACATCATCTCCCTTTTGCCTTCAACTTTTGCAGACACTGGCAGTCTGTAAACTCATTCAAAAGGATGTAAGATAAGTCAGG-CAGTTTTCCAACTCTGTTTTCAGT-----------------CTAA--------------------------------AAAAATACTGCCAGCAG------------TGGC-CTGCTTTCTTTGAGCCATACAGTGATGAGTCCACAAAAAGAAATTTAAATCTAAATCTATGACAGGTCTTAATGGAAAATTAGTAATCAGGA-AGAAAAATCCCCAC-AAATATATTGGGAGTTTAGCAATTAGTAACTGCTGATTGTTTTGCT----TGACAGTGACAG---------------TGGG-----AGTGTTGTGATGACAAACATCTGTGGCTCCAGGGAAGCAAA-----GCAAGTAGACTTTTAAACAGACAAGTACAATTCTAAAAGAAAAAAAAAACTACCAGCCCTTGATACCCAAACTGTTCAAAGCCTTA---CTTATTATTTCTAAGTAAAAAACTTTAAGGAGGCTTTTCAGGTCAATTTTTCTGATTTC---AA----AAAA-CACAATCTTTCTGTATTTCCAACTGTA--TTTCC--CAAAAGAA--TCTGTAACTTTGACAGAAGCTT--TCACCATTTCCCC---------------AGTGA-TATCACCACACATTATACACAGTAAAAGGAT--------------------TT-TTG-------------------TGAGTGCAAGATAAATGTGTTACAAGACCTTGAAAAAAAAGTTAAGACTCTTTTGTAGTTCATCCTGAAAGCAAGAGATACTTGGGTAAAGCAACAATTGCATGGCCTTTAGCAGTATGTGAGATCCCAAGATAGATTAGCACAGTTACAGATGACGGAGA--G--ACACACAAGCCTTT-AAAAT-CTTCCCAACTCCCCTGA-CCCCATGATATAACTTCATCTACACCTTTGTAGCAGAAACATTT-AGCAG--------AAAAAGT-TTCAGAACAAAAAGGTAAGGAAAGTGTTGATGC-AAAAATGAATCCTGCTAAGCCAAACAGGGAGCCTATTTTTTAAAACAATCTCTTTGTGCAAGTAACA i dasNov3.JH575754 I 217 C 0 a score=51695.000000 s hg38.chr18_GL383571v1_alt 156574 4 + 198278 ctga s panTro5.chr18 65066455 4 + 78221452 CTGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64185507 4 + 77229886 CTGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5405000 4 + 17472758 CTGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139445501 4 - 152096393 CTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57395179 4 + 70235451 CTGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63086589 4 - 75711847 CTGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13645797 4 - 18804593 CTGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13257663 4 + 18905526 CTGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60085959 4 - 72318688 CTGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 423029 4 - 1517660 CTGA i manLeu1.NW_012106698v1 C 0 I 2 s colAng1.NW_012115433v1 3519148 4 + 6513552 CTGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105289186 4 + 117903854 CTGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19476692 4 - 31320352 CTGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1672000 4 + 2203405 CTGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3624559 4 - 14941987 CTGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1279369 3 - 1406956 -cga i proCoq1.NW_012148742v1 I 2 I 17 s otoGar3.GL873546 11250895 4 - 20685099 CCGc i otoGar3.GL873546 I 2 I 4 s mm10.chr1 111859058 4 + 195471971 CTGG i mm10.chr1 I 2 C 0 s canFam3.chr1 112329617 4 - 122678785 CTGA i canFam3.chr1 I 2 I 2 s dasNov3.JH575754 504160 1 - 2150887 C--- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41539240 18 + 83067054 I a score=79692696.000000 s hg38.chr18_GL383571v1_alt 156578 4029 + 198278 ---acacat----acacgcgt---gcacacacacac--aca------------ca---------------cTAAAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGTAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGAGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAAGAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGATAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAAAATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCCAACTCAGTTTCAGGAATATCAATGTAGGCTGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCAGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAAAAGCTCAATAAACCACAAGGCAATAACAAGTATTAATATCCATCGCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGGATTGGAACTATCAATAAATCTGCAGCTGGAGACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGGTTCCATCTGAAAAGTAACATTAACAAATTGAGTCCATCGTTTTTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAATGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATACCATTTCCCCATGTTGAGAGGCAGTGATTATTTCCCCAGCTGCATCACCAACCTCCTCGCCAGTCCACTTAAGCCACTGCGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAACTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTGTTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGACGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATGACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCGTACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGCACGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCGGAATAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAATGCTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAGACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTTTAAGCAAGTGCAGTTGCCAAAAAGAGAAAACTTAAATTGTATATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTTGAATAACGTTAAAATCTCTAATTTTTCCATAATA s panTro5.chr18 65066459 4029 + 78221452 ---acacac----atacacgc---gtgcacgcacac--aca------------ca---------------cTAAAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGTAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGAGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAAGAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAAAATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCCAACTCAGTTTCAGGAATATCAATGTAGGCTGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCAGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAAAAGCTCAATAAACCACAAGGCAATAACAAGTATTAATATCCATCGCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGGATTGGAACTATCAATAAATCTGCAGCTGGAGACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCATCGTTTTTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAATGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATACCATTTCCCCATGTTGAGAGGCAGTGATTATTTCCCCAGCTGCATCACCAACCTCCTCGCCAGTCCACTTAAGCCACTGCGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAACTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTGTTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGACGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATGACATCCACTACAGCTTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCGTACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCGGAATAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAATGCTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAGACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTTTAAGCAAGTGCAGTTGCCAAAAAGAGAAAACTTAAATTGTATATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTTGAATAACGTTAAAATCTCTAATTTTTCCATAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64185511 4028 + 77229886 ---acacac----atacacgc---gtgcacgcacac--aca------------ca---------------cTAAAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGTAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGAGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAAGAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTC-TTTTTTGTCCTTATTCATTGCAAAATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCCAACTCAGTTTCAGGAATATCAATGTAGGCTGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCAGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAAAAGCTCAATAAACCACAAGGCAATAACAAGTATTAATATCCATCGCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGGATTGGAACTATCAATAAATCTGCAGCTGGAGACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCATCGTTTTTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAATGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATACCATTTCCCCATGTTGAGAGGCAGTGATTATTTCCCCAGCTGCATCACCAACCTCCTCGCCAGTCCACTTAAGCCACTGCGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAAGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAACTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTGTTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGACGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATGACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCGTACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCGGAATAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATTAATAATGCTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAGACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTTTAAGCAAGTGCAGTTGCCAAAAAGAGAAAACTTAAATTGTATATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTTGAATAACGTTAAAATCTCTAATTTTTCCATAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5405004 4034 + 17472758 ---acatac----atacacgc---gtgcacacacac--acacacacac-----ca---------------cTAAAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGTAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGAGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGCAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAAGAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAACATTGAATAAATCCATGCCCGA-GGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAAAATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCCAACTCAGTTTCAGGAATATCAATGTAGGCTGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAAAAGCTCAATAAACCACAAGGCAATAACAAGTATTAATATCCATCGCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGGATTGGAACTATCAATAAATCTGCAGCT-GAGACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCATCGTTTTTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAATGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATACCATTTCCCCATGTTGAGAGGCAGTGATTATTTCCCCAGCTGCATCACCAACCTCCTCGCCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAACTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTGTTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGTGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACCAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGACGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAGAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATGACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATGTTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAATAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAATGCTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAGACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTTTAAGCAAGTGCAGTTGCCAAAAAGAGAAAACTTAAATTGTATATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTTGAATAACGTTAAAATCTCTAATTTTTCCATAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139445505 4039 - 152096393 ---acacac----atacacga---gcgcacacgcac--acgcacacacacacaca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGAGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAGAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGGAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCAAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCTCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATATACAATGCCCTCATGGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAATGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAAAATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGTAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCCAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCAGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAAAAGCTCAATAAACCACAAGGCAATAACAAGTATTAATATCCATCGCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATTGGAACTATCAATAAATCTGCAGCTGGAGACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCATCGTTTTTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATAGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACCTCCTCGCCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAACTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGGAATGTGTGTATTTTTGCAGTACCATAATCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCCCCATTCTTTAAGATGAACTTATCTAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACGTACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATGACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATTATTATCTAATAAGTTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCAACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCGTGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGTGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAATGCTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAGACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAAAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGG--CAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGTTAAAATCTCTAATTTTTCCATAATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57395183 4019 + 70235451 ---acacac----acacacg-------------cat--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTATAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAATATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCACGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACCAGAATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCACACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTCTCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGGAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATAATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAAGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTGTCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTTAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTTACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCTAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTACGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGCAAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGATAAAGCAAACATCAATAATACTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTGAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGATGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGTTAAAATTTCTAATTTTTCCATAATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63086593 4019 - 75711847 ---acacac----acacacg-------------cat--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAAGATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTATAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAATATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCACGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACCAGAATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCACACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTCTCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGGAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATAATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTGTCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTTAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTTACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCTAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTACGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGCGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGATAAAGCAAACATCAATAATACTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTGAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGTTAAAATTTCTAATTTTTCCATAATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13645801 4019 - 18804593 ---acacac----acacacg-------------cat--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTATAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAATATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCACGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACCAGAATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCACACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTCTCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTACTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGGAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATAATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTATGTATTTTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTGTCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTTAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTTACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCTAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTACGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGCGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGATAAAGCAAACATCAATAATACTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTGAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTGGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGTTAAAATTTCTAATTTTTCCATAATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13257667 4021 + 18905526 ---acacac----acacacg-----------cacac--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCGATAAACTTTGGATATCCTAGGCGAGCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAATATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTATAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAATATATTGGGCCAGTTTACCCCTACTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCACGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACCAGAATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTCTCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATAATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAACACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTGTCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTTAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTTACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAATTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTACGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGCGAAAACTGCCCACTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGATAAAGCAAACATCAATAATACTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTGAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGTTAAACTTTCTAATTTTTCCATAATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60085963 4021 - 72318688 ---acacac----acacgcg-----------cgcgc--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTAGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGAGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTATAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAATATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCACGTGGTGTCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACCAGAATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAATGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACAGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTATCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGCGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAACACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTGTGTATTCTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTGTCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTTACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTACGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGCAAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGATAAAGCAAACATCAATAATACTAAGAATAATAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTGAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGTTAAAATTTCTAATTTTTCCATAATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 423035 4021 - 1517660 ---acacac----acacacg-----------cacac--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATATCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAATATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTATAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAATATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCCACGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACCAGAATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTCTCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATAATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATACACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAGCTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATTGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTGTCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTTAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTTACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAATTACATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTACGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTTTCTGTGTTTTAAACTGATCTATATCATCTGCGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGATAAAGCAAACATCAATAATACTAAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT-CCCTTAGGCATACATGTCAGATATGATGCTGAATGTGTTTCCCATCTGGTTAGTACAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCGAAGAACGCTAAAATTTCTAATTTTTCCATAATA i manLeu1.NW_012106698v1 I 2 C 0 s colAng1.NW_012115433v1 3519152 4022 + 6513552 ---acacac----acacacgc---g------cgcac--aca------------ca---------------cacaAGAATAAACAAACTCTT-CTGATTCATAGCCACAAAGTGGGTTGGGAAGTATTATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATTAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTCTGTTTCCAAACATTAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTAGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCCAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAAGGGTTCATACTCGAAAGCATAACCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTCGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAACATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGCTCCTAAAACTTCTTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTAAATTTTCTTTTTTTGTCCTTATTCATTGCAAAATATTGGGCCAGTTTACCCCTATTGGGTTCATGCAGATGGATGTTTTGCAAATGTAATTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAAGCATCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCTGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAAGTAATGACAACATCAGGAAGATCCACGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTCCCTCGGCCTCTGTCTTTGTCCATTTTGCACAAATGGGCTGACTACAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAATGCAATAACCAGTATTAGTATCCATCTCATTAGTTTTCTAAAAGAAAGGTAAAAACGCCACTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAATCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCCACACTGGCAAAGCCACCGAATCCCAGATAATTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATCGGAACTATCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTGGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTTTTAAATTCAGCGGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACTTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGGGAATTTAAGAGAAGCAAAGCACGATACACACTTTTCAGTCTCATCGCTGAAGAATAAGCAGACACGGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACCTCTTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCAAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAATATGGCTGAAAATGAACTATGTCATAAACAGCTCGTCCTCCCAACTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAGTTAGGAAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGCGGCTGTGGTGTGAGCTGGGGATCATACCAGATGTATTCGGTGTGAAGAGTACTCCACCTTTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAATGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATTACATCCACTACAGCCTGTTTCAATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATATTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATGATCTAATAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGAAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGTACTTTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAATACTGAGAATAGTAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGCTCCT--CCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAACATACAGTAAAGGCCTTG--ATAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATCCAGCTGACATTCAGTACATTCTAAGCAAGTGCAGTTGCCAGAAAGAGAAAACTTAAATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTGGAAGAACGTTAAAATTTCTAATTTTTCCATAATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105289190 4040 + 117903854 ---acacac----aaacacac---acacacacacac--ata------------cacacacacacaAGCATTGCAAGAATAAGCAAACTCTT-CTAATTCATATCCACAAAGTGGGTTGAGAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGTGTCCAGCAGATGTTTTCAATTACTTTAATTTCCTCTCTAGGCAAGTTCTGTTTCCAAACATGAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAGGTGGCGAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTTGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCGTACTCAAAAGCATAGGCTGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAGCATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTATAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAAGGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAAACAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCCGGCAAAGACTCTCTCCTTTTTAATTTTCTTTTTTTGTCCTTATTCATTGTAAAATATTGGGCCAGTTTACCCCTACTAGGTTCATGCAAATGGATGTTTTGCAAATGTAATTTTGTATCCTGGACTAAAGACTGTAACCAACCTCGGAGTAAACGAAAATGCCCACTACGGATATCTGACACCTTCCATTCACAGGCGTCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGTAGGGAGGTAATGACAATATCAGGAAGATCGATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTTCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGAGTGCAAGTGCTCCACACATCCAGAAGCTCAATAAACCATAAGGCAATAACAAGTATCAGTATCCATCGCATTAATTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGTAAAATAACCCTATCATGTCTTACGGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCAACACTGGCAAAGCCACCAAATCCCAGATAACTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACGATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATTGGAATTATCAATAAATCTGCAGCTGGAAACATTGATATAGGGCCCATAGAAGACATATGCAATTCTTGTGATTGTAGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTAGCCATAGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTGTACCTATTCATAAACCTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGAGAATTTAAGAGAAGCAAAGCACGATACACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACTGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGATGGAGCGAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCATGAATATGGCTGAAAATGAACTATGTCATACACAGCCCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTATTAGTTTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAATTAGGGAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGTGGCTGTGGTATGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTCTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCGGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTCTCTGGCCCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTATTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAGTAGAAACATCGTCTTTTCCATTACATCCACTACAACCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAACGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAGTAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAACTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCGTTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCACCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGCTTGGGTCTGAAATCTTGCACTCTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAACGCTAAGAATAGTAAATGTCCTGTAAACATTACCGCCATGATCCATGGGGGTGCTCCT-TCCTTAGGCATACATGTCAGATACGATGCTCAATGTGTCTCCCATCTGGTTAGTATAAAATATACAGTAAAGGCCTTG-AAGAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATTCAGCTGACATTCAGTTCATTCTAAGCAAGGGCAGTTGCCAAAAAGAGAAAATTTACATTGTGTATCTCTGTCCCTGG--CAGTTTTGCTTCC-----AGTAAAACTTCAAAGAATGTTAAAATCTCAAAATTTTCCATAATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19476696 4030 - 31320352 ---acacac----acacacat---acacacacaaac--aca------------cacac------------tacaAGAATAAACAAACTCTT-CTAATTCATATCTGCAAAGTGGGCTGGGAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCACAAACTTTGGATATCCTAGGCGATCCATCAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCCTCTCTAGGCAAGTTCTGTTTCCAAACATGAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAACAGGGATACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAGGCAGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAGCATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTATAATGCCCTCATCGAAGTTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAACGACTCTCTCCTTTTTAATTTTCTTTTTTTGTCCTTATTCGTTGTAAAATATTGGGCCAGTTTACCCCTACTAGGTTCATGCAAATGGATGTTTTGCAAATGTAATTTTGTATCCTGGACTAAAGACTGTAACCAACCTCGGAGTAAACGAAAATGCCCACTACGGACATCTGACACCTTCCATTCACAGGCGTCTACAAATGAGTCAATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCGATATGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTTCCTCGGCCTCCGTCCTTGACCATTTTGCACAAATGGGCTGAGTGCAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACAAGTATTAGTATCCATCGCATTAATTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAATTGCTATATTAAATTTAAATCCAAAAGGTAAAATAACCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCAACACTGGCAAAGCCACCAAATCCCAGATAACTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACGATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATTGGAATTATCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTAGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTAGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACCTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGAGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACTGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCGGTGATGATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGACGGAGCGAACACCAATACATTGTTAAGGTGGCTCAATTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCATGAATATGGCTGAAAATGAACTATGTCATACACAGCCCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTATTAGTTTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAATTAGGGAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGTGGCTGTGGTATGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTCTGGGCAGTCGAAGGAACCATTGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGACTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAGTAGAAACATTGTCTTTTCCATTACATCCACTACAACCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAGTAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCGTTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATACAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTCTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAGAAGTAGAGAAAGCAAACATCAATAACGCTAAGAATAGTAAATGTCCTGTAAACATTACCGCCATGATCCATGGGGGTGCTCCT-TCCTTAGGCATACATGTCAGATATGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAATGTACAGTAAAGGCCTTG-AAAAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATTCAGCTGACATTCAGTTCATTCTAAGCAAGTGCAGTTGCCAAAAAGAGAAAATTTACATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTTC-----AGTAAAACTTCAAAGAACGTTAAAATCTCAAAATTTTCCATAATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1672004 4018 + 2203405 ---acacac----acacacac---acacacaT--------------------------------------TACAAGAATAAACAAACTCTT-CTAATTCATATCTGCAAAGTGGGTTGGGAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCCTCTCTAGGCAAGTTCTGTTTCCAAACATGAGTATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAGGTGGCGAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCGAAAGCATAGGCAGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAGCATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTATAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTTAATTTTCTTTTTTTGTCCTTATTCATTGTAAAATATTGGGCCAGTTTACCCCTACTAGGTTCACGCAAATGGATGTTTTGCAAATGTAATTTTGTATCCTGGACTAAAGACTGTAACCAACCTCGGAGTAAACGAAAATGCCCACTACGGATATCTGACACCTTCCATTCACAGGCGTCTACAAATGAGTCAATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCGATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTTCCTCAGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGAGTGCAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAATGCAATAACAAGTATTAGTATCCATCGCATTAATTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTATATCCAAAGGGTAAAATAACCCTATCATGTCTTACAGGCTTTACTATTGCTTGAGCGCCCAAACCAAATCGGGTGATTTGGCCTTGATCAGCAACACTGGCAAAGCCACCAAATCCCAGATAACTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACGATAGAAACAACATGTTCGGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATTGGAATTATCAATAAATCTGCAGCTGGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGATTGTAGATTCCATCTGAAAGGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTAGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACTTATTCATAAACCTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTCTGAGAATTTAAGAGAAGCAAAGCACGATATACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACTGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACTTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCACGGCTTATTACACTGGCTTGAGGGTGATGGAGCGAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTAGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCATGAATATGGCTGAAAATGAACTATGTCATACACAGCCCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTATTAGTTTGTGTGTTTGGCATCCCAGCCCCATAAGTAACCACACCCCAATTAGGGAATGTGTGTATTTTTGCAGTACCATATTCAGCAGGTGGCTGTGGTATGAGCTGGGGATCATACCAGATGTATTCAGTGTGAAGAGTACTCCACCTCTGGGCAGTCGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCGGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGTGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCGTCAACAATATGATTCAGTAGAAACATCGTCTTTTCCATTACATCCACTACAACCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATAATTATCTAGTAAGTTATATAAAAAATCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCGTTCCACTTGGCAGCAAAATCAGCATGTTTTGGTGGAGGTAGGTAGTATGTGGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTCTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGGGAAAGCAAACATCAATAACACTAAGAATAGTAAATGTCCTGTAAACATTACCGCCATGATCCATGGGGGTGCTCCT-TCCTTAGGCATACATGTCAGATACGATGCTCAATGTGTTTCCCATCTGGTTAGTATAAAATATACAGTAAAGGCCTTG-AAAAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATTCAGCTGACATTCAGTTCATTCTAAGCAAGTGCAGTTGCCAAAAAGAGAAAATTTACATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCAAAGAATGTTAAAATCTCAAAATTTTCCATAATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3624563 4028 - 14941987 ---AAacac----acacacac---acacacacacac--aca------------caT--------------TACAAGAATAAACAAACTCTT-CTAATTCATATCTGCAAAGTGGGTTGGAAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGGCGATCCATCAGTGTCCAGCAGATGTTTTCAATTAGTTTAATTTCCTCTCTAGGCAAGTTCTGTTTCCAAACATGAGTATTGGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAGGTGGCGAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTAGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTAGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTATTTGCTAGCCACAAGTGAGACAACAGGGACACTGCATTTGATTTGGATTTTGATAATTCTTTCCTCAATGGTTCATACTCAAAAGCATAGGCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAATGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTATTGTACAGCATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTATAATGCCCTCATCGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTCCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAGTAAACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTTGACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTTAATTTTCTTTTTTTGTCCTTATTCATTGTAAAATATTGGGCCAGTTTACCCCTACTAGGTTCATGCAAATGGATGTTTTGCAAATGTAATTTTGTATCCTGGACTAAAGACTGTAACCAACCTCGGAGTAAACGAAAATGCCCACTACGGATATCTGACACCTTCCATTCACAGGCGTCTACAAATGAGTCGATTTCAAACTCAGTTTCAGGAATATCAATGTAGGCCGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATGACAACATCAGGAAGATCGATGTGGTGCCCTTCAGAAGACAAAGACTTCTTGCTTTCCTCGGCCTCTGTCCTTGTCCATTTTGCACAAATGGGCTGGGTGCAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATAACAAGTATTAGTATCCATCGCATTAATTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAAGGGTAAAATAACCCTATCATGTCTTACGGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCAGCAACACTGGCAAAGCCACCAAATCCCAGATAACTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACGATAGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATTGGAATTATCAATAAATCTGCAGCTAGAAACATTGATATATGGCCCATAAAAGACATATGCAATTCTTGTGACTGTAGATTCCATCTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTAGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACCTATATGGGATATATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATATGATCAACAACTAGCAGAGTTTGAGAATTTAAGAGAAGCAAAGTACGATATACACTTTTCAGTCTCATTGCTGAAGAATAAGCAGACACTGCTTCCCCACTCACAAATATCATTTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTAAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGACGGAGCGAACACCAATACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGTCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGCTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCATGAATATGGCTGAAAATGAACTATGTCATACACAGCCCGTCCCCCCAGCTTCCCAGATTTAAAAGACACAAAGGTATTAGTTTGTGTGTTTGGCAACCCAGCCCCATAAGTAACCACACCCCAATTAGGGAATGTGTGTATTTTCGCAGTACCATATTCAGCAGGTGGCTGTGGTATGAGCTGGGGATCATACCAGATGTATTCGGTGTGTAGAGTACTCCACCTCTGGGCAGTTGAAGGAACCATCGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACCAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGGAAGCCAGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATCTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCCAGAAAAACATACTGTGTGATGGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACGATATGACTCAGTAGAAACATCGTCTTTTCCATTACATCCACTACAACCTGTTTCCATATATTTGCTTTAGATCCTTTATCTACTCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTGGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAGTAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCTCCTGGTGCATTCTCTACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACATATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCGTTCCACTTGGCAGCAAAATCAGCATGCTTTGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGCACTCTCTGTGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAATAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACATCAATAACGCTAAGAATAGTAAATGTCCTGTAAACATTACCGCCATGATCCATGGGGGTGCTCCT-TCCTTAGGCATACATGTCAGATATGGTGCTCAACGTGTTTCCCATCTGGTTAGTATAAAATATACAGTAAAGGCCTTG-AAAAAAACAAAGACTGTAA---------ATCTGATATGCTGTGAAATTCAGCTGACATTCAGTTCATTCTAAGCAAGTGCAGTTGCCAAAAAGAGAAAATTTACATTGTGTATCTCTGTCCCTGGCACAGTTTTGCTTCC-----AGTAAAACTTCAAAGAATGTTAAAATCTCAAAATTTTCCATAATA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41539258 4030 + 83067054 -----atac----atacaccc---acacacatacatacaca------------cataG------------TACAAGAATAAACAAACTCTT-CTAATTCATATCCACAAAGTGGGTTGGGAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGATGATCCATCAGTGTCCAACAGATGTTTTCAATTACTTTAATTTCATCTCTAGGCAAATTTTGTTTCCAAACATTAATATTAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTGGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTGGTAGGCAGCAAATCTGCATTTATTCTCAATGCTGCTGCTGTGTTTGCTAGCCACAAATGAGACAACAGGGAGATTGCATTTGATTCGGATTTTGATAATTCTTTCCTCAATGATTCATACTCGAAAGCATAGTCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAGTGCTCTGGTACATTCTTCAAAGAGTAAAGACTTGGCTTACTACTATACAGCATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTACAATGCCCTCATCGAAGTTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAACGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGATAATAGACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGCGCCTTTCATTCTATTTCTTTGTTCTGGCAAAGACTCTCTCCTTCTTGATTTTCTTTTTTTGTCCTTATTCATTGTAAAATATTGGGCCAGTTTACCCCTACTGGGTTCATGAAGATGAATATTTTGCAAATGCAGTTTTGTGTCCTGGACTAAAGATTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTATGAATATCTGACGCCTTCCATTCACAGGCATCTATGAATGAGTCCATTTCAAATTCAGTTTCAGGGATATCTATGTAGGCTGTAGGAACCCTGATGTACAGAAAATCACTACTGTTGAAAAATAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATAACAACATCAGGAAGATCAATGTGGTGCCCTTCTGAAGACAAAGCCTTCTTGGTTGTCTTGGCTTCTGTCCTCCTCCATTTTGCACAGATGGGCTGAGTGCAAGTGCTCCATACATCCAGAAGCTCAATAAACCACAAAGCAATTACAAGTATTAGTATCCATCGCATTAACTTTCTAAAAGAAAGGTAAAAACGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAATGGGAAGATGACTCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGAGTTATTTGGTCTTGATCAGCCACATTGGCAAAGCCACCAAATCCCAGGTAACTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATGGAAACAACATGTTCAGTATTATTGACATTGAGAGATATCTGAAGGCCAGAATTGGAATTATCAATGAATCTGCAGCTGGAAACATTGACATACGGCCCATAAAAGACATATGCAATCCTCATAATTGTGGATTCCATGTGAAAAGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGTTCTGCTTCCTGTATACTAGCCATGGGACTACTGCCACGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCACACATCCATCATGGCACCATTATACCTATTCATAAACCTATATGGGATATATTTAAAGTCAATGTCCAGATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGTCTCTCAATGTGATCAACAACTAGCAGAGTTTGAGAATTTAAGAGAAGCAAAGCACGATATACACTTTTTAGTTTCATTGCTGAAGAATAAGCAGACACTGCTTCCCCACTCACAAATATCATTTCCCCATGTTGTGAGGCAGTGATAATTTCCCCAGCTGCATCCCCAACTTCCTCACCAGTCCACTTGAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACATTGGCTTGAGGGTGACGGAGCAAACACCAATACATTATTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACCTGTCCATTGGGGGCAAAAGTAAAAGAGTTCTGATCTGGATGTTCATGTCCTGGGTTAAAGCTTCTCCATCCATCAATCCAGGAGTATGGCTGAAAGTGAACTATGTCATACACAGCTCGTCCACCTAGTTTACCAGATTTAAAAGACACAAAAGTATTGGTCTGTGTGTTCGGCAACCCAGCCCCATAAGTGACAACACCCCAGTTAGGAAATGTGTGCATTTTTGCAGTGCCATATTCAGCAGGAGGCTGTGGGATGAGCTGGGGATCATACCAGATATATTCAGTGTGAAGAGTACTCCATCTCTGAGCAGTTGAAGGAACCATTGGTCCATCTTTAGGTCGGTGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGACAAACTTATCCAAGAAAACTAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGAAAGCCTGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATTTTTAACCAGTTATTCTCCAAGTTGTTGATGTTAAAATGGCGTTGAGCTAGAAAAACATACTGTGTGACTGATTTAGCTGTGTAGCTTCCATAGGCCACGCCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATCACATCCACTACAACTTGTTTCCATATATTTGCTTTAGATTCTTTATCTACCCCTGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTAGTAGCTTGGTGGTTATGGAGAAGCTGTTTACCCCATGAGCGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCTATTATTATCCAACAAGTTATACAAAAAGTCAAAGGCAGTTGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCATCCCCTGGTGCATTCTCAACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAATGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGAATGCTTGGGTGGAGGTAGGTAGTATGTCGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTGTTGTCTCATTGCTTGGATTTCTCTAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGTACTTTCTGCGTTTTAAACTGATCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGTTCACAGATTCCTCAAAAGTAGAAAAACCAAACATCAATAATGCTAAGAATAGGAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGTTCCTTTCCTTAGGCATACATGTCAAACAGAGTATTCAACGTGTTCCCCATTTGGTAATTATAAAACACACATTAAAGGCCTTG--ATAAAACAAAGACTGCAA---------ATCTTATATGCTGTGAAATCCTGCTGATGTCCGGCTCATTCTAATCAAGTGCAGTTGCCAAGGAGAGAAAACTTACACTGTGTATCTGTGTCCCTGGCACAGCTTTGCTTCC-----AATAAAACTTCAGGGAATTTTAAAGTCTCTAATTTCTCCATACTG i micMur3.chr19 I 18 I 14 s proCoq1.NW_012148742v1 1279389 4032 - 1406956 -----atacacagatacaccc---acacacatacat--aca------------caGAG------------TACAAGAATAAACAAACTCTT-CTAATTCATATCCACAAAGTGGGTTGGGAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGATGATCCATCAGTGTCCAACAGATGTTTTCAATTACTTTAATTTCATCTCTAGGCAAATTTTGTTTCCAAACATTAATATGAGTTGGTGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAAGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATTCTTTCAGTGGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTGGTAGGCAGCAAATCTGCATTTATTCTCAATGCTGCTGCTGTGTTTGCGAGCCACAAATGAGACAACAGGGAGACTGCACTTGATTTGGATTTTGATAATTCTTTTCTCAATGATTCATACTCAAAAGCATAGCCCGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTTGCTAAGTGCTCTGGTACATTCTTCAAAGAGTAAAGACTTGGCTTACTACTGTACAGCATTGAATAAATCCATGCCCGAGGGTCTCTTACTATGTATAATGCCCTCATCGAAGTTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAATGTCCAGCTTCCACTGCTTAAACTGAGCACAGGACGTGCACTTGGGTAATAGACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTTTATCAAAGGCGCCTTTCATTCTATTTCTTTGTTCTGGCAAAGACTCTCTCCTTCTTGATTTTCTTTTTTTGTCCTTATTCATTGTAAAATATTGGGCCAGTTTACCCCTACTGGGTTCATGGAGATGGATATTTTGCAAATGCAGTTTTGTGTCCTGGACTAAAGACTGCAACCAGCCTCGGAGTAAACGAAAATGCCCACTGCGGATATCTGACACCTTCCATTCACAGGCATCTACAAATGAGTCCATTTCAAATTCAGTTTCAGGGATATCTATGTAGGCTGTAGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCTCCTGAACCAGGAAGTGAGGTAATAACAACATCAGGAAGATCGATGCGATGCCCTTCTGAAGACAAAGACTTCTTGCTTGTCTTGGCTTCTGTCCTCCTCCATTTTGCACAGATGGGCTGAGTGCAAGTGCTCCACACATCCAGAAGCTCAATAAACCACAAGGCAATTACAAGTATTAGTATCCATCGCATTAACTTTCTAAAAGAAAGGTAAAACCGCCATTGGAAAGTTAAAATCACCAAGCTAATGCACAAAATTAATCCAACTGCTATATTAAATTTAAATCCAAATGGGAAGATGACTCTATCATGTCTTACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGGGTTATTTGGCCTTGATCGGCCACATTGGCAAAGCCACCAAATCCCAGGTAACTGAATCTTGTCTTCAGGTTATGGTAATCAGTTACAATGGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGGCCAGAATTGGAATTATCAATGAATCTGCAGCTGGAAACATTGACATATGGCCCATAAAAGACATATGCAATTCTCGTGATTGTGGATTCCATCTGAAATGTAACATTAATAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGTTCTGCTTCCTGTATACTAGCCATGGGACTATTGCCATGATGATCAAACCAAAACATTTTGTAGTGTGCATCCCATACATCCATCATGGCACCATTATACCTATTCATAAACCTATATGCGATATATTTAAAGTCAATGTCCAGATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGTCTCTCAATGTGATCAACAACTAGCAGAGTTTGAGAATTTAAGAGAAGCAAAGCACGATATACACTTTTTAGTCTCATTGCTGAAGAATAAGCAGACACTGCTTCCCCACTCACAAATATCATTTCCCCATGTTGTGAGGCAGTGATAATTTCCCCAGCTGCGTCCCCAACTTCCTCACCAGTCCACTTGAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACATTGGCTTGAGGGTGATGGAGCAAACACCAATACATTATTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGCCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGTTCATGCCCTGGGTTAAAGCTTCTCCATCCATCAATCCAGGAGTATGGCTGAAAGTGAACTATGTCATACACAGCTCGTCCGCCTAGTTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAACCCAGCCCCATAAGTGACAACACCCCAGTTAGGGAATGTGTGCATTTTTGCAGTGCCATATTCAGCAGGAGGCTGTGGGGTGAGCTGGGGATCATACCAGATATATTCAGTGTGAAGAGTACTCCACCTCTGGGCAGTTGAAGGAACCATTGGTCCATCTTTAGGTCGGTGTTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGCTGGCTTTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACAGTTCTTTGAAAGCCTGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATTTTTAACCAGTTATTCTCCAAGTTGTTGATATTAAAATGGCGTTGAGCCAGAAAAACATACTGTGTGACTGATTTAGCTGTGTAGCTTCCATAGGCCACACCTTCATCCAAAGAACCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATCACATCTACTACAACCTGTTTCCATATATTTGCTTTAGATTCTTTATCTACCCCTGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTCGTAGCTTGGTGGTTGTGGAGAAGCTGTTTGCCCCAGGAGCGGACCTTGGAATATTCATACATTTCCTCGGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCGATTATTATCTAATAAGTTATATAAAAAGTCAAAGGCAGTTGCAAAACCTGTTAAGGAATGACCAATTGGAACCTCATCCCCTGGTGCATTCTCAACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAACGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTGGGTGGAGGTAGGTAGTATGTCGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTGTTGTCTCATTGCTTGGATTTCTCCAGCATCAAAATATAAACTTGGATGGAGCATACTTTTCTTCAGC-TTTTGGTTGGGTCTGAAATCTTGTACTTTCTGTGTTTTAAACTGATCTATATCATCCGTGAAAACTGCCCATTCAGAGTAATTGTTCACAGATTCCTCAAAAGTAGAAAAACCAAACATCAATAATGCTAAGAATAGGAAATGTCCTGTAAACATTAACGCCATGATCCATGGGGGAGTTCCTTTCCTTAGGCATACATGTCAAACACGGTGCTCAATGTGTTTCCCATCTGGTAATTATAAAACATACATTAAAGGCCTTG--ATAAAACAAAGACTGCAA---------ATCTTATATGCTGTGAAATCTTGCTGACATTCAGCTCATTCTAATCAAGTGCAGTTGCCAAGGAGAGAAAACTTACACTGTGTATCTGTGTCCCTGGCATAGCTTTGTTTCC-----AATAAAACTTCAGGGAATTTTGAAGTCTCTTATTTCTCCATACTG i proCoq1.NW_012148742v1 I 17 I 4 s otoGar3.GL873546 11250903 4023 - 20685099 -----acac----acacacac---acacacacacac--aca------------caGAG------------TACAAGAATAAACAAACTCTT-CTAATCTGTATCCACAAAGTAGGTTGAGAAG---TATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGACGATCCATCAGTGTCCAACAGATGTTTTCAATCAGTTTAATTTCATCTCTAGGCAAATTTTGTTTCCAAACGTTAGTATTAGTGGGCGATATTTCCCCTTCATAAGGAAGGTAAAAAAGGTTTGTGGAAGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTGGTTTTCTGAGGAAAATGCACAATATCTTCAAACTTGACCAGCTGGTAGCTGGAAGGCAGCAAGTCTGTATTGATTCTCAGAGCCGCTGCTGTGTTTGCCAGCCACAAATGAGACAACAGGGCGACTGCGTTGGATTTGGATTTTGATAATTCTTTCCTCAATGATTCATACTCGAAAGCATAGCCCGAATTTAAGTTACATTTGCCTT---CTCCTTCAATTTTAAACAATTTTGCTAAGTGCTCCGGTACATTCTTCAAAGTGTAAAGACTTGGCTTACTACTGTACAGCATTGAATAAATCCATGACCGAGGGTCTCTTACTATATACAATGCCCTCATCGAAGTCCCTAAAACTTCCTGGAAAAACTGAAGCTTTAAAGTCCAGCTCCCACTGCTCAAACTGAGCACAGGACGTGCACTTGGGTAATAGACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCGTCTCTGTCAAAGGCGCCTTTCATTCTATTTCTTTGTTCTGGCAAAGACTCTCTCCTTCTCGACTTTCGTTTTTTGTCCTTATTCATTGTAAAATATTGGGCCAGTTTACCCCTGCTGGGTTCATGGAGGTGGATATTTTGCAAATGCAGTTTTGTGTCCTGGACTAAAGATTGCAACCAGCCTCGGAGTAAGCGAAAATGCCCACTGTGGACATCTGACACCTTCCATTCACAGGCATCTACGAATGAGTCAATTTCGAATTCAGTCTCAGGGATATCGATATAGGCTGTAGGAACCCTGATGTAGAGAAAGTCACTACTGTTGAAAAACAGCTGCTTGAGAATTTCAGCTCCTGAACCAGGCAGTGAGGTAATAACAACATCGGGAAGATCTCTGTGGTGCCCTTCTGAAGACAAAGCCTTCTTGCTCCCCGTGGCTTCTGTCCTCGTCCATTTTGCACAAATGGGCTGCGTGCAAGTGCTCCACACGTCCAGCAGCTCAATAAACCATAAGGCAACAACAAGTATTAGTATCCATCGCATTAACTTTCGAAAAGAAAGGTAAAATCGCCATTGGAAAGTTAAAATCACCAGGCTAATGCACAAAATTAATCCAACCGCTATATTAAATTTAAATCCAAAGGGGAAAATGACTCTATCGTGTCTCACAGGCTTTACTATTGCTTGAGTGCCCAAACCAAATCGAGTTATTTGGCCCTGATCAGCCACATTGGCAAAACCACCAAACCCCAGGTAATTGAATCTTGTTTTCAGGTTATGGTAATCAGTTACAATGGAAACAACATGTTCAGTATTATTGACATTGAGGGAAATCTGAAGCCCAGAATTAGAATTATCAATGAATCTGCAGCTGGACACATTGACATAGGGCCCATAAAAGACATAGGCAATTCTTGTGATTGTGGATTCCATCTGAAATGTCACATTAACGAATTGAGTCCATCGTTTCTTAAATTCAGCAGCTTGCTCTGCTTCCTGTATACTGGCCATGGGACTGTTGCCATGGTGATCAAACCAAAACATTTTGTAGTGCGCATCCCACACGTCCATCATGGCGCCGTTATACCTGTTCATAAACCTGTATGGGATGTATTTAAAATCGATATCCAGATTATGAAAGAAGGCACTGACAGAATTGATTGGGGAATCTTCTTGTCTCTCAATGTGATCAACAACTAGCAGAGTTTGAGAATTTAAGAGCAGCAAAGCACGGTACACACTTTTTAGTCTCATTGATGCAGAATACGCAGACACTGCTTCCCCACTCACAAATACCATTTCCCCGTGTTGTGAGGCAGTGATGATCTCCCCAGCTGCGTCACCAACTTCCTCACTGGTCCACTTCAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAAGGCTTATTACATTGGCTTGAGGGTGATGGAGCAAACACCAGTACATTGTTGAGGTGGCTCAGCTTGGGTCCATAGAGAGCTTCAGACACGAATACTTGCCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGTTCGTGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAGTACGGCTGAAAGTGAACTATGTCATACACAGCTCGTCCCCCTAGTTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTTGGCAGCCCTGCCCCATAAGTGACAACACCCCAGTTAGGGAATGTGTACAGCTTTGCAGTACCATATTCAGCAGGAGGCTGTGGGGTGAGCTGGGGATCGTACCAGATGTATTCAGTGTGAAGAGTGCTCCATCTCTGTGCAGTTGAAGGAACCATTGGTCCGTCTTTAGGCCGGTGCTTTCTAATTTGCTGAGCCAGCCAATTTCCAGCTCCATTCTTTAAGATGAACTTATCCAAGAAAACTAGTTGGCTCTCCGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACGGTTCTTTGAAAGCCTGGTAGAAGTGTGGCATAATAAAACCAAAAGTGCATTTTTAACCAGTTATTCTCAAAGTTATTGATCTTAAAATGTCGCTGGGCCAGAAAAACATACTGTGTGACTGACTTAGCCGTGTAGCTCCCATAGGCCACGCCTTCGTCCAAAGAGCCATCAACAATATGATTCAATAGAAACATTGTCTTTTCCATCACATCTACCACAACCTGTTTCCACAGATTTGCTTTCGATTCTTTATCTACCCCAGTCACCAAGGCCCCTGTGAGTAATGCTATCATATTGGTTGCTTGGTGGTTATGGAGAAGCTGTTTGCCCCATGGGCGGATTTTAGAGTACTCGTACATTTCCTCAGTAATAATCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATTATCTAATAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAGGGAATGGCCAATTGGAACCTCGTCCCCTGGTGCATTCTCAACTAGCCAGTCTTTGTAGCTCACCATCCTGTCCATATATTCCAAGACAAATTCAAAGGCAACTTTGTCTTCCGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCGTGCTTGGGTGGAGGTAGGTAGTACGCCGGGTTGGACAGCATAACTGTCACTGCGTTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGTGAGAGCGTTGTCTCATTACTTGGATGTCTCCAGCATCAAAATATAAACTTGGATGAAGCATGTTTTTCTTCAGC-TTTTGGTTAGGTCTGAAATCTTGTACTTTCTGCGTTTTAAACTGCTCTTCATCATCTGTGAAAACTACCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGAAAAACCAAACATCAATAATGCTAAGACTAGGAAATGTCCTGTAAACATCAACGCCATGATCCATGGGGT-GCCCCTTTCCTTAGGCATACACGTCAAACACAGAGCTTAATGTGTCTCCCATCTGCTAATTACAAGACATACATTAAA-GCCTCG--ACAAAACAAAGAATGCAG---------ATCGCATATGCTGAGCAATCCTGCTGACGTTCAGCTCATTCTAATCAAGCGCAGTTGCCAAGAGGAGAAAACTTACACTGTGTATCTGCGTCCCTGGCGCTGCTTTGCTTCC-----AGTAAAACTTCAGGGAATTTTAAGGTCTCTAGTTTCTCCATAATG i otoGar3.GL873546 I 4 C 0 s mm10.chr1 111859062 4009 + 195471971 ---ACACAC----GCACTCACTCTACACACATACAT--ACA------------TG---------------TACAAGAATAAACAAAGTTTT-CTAGTTCATATCCACAAAGTAGGTTGGGACA---CATTAGTGCAAATTT-TGCCGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGATGATCCATCAGTGTCCAGCAAATGTTTTCAATTAGTTTAATTTCATCTCTAGGCAAGTTTGTTTTCCAAATATTAGTATTAGATGGTGATATTTCCCCCTCATATGGAAGATAAAAAAGGTTTGTGGAAGTGGCAAATAGCATTTGGTTTAAACTAGCAGGAGACAAAGGAATGCCAAGGAAAGCAAAAATCCTTTCAGTAGTCTTCTGAGGAAAATGAACAATATCTTCAAACTTGACCAGATGGTAATTGGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCAGTGTTTGCTACCCACAAATGAGATAATAAGGAGATAGCATTTGATTGGGATATTTCTAATTCTTTCTTCAGTGATTCATACTCAAAAGCATAGCCAGAATTCGAATTACATTTGCTTTTACCTTCCTCTATTTTAAACAATTTTGCTAAGTGCTCTGGTACATTCTTCAAAGAATAAAGACTTGGTTTACTACCATATAGCACTGAATAGATCCAAGCTCGAGGGTCTCTTACTATGTACAATGCCCGCATTGAAGTTCCTAAAACTTCCTGAAAAAAATGAAGCTTCAATGTCCAGCTACCACTACTTAAGCTGAGCACAGGACGTGCACTTGGGTAATAAACAAGGTGTCTTCTTAAAGCCCTAATATATTCAGCATCTCTATCAAATGGTCCTTTTATTCTACTTCTTTGATCTTGCAAAGACTCCCTTCTTTTTAATTTTCGCTTTTTGTCCTTATTAGTTGTAAAATATTGGGCCAGTTTACTCCTACTGGTTTCATGTAGATGGATGTTTTGCAAGTGAAGTTTTGTATCCTGGACCAAAGACTGCAGCCACCCTCGAAGAAGATGAAAGTGCCCACTGCGGATATCTGATACTTTCCACTCACAAGCATCTACAAATGAGTCAATTTCAAATTCAGTTTCAGGGATATCCATGTAGGCTGTAGGAATTCTGATGTAGAGAAAATCACTGCTGTTGAAAAAAAGCTGTTTGAGAATTTCAGCTCCTGAACCAGGGAGTGAGGTAATAATAACATTAGGAAGATCCACATGATGCCCTTCAGAAATCATGACCTTCTCATTTGCCTTAGCTTCAGTCCTTGTCCATTTTGCACAGATGGGCTGAGTGCATGTACTCCATACATCCAGAAGCTCAATAAACCACAAGGCAATAACAAGTATTAATACACAGCGCATTAGCTTTCTAAAGGAAAGGTAAAACCGCCATTGAAAAGTTAAAATAACCAAACTAATACACAAAATGAATCCAACTGCTATATTAAATTTAAACCCAAAGGGGAAATTAACTTTATCATGTCTTACAGGGTTTACTATTTCTTGAGTACCCAAACCAAATCTGGTTATCTGTCCTTGATTAGCCACACTGGCAAAACCACCAAATCCCAGGTAACTGAATCTGCTTTTAAGGTTTTGATAGTCAGTTACAACAGACACACTATGTTCAGTACTGTTGACATGTAAAGAAATCTGAAGTCCAGAACTGGAACTATCAATAAATCTGCAGCTGGAAACATTGACATATGGCCCATAAAATACATAAGCAATTCTTGTGATTGTGGATTCCATATGAAATGTAACATTAACAAACTGTGTCCACCGTTTCTTAAATTCAGCAGCCTGTTCTGCTTCCTGTATATTAGCCACAGGACTGTTGCCATGGTGATCAAACCAAAACATTTTATAGTGTGCATCCCACACATCCATCATGGCACCATTATATCTATTCATAAACTTGTATGGGATGTATTTAAAATCAATATCCAAATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAAGTTTCTTGCCTTTCAATATGATCGACAACAAGCAGAGTTTGTGAATTTAAAAGAAGTAAAGCACGATAGACACTTTTCAGTCTCATGGCAGAAGAATAAGCAGACACTGCTTCCCCACTCACAAACATCCTATCACCATGTTGAGCAGCAGTAATAACTTCCCCAGCTGCATCACCAACCTCTTCCCCAGTCCACTTGAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTGATTACATTGACTTGATGGTGATGGGGCAAACACCAATACGTTGTTAAGGTGGCTCAATTTTGGTCCATAAAGAGCCTCAGAAACGAATACCTGCCCATTAGGAGCGAAAGTAAATGAATTTTGATCTGGATGTTCATGTCCTGGGTTAAAGCTTCTCCATCCATCAATCCAGGAATATGGCTGAAAGTGAACTATGTCATACACAGCTCGTCCTCCCAGTTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGGGTGTTTGGCAGCCCACCCCCATAAGTCACGACACCCCAGTTAGGAAATGTGTGCATTTTTGCAGTGCCAAAATCAACAGGAGGCTGTGGGGTGAGTGTTGGATCATACCAGATGTATTCAGTATGAAGAGTACTCCACCGCTGAGCAGTGGAAGGAACCATTGGTCCATCCTTAGGTCGATGCTTTCTAATTTGCTGAGCTAACCAATTTCCAGCTCCATTCTGTAAAATGAACTTATCCAAGAAAACTAGCTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATGCCTACAGTTCTTTGATAGCCTGGCAAAAGTGTAGCATAATAAAACCAAAAATGCATTTTTAGCCAGTTATTATCAAAGTTGTTGATGTTAAAATGGCGTTGTGCCAAAAAAACATACTGTGTAACTGATTTTGAGGTATAGCTTCCATAGGCCACACCTTCATCCAATGAGCCATCTACAATATGCTTCAAGAGAAACATAGTCTTTTCCATCACATCAACAACAACTTGTTTCCATATGTTTGCTTTAGATCCTTTATCTACTCCAGTAACCAAGGCCCCTATGAGTAAAGCTATCATATTTGTAGCTTGATGGTTATGAAGAAGTTGTTTGCCCCATGATCGAATCTTGGAATATTCATACATTTCCTCAGTAACAATCCAAATTTTTTCTAGGTATTTTTGTTTACGCTGATTACCTAATAGATTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAAGAATGGCCAACTGGAACCTCATCCCCTGGTGCATTCTCAACTAGCCAGTCTTTGTAGCTAACCATCCGATCCATGTATTCCATAACAAATTCAAAGGCAACCTTGTCTTCTGGGCATAATAAACAATACAATGCTAAAGGAGGAAGATTATTACCATAAATTTCATTCCACTTGGCAGCAAACTCAGCATGCTTGGGTGGAGGTAGGTAGTATGATGGATTGGACAGCATAATTGTCACTGCACTTTTGATAGCTCTAAAAATATGCAAATGGCTTGTACGAGACTTTTGTTTCAATGTTTGTATATCTCCAGCATCAAAATATAAATTTGGATGA---------------AGT-CTTCGGTTGAGTTTGAAATCTTGTATTTTCTGTGACTTAAGCCATTGTATATCGTCTGTGAAAACTGCCCATTCAGAATAATTGCTCACAGATTCTTCACAAGTAGAAAAACTACACATCATCAATGTTAAAAATAGTAAATGTTCTGTAAACATAAACGCCATGATCCATGGGGAAGATCTTTTCCTTAGGCATATGTGTTAAGCACA---------GTGTTTCCTATCTGGTTATTGTAAATTATATATTAAAGATGTAGCAAAAAAACAAAAACAAAAAACAGACTATACCTCATAGGCTGTGAAATCCAGGTGACATTCAGCTTATTCAAAGCAAGAAAAGTT---------AGGAAA-TTATATAGCATGTCTGTGTCCCTGGCACAGGTTTGCTTCCAATAAAATAAAATTTCAAGGAATATTAATGCCTCCAATGTCTCC--AATG i mm10.chr1 C 0 C 0 s canFam3.chr1 112329623 4030 - 122678785 ---acacgc----gcacacgc---acacacacacac--aca------------cacaTAG----------TACAAGAATAAACAAACTCTCGTTAATTCACATCCACAAACCGGGTTGCAAAG---TATTAGTGCAAATCTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGACGCTCCATCAGTGTCCAGCAGATGTTCTCAATCAATTTAATTTCATCTCTAGGCAGGTTTTGTTTCCAAACATTAGTATTAGTTGGTGATATCTCCCCTTCGTAGGGAAGATAGAAAAGGTTTGTGGAGGTGGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGTATTCCAAGAAAGGCAAAAATCCTTTCAGTGGTTTTCTGAGGAAAATGTACAATATCTTCAAACTTGATCAGCTGGTAGCTGGTAGGCAGCAAATCTGTATTTATTCTCAGGGCTGCTGCTGTGTTTGCCAGCCACAAATGAGACAACAGGGAGACTGCGTTTGACTTGGATTTTGATAATTCTTTCCTCAACGATTCATATTCGAAAGCATAGCCTGAATTTAAGTTACATTTGCCTTTACCTCCCTCTATTTTAAACAATTTAGCTAAGTGCTCTGGTACATTTTTCAAAGAGTAGAGACTTGGTTTACTACTGTACAGCATTGAATAAATCCATGCCCGAGGGTCCCTTACTATGTACAATGCCCTCATAGAAGCTCCTAAAACTTCCTGAAAAAAATGAAGCTTTAAGGTCCAGCTCCCGCTGCTTAAGCTGAGCACAGGACGTGCGGTTGGGTAATAGACCAGGTGTCTCCTCAAAGCCCTAATATATTCAGCATCTCTATCAAAGGTGCCTTTCATTCTACTTCTTTGTTCTGGCAAAGACTCTCTCCTTTTCAATTTTCTTTTCTTGTCCTTATTCGCTGTAAAATATTGGGCCAGTTTACCCCTACTGGGTTCATGCAGATGGATGTTTTGCAAATGTAGTTTCGTGTCTTGAACTAAGGACTGCAACCAGCCTCGGAGCAAACGGAAATGCACACCGTGGATATCAGATGCCTTCCATTCACAGGCGTCCACAAATGAGTCAATTTCAAATTCAGTTTCAGGAATATCGATGTAGGTTGTAGGAACTCTGATGTAGAGAAAATCACTACTGTTGAAAAAAAGTTGTTTGAGAATTTCAGCCCCCGAACCAGGAAGTGAGGTAATGACGACGTTGGGAAGATCGACGTGGTGCCCTTCGGAAGACAAAGACTTCAGGCTTGCCTCGGCCTCCGTCCTTGCCCATTTTGCACAGATGGGCTGAGTGCAAGTGCTCCACACATCCAGCAGCTCAATAAACCACAAGGCAATAACAAGGATTAGGATCCACCGCATTAGCTTTCTAAAAGAAAGGTAAAACCGCCACTGAAAGGTTAAAATCACCAAGCTAATGCACAAAATCAATCCGACTGCTATATTAAATTTAAATCCAAAGGGGAAAATAACCCTATCATGTCTTATGGGCTTTGCTATTGCTTGAGTGCCCAAACCAAATCGGGTTATCTGGCCCTGGTCAGCCACATTGGCAAAGCCGCCAAAACCCAGGTAATTGAACCTTGTCTTCAGGTTATGGTAGTCAGTTACGATGGAAACAACATGTTCAGTATTATTGACATTGAGAGAAATCTGAAGTCCAGAATTGGAATTATCGATAAATCTGCAGCTGGAAACATTGACATATGGCCCATAAAAGACATATGCAATTCTCGTGATCGTGGATTCCATCTGAAATGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGCTCTGCCTCTTGTATACTAGCAATGGGACTATTGCCACGATGGTCAAACCAGAACATTCTGTAGTGTGCATCCCACACATCCATCATGGCGCCATTGTACCTGTTCATAAACCTATATGGGATGTACTTAAAATCGATGTCCAGATTATGAAAGAAGGCACTGACAGATTTTATTGGGGAATTGTCTTGCCTCTCAACGTGATCAACAACCAGCAACGTTTGAGAATTTAAGAGAAGCAAAGCACGATACACACTTTTCAGCTTCATTGCTGAAGAGTAAGCAGACACAGCTTCCCCACTCACAAATATCATTTCTCCGTGTTGAGAGGCAGTAATGACTTCCCCTGCTGCATCACCAGCCTCCTCACCGGTCCACTTGAGCCACTGTGCACATTCTCCCAGTTGACCTTCCCAGGGCTTATTACACTGGCTTGTGGGTGATGGAGCAAACACCAGTACATTGTTAAGGTGGCTCAGCTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGCCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGTTCATGTCCTGGGTTAAAGCTTCTCCACCCATCAATCCAGGAGTATGGCTGAAAGTGAACTATGTCATACACAGCTCGCCCCCCTAGCTTCCCAGATTTAAAAGACACAAATGTATTGGTCTGTGTATTTGGCAACCCAGCTCCATAAGTGACAACACCCCAGTTAGGGAATATGTGCATTTTTGCAGTACCATATTCAGCAGGAGGCTGTGGGGTGAGCTGGGGATCATACCAGATGAATTCAGTGTGAAGAGTACTCCACCTCTGGGCAGTGGAGGGGACCATCGGTCCATCCTTAGGTCGGTGCCTTCTAATTTGCTGAGCTAACCAATTCCCAGCTCCATTCTTTAAGATAAACTTATCCAAAAACACCAACTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACGGTTCTTTGGAAGCCTGGTAAAAGGGTGGCATAATAGAACCAAAAGTGCATTTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGGCGCTGGGCTAGAAAAACATACTGTGTGACCGATTTAGCTGTGTAGCTTCCATAGGCCACGCCTTCATCCAGAGAACCATCAACAATGTGATTCAACAGAAACATGGTCTTTTCCATCACATCTACTACAACCTGTTTCCATATATTTGCTTTGGATCCTTTATCTACCCCAGTCACCAAAGCCCCGGTGAGTAATGCTACCATGTTAGTCGCCTGGTGATTATGGAGAAGTTGTTTGCCCCATGAACGGACCTTGGAATACTCATACATCTCCTCAGTAACAGCCCATATTTTTTCCAGGTATTTTTGTCTTCGATGATCATCTAGTAAGTTATATAAAAAGTCAAAGGCAGTGGCAAAGCCTGTTAAGGAATGGCCAACTGGAACCTCATCCCCTGGTGCATTCTCAACTAGCCAGTCTTTGTAGCCAACCATCCTGTCCATATATTCCAAGATAAACTCAAAGGCGACTTTGTCTTCTGGGCTTAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGCAGCAAAATCAGCATGCTTGGGTGGAGGTAGGTAGTATGTGGGGTTGGACAGCATAACTGTTACTGCACTTCTGATAGCTCGAAAGAGATGCAAATGGCTTGTACGAGACTTCTGTCTCATTGCCTGGATTTCTCCAGCATCAAAATATAAACTTGGATGAAGCATACTTTTCTTCAGC-TTGTGATTGGGTTTGAAATCTTGCACTTTCTGCGTCTTAAACTGATCTATATCATCTGTGAAAACTGCCCAGTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGAGAAAGCAAACACCACTAAAGCTAAAAATAAGAAATGTCCTGTAAACATTAACGCCATGATCCATCGGGGAGTTCCCTTCCTTAGGCATACATGTCAAACACAGTGCTCCGCGTATTTCCCATCTGCCTAGGATAAGACATACATTTAAGGCCTTG--ATAAAAC--AGACTGTAA---------ATCATACATGCTGTGAAATCCAGCTGCCATTCGGTTCATTCAAAGCAAGCAGGGTCGCCAAAAAGA-CAAACTTACAGCATCTATCTGTGTCCCTGACACAGTTTTGCTTCC-----AATAAAATCTCAAGGAACGTTAAAACCTCTAATGTTTCTGTATCA i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 504161 4021 - 2150887 ACTGCACAC----ACACACGC-----------------ACA------------CATTG------------TACAAGAATAAACACACTCTT-CTAATTCGTATCCACAAATTAGGCTGGAAAG---CATTAGTGCAAATTTCTGCTGACCTGCAGCATTTAGTCCATAAACTTTGGATATCCTAGACGATCCATAAGTGTCCAACAGATGCTTTCAATCAGTTTAATTTCATCCCTAGGCAAATTTTGTTTCCAAACATTAATATTGGTTGGAGATATTTCCCCTTCATAGGGAAGGTAAAAAAGGTTTGTGGAAGTAGCAAACAATATTTGGTTTAAACTAGCAGGAGACAAAGGAATTCCAAGAAAGGCAAAAATCCTTTCAGTGGTTTTCTGAGGAAAATGCACAATATCTTCAAACCTGACCAGCTGGTAGCTGGTAGGCAGCAAATCTGTATTTATTCTCAAGGCTGCTGCTGTGTTCGCCAGCCACAAATGAGACAACAGTGAGACTGCGTTTGATTGTGATTCTGATAATTCTTTCCTCAGTGATTCATACTCAAAAGCATAGCCTGAATTTAAGTTACATTTGCCTTTCCCTTCCTCTATTTTAAACAATTTCCCTAAGTGCCCTGGCACATTCTTCAAGGAGTAAAGACTTGGTTTACTACTGTACAGCATCGAATAAATCCATGCCCGAGGGTCCCTTACTACATACAATGCCCTCATTGAAGCACCTAAAACTTCTTGAAAAAAATGAAGCTTCAGTGTCCAGCTCCCACTGCTTAAACTGAGCACAGGCCGTGCGCTTGGGTAATAGACCAAGTGTCTCCTCAGAGCCCTAACGTACTCAGCATCTCTATCAAAGGCGCCTTTCGTTCTACTTCTTTGTTCTGGCAAGGACTCTCTCCTTCTTAACTTCCTTTTTTTGTCCTTATTTGCTGTAAAATATTGGGCCAGTTTACCCCTACTGGGTTCATGTAGATGGATGTTTTGCAAATGCAGTTTTGTGTCATGGACTAAGGACTGTAACCAGCCTTGGAGTAAACGAAAATGCCCACTGCGTATATCTGACACCTTCCATTCACAGGCATCTACAAACGAGTTGATTTCAAATTCAGTTTCAGGGATTCCAATGTAAGCTGTGGGAACCCTGATGTAGAGAAAATCACTACTGTTGAAAAAGAGTTGTTTGAGAATTTCGGCTCCTGAACCAGGAAGTGAGGTAATAACAACATCGGGAAGATCAACGTGGTGCCCCAAGGAAGACAAAGCTTTCTTGCTTGCCTCGGCCTCTTTCCGTGTCCATTTTGCACAGATGGGTTGAGTGCAAGTGCTCCACACATCCAGCAGCTCAATAAACCACAGGGCAATAACAAGGATTAATATCCATCGCATCAACTTTCTAAAAGAAAGATAAAAATGCCACTGAAAAGCTAGAATCACCAAACTAATGCACAAAATTAACCCAACTGCTACATTAAATTTAAATCCAAAGGGGAAAATAACTATATCACGTCTTAGAGGGTTTACTATTGCTTGAGTGCCCAAGCCAAATCGAGTTACTTGGCTTTGATCAGCCAAACTGGCATAGCCACCAAATCCCAGGTAGTTGAACCTTGTCTTCAGATTATGATAGTCAGTTACAATGGAAACAACATATTCAGTATTATTGACACTGAGAGAAATCTGAAGTCCAGACTTGGAATTATCAATAAATCTGCAGCTGGAGACATTGACATATGGCCCATAAAAGACATATGCAATTCTTGTAATTGTGGATTCCATCTGAAATGTAACATTAACAAATTGAGTCCACCGTTTCTTAAATTCAGCAGCTTGCTCTGCTTCCTGGATACTAGCCATGGGACTATTGCCACGATGATCAAACCAGAACATTTTGTAGTGAGCATCCCATACATCCATCATGGCACCATTATATCTGTTCATAAACTTATATGGGATGTATTTAAAATCAATATCCAGATTATGAAAGAAGGCACTGACAGAATTTATTGGGGAATCTTCTTGCCTCTCAATGTGATCAACAACGAGCAAAGTTTGGGAATTTAAGAGAAGCAAAGATCGATACACACTTTTCAGTTTCAGTGCTGAAGAATAAGCCGGTACTGCTTCCCCACTCACAAACATCATGTCCCCATGTTGAGAGGCAGTGATGATTTCCCCAGCTGCATCACCAACCTCCTCACCAGTCCACTTGAGCCACTGTGCACATTCTCCTAGCTGGCCTTCCCAGGGCTTATTACACTGGCTTGAGGGTGACGGAGCAAACACTAACACATTGTTAAGGTGGCTCAACTTGGGTCCATAGAGAGCTTCAGAAACAAATACTTGCCCATTGGGGGCAAAAGTAAATGAGTTCTGATCTGGATGTTCATGGCCTGGGTTAAAGCTTCTCCATCCATCAATCCAGGAGTATGGTTGAAAGTGAACTATGTCATACACAGCTCGGCCCCCTAGCTTCCCAGATTTAAAAGACACAAAGGTATTGGTCTGTGTGTTGGGCAACCCAGCCCCATAAGTGACAACACCCCAATTAGGGAATGTGTGCATTTTTGCTGTGCCATATTCAGCAGGAGGCTGGGGGGTGAGATGGGGATCATACCAGATGTATTCAGTATGAAGTGTACTCCACCTCTGGGCAGTAGAGGGAACCATAGGTCCATCCTTAGGTCGGTGCTTTCGAATTTGCTGGGCTAACCAATTTCCAGCTCCACTCTTTAAGATGAACTTATCCAAAAAAACAAGTTGGCTCTCTGGACCATAAAACCAATTATAATTGGAATCTGCTATACCCACTGTTCTTTGGAAGCCTGGTAAAAGAGTGGCATAATAGAACCAGAAGTGTGTTTTTAACCAGTTATTATCCAAGTTGTTGATATTAAAATGACGCTGGGCCAAGAAAACATACTGTGTGACTGACTTTGCTGTATAGCTACCATAGGCCACACCTTCGTCCAAAGAACCATCGACAATATGATTCAATAGAAACATCGTCTTTTCCATCACATCTACCACAACCTGTTTCCATATATTTGCTTTAGACTCTTTATCTAGCCCAGTCACCAGGGCCCCAGTGAGTAATGCTATCATATTAGTAGCCTGGTGGTTGTGGAGAAGTTGTTTGCCCCATGAACGGACCTTGGAATACTCATACATTTCCTCAGTAATAACCCATATTTTTTCCAGGTATTTTTGTCTTCTATGATTATCTAATAAATTATATAAAAAGTCAAAGGCAGTGGCAAAACCTGTTAAGGAATGGCCAATTGGAACCTCGTCCCCTGGAGCATTCTCAACTAGCCAGTCTTTGTAGCCAACCATCCGGTCCATATATTCAAGGACAAATTCAAAGGCAACTTTGTCTTCTGGGCATAACAAACAGTACAATGCTAAAGGAGGCAGATTGTTACCATAAATTTCATTCCACTTGGAAGCAAAATCAGCATGCTTGGGTGGAGGTAGGTAGTATGTTGGGTTGGACAGCATAACTGTCACTGCACTTCTGATAGCTCTAAAAAGATGCAAATGGCTTGTGCGAGACTTCTGTCTCATTGCTGGGATTTCTCCAGCATCAAAATATAAACTTGGACGAAGCACAGTTCTCTTCAGCTTTTTGGTTGAGTCTGAAATCTTGCACTTTCTGTGTCTTAAACTGGTCTATATCATCTGTGAAAACTGCCCATTCAGAGTAATTGCTCACAGATTCCTCAAAAGTAGAGAAATCAAACATCACTAATGCTAAAAATAGGAAATGTCCTGTAAACATTAACGCCATGATCCATCAGGGAGTTCTT-TCCTTAAGCATACATGTCAAATACAGTGTTCAATGCATTTCCCATATGGTGATTACAAAATACACATTTAAGGCCTTG--ATAAAACAAACACAGTAA---------ATCACATATACTGTGAAATCCAGCTGACATTCGGCTCATTCAAATCAAGTGCAGGTGCCAAAAAGAGAAAACTTACATTGTATATCTGTGTCCCTGTCACGGTTTTAATTCC-----AATAAAACTTCAAGGAATGTTAAAATCACTAATTTTTCCAAAATA i dasNov3.JH575754 C 0 C 0 a score=130952.000000 s hg38.chr18_GL383571v1_alt 160607 8 + 198278 CACAGGGA s panTro5.chr18 65070488 8 + 78221452 CACAGGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64189539 8 + 77229886 CACAGGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409038 8 + 17472758 CACAGGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139449544 8 - 152096393 CACAGGGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399202 8 + 70235451 CACAGGGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63090612 8 - 75711847 CACAGGGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13649820 8 - 18804593 CACAGGGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13261688 8 + 18905526 CACAGGGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60089984 8 - 72318688 CACAGGGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427056 8 - 1517660 CACAGGGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523174 8 + 6513552 CACAGGGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293230 8 + 117903854 CACAGGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19480726 8 - 31320352 CACAGGGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676022 8 + 2203405 CACAGGGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3628591 8 - 14941987 CACAGGGA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1283425 8 - 1406956 TCCAGGGA i proCoq1.NW_012148742v1 I 4 I 2 s otoGar3.GL873546 11254926 8 - 20685099 CACAGGCT i otoGar3.GL873546 C 0 I 2 s mm10.chr1 111863071 8 + 195471971 CACAGAAA i mm10.chr1 C 0 I 2 s canFam3.chr1 112333653 8 - 122678785 CACAGCAA i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 508182 8 - 2150887 CACAGAGA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41543288 14 + 83067054 I a score=8902589.000000 s hg38.chr18_GL383571v1_alt 160615 601 + 198278 AGTGATACAGGT--A---AAAAACACTATGAATTTAGCATTTACCTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGAACACACATTG--------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAGCACAGAAAACCATCACTGGTGATAAGCTCACC--ACACATGTATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATGAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACTTTTT-ATACTTCTTGTCTTGTGAATACGTTTTTCTTTCATTTATGAG-AGAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTTAAAAATT----CAAAATTCTTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAATCATGTTCACATCTTCTTTTATCAGCTTCATGTGTACAAACATAAAAATGGAATATCTTCAGTCACCTAGAT--A---CTTCTCGTCCGATCATG-AAGTAAC----CGCCAACGGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCTGCTCTTTTTTCATGACA--CT s panTro5.chr18 65070496 601 + 78221452 AGTGATACAGGT--A---AAAAACACTATGAATTTAGCATTTACCTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGAACACACATTG--------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAGCACAGAAAACCATCACTGGTGATAAGCTCACC--ACACATGTATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATGAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACTTTTT-ATACTTCTTGTCTTGTGAATACGTTTTTCTTTCATTTATGAG-AGAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTTAAAAATT----CAAAATTCTTGCCTTCATTTCAAA----TATTTTTCAGGCTTATTTACTCATCAG-----CCTATTATGACAAACAG-AAATCATGTTCACATCTTCTTTTATCAGCTTCATGTGTATAAACATAAAAATGGAATATCTTCAGTCACCTAGAT--A---CTTCTCGTCCGATCATG-AAGTAAC----CGCCAACGGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCTGCTCTTTTTTCATGACA--CT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64189547 601 + 77229886 AGTGATACAGGT--A---AAAAACACTATGAATTTAGCATTTACCTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGAACACACATTG--------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAGCACAGAAAACCATCACTGGTGATAAGCTCACC--ACACATGTATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATGAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACTTTTT-ATACTTCTTGTCTTGTGAATACGTTTTTCTTTCATTTATGAG-AGAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTTAAAAATT----CAAAATTCTTGCCTTCATTTCAAA----TATTTTTCAGGCTTATTTACTCATCAG-----CCTATTATGACAAAGAG-AAATCATGTTCACATCTTCTTTTATCAGCTTCATGTGTATAAACATAAAAATGGAATATCTTCAGTCACCTAGAT--A---CTTCTCGTCCGATCATG-AAGTAAC----CGCCAACGGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCTGCTCTTTTTTCATGACA--CT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409046 599 + 17472758 AGTGATACAGGT--A---AAAAACACTACGAATTTAGCATTTACCTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGAAACACACATTG--------------------TAAAA---AAAGAGAAAA------ACCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAGCACAGAAAACCATCACTGGTGATAAGCTCACC--ACACATGTATGATGCATTTGTGTATG-TTGCCCAAAGAAGATGATGAAGTACTGA-ATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACTTTTTAATACTTCTTGTCTTGTGAATACGTTTTTCTTTCATTTATGAG-AGAGAAACACCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTTAAAAATT----CAAAATTCTTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAATCATGTTCACATCTTCTTTTATCAGCTTCATGTGTATAAACATAAAAATGGAATCTCTTCAGTCACCTAGAT--A---C-TCTCGTCCGATCATG-AAGTAAC----CGCCAACGGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCTGCTCTTTTTTCATGACA--CT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139449552 602 - 152096393 AGTGATTCAGTT--A---AAAAACACTATGAATTTAGCATTTACCTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGAACACACATTG--------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAGCACAGAAAACTATCACTGGTGATAAGCTCACC--ACAGATGTATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCAAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACTTTTT-ATACTTCTTGTCTTGTGAATACGTTTTTCTTCCATTTATGAG-AGAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CAGAATTC-TGCCTTCATTTCAAA----TATTTCTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAATCATGTTCACATCTTCTTTTATCAGCTTCATGTGCATAACCATAAAAATGGAATCTCTTCAGTCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----CGCCAACGGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCTGTTCTTTTTTCATGACACTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399210 602 + 70235451 AGTGGTACAGTT--A---AAAAACACTATGAATTTAGCATTTACTTCCTTTACTTA---AATCTATTTAACACAAAGACTTGGAACACACATCGT-------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATATATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTTTCAACGTTTT-ATACTTCTTGTCTTGTGAAT--GTTTTTCTTCCATTTATGAG-AAAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAACCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCGGTTCTTTTTTCATGACACTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63090620 602 - 75711847 AGTGGTACAGTT--A---AAAAACACTATGAATTTAGCATTTACTTCCTTTACTTA---AATCTATTTAACACAAAGACTTGGAACACACATCGT-------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATATATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACGTTTT-ATACTTCTTGTCTTGTGAAT--GTTTTTCTTCCATTTATGAG-AAAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAACCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCGGTTCTTTTTTCATGACACTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13649828 602 - 18804593 AGTGGTACAGTT--A---AAAAACACTATGAATTTAGCATTTACTTCCTTTACTTA---AATCTATTTAACACAAAGACTTGGAACACACATCGT-------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATATATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACGTTTT-ATACTTCTTGTCTTGTGAAT--GTTTTTCTTCCATTTATGAG-AAAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TATTTTCCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAACCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----AGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCGGTTCTTTTTTCATGACACTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13261696 602 + 18905526 AGTGGTACAGTT--A---AAAAACACTATGAATTTAGCATTTACTTCCTTTACTTA---AATCTATTTAACACAAAGACTTGGAACACACATCGT-------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CCAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATATATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACGTTTT-ATACTTCTTGTCTTGTGAAT--GTTTTTCTTCCATTTATGAG-AAAGAAACATCCTCAATAAGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAACCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCGGTTCTTTTTTCATGACACTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60089992 602 - 72318688 AGTGGTACAGTT--A---AAAAACACTATGAATTTAGCATTTACTTCCTTTACTTA---AATCTATTTAACACAAAGACTTGGAACACACATCGT-------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATGTATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACGTTTT-ATATTTCTTGTCTTGTGAAT--GTTTTTCTTCCATTTACGAG-AAAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTTAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAACCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCGCTTCTGTTCTTTTTTCATGACACTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427064 601 - 1517660 AGTGGTACAGTT--A---AAAAACACTATGAATTTAGCATTTACTTCCTTTACTT----AATCTATTTAACACAAAGACTTGGAACACACATCGT-------------------TAAAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATATATGATGCATTTGTGTATGTTTGCCCAAAGAAGATGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACGTTTT-ATACTTCTTGTCTTGGGAAT--GTTTTTCTTCCATTTATGAG-AAAGAAACATCCTCAACAAGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACAAAGAG-AAACCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCGTCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCGGTTCTTTTTTCATGACACTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523182 602 + 6513552 AGTGGTACAGTT--A---AAAAACACTATGAATTCAGCATTTACTTCCTTTACTTA---AATCTATGTAACACAAAGACTTGGAACACACATTGT-------------------TAAAA---AAGGGGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAACATAGAAAACCATCACTGGTGATAAGTTCACC--ACACATGTATGATGCATTTGCGTATGTTTGCCCAAAGAAGACGATAAAGTACTGACATTCTTCGAGTGAGTGGACTCAGTTGT-CATTCCTCTCAACGTTTT-ATACTTCTTGTCTTGTGAAT--GTTTTTCTTCCATTTATGAG-AAAGAAACGTCCTCCACAGGTG-ATCAAAGTCTT-AGTTGGTT--TTAAAAAATT----CGAAATTCCTGCCTTCATTTCAAA----TATTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGATAAAGAG-AAATCATGTTCATATCTTCTTTTATCAGCTTCATGTGTATAACCATAAAAATGCAATCTCTTCAGCCACCTAGAT--A---CTTCTCATCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGTGAGGTCTCTCTTCTGTTCTTTTTTCATGACACTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293238 602 + 117903854 AGTGGTACCGTTAAA---AAAAACACTATGATTTAAGCACTTACTTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGGACACACATTGC--------------------AAAA---AAAGAGAAAA------CGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTAGCACAGAAACCCATCACTGGTGATAAAATCACC--ACGCATGTATGGTCCATTTGTGTATATCTGCCCAAAGATGATGATGAATTACTGACATTCCTGGAGTGAGTGGACTCGGTTGT-CATTTCTCTCAACTTTGT-ATACTTCTTGCCTTGTGAAT---TTTTTCTTCCATTTATGAG-ATAAAAACATCCTCAACAAGTG-GTCATAGTCTT-ACTGGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TGCTTTTCAGGCTTACTTACTCATCAG-----CCCATTACGACAAAGAG-AAATCATTTCCACGTCTTCTTTTATCAGCGCCATCTGTACAACTGTAAACATGGAATCCCTTCAGCCAGCTAGGT--A---CTTCTCGTCCAATCATG-AAGTGAG----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGGGAGGTCTCTCTTCTGTTCCTTTCTCATGACACTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19480734 599 - 31320352 AGTGTTACAGTT-AA---AAAAACACGACGAATTAAGTATTTACTTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGGAC-CACATTGT-----aaaaaaaaaaaaaaaaaaa---aaagagaaaa------CGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTACCACAGAAAACCATCACTGGTGATAAAATCTCC--ACGCATGTATGATCCATTTGTGTATGTCTGCCCCAAGATGAGGATGAATTACTGACATTCCTGGAGTGAGTGGACTCAGTTGT-CATTTCTCTCAACTTTGT-GTACTTGTTGCCTTGTGAAT---TTTTTCTTCCATTTATGAGAAAAAAAACATCCTCAACAAGTG-GTCAAAGTCTTAACTTGGTC--TCAAAAAATT----CGAAATTCCTGCCTTCATTTCAAA----CGTTTTTCAGGCTTACTTACTCATCAG-----CCTATTATGACCAAGAG-AAATCACCGTCACATCTTCTTCCATCCGCGTCCTCCGCAGGGCCGTGAGAACGGAATCCCTTGGGCCACCCAGGT--G---CCTCTCGT-----------------------CCAGCCGGGAAAGAGCA-TTCCCCTGTCGGCCACAGGGAGGTCTCTCTTCCGCTCCGTTCTCAGGACACTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676030 602 + 2203405 AGTGGTAGAGTT-AA---AAAAGCACTATGAATTAAGCATTTATTTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGGACGCACATTGT-------------------TAAAA---AAAGAGAAAA------CGCACTCC-AAAATTCAAATTAATA-GTCATTT------CTACCACAGAAAACCTTCACTGGTGATAAAATCACC--ACGCATGTATGATCCATTTGTGTATGTTTGCCCAAAGATGATGATGAATTACTGACATTCCTGGAGTGAGTGGACTCAGTTGT-CATTTCTCTCAACTTTTT-ATACTTCTTGCCTTGTGGAT---TTTTTCTTCCATTTATGAG-AGAAAAACATCCTCAACAAGTG-GTCAAAGTCTT-ACTTGGTT--TAAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TGTTTTTCAGGCTTACCTACTCATCAG-----CCTATTACGACAAAGAG-AAATCATTTTCACATCTTCTTTTACCAGCGTCATCTGTACAACTGTAAAAATGGAATCCCTTCAGCCACCTAGGT--A---CTTCTCGTCCAATCATG-AAGCAAC----TGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGGGAGGTCTCTCTTCTGTTCCTTTCTCATGACACTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3628599 602 - 14941987 AGTGGTACAGTT-AA---AAAAACACTATGAATTAAGCATTTACGTCCTTTACTTA---AATCTATTTAACACAAAGAGTTGGGACACACATTGT-------------------AAAAA---AAAGAGAAAA------CGCACTCC-AAAATTCAAATTAAGA-GTCATTT------CTACCATAGAAAACCATCACTGGTGATAAAATCACC--ACGCATGTATGATCCATTTGTGTATGTTTGCCCAAAGATGATGATGAATTACTGACATTCCTGGAGTGAGTGGACTCAGTTGT-CATTTCTCTCAACTTTTT-ATACTTCTTGTCTTGTGAAT---TTTTTCTTCCATTTATGAG-AGAAAAACATCCTCAACAAGTG-GTCAAAGTCTT-ACTTGGTT--TTAAAAAATT----CAAAATTCCTGCCTTCATTTCAAA----TGTTTTTCAGGCTTACTTACTCGTCAG-----CCTATTATGACAAAGAG-AAATCATTTTCACATCTTCTTTTATCAGCGTCATCTCTACAACTGTAAAAATGGAATCCCTTCGGCCACCTAGGT--A---CTTCTTGTCCAATCATG-AAGTAAC----CGCCAACTGGGAAAGAAAA-TTCCCCTTTCAGCAACAGGGAGGTCTCTCTTCTGTTCCTTTCTCATGACACTCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41543302 595 + 83067054 AGTAGTACAGCT--A---AAAAATACTGTAGATTCAGCATTTACTTCCTTTAAATA---AATCTATTTAACATGAAGAGTCGAAACATGAATTGT---------------------AAA---AAAGAGAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTC------CTAGCATAAAAAAACATCACTGGTAATAAACTCACC--ACAGATGTATGATGCATTTATGTGTGTTTGCCAGAAGATGCTGATAAAATACTGACATTCTTGGAGTGAGTGGACTCAGTTGT--ACTA---TTTGCTTTTT-ACACTTCTTGCTTTCTGAATTTTTTCTTCTTCCATTTTTGGG-AGAAAAACATCCTTAACAAGTG-TTCAAAGTCCT-ACTTGGTT--TAAAAAAAAT----AAAAATTCCTGCCTTCATTTCAAATCTGTCTTTCTCAGGCT----TACTCATCAG-----CCTATTGTGACACA-AG-AAAGCATTGTCATATCTTCTTTTATCAGCTTCATCTGTACAACTATAAAAATTTAATCTCTTCGGCCACCTAGAT--A---CTTCTCTTCCAACCATG-AAGTAAC----CACCAACAGGGAAAGAAAA-CTCCCCTTTCACCAACAGTGATATCTCTTTTCTGTTCCTTTTTCATGACACT-- i micMur3.chr19 I 14 I 2 s proCoq1.NW_012148742v1 1283435 592 - 1406956 AGTAGTACAGTT--A---AAAAATACTATAGATTCAGCATTTACTTCCCTTAAATA---AATCTATTAAACATGAAGAGTCGAAACACGAATTGT---------------------AAA---AAAG-GAAAA------AGCACTCC-AAAATTCAAATTAAGA-GTCATTC------CTAGCATAAAAAAGCATCACTGGTAATAAACCCACC--GCACATGTATGATGCATTTGTGTGTGTTTGCCAGAAGATGATGATAAAGTATTGACATTCTTGGAGTGAGTGGACTCAGTTGT--ACtactctttacttttt-atgcttcttgctttctgaattttttcttcttccattttTGGG-AGAAAAGCATCCTCAACAAGTG-TTCAAAGTCCT-ACTTGGTT--TTAAAAAAAT----CAAAATTCCTGCCTTCATTTCAAA----TCTTTCTCAGGCT----TACTCATCAG-----CCTATTGTGACAC--AG-AAAGCATTTTCATATCTTCTTTTATCAGCTTCATCTGTACAACTATAAAAATCTAATCTCTTCAGCCACCTAGAT--A---CTTCTCTTCCAATCATG-AAGTAAC----CACCAACAGGGAAAGAAAA-CTCCCCTTTCACCAACAGTGATGTCTTTTTTCTGTTCCTTTTTCGTGACACT-- i proCoq1.NW_012148742v1 I 2 I 285 s otoGar3.GL873546 11254936 594 - 20685099 AGCAGTACAGTT--A---AAAAATATTATGGATTCAGC-TTTACTTCCTTTAAATA---AATCGTTTTAACATGAAGAGTCAAAATACACATTGT---------------------AAA---AAAGAGAAAA------ATCACTCC-AAAATTCAAAATCAGAGGTCATTC------CTAGCATAAAGAAA-ACCACTAGC-ATAAATCAACC------ATGGATGATGCATTTACATGTGTTTGCCAGAAAA-GATGAGGAAGGCCTGACATTCGTGGAAGGAGTGAGCTCAGCTGT--GCTCCTGTCTGATCTTT-ATACTTCTTGTTTCATAAATGTTTTCTTCTTCCATTTTTGAG-AGAAAAACATCCTCAACAAGTG-CTCAAAGTCCT-ACTGGGTT--TCAAAAAAAGAAAACAAAACTCCTGCCCTCATTTCAAATCTGTCTTTTGCAGGCT----TGCTCATCAG-----CCTATTAGGACCC--AG-AAAGCATTTTCTCATCTTCTTTTATCAGCTTCATCTGTACAACTATAAAAATCTAATCTCTTCAGCCACCTAGTT--A---TTTCTCTTCCAATCATG-AAGTAAC----CACCAACTGGGAAAGAAAA-CTCCCTTTTCACCAACAGTGATGTCTCTTTTCTGCTCCTTTTTCATGACACT-- i otoGar3.GL873546 I 2 I 2 s mm10.chr1 111863081 554 + 195471971 AGTGGTCTAGTC--A---GAAAATACAACAAATCCAACATTTACTCCCTGTGTGTA---AATCTAATTAACA--------------------TGT---------------------GAA---AAAGAAAAAATTTTTTAAAATTCC-AAAATTCAAATGAA---GCCATTTGACCACGTAGCACAAGAAACCATCTGTAGTGATTAACTTACC--ACACATAAATGGTATGTTTCTGTATGTTCCCCAAAAGAAGATGATAAAGTACTGTCATTCTCAGAGTGTGCAGACTTCATTAT--TTTTTTCTCAGAGTCTG-AAGCATAATGATTTCTCAATTGTTTTTTCTTCCATTTTGGGG-AGGAAAATATTCTGAACAAATG-TTCAAAGTCCT-ACATGGTTGATAAGGGACAC----TGAAATTTCTGCCTTCATTTCAAA----CGTCTTTT----------------------------------------T-AAAGCGTTTCCAAATATCCTTTTATCAAGTTTATCTGTACCTGTAAAAGAATGTAATTTCTTCAAT-GTCTAGAT--G---CTCTTCTTCCAATCATGCCCACATC----CACCAAGTGGGTAAGAAAA-TTCCACTTTCA-CAACACTGAAGTCTGTTTTTTGTTCATTT-TCGTGTCACT-- i mm10.chr1 I 2 I 2 s canFam3.chr1 112333663 630 - 122678785 AGTGGTAGAGTC------AAATATACTAGGAATTCGGGATTTACTTCCTTTACATA---AATCT----AACACGAAGAGTCAAAACACACATTGTTTaaaaaaaaaaaaaaaaaaaaaa---aaaaaaaGTA------AGTACTCTAAAAATGCAAATTAAGAAACCATTC------CTAGGATAGGAAACCATGTCTGGTGATAAAATCACC---CACACAGATGATGCTGGTGCCTGCGTCTGCCCAAAGGAGCTGATGAAGTACTGAAATTCTTGAA----GTTGACTTGGTCGTTCTCCCCTTTCCACTTTTC-ACACTTG-TGCTTTGAAAATTTTTTCTTCTTCCATTTTTGGG-AAAAGAGCATCCTCCACAAGTGTTTCAAAGTCCT-ACTTGATT--TC-AAAAACT----CAAAATCTCTGCCCTCATTGCAAATCTGTCTCGTTCAGGCTTACTTACTCATCATCATCCCCCACGATGACCCAGAGAAAAGTATCTTCACGTCGTCCTTTGTCAGCTTCATCTGTTCAACTACGAAAATCTGATCTCTTCAGCCACCTAGGTTGG---CTTCTTTTCCAATCACG-AAGTAACCAAGCACCAACCGGGAAAGAAAACTTCCCCTTTCACCAAGGCTGACGGCTCTTTTCTGTTCCTTTCGCATGACACT-- i canFam3.chr1 I 2 I 2 s dasNov3.JH575754 508190 607 - 2150887 ATATATATAGAT--AGTCAGACATAATATAGATTCAATATTTCCTTCCTTTACATACATATTTTATCTAAAATGAAGAGTAGAATCATGTGTTGT-------------------AAAAAAGGAAGGAAAAAA------AGCACTAAAAAAATCCACATTAAGA-GTCTTTC------CTAA-ATTGAGAACCATCACTGGTGATGAATTCGCCAAACAAAAGTATGATGTATTTGTGT--GTTTCTCCAAAGAAGTTGTTGAAGTACTAGAATTCTTGGA----GTAGACTCAGTTGC-TATTCCTCTCAACATTTT-ACATATCTTGCTTTGAGAACTTTTTCTTCTTCCATTTTTGGG-AGAAAAACATCCTCAATACGTG-TTCAAAGTCCT-ACTTGGTT--TACAAAACAC----AAAAATTCCTGCTCTCATTTCAAATCTGTCTTTTTCTGGCT----TACTCATCAG-----GCTATTACAACCCA-AG-GAGGCATTTTCATGTTGTCTTTTACCATCTTCATCTGTACTACTGTAAAAAACTAATCTCTTCAGCCACCTAGAT--ATTTCTCCTCTTCCCATCATG-AAGTAAC----CATCGACTGGGAAGTAAAG-CTCCCGTTTCACCAAC--TGACGTCTCTTTTCTGTTCCTTTTTCATGACACT-- i dasNov3.JH575754 C 0 I 2 a score=139262.000000 s hg38.chr18_GL383571v1_alt 161216 9 + 198278 TTTCTGGGG s panTro5.chr18 65071097 9 + 78221452 TTTCTGGGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190148 9 + 77229886 TTTCTGGGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409645 9 + 17472758 TTTCTGGGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450154 9 - 152096393 TTTCTGGGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399812 9 + 70235451 TTTCTGGGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091222 9 - 75711847 TTTCTGGGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650430 9 - 18804593 TTTCTGGGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262298 9 + 18905526 TTTCTGGGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090594 9 - 72318688 TTTCTGGGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427665 9 - 1517660 TTTCTGGGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523784 9 + 6513552 TTTCTGGGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293840 9 + 117903854 TTTCTGGGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481333 9 - 31320352 TTTCTGGGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676632 9 + 2203405 TTTCTGGGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629201 9 - 14941987 TTTCTAGGG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41543899 9 + 83067054 TTTCTGGGG i micMur3.chr19 I 2 I 16 s otoGar3.GL873546 11255532 7 - 20685099 TTTCTGG-- i otoGar3.GL873546 I 2 C 0 s mm10.chr1 111863637 7 + 195471971 TCTCTGG-- i mm10.chr1 I 2 C 0 s canFam3.chr1 112334295 9 - 122678785 TTTCTGGAG i canFam3.chr1 I 2 I 17 s dasNov3.JH575754 508799 8 - 2150887 TTTCTGGG- i dasNov3.JH575754 I 2 C 0 e proCoq1.NW_012148742v1 1284027 285 - 1406956 I a score=212203.000000 s hg38.chr18_GL383571v1_alt 161225 16 + 198278 ATGGGGGACAAAATAA s panTro5.chr18 65071106 16 + 78221452 ATGGGGGACAAAATAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190157 16 + 77229886 ATGGGGGACAAAATAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409654 16 + 17472758 ATGGGGGACAAAATAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450163 16 - 152096393 GTGGGGGACAAAATAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399821 16 + 70235451 GTGGGGGACAAAACAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091231 16 - 75711847 GTGGGGGACAAAACAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650439 16 - 18804593 GTGGGGGACAAAACAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262307 16 + 18905526 GTGGGGGACAAAACAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090603 16 - 72318688 GTGGGGGACAAAACAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427674 16 - 1517660 GTGGGGGACAAAACAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523793 16 + 6513552 GTGGGGGACAAAACAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293849 16 + 117903854 GTGGGGGACAAAACAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481342 16 - 31320352 GTGGGGGACAAAACAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676641 16 + 2203405 ATGGGGGACAAAACAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629210 16 - 14941987 GTGGGGGACAAAACAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11255539 14 - 20685099 --GGGGGAAAAAACAG i otoGar3.GL873546 C 0 I 7 s mm10.chr1 111863644 16 + 195471971 GAGAAAAACAAAACAA i mm10.chr1 C 0 I 2 s canFam3.chr1 112334321 15 - 122678785 -aaagaaagaaaaaaa i canFam3.chr1 I 17 I 1 s dasNov3.JH575754 508807 14 - 2150887 --GGAAAACAAAACAA i dasNov3.JH575754 C 0 I 2 e micMur3.chr19 41543908 16 + 83067054 I e proCoq1.NW_012148742v1 1284027 285 - 1406956 I a score=613774.000000 s hg38.chr18_GL383571v1_alt 161241 42 + 198278 AAATTCTCTGAGGCTTCAGGTATGCTGAGAATGAATATAAAC s panTro5.chr18 65071122 42 + 78221452 AAATTCTCTGAGGCTTCAGGTATGCTGAGAATGAATATAAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190173 42 + 77229886 AAATTCTCTGAGGCTTCAGGTATGCTGAGAATGAATATAAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409670 42 + 17472758 AAATTCTCTGAGGCTTCAGGTATGCTGAGAATGAATATAAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450179 42 - 152096393 AAATTCTCTGAAGCTTCAGGTATGCTGAGAGTGAATATAAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399837 42 + 70235451 AAATTCTCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091247 42 - 75711847 AAATTCTCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650455 42 - 18804593 AAATTCTCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262323 42 + 18905526 AAATTCTCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090619 42 - 72318688 AAATTCTCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427690 42 - 1517660 AAATTCTCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523809 42 + 6513552 AAATTCTCTAAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293865 42 + 117903854 AAATTCGCTGAGGCTCCAGGTATGCTGACAGCGAACATACAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481358 42 - 31320352 AAATTCCCTGAGGCTCCAGGTACGCTGAGGGCGAACGTCAGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676657 42 + 2203405 AAATTATCTGAGGCTCCAGGTATGCTGAGAGTGAACATAAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629226 42 - 14941987 AAATTCTCTGAGGCTCCAGGTAGGCTGAGAGTGAACATAAAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41543924 42 + 83067054 AAATTCTCTGAGGCTACAGGTATGCTGGGAGTGTGTATATAT i micMur3.chr19 I 16 C 0 s otoGar3.GL873546 11255560 42 - 20685099 AAATTCTCTGAGGCTACAGGTATGCTGGCAGTGCACATAACC i otoGar3.GL873546 I 7 C 0 s mm10.chr1 111863662 31 + 195471971 CAAATTTCTAAG-----------ACTGAAAGTGGAGATAAAG i mm10.chr1 I 2 C 0 s canFam3.chr1 112334337 42 - 122678785 aaaTTCTCTGAGGCTACAGATACCCTGGGAGTGGACGCGAGC i canFam3.chr1 I 1 I 177 s dasNov3.JH575754 508823 42 - 2150887 AAATTCTCTGAGGTTACAGATATGCTAGGTGTAGATATAAAC i dasNov3.JH575754 I 2 C 0 e proCoq1.NW_012148742v1 1284027 285 - 1406956 I a score=846337.000000 s hg38.chr18_GL383571v1_alt 161283 75 + 198278 TGATGACTTAAACATTCTGCAATCACTTAATAGAAATTTTAGAATCACAGTAAAATCTCATA--------------TTATCTGCAA---CCT s panTro5.chr18 65071164 75 + 78221452 TGATGACTTAAACATTCTGCAATCACTTAATAGAAATTTTAGAATCACAGTAAAATCTCATA--------------TTATCTGCAA---CCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190215 75 + 77229886 TGATGACTTAAACATTCTGCAATCACTTAATAGAAATTTTAGAATCACAGTAAAATCTCATA--------------TTATCTGCAA---CCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409712 75 + 17472758 TGATGACTTAAACATTCTGCAATCACTTAATAGAAATTTTAGAATCACAGTAAAATCTCATA--------------TTATCTGCAA---CCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450221 75 - 152096393 TGATGACTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTAAAATCTCATA--------------TTATCTGCAA---CCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399879 75 + 70235451 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTGAAATCTCATA--------------TTATCTGCAA---CCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091289 75 - 75711847 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTGAAATCTCATA--------------TTATCTGCAA---CCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650497 75 - 18804593 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTGAAATCTCATA--------------TTATCTGCAA---CCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262365 75 + 18905526 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTGAAATCTCATA--------------TTATCTGCAA---CCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090661 75 - 72318688 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTGAAATCTCATA--------------TTATCTGCAA---CCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427732 75 - 1517660 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATCACAGTGAAATCTCATA--------------TTATCTGCAA---CCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523851 75 + 6513552 TGATAGCTTAAACATTCTGCAATCACTTGATAGAAATTTTAGAATGCCACTGAAATCTCATA--------------CTATCTGCAA---TCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293907 76 + 117903854 TGATGACTTAAACATTCCGCAATCACTTGATACAAATCTTAGAATCGCAGTAAAATCTCATA-------------ATTATCTACAG---CCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481400 92 - 31320352 TCAGGACTGGAGCTCTCTGCAGTCACTCGACACACATCTCAGCGTCACAGTGAAACCTCCCAGGCTCTGATCTCGGCTCTCTCCCGTCACCG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676699 75 + 2203405 TGATGACTTAAACATTCTGCAATCACTTGATACAAATTTTAGAATCACAGTAAAATCTCATA--------------TTATCTGCAA---CCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629268 75 - 14941987 TGATGACTTAAACATTCTGCAATCACTTGATACAAATTTTAGAATCAAGGTAAAATCTCGTA--------------TTATCTACAA---CCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41543966 74 + 83067054 CAATGATTGAAATATTCTGCATCT-CTTGATAGAAATTTTAGAATCACAATAAAATCTTACA--------------TTATATGAAA---CCT i micMur3.chr19 C 0 I 82 s otoGar3.GL873546 11255602 71 - 20685099 CAATGCCTGAAATATTCTACAGTT-CT--GTAG-AATTTTAGAATCCCAGTAAAATCTGACA--------------TTACATAAAA---TCG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863693 65 + 195471971 GGATGATTTATGTAGTTTT--GTCATTTGACAGAAATGTGAGAATCAAAGTAA-----CATA--------------TT---TCCAG---TCT i mm10.chr1 C 0 C 0 s dasNov3.JH575754 508865 71 - 2150887 TGGGAACTTCAATATTCTAGGATCAC--GATAGAAATTTCCGAATCACAATAAAATGT--TA--------------TTAAATACAA---TCT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1284027 285 - 1406956 I e canFam3.chr1 112334379 177 - 122678785 I a score=820216.000000 s hg38.chr18_GL383571v1_alt 161358 97 + 198278 AAGCTAGGGCAA-GTGA-TTTTTTTCTTATCCA--------TTTACACGCACTTATTTGG--------AAACCAGTGACCGTCAGCAGAAGACAAGCAACTAAC-AATACAAAATA s panTro5.chr18 65071239 97 + 78221452 AAGCTAGGGCAA-GTGA-TTTTTTTCTTATCCA--------TTTACACGCACTTATTTGG--------AAACCAGTGACCGTCAGCAGAAGACAAGCAACTAAT-AATACAAAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190290 97 + 77229886 AAGCTAGGGCAA-GTGA-TTTTTTTCTTACCCA--------TTTACACGCACTTATTTGG--------AAACCAGTGACCGTCAGCAGAAGACAAGCAACTAAT-AATACAAAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409787 97 + 17472758 AAGCTAGGGCAA-GTGA-TTTTTTTCTTATCCA--------TTTACACGCACTTATTTGG--------AAACCAGTGACCGTCAGCAGAAGACAAGCAACTAAT-AATACAAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450296 98 - 152096393 AAGCTAGGGCAA-GTGA-TTTTTTTCTTATCCA--------TGTAAATGCACTTATTTGG--------AACCCAATGACAGTCAGCAGAAGACAAGCAACTAATAAATACAAAATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57399954 97 + 70235451 AAGCTAGGGCAA-GGGA-TTTTTTGCTTATCCA--------TTTAAATGCACTTATTTGG--------AACCCAATGACCATCAGCACACGACAAGCAACTAAT-AATACAAAATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091364 97 - 75711847 AAGCTAGGGCAA-GGGA-TTTTTTTCTTATCCA--------TTTAAATGCACTTATTTGG--------AACCCAATGACCATCAGCACACGACAAGCAACTAAT-AATACAAAATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650572 97 - 18804593 AAGCTAGGGCAA-GGGA-TTTTTTTCTTATCCA--------TTTAAATGCACTTATTTGA--------AACCCAATGACCATCAGCACACGACAAGCAACTAAT-AATACAAAATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262440 97 + 18905526 AAGCTAGGGCAA-GGGA-TTTTTTTCTTATCCA--------TTTAAACGCACTTATTTGG--------AACCCAATGACCATCAGCAAACGACAAGCAACTAAT-ACTACAAAATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090736 95 - 72318688 AAGCTAGGGCAA-GGGA-TTTTTTTCT--TCCA--------TTTAAATGCACTTATTTGG--------AACCCAATGACCGTCAGCAAACGACAAGCAACTAAT-AATACAAAATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427807 97 - 1517660 AAGCTAGGGCAA-GGGA-TTTTTTTCTTATCCA--------TTTAAACGCACTTATTTGG--------AACCCAATGACCATCAGCAAACGACAAGCAACTAAT-AACACAAAATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3523926 97 + 6513552 AAGCTAGGGCAA-GTGA-TTTTTTTCTTATCCA--------TTTAAATGCACTTATTTGG--------AACCCAATGACCGTCAGCAGACGACAAGCAACTAAT-AATACAAAATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105293983 91 + 117903854 AAGCAAG--TGA------TTTTTTTCTTACCCC--------TTTAAATGCACTTGTTTGG--------AACCGAATGGCAGTCAGCAGACGACAGGCAACTAAC-AATCCACAGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481492 107 - 31320352 AAGCTAGCCCGACGGGTTTTCTTTTCTCACCCC--------TTTAAATGCACTTGTGTGGGACCGAACGACCGAACGACCGTCAGCAGACGGCACGCAACTCAC-AACCCCAAACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676774 98 + 2203405 AAGCTAGTGCAA-GTGATTTTTTTTCTTACCCA--------TTTAAATGCACTTGTTTGG--------AACCGAATGACCGTCAGCAGACGACAGTCAGCTAAC-AACACAAAATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629343 94 - 14941987 AAGCTAGCGCAA-GTGA-TTTTTTTCTTACCCA--------TTTAAATGCACTTATTTGG--------AACCGAATGACCGTCAGCAGA---CAAGCAACTAAC-AATACAAAATA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11255673 82 - 20685099 AAATTGGCTCAA-AGGA-TTGTTGTGTGACAGC--------TTTCAATGCCCATATCTGG--------ATCTCAATCAATGTTAGCAGATGCCAGGCGAC---------------- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863758 77 + 195471971 AACTTTTTTCTA-ATG--TTTTTTCCTTAT--A--------TTTGCAAACA--TATTTAG--------ATTCTAGTTAATATTGGCAGAGAAGAAACAAC---------------- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 508936 85 - 2150887 AGGTTAAAGTGA--TGC-TCCTTTTCGTTCTCACTACACTTTTCCCATGCACGTATTAGG--------ATTTCCGTGAATGTCATCAGGTGACAAG-------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544040 82 + 83067054 I e proCoq1.NW_012148742v1 1284027 285 - 1406956 I e canFam3.chr1 112334379 177 - 122678785 I a score=425686.000000 s hg38.chr18_GL383571v1_alt 161455 40 + 198278 TACAAGA-------TAGAACTCTCCCGACAATATCTATAGTTTAACG s panTro5.chr18 65071336 40 + 78221452 TACAAGA-------TAGAACTCTCCCGACAATATCTATAGTTTAACG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190387 40 + 77229886 TACAAGA-------TAGAACTCTCCCGACAATATCTATAGTTCAACG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409884 40 + 17472758 TACAAGA-------TAGAACTCTCCCGACAATATCTATAGTTTAACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450394 40 - 152096393 TACAAGA-------TAGAACTCTCCCGACAATATCTATAGTTTAACG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400051 40 + 70235451 TACAAGA-------TTGAATTCTCCCGACAATATCTATAGTTTAACG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091461 40 - 75711847 TACAAGA-------TTGAATTCTCTCGACAATATCTACAGTTTAACG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650669 40 - 18804593 TACAAGA-------TTGAATTCTCTCGACAATATCTACAGTTTAACG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262537 40 + 18905526 TACAAGA-------TTGAATTCTCCCGACAATATCTATAGTTTAACG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090831 40 - 72318688 TACAAGA-------TTGAATTCTCCCGACAATATGTATAGTTTAACG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427904 40 - 1517660 TACAAGA-------TTGAATTCTCCCGACAATATCTATAGTTTAACG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524023 40 + 6513552 TACAAGA-------TTGAATTCTCCAGACAATATCTATAGTTTAACG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294074 40 + 117903854 CACAAGC-------TCGAACTCTCCTGACAATTTCTAGAGTTTAACG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481599 47 - 31320352 CACAGGCTCCAAGATCGAGCCCCCCCGACAGTTTCCGGAGTTGAACG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676872 40 + 2203405 CACAAGA-------TCGAACTCTCCTGACAATTTCTAGAGTTTAACG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629437 40 - 14941987 CACAAGA-------TCGAACTCTCCTGACAATTTCCAGAGTTTAACG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544122 40 + 83067054 TACAAGA-------TATAACTCTCCCGACAGTATTTATATTTTAACG i micMur3.chr19 I 82 I 23 s otoGar3.GL873546 11255755 40 - 20685099 TACACGA-------TGTCAATCTCCTGACAGTATTCACATTTTAATG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863835 18 + 195471971 -ACAAGT----------------------------TATATTTCAGTG i mm10.chr1 C 0 C 0 s dasNov3.JH575754 509021 33 - 2150887 TAGAAGA-------TATAACTTTCCCGACAGTATCAAAGG------- i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1284027 285 - 1406956 I e canFam3.chr1 112334379 177 - 122678785 I a score=220104.000000 s hg38.chr18_GL383571v1_alt 161495 28 + 198278 CCACTAACGTGGCT----TCAGTCACTT----AAAA s panTro5.chr18 65071376 28 + 78221452 CCACTAACGTGGCT----TCAGTCACTT----AAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190427 28 + 77229886 CCACTAATGTGGCT----TCAGTCACTT----AAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409924 28 + 17472758 CCACTAACGTGGCT----TCAGTCACTG----AAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450434 28 - 152096393 CCACTAAAGTGGCG----TCAGTCACTT----AAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400091 27 + 70235451 CCACTAAAGTGTCT----TTAGTCACTT----AAA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091501 27 - 75711847 CCACTAAAGTGTCT----TTAGTCACTT----AAA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650709 27 - 18804593 CCACTAAAGTGTCT----TTAGTCACTT----AAA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262577 31 + 18905526 CCACCAAAGTGTCT----TTAGTCACTTAAAAAAA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090871 28 - 72318688 CCACCAAAGTGTCT----TTAGTCACTT----AAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427944 27 - 1517660 CCACTAAAGTGTCT----TTAGTCACTT----AAA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524063 28 + 6513552 CCACTAAAGTGTCT----TTGGTCACTT----AAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294114 28 + 117903854 CCACTAAGGCAGCT----TTCGTCACTT----AAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481646 28 - 31320352 CCACCCACGTGGCT----TCCGTCACTC----CAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676912 28 + 2203405 CCACTAAAGTGGCT----TTAGTCACTT----AAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629477 28 - 14941987 CCACTAAAGTGGCT----TTAGTCACTT----AAAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11255795 23 - 20685099 --------GTGGCTTGTGTTAATCACTT----AAA- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863853 20 + 195471971 -------TTTTGTT----TTAGCTATTT----AAA- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 509054 24 - 2150887 ---CTGGCCTGCAT----TTA-TTATTT----AAAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544162 23 + 83067054 I e proCoq1.NW_012148742v1 1284027 285 - 1406956 I e canFam3.chr1 112334379 177 - 122678785 I a score=2862.000000 s hg38.chr18_GL383571v1_alt 161523 4 + 198278 AA--TG- s panTro5.chr18 65071404 4 + 78221452 AA--TG- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190455 4 + 77229886 AA--TG- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409952 4 + 17472758 AA--TG- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450462 4 - 152096393 AA--TG- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400118 2 + 70235451 ----TG- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091528 2 - 75711847 ----TG- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650736 2 - 18804593 ----TG- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262608 2 + 18905526 ----TG- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090899 6 - 72318688 AAACTG- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427971 2 - 1517660 ----TG- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524091 4 + 6513552 AA--TG- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294142 3 + 117903854 A---TG- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481674 3 - 31320352 G---TG- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676940 3 + 2203405 A---TG- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629505 3 - 14941987 A---TG- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544185 4 + 83067054 AA--TG- i micMur3.chr19 I 23 C 0 s proCoq1.NW_012148742v1 1284312 4 - 1406956 AA--TG- i proCoq1.NW_012148742v1 I 285 C 0 s otoGar3.GL873546 11255818 4 - 20685099 AA--TG- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863873 4 + 195471971 --CATG- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 509078 4 - 2150887 -A--TGA i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112334379 177 - 122678785 I a score=1207871.000000 s hg38.chr18_GL383571v1_alt 161527 89 + 198278 TTTGTATTCAAATGCAGTTTACAC-AAAGATGAGTCCTGCTAT---CCTTG---TTATTTCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTGAAAG s panTro5.chr18 65071408 89 + 78221452 TTTGTATTCAAATGCAGTTTACAC-AAAGATGAGTCCTGCTAT---CCTTG---TTATTTCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190459 89 + 77229886 TTTGTATTCAAATGCAGTTTACAC-AAAGATGAGTCCTGCTAT---CCTTG---TTATTTCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5409956 89 + 17472758 TTTGTATTCAAATGCAGTTTACAC-AAAGATGAGTCCTGCTAT---CCTTG---TTATTTCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450466 89 - 152096393 TTTTTATTCAAATACAGTTTACAC-AAAGATGAATCCTGCTAT---CCTTG---TTATTTCTTGTTCTCAAGGACCAAGGGAC-----------AAAAAACTAAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400120 89 + 70235451 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091530 89 - 75711847 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650738 89 - 18804593 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262610 89 + 18905526 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090905 89 - 72318688 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 427973 89 - 1517660 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524095 89 + 6513552 TTTCTATTCAAATGCAGTTTACAG-AAAGATGAGTCCTACTAT---CCTTG---TTATTCCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAACTAAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294145 89 + 117903854 TTTTTATTCAAATGCAGTTTACAC-AAAGATGAGCCCTGCTCT---CTTTG---TTCTATCTTGTTCCCAAGGACCGAGGGAC-----------AAAGAAGTAAAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481677 89 - 31320352 TGTCCATTCGAACGCCGCTCACAC-AAACAGGAGTCCTGCTAC---CTTTG---TTCTATCTCGTTCCCCAGGCCCGAGGGGC-----------AGAAGAGTAAAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1676943 89 + 2203405 TTTTTATTCAAATGCAGTTTAAAC-AAAGATGAGCCCTGCTAT---CTTTG---TTATATCTTGTTCCCAAGGACCGAGGGAC-----------AAAAAAGTAAAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629508 89 - 14941987 TTTTTATTCAAACGCAGTTTACAC-AAAGATGAGTCCTGCTAT---CTTTG---TTACATCTTGTTTCCAAGGACCGAGGGAC-----------AAAAAAGTATAAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544189 91 + 83067054 TTTTTATTCAAATGCAGTTTACAC-AAAGATGAGTCTTG-TAT---CTTTCTTGTTATTTCTTGTTACAAAGGACTCAGGGAC-----------AAAAAGCTGAAAG i micMur3.chr19 C 0 I 34 s proCoq1.NW_012148742v1 1284316 91 - 1406956 TTTTTATTCAAATGCAGTTTACGC-AAAGATGAGTTTTG-TAT---CTTTCTTGTTATTCCTTGTTACAAAGGACTCAGGGAC-----------AAAAAAGTAAAAG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11255822 99 - 20685099 TTTTGATTCAAACGCAGTTCACAC-CAAGATGAGTCTTG-TGG---ATTTC---TTATGTCGTGTTACAAAAGACTCAGGAACAACAACAAAAAAAAAAAGTAAAAG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863877 70 + 195471971 TTTCTATCCACAAGTAATCACCAT-AAAGATGAATACAA-TAT---TCTTG---CTACTTT------------------GGTT-----------ATAAAGGTAAAAG i mm10.chr1 C 0 C 0 s canFam3.chr1 112334556 91 - 122678785 tttttATTCAAGCGCAGTTAACACGAAAGACGAGTCCCGCTCTCA-CCCTG---GCTGTTCTGGTCGCAGCGGGCTCAGGGAC-----------AAAAGGCAGGAG- i canFam3.chr1 I 177 C 0 s dasNov3.JH575754 509082 88 - 2150887 -TTTGATTCAAATGCAGTT-ACAC-AAAGATGAGTCCTGCTATTACTCTGG---TTATTTCCC-TTACAAACGACTCA-GAAT-----------AAAAACAGGAAAG i dasNov3.JH575754 C 0 C 0 a score=92208.000000 s hg38.chr18_GL383571v1_alt 161616 6 + 198278 TTGAAA s panTro5.chr18 65071497 6 + 78221452 TTGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190548 6 + 77229886 TTGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410045 6 + 17472758 TTGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450555 6 - 152096393 TTGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400209 6 + 70235451 TTGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091619 6 - 75711847 TTGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650827 6 - 18804593 TTGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262699 6 + 18905526 TTGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60090994 6 - 72318688 TTGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428062 6 - 1517660 TTGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524184 6 + 6513552 TTGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294234 6 + 117903854 TTGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481766 6 - 31320352 TTGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677032 6 + 2203405 TTGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629597 6 - 14941987 TTGAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1284407 6 - 1406956 CTGAAA i proCoq1.NW_012148742v1 C 0 I 41 s otoGar3.GL873546 11255921 6 - 20685099 CAGAAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863947 6 + 195471971 TCAAAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112334647 6 - 122678785 CTGGAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 509170 6 - 2150887 TGGAGA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544280 34 + 83067054 I a score=52382.000000 s hg38.chr18_GL383571v1_alt 161622 5 + 198278 AGATC s panTro5.chr18 65071503 5 + 78221452 AGATC i panTro5.chr18 C 0 I 4 s panPan2.chr18 64190554 5 + 77229886 AGATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410051 5 + 17472758 AGATC i gorGor5.CYUI01014964v1 C 0 I 2 s nomLeu3.chr4 139450561 5 - 152096393 AGATC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400215 5 + 70235451 AGACC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091625 5 - 75711847 AGACC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650833 5 - 18804593 AGACC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262705 5 + 18905526 AGACC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091000 5 - 72318688 AGACC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428068 5 - 1517660 AGACC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524190 5 + 6513552 AGACC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294240 5 + 117903854 AGACC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481772 5 - 31320352 GGCCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677038 5 + 2203405 AGACC i cebCap1.NW_016107689v1 C 0 I 15 s aotNan1.NW_018502140v1 3629603 5 - 14941987 AGACC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11255927 5 - 20685099 GGACC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863953 5 + 195471971 TGACC i mm10.chr1 C 0 C 0 s canFam3.chr1 112334653 5 - 122678785 GGGCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 509176 3 - 2150887 GGa-- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544280 34 + 83067054 I e proCoq1.NW_012148742v1 1284413 41 - 1406956 I a score=68941.000000 s hg38.chr18_GL383571v1_alt 161627 29 + 198278 tttttttttttttttttttttAA----------TTCCGG s panTro5.chr18 65071512 29 + 78221452 tttttttttttttttttttttAA----------TTCCGG i panTro5.chr18 I 4 C 0 s panPan2.chr18 64190559 20 + 77229886 ---------TTTTTTTTTTTAAA----------TTCCGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410058 29 + 17472758 tttttttttttttttttttttAA----------TTCCGG i gorGor5.CYUI01014964v1 I 2 C 0 s nomLeu3.chr4 139450566 21 - 152096393 --------TTTTTTTTTTTTAAA----------TTCCGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400220 17 + 70235451 ------------TTTATTTTAAA----------TTCCGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091630 17 - 75711847 ------------TTTATTTTAAA----------TTCCGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650838 17 - 18804593 ------------TTTATTTTAAA----------TTCCGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262710 17 + 18905526 ------------TTTATTTTAAA----------TCCCGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091005 17 - 72318688 ------------TTTATTTTAAA----------TTCCGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428073 17 - 1517660 ------------TTTATTTTAAA----------TTCCGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524195 17 + 6513552 ------------TTTTTTTTAAA----------TTCCGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294245 16 + 117903854 -------------GTTTTAAAAA----------TTCCGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481777 16 - 31320352 -------------TTTTTAAGCA----------TCCCGG i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3629608 14 - 14941987 -------------TTTTTAAAAA----------TTCC-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11255932 16 - 20685099 ----------TGTCTTTTTT-------------CTCCGG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863958 14 + 195471971 ---------------CTTTTAAA----------TTATGG i mm10.chr1 C 0 C 0 s canFam3.chr1 112334658 14 - 122678785 ---------------GTCTTGGC----------TTCCGG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 509179 23 - 2150887 ----------------tttaaaaatatatatatttaCGG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544280 34 + 83067054 I e proCoq1.NW_012148742v1 1284413 41 - 1406956 I e cebCap1.NW_016107689v1 1677043 15 + 2203405 I a score=117772.000000 s hg38.chr18_GL383571v1_alt 161656 14 + 198278 GGGAAGGTTTAGAG s panTro5.chr18 65071541 14 + 78221452 GGGAAGGTTTAGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190579 14 + 77229886 GGGAAGGTTTAGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410087 14 + 17472758 GGGAAGCTTTAGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450587 14 - 152096393 GGGAAGGTTTAGCG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400237 14 + 70235451 GGGAAGGTTTAGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091647 14 - 75711847 GGGAAGGTTTAGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650855 14 - 18804593 GGGAAGGTTTAGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262727 14 + 18905526 CGGAAGGTTTAGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091022 14 - 72318688 GGGAAGGTTTAGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428090 14 - 1517660 GGGAAGGTTTAGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524212 14 + 6513552 GGTAAGGTTTAGCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294261 12 + 117903854 --GAAGGTTTCGCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481793 12 - 31320352 --GGAGGTCTGGCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677058 14 + 2203405 GGGAAGGTTTCGCT i cebCap1.NW_016107689v1 I 15 C 0 s aotNan1.NW_018502140v1 3629622 14 - 14941987 GGGAAGGTTTCGCT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11255948 13 - 20685099 TGGAAAGTCTGCT- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863972 14 + 195471971 CCCAAAGTTTAGCT i mm10.chr1 C 0 C 0 s canFam3.chr1 112334672 14 - 122678785 TCGAGCCGTGAGCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 509202 14 - 2150887 TTGAAGGTTTGGCT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544280 34 + 83067054 I e proCoq1.NW_012148742v1 1284413 41 - 1406956 I a score=82371.000000 s hg38.chr18_GL383571v1_alt 161670 6 + 198278 TTCATG s panTro5.chr18 65071555 6 + 78221452 TTCATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190593 6 + 77229886 TTCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410101 6 + 17472758 TTCATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450601 6 - 152096393 TTCATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400251 6 + 70235451 TTCATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091661 6 - 75711847 TTCATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650869 6 - 18804593 TTCATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262741 6 + 18905526 TTCATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091036 6 - 72318688 TTCATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428104 6 - 1517660 TTCATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524226 6 + 6513552 TTCATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294273 6 + 117903854 CTCATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481805 6 - 31320352 TTCGCG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677072 6 + 2203405 TTCATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629636 6 - 14941987 TTCATG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544314 6 + 83067054 TTCATA i micMur3.chr19 I 34 C 0 s otoGar3.GL873546 11255961 6 - 20685099 TTCTTA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863986 6 + 195471971 TTTAAG i mm10.chr1 C 0 C 0 s canFam3.chr1 112334686 6 - 122678785 CCGACG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 509216 6 - 2150887 TTCACG i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1284413 41 - 1406956 I a score=628374.000000 s hg38.chr18_GL383571v1_alt 161676 52 + 198278 GGATCAGAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC s panTro5.chr18 65071561 52 + 78221452 GGATCAGAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190599 52 + 77229886 GGATCAGAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410107 52 + 17472758 GGATCAGAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450607 52 - 152096393 GGATCAGAAGGTATCTTCCTAATGAGAACTACTCGGATCAGTCACTT--TTCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400257 52 + 70235451 GGATCATAAGGTATCTTCCTAATGAGTACTACTCGGACCAGTCACTT--TTCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091667 52 - 75711847 GGATCATAAGGTATCTTCCTAATGAGTACTACTCGGACCAGTCACTT--TTCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650875 52 - 18804593 GGATCATAAGGTATCTTCCTAATGAGTACTACTCGGACCAGTCACTT--TTCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262747 52 + 18905526 GGATCATAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091042 52 - 72318688 GGATCATAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428110 52 - 1517660 GGATCATAAGGTATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524232 52 + 6513552 GGATCATAAGGCATCTTCCTAATGAGAACTACTCGGACCAGTCACTT--TTCTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294279 54 + 117903854 GGACCAGAATGCATCTTCCTAAAGAGAACGGCTCGGACCGGTCGTTTGTTTCTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481811 53 - 31320352 GGCCGAGCACGCACCCTCCCAAGGAG-GCTACGCGGGCCGGCCGTTTCCTTCCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677078 54 + 2203405 GGATCAGAATGCATCTTCCTAAAGAGAATTAATCGGACCAGTCGTTTTTTTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629642 54 - 14941987 GGATCAGAATGCATCTTCCTAAAGAGAACTACTCGGACCAGTCGTTTTTTTCTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544320 52 + 83067054 GGATCAGAAGGTATCTTCGTAATGAGAACTACTAAGATGAGTCACTT--TTCTC i micMur3.chr19 C 0 I 154 s proCoq1.NW_012148742v1 1284454 52 - 1406956 GGATCAGAAGGTATCTTCGTAATGAGAACTACTAAGACGAGTCACTT--TTCTC i proCoq1.NW_012148742v1 I 41 I 157 s otoGar3.GL873546 11255967 49 - 20685099 GGATCAGAA---ATGTTCATAATGACAACAACTGAGACCAGTCACTT--GTCTC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111863992 39 + 195471971 GAATGAAAAAGTAGCTTCACAA-------------GACAAGTCACTT--TTTTT i mm10.chr1 C 0 C 0 s canFam3.chr1 112334692 16 - 122678785 GGGCCGCAAGGTGCCT-------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 509222 52 - 2150887 GGATCAAAAGGTGTCCTTGTCACGGGCGATAGTGAGACGAGGCATTT--TTCTC i dasNov3.JH575754 C 0 C 0 a score=1540231.000000 s hg38.chr18_GL383571v1_alt 161728 159 + 198278 G-GCGGGGTAACCGCGA-ATCGTGACCAGGCGC--CAAGCCGAGGGGCGGGAGCTCCGCGCTCGGCGCTCACCTGTGGCC--------------------G-AGTC-C--CTGTCCTCAGGTGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGA----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG s panTro5.chr18 65071613 159 + 78221452 G-GCGGGGTAACCGCGA-ATCGTGACCAGGCGC--CAAGCCGAGGGGCGGTAGCTCCGCGCTCGGCGCTCACCTGTGGCC--------------------G-AGTC-C--CTGTCCTCAGGTGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGA----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190651 159 + 77229886 G-GCGGGGTAACCGCGA-ATCGTGACCAGGCGC--CAAGCCGAGGGGCGGTAGCTCCGCGCTCGGCGCTCACCTGTGGCC--------------------G-AGTC-C--CTGTCCTCAGGTGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGA----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410159 159 + 17472758 G-GCGGGGTAACCGCGA-ATCGTGACCAGGCGC--CAAGCCCAGGGGCGGTAGCTCCGCGCTCGGCGCTCACCTGTGGCC--------------------G-AGTC-C--CTGTCCTCAGGTGGAGCCGCCAGAGGGAGCTCGGACTCCGGTGTCGA----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450659 159 - 152096393 G-GCGGGGTAACCGCGA-ATCGTGACCAGGCGC--CAAGCCGAGGGACGGTAGCTCCGCGCTCGGCGCTCACCTGTGGCC--------------------G-AGTC-C--CTGTCCTCCGGCGGAGCCGCCAGAGGGAGCTCGGACCCTGGTGTCGG----AAA-ACGCCTC--TCCGT-ACCGGTCCGCGGCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400309 159 + 70235451 G-GTGGGGGAACCGCGA-ATCGTGACCAGGCGC--CAGGCCTAGGGGCGGTAGCTCCGTGCCTGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CTGTCCTCAGGCGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGG----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091719 159 - 75711847 G-GTGGGGGAACCGCGA-ATCGTGACCAGGCGC--CAGGCCTAGGGGCGGTAGCTCCGTGCCTGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CTGTGCTCAGGCGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGG----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13650927 159 - 18804593 G-GTGGGGGAACCGCGA-ATCGTGACCAGGCGC--CAGGCCTAGGGGCGGTAGCTTCGTGCCTGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CTGTCCTCAGGCGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGG----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262799 159 + 18905526 G-GTGGGGAAACCGCGA-ATCGTGACCAGGCGC--CAGGCCTAGGGGCGGTAGCTCCGTGCCTGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CTGTCCTCAGGCGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGG----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091094 159 - 72318688 G-GTGGGGGAACCGCGA-ATCGTGACCAGGCGC--CAGGCCTAGGGGCGGTAGCTCCGTGCCTGGCGCTCACCTGTGGCC--------------------G-CGTC-T--CTGTCCTCAGGCGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGA----AAG-ACGCCTC--TCCAT-GCCCGTCCGCGGCTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428162 179 - 1517660 G-GTGGGGGAACGGCGA-ATCGTGACCAGGCGC--CAGGCCTAGGGGCGGTAGCTCCGTGCCTGGCGCTCACCTGTGGCCGCGTCCCTGTCCTCAGGCGGG-CGTC-C--CTGTCCTCAGGCGGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGA----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524284 159 + 6513552 G-GTGGGGGAACCGCGA-ATCGTGACCAGGCGC--CAGGCCGAGGGGCGGTAGCTCCGTGCCTGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CTGTCCTCAGGCAGAGCCGCCAGAGGGAGCTCGGACCCCGGTGTCGG----AAG-ACGCCTC--TCCGT-GCCCGTCCGCGGCTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294333 153 + 117903854 TGG-----GAACC-CAA-ATCGTGACCCCGCGC--CAGGCCGAGGGGCGGCCGCTCGGCGCCCGGCGCTCACCTGTAGCC--------------------G-CGTC-C--CCGTCCTCA-GCGGAGCCGCCAGAGGGAGCTCGTACCCCGGTGTCGG----GAG-CCGCCTC--TCCGT-GCCCGTCCGCGGCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481864 103 - 31320352 G----------------------------------------------------------GCCCGGCGCTCACCTGTGGCC--------------------G-CGT--C--CCGTCGTCC-GCGGAGCCGCCAGGGGGAGCTCGCAGCGCGGGGTCGG----GGG-CCGCCTC--TGCGC-GCCCGCGCGCGGCTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677132 158 + 2203405 CGGCGGGAGAACC-CAA-ATCGTGACCCGGCGC--CAGGCCGAGGGGCGGCAGCTCCGCGCCCGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CCGTCCTCA-GCGGAGCCGCCAGAGGGAGCTCGTACCCCGGTGTCGG----GAG-CCGCCTC--TCCGC-GCCCGTCCGCGGCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629696 157 - 14941987 G-GCGGGGGAACC-CAA-ATCCTGACCCGGCGC--CAGGCCGAGGGGCGGCAGCTCCGCGCCCGGCGCTCACCTGTGGCC--------------------G-CGTC-C--CCGTCCTCA-GCGGAGCCGCCAGAGGGAGCTCGTACCCCGGTGTCGG----GAG-CCGCCTC--TCCGT-GCCCGTCCGCGGCTG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11256016 155 - 20685099 -AGAGGAGAAATCACGACACTGTGTCCGGGCA---------GAGGAGCAGCAGCTCCCCGCA-GCCTCTCACCTGTAGCC--------------------T-CCTC-CAAACGTCCCTCAGAGGCGCCGCCAGAGGGAGCTCAGACCCAGACTTAAG----GAG-CAGCCTC--TCCTTCGCCCGTCCCCGGTTT i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111864031 157 + 195471971 --TTGGACAAATCACAA-ATGG----CAGTTGG--AAGGCAGAAAAAAGGCACTGTTGACTCAGATGCTCACCTGTGGCT--------------------GTCGTC-A--ACATCCTCCCCACGAGCCGCCAGAGGGCGTTCACACCCAGGTTTAAG----GAGCAGGCCTA--TCCTTTGCCCATCTTGGATTT i mm10.chr1 C 0 I 1 s canFam3.chr1 112334708 119 - 122678785 -----------CCGCGA-G-----------------GGGCCCCGCGGCGGC----------------CTCACCTGTGGCC--------------------C-CGCCGT--CCATCCCGGCCCGACGCCGCCAGGGGGAGCTGAGACCCCGGCTACGGCGCAGCG-TCGCCTC--T-----GCCCGGCCGCGGCTC i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 509274 155 - 2150887 --------AAAAGAGGA-ATCACGACCAGGCGTGGGAGACAGAGGAAACGCAGTCCCGCTCCCAC--CTCACCTGTAGCC--------------------T-CACGGC--GCAGCCTTACCAGGCGCCACCAGAGGGCGCGCACACCAAGACTGAGG----GCG-CAGCTGCAGCCTGC-GCCCGTCTGGGGGCT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41544372 154 + 83067054 I e proCoq1.NW_012148742v1 1284506 157 - 1406956 I a score=2090820.000000 s hg38.chr18_GL383571v1_alt 161887 125 + 198278 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC s panTro5.chr18 65071772 125 + 78221452 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190810 125 + 77229886 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410318 125 + 17472758 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450818 124 - 152096393 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTTTCGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCA-TTTTTC---------ACTGGCGTTCTCCGACCCTGCCGCCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400468 125 + 70235451 GAAGAATCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCCGCCGCCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63091878 125 - 75711847 GAAGAATCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCCGCCGCCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651086 125 - 18804593 GAAGAATCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCCGCCGCCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13262958 125 + 18905526 GAAGAATCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCCGCCGCCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091253 125 - 72318688 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428341 125 - 1517660 GAAGAATCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCCGCCGCCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524443 125 + 6513552 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCAGGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294486 125 + 117903854 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCT-CCTCTGTGGGAAACATTCCGGCGAGGAGTTTCCCGATCCGCCCCGCCTGTTGCATGTTTTC---------ACTGGCGTCCTCCGACCCTGCCGCCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19481967 125 - 31320352 GAAGAGCCTCAGCAAGTTTCAGCGCTGGCCGAGCCTCC-CCTCCGCAGGAAACGCGCCGGCGAGGACTTTCCCGAGCCGCCCCGCCTGTTGCATGTCCTC---------GCCGGCGTCCTCCGACCCTGCCGCCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677290 125 + 2203405 GAAGAGCCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCCGGCGAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ATTGGCGTCCTCCGACCCTGCCGCCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629853 125 - 14941987 AAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTCCTGCGAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTC---------ATTGGCGTCCTCCGACCCTGCCGTCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544526 126 + 83067054 GAAGAACCTAACCAAGTTTCAGTCTTGGACAAGTCTCC-CCTCTGTAGGAAACATTAACGCTAGGAGTTTCCTGATCCGCCCCGCCTGTTGCATTTTTTT--------AATTCGTGTCCTACGAACATGCCTCCA i micMur3.chr19 I 154 C 0 s proCoq1.NW_012148742v1 1284663 126 - 1406956 GAAGAACCTAACCAAGTTTCAGTCTTGGACAAGTCTTC-TCTCTGTAGGAAACATTAACGCTAGGAGTTTCCTGATCCGCCCCTCCTGTTGCATTTTTTT--------AATTCGTGTCCTACGAACATGCCGCCA i proCoq1.NW_012148742v1 I 157 C 0 s otoGar3.GL873546 11256172 124 - 20685099 GAAGAACCTAAGCAAGTTTCAGTCTTGGACAAGTCTCC-TCTCTGCAGGAAACATTAACGCTAGGAGTTTCCTGATCCGCCCTGCCTGTTGCATTTTTTC---------ATTCGTGTCCTACCAATGTGCTTCT- i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111864189 126 + 195471971 GAAGAAACTCACCAAGTTTCGATCTTAGACAAGTCTCCTCCTCTGTAGGAAACAAACACTTCTAGTAGTTCCTGACTTGACCCGCCTGTTGCATATTTTA---------ATTCCTTTCTTCAGAACGCATCGTCC i mm10.chr1 I 1 C 0 s canFam3.chr1 112334828 131 - 122678785 GCAGAACCTCACCAAGTTTCAGTCCAGGACAAGTCT---CCTCCGCAGGAAACACGAACGCC-GGAGTTTCCTGCACCGCCCCGCCTGTTGCATTTTTTCTCCCTCCCCGTTCGCCTCCTACGGTCGTGCCGCCC i canFam3.chr1 I 1 M 868 s dasNov3.JH575754 509429 124 - 2150887 GAAGAATCTAACTAAGTTTCGGTCTTGAGCAAGTCTCC-TCACTGCGCGGAACGTGAACGC-AGGAGTTTCCAGACCCGCCCCGCCTGTTGCATTTTTTT---------CTCCAGTTCCCACGAACATGCCTCCA i dasNov3.JH575754 C 0 C 0 a score=303873.000000 s hg38.chr18_GL383571v1_alt 162012 19 + 198278 CCATTCTCCGCTCCCCGCT s panTro5.chr18 65071897 19 + 78221452 CCATTCTCCGCTCCCCGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190935 19 + 77229886 CCATTCTCCGCTCCCCGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410443 19 + 17472758 CCATTCTCCGCTCCCCGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450942 19 - 152096393 CCATTCTCCGCTCCCCGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400593 19 + 70235451 CCATGCTCCGCTCCCCGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092003 19 - 75711847 CCATGCTCCGCTCCCCGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651211 19 - 18804593 CCATGCTCCGCTCCCCGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263083 19 + 18905526 CCATGCTCCGCTCCCCGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091378 19 - 72318688 CCATGCTCCGCTCCCCGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428466 19 - 1517660 CCATGCTCCGCTCCCCGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524568 19 + 6513552 CCATGCTCCGCTCCCCGCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294611 19 + 117903854 CCAAGCTCCGCTCCCCGCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482092 19 - 31320352 CCGGGCTCCGCTCCCCGCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677415 19 + 2203405 CCAAGCTCCGCTCCCCGCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629978 19 - 14941987 CCAAGCTCCGCTCCCCGCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544652 19 + 83067054 CCATCCTCCGCTCCCCACT i micMur3.chr19 C 0 I 14 s proCoq1.NW_012148742v1 1284789 19 - 1406956 CCATCCTCCGCTCCCCACT i proCoq1.NW_012148742v1 C 0 I 7 s otoGar3.GL873546 11256296 19 - 20685099 CCGTCCTCCGCTCCCCCAT i otoGar3.GL873546 C 0 I 7 s mm10.chr1 111864315 19 + 195471971 TTCTGCTCCAGTCCCCACT i mm10.chr1 C 0 I 7 s dasNov3.JH575754 509553 19 - 2150887 CCATCCTCCGCTCCCCGCT i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112334959 868 - 122678785 M a score=19000.000000 s hg38.chr18_GL383571v1_alt 162031 1 + 198278 C s panTro5.chr18 65071916 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190954 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410462 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450961 1 - 152096393 C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400612 1 + 70235451 C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092022 1 - 75711847 C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651230 1 - 18804593 C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263102 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091397 1 - 72318688 C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428485 1 - 1517660 C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524587 1 + 6513552 C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294630 1 + 117903854 C i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482111 1 - 31320352 C i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677434 1 + 2203405 C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629997 1 - 14941987 C i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1284815 1 - 1406956 C i proCoq1.NW_012148742v1 I 7 C 0 s otoGar3.GL873546 11256322 1 - 20685099 C i otoGar3.GL873546 I 7 C 0 s mm10.chr1 111864341 1 + 195471971 C i mm10.chr1 I 7 C 0 s dasNov3.JH575754 509572 1 - 2150887 C i dasNov3.JH575754 C 0 I 1424 e micMur3.chr19 41544671 14 + 83067054 I e canFam3.chr1 112334959 868 - 122678785 M a score=26538.000000 s hg38.chr18_GL383571v1_alt 162032 10 + 198278 TGGGGCTGAG-- s panTro5.chr18 65071917 10 + 78221452 TGGGGCTGAG-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190955 10 + 77229886 TGGGGCTGAG-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410463 10 + 17472758 TGGGGCTGAG-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450962 6 - 152096393 TGGGGC------ i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400613 6 + 70235451 TGGGGC------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092023 6 - 75711847 TGGGGC------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651231 6 - 18804593 TGGGGC------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263103 6 + 18905526 TGGGGC------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091398 6 - 72318688 TGGGGC------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428486 6 - 1517660 TGGGGC------ i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524588 6 + 6513552 TGGGGC------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294631 6 + 117903854 TGACGC------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482112 6 - 31320352 CGACGC------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677435 6 + 2203405 TGACGC------ i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3629998 6 - 14941987 TGACGC------ i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1284816 6 - 1406956 TACGGC------ i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11256323 6 - 20685099 TACGGC------ i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864342 8 + 195471971 TGTGGC----TG i mm10.chr1 C 0 C 0 e micMur3.chr19 41544671 14 + 83067054 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M a score=1759863.000000 s hg38.chr18_GL383571v1_alt 162042 130 + 198278 TGAGGCAGGATGGCGAGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCC------------------GACGGGGGCTCGGCGCCGCACTGGGCCCCAAGGGAGACGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC s panTro5.chr18 65071927 130 + 78221452 TGAGGCAGGATGGCGAGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCC------------------GACGGGGGCTCGGCGCCGCACTGGGCCCCAAGGGAGACGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64190965 130 + 77229886 TGAGGCAGGATGGCGAGAGACCCGTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCC------------------GACGGGGGCTCGGCGCCGCACTGGGCCCCAAGGGAGACGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410473 130 + 17472758 TGAGGCAGGATGGCGAGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCC------------------GACGGGGGCTCGGCGCCGCACTGGGCCCCAAGGGAGACGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139450968 130 - 152096393 TGAGGCAGGAGGGCGAGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCC------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAAGGGAGGCGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGTTCTGCAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400619 130 + 70235451 TGAGGCAGGAGGGCCTGAGACCCCTGAACCACCAAGTCCGCTTACCTCAGGCAGATCCG------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAAGGGAGGCGGAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092029 130 - 75711847 TGAGGCAGGAGGGCCTGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCG------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAAGGGAGGCGGAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651237 130 - 18804593 TGAGGCAGGAGGGCCTGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCG------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAAGGGAGGCGGAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263109 130 + 18905526 TGAGGCAGGAGGTCCAGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCG------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAGGGGAGGCGGAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091404 130 - 72318688 TGAGGCAGGAGGGCTAGAGACCCCTGAGCCACCAAATTCGCTTACCTCAGGCAGATCCC------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAAGGGAGGCGCAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428492 130 - 1517660 TGAGGCAGGAGGGTCAGAGACCCCTGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCG------------------GACGGGGGCTCAGCGCCGCACTGGGCCCCAGGGGAGGCGGAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524594 130 + 6513552 TGAGGCAGGAGGGCTAGAGACCCCAGAGCCACCAAGTCCGCTTACCTCAGGCAGATCCG------------------GACAGGGGCTCAGCGCCGCACTGGGCCCCAAGGGAGGCGGAGGCGGAGAGTTCCAGAA-----------------------------------AACTGCCCTGCAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294637 130 + 117903854 TGCGGTAGGAGGGTGAGAGACCCCCGAGCCGCCAAGTCCGCTTACCTCAGGCAGATCCC------------------CACGGGGGCTCGGCGCCGCACTGGGCCCCGAGGGAGGCGGAGGTGGAGAGTTACAGAA-----------------------------------AACTGCTCTGCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482118 130 - 31320352 TGAGGCCGGAGGGCGAGAGACCCCCGAGCCGCCGAGGGCGCTTACCTCAGGCGGATccc------------------cgcgggggctcggcgccgcgccgggccccgAGGGAGGCGGAGGTGCCGAGTTCCGGAA-----------------------------------AACTGCTCCGCAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677441 148 + 2203405 TGAGGTAGGAGGGTGAGAGACCCCTGAGCTGCCAAGTCCGCTTACCTCAGGCGGATCCCCACGGGGGCTCGGCGCCGCACGGGGGCTCGGCGCCGCACTGGGCCCCGAGGGAGGCGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630004 130 - 14941987 TGAGGTAGGAGGCTGAGAGACCCCTGAGCCGCCAAGTCCGCTTACCTCAGGCAGATCCC------------------CACGGGGGCTCGGCGCCGTACTGGGCCCCGAGGGAGGCGGAGGTGGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544685 130 + 83067054 CGTGGTTTGGGGGCGAGAGACCCCTAAATGGCCAAGTCCGCTTACCTGAGGCAGATCCC------------------GACGGGGTCTCCGGGCTGCGCTGGGCCCCAAGAGAGGCGGATGTGGAGAGTTCGAGAA-----------------------------------AACTGCTCTGCAC i micMur3.chr19 I 14 I 1 s proCoq1.NW_012148742v1 1284822 130 - 1406956 CGTGGTTTGGGGGCGAGAGACCCCTAAATGGCCAAGTCCGCTTACCTGAGGCAGATCCC------------------GACAGGGTCTCCGGGCTGCGCTGGGCCCCAAAAGAGGCGGAGGTGGAGAGTTCGAGAA-----------------------------------AACTGCTCTGCAC i proCoq1.NW_012148742v1 C 0 I 84 s otoGar3.GL873546 11256329 129 - 20685099 CATGGTTACAGGTTGAAACCCCTCTGTACGTCCAAGTCTGCTTACCTGAGCCTGTTCCC------------------GACGGGGTCTTCGGGCTACGACGGGCCCCAGGAGAGGCTGGGG-GGAGAGTTCCAGAA-----------------------------------AACTGCTCTGCAC i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111864350 165 + 195471971 CAACGTGGGGACTAGAGAGACCTCTAAATGGCCAAGTCGGCTTACCTCAGGCCGCCTGC------------------AACAGGATCTTCAAGCGGAGCTGGGCCCCAACACAGGCGAAGGCTGCCAGTTCAAGCAATTGAGGATTTTTTGGAGGCGGGCCTACGGAAGCCAAGAGCTCCGCAC i mm10.chr1 C 0 C 0 e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M a score=9120.000000 s hg38.chr18_GL383571v1_alt 162172 2 + 198278 GG- s panTro5.chr18 65072057 2 + 78221452 GG- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191095 2 + 77229886 GG- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410603 2 + 17472758 GG- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451098 2 - 152096393 GG- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400749 2 + 70235451 GG- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092159 2 - 75711847 GG- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651367 2 - 18804593 GG- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263239 2 + 18905526 GG- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091534 2 - 72318688 GG- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428622 2 - 1517660 GG- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524724 2 + 6513552 GG- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294767 2 + 117903854 CG- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482248 2 - 31320352 CG- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677589 2 + 2203405 CG- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630134 2 - 14941987 CG- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544816 1 + 83067054 -G- i micMur3.chr19 I 1 I 81 s otoGar3.GL873546 11256459 1 - 20685099 -G- i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111864515 2 + 195471971 -GC i mm10.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1284952 84 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M a score=17761.000000 s hg38.chr18_GL383571v1_alt 162174 13 + 198278 ----------------------------------CGGGC-----------CAGGCTCC s panTro5.chr18 65072059 13 + 78221452 ----------------------------------CGGGC-----------CAGGCTCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191097 13 + 77229886 ----------------------------------CGGGC-----------CAGGCTCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410605 13 + 17472758 ----------------------------------CGGGC-----------CAGGCTCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451100 13 - 152096393 ----------------------------------AGGGC-----------CGGGCTCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400751 13 + 70235451 ----------------------------------AGGGC-----------CAGGCTCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092161 13 - 75711847 ----------------------------------AGGGC-----------CAGGCTCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651369 13 - 18804593 ----------------------------------AGGGC-----------CAGGCTCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263241 13 + 18905526 ----------------------------------AGGGC-----------CAGGCTCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091536 13 - 72318688 ----------------------------------AGGGC-----------CAGGCTCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428624 13 - 1517660 ----------------------------------AGGGC-----------CAGGCTCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3524726 13 + 6513552 ----------------------------------AGGGC-----------CAGGTTCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294769 5 + 117903854 ----------------------------------AGAGT------------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482250 5 - 31320352 ----------------------------------AGACT------------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677591 16 + 2203405 ----------------------------------AGAGTCACGGGGCTCC-------- i cebCap1.NW_016107689v1 C 0 I 54 s aotNan1.NW_018502140v1 3630136 5 - 14941987 ----------------------------------AGAGT------------------- i aotNan1.NW_018502140v1 C 0 I 2 s otoGar3.GL873546 11256460 12 - 20685099 -----------------------------------AAAC-----------CAGGCCCC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864517 45 + 195471971 CTCCGCCCGTGTGCTGCCAGGGACTGCACAGGCAGCGGC-----------CGGGCT-- i mm10.chr1 C 0 C 0 e micMur3.chr19 41544817 81 + 83067054 I e proCoq1.NW_012148742v1 1284952 84 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M a score=354149.000000 s hg38.chr18_GL383571v1_alt 162187 52 + 198278 CGCG-GGG-CTCCGCAAG---------ACCCCCGCGTCGTCTCCC--GCGCTACGGC-------AGGCGCTG------------- s panTro5.chr18 65072072 52 + 78221452 CGCG-GGG-CTCCGCAAG---------ACCCCCGCGTCGTCTCCC--GCGCTACGGC-------AGGCGCTG------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191110 52 + 77229886 CGCG-GGG-CTCCGCAAG---------ACCCCCGCGTCGTCTCCC--GCGCTACGGC-------AGGCACTG------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410618 52 + 17472758 CGCG-GGG-CTCCGCAAG---------ACCCCCGCGTCGTCCCCC--GCGCTACGGC-------AGGCGCTG------------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451113 53 - 152096393 CGCG-GGGCCTCCGCAAG---------ACCCCCGCGTCGTTCCCC--GCGCTCCGGC-------AGGCGCTG------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400764 52 + 70235451 CGCG-GGG-CTCCGCGAG---------ACCCCCGCGCCGTCCCCC--GGGCTCCGAC-------AGGCGCTG------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092174 52 - 75711847 CGCG-GGG-CTCCGCGAG---------ACCCCCGCGCCGTCCTCC--GGGCTCCGAC-------AGGCGCTG------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651382 52 - 18804593 CGCG-GGG-CTCCGCGAG---------ACCCCCGCGCCGTCCTCC--GGGCTCCGAC-------AGGCGCTG------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263254 52 + 18905526 CGCG-GGG-CTCCGCGAG---------ACCTCCGCGCCGTCCCCC--GCGCTCCGAC-------AGGCGCTG------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091549 52 - 72318688 CGCG-GGG-CTCCGCGAG---------ACCCCCGCGCCCTCCCCC--GCGCTCCGAC-------AGGCGCTG------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 428637 52 - 1517660 CGCG-GGG-CTCCGCGAG---------ACCTCCGCGCCGTCCCCC--GCGCTCCGAC-------AGGCGCTG------------- i manLeu1.NW_012106698v1 C 0 M 405 s colAng1.NW_012115433v1 3524739 52 + 6513552 CGCG-GGG-CTCCGCGAG---------ACCCCCGCGCCGTCCCCC--GCGCTCCGAC-------AAGCGCTG------------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294774 38 + 117903854 CACG-GGG-CTCCG---------------------GGCGCCTCCA--GCGCTCTGGC-------AGGCG--C------------- i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19482255 40 - 31320352 cgcg-ggg-ctccg---------------------ggcgcccccg--gcgctctggc-------gggcggcg------------- i saiBol1.JH378121 C 0 I 1 s aotNan1.NW_018502140v1 3630143 38 - 14941987 --CG-GGG-CTCCG---------------------GGCGCCCCCA--GCGCTCTGGC-------AGGCGGCG------------- i aotNan1.NW_018502140v1 I 2 I 1 s otoGar3.GL873546 11256472 60 - 20685099 --CGAGGG-CCCCGCAGGGATCCCCGCACCCTGGCGGCGTCCTCC--GCGCCCCAAC-------AGGCGCTA------------- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864562 69 + 195471971 ---G-GGT-CTCCTCA-----------GCTCGGGCGTCGTCTCCTCAGCGCCCCGACTCTTGGGGGGTGGCGGGGTGGGGGGCTT i mm10.chr1 C 0 C 0 e micMur3.chr19 41544817 81 + 83067054 I e proCoq1.NW_012148742v1 1284952 84 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e cebCap1.NW_016107689v1 1677607 54 + 2203405 I a score=32790.000000 s hg38.chr18_GL383571v1_alt 162239 3 + 198278 CCC s panTro5.chr18 65072124 3 + 78221452 CCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191162 3 + 77229886 CCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410670 3 + 17472758 CCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451166 3 - 152096393 CCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400816 3 + 70235451 CCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092226 3 - 75711847 CCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651434 3 - 18804593 CCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263306 3 + 18905526 CCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091601 3 - 72318688 CCC i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3524791 3 + 6513552 CCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294813 3 + 117903854 CCC i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19482296 3 - 31320352 ccc i saiBol1.JH378121 I 1 C 0 s aotNan1.NW_018502140v1 3630182 3 - 14941987 CCC i aotNan1.NW_018502140v1 I 1 C 0 s otoGar3.GL873546 11256532 3 - 20685099 CAC i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111864631 3 + 195471971 CCC i mm10.chr1 C 0 C 0 e micMur3.chr19 41544817 81 + 83067054 I e proCoq1.NW_012148742v1 1284952 84 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e cebCap1.NW_016107689v1 1677607 54 + 2203405 I e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=8159.000000 s hg38.chr18_GL383571v1_alt 162242 2 + 198278 CA s panTro5.chr18 65072127 2 + 78221452 CA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191165 2 + 77229886 CA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410673 2 + 17472758 CA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451169 2 - 152096393 CA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400819 2 + 70235451 CA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092229 2 - 75711847 CA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651437 2 - 18804593 CA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263309 2 + 18905526 CA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091604 2 - 72318688 CA i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3524794 2 + 6513552 CA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294816 2 + 117903854 CA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482299 2 - 31320352 cA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3630185 2 - 14941987 CA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544898 1 + 83067054 C- i micMur3.chr19 I 81 C 0 s otoGar3.GL873546 11256536 1 - 20685099 C- i otoGar3.GL873546 I 1 I 8 s mm10.chr1 111864634 2 + 195471971 TA i mm10.chr1 C 0 I 4 e proCoq1.NW_012148742v1 1284952 84 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e cebCap1.NW_016107689v1 1677607 54 + 2203405 I e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=779072.000000 s hg38.chr18_GL383571v1_alt 162244 68 + 198278 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GACCCGCACGGCC--------------------CGGACACGCCCG-CCCTCAGGAAA s panTro5.chr18 65072129 68 + 78221452 GCTCGGTCTCCTCAGT--CGCGCTCGGTCCCCGC-------------------GACCCGCACGGCC--------------------CGGACACGCCCG-CCCTCAGGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191167 68 + 77229886 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GACCCGCACGGCC--------------------CGGACACGCCCG-CCCTCAGGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410675 68 + 17472758 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GCCCCGCACGGCC--------------------CGGAGACGCCCG-CCCTCAGGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451171 68 - 152096393 GCTCGGTCTCCTCAGC--CGCCCTCGGTCCCCGC-------------------GCCCCGCACGGCC--------------------CGGGCACGCCCG-CCCTCAGGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400821 68 + 70235451 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GCCCCGCACCGCC--------------------CGGACACTCCCG-CCCTCAGGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092231 68 - 75711847 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GCCCCGCACCGCC--------------------CGGACACTCCCG-CCCTCAGGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651439 68 - 18804593 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GCCCCGCACCGCC--------------------CGGACACTCCCG-CCCTCAGGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263311 68 + 18905526 GCTCGGTCTCCTCAGC--CGCGCTCAGTCCCCGC-------------------GCCCCGCACCGCC--------------------CGGACACGCCCG-CCCTCAGGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091606 68 - 72318688 GCTCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GCCCCGCACCGCC--------------------CGGACACGCCCG-CCCTCAGGAAA i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3524796 68 + 6513552 GCTCGGTCTCCTCAGC--TGCGCTCGGTCCCCGC-------------------GCCCCACACCGCT--------------------CGGACACGCCCG-CCCTCAGGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105294818 68 + 117903854 GCTCGGTCTCCTCAG---CGCGCTCGGTCCTCGC-------------------GCCCCGCAGCGCC--------------------CGGACACGCTCGCCCCTCAGGAAA i calJac3.chr13 C 0 M 352 s saiBol1.JH378121 19482301 68 - 31320352 GCCCGGTCTCCTCAGC--CGCGCTCGGTCCCCGC-------------------GCCCCGCACCGCC--------------------AGGACACGCCCG-CCCTCAGGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677661 68 + 2203405 GCTCGGTCTCCTCAGC--CCCGCTCGGTCCCCGC-------------------GTCCCCCACCGCC--------------------CGGACACGCCCG-CCCACAGGAAA i cebCap1.NW_016107689v1 I 54 C 0 s aotNan1.NW_018502140v1 3630187 68 - 14941987 GCTCGGTCTCCTCAGC--CGCGCTCGGTTCccgc-------------------gccccgcaccgcc--------------------cggacacgcccg-cccTCAGGAAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544899 64 + 83067054 GCTCCGTCTCCTCAGC--CGCGCGGA---CCCGC-------------------GCCCCGCACCGCC--------------------CAGACACACCCG-CCCCCAGGAA- i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285036 66 - 1406956 GCTCGGTCTCCTCAGCCGCGCGCGGA---CCCTC-------------------GCCCCGCACCGCC--------------------CGGACACACCCG-CCCCCAGGAA- i proCoq1.NW_012148742v1 I 84 C 0 s otoGar3.GL873546 11256545 61 - 20685099 GCTCGGT---CTCAGC--CGCGCCAG---GACGC-------------------GTGCCGCACCGCC--------------------CGGACACACCCG-CCCCCTACAA- i otoGar3.GL873546 I 8 C 0 s mm10.chr1 111864640 105 + 195471971 GCGTGCTTTCCTCAGC--GCCAC--AGTCTCCGCTGCTCCTCTGGGTGCGGAGTCTCCTCAGGGCCGGATCTCGGGGATGGAGACTCAGACACACCCG-CCCTGGAGGAA i mm10.chr1 I 4 C 0 e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=560391.000000 s hg38.chr18_GL383571v1_alt 162312 58 + 198278 CGCCGGACGCTTGTGGG-GGCAACCACGGACCGCAGGACAGAGACCCGCGGGCGGCGGG s panTro5.chr18 65072197 58 + 78221452 CGCCGGACGCTTGTGGG-GGCAACCACGGACCGCAGGACAGAGACCCGCGGGCGGCGGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191235 58 + 77229886 CGCCGGACGCTTGTGGG-GGCAACCACGGACCGCAGGACAGAGACCCGCGGGCGGCGGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410743 58 + 17472758 CGCCGGACGCTTGTGGG-GGCAACCACGGACCGCAGGACAGAGACCCGCGGGCGGCGGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451239 58 - 152096393 CGCCGGACGCTCGTGGG-GGCAACCGCGGACCGCAGGACAGAGACCCGCGGGCGGCGGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400889 58 + 70235451 CGCTGGACGCTCGTGGG-GGCAACCCCGGATTGCAGGACAGAGACCAGCGGGCGGCGGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092299 58 - 75711847 CGCTGGACGCTCGTGGG-GGCAACCCCGGATTGCAGGACAGAGACCAGCGGGCAGCGGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651507 58 - 18804593 CGCTGGACGCTCGTGGG-GGCAACCCCGGATTGCAGGACAGAGACCAGCGGGCGGCGGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263379 58 + 18905526 CGCTGGACGCTCGTGGG-GGCAACCCCGGATTGCAGGACAGAGCCCAGCGGCCGGCGGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091674 58 - 72318688 CGCTGGACGCTCGTGGG-GGCAACCCCGGATTGCAGGACAGAGACCAGCGGGCGGCGGG i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3524864 58 + 6513552 CGCTGGACGCTCGTGGG-GGCAACCCCGGATTGCAGGACTGAGACCAGCGGGCGGCGGG i colAng1.NW_012115433v1 C 0 M 220 s saiBol1.JH378121 19482369 59 - 31320352 CGTCGGGCGCTCGGGGGAGGCGACCCCTGGCCCCGGGACGGAGAGCCGCGGGCGGGGGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1677729 58 + 2203405 CCTCGGGCGCTCGCGGG-GGCAACCCCTGACTCCAGGGCAGAGACACGCGGGCGGGAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630255 57 - 14941987 CGTCGAGCGCTTGCAGG-GGCAACCCCTGACCCCGGGACAGAGACCCGCGGGCGGG-GG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41544963 58 + 83067054 CGCCGGACGCTCGCGGG-GGCACTCCCGGACCGCCGGAGGCAGACCCGCGGGCAGCGGG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285102 58 - 1406956 GGCCGGACGCTCGCGGG-GGCAGCCCCGGACCGTACGAGGCAGACTCGCGGGCAGCGGC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11256606 58 - 20685099 CGCCAGATGTTTGTGGG-GGCAACCACCGACTGCGGGAAGCAGATCCGCAGGCAGCGGG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864745 56 + 195471971 CGCCAGGCGCTGGCCGG-CGCGGCTCTC--TTGGCGGGAGGCCACCCGCGGGCGGCGGG i mm10.chr1 C 0 C 0 e calJac3.chr13 105294886 352 + 117903854 M e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=250083.000000 s hg38.chr18_GL383571v1_alt 162370 29 + 198278 TTCTCTCGGTGGCGCCGTATCCAGAGCAG s panTro5.chr18 65072255 29 + 78221452 TTCTCTCGGTGGCGCCGTATCCAGAGCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191293 29 + 77229886 TTCTCTCGGTGGCGCCGTATCCAGAGCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410801 29 + 17472758 TTCTCTCGGTGGCGCCGTATCCAGAGCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451297 29 - 152096393 TTCTCTCGGTGGCGCCGTATCCAGAGCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400947 29 + 70235451 CGCTCTCGGTGGCGCCGTATCCAGCGCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092357 29 - 75711847 CGCTCTCGGTGGCGCCGTATCCAGCGCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651565 29 - 18804593 CGCTCTCGGTGGCGCCGTATCCAGCGCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263437 29 + 18905526 CGCTCTCGGTGGCGCCGTATCCAGCGCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091732 29 - 72318688 CGCTTTCGGTGGCGCCGTATCCAGCGCAG i chlSab2.chr18 C 0 C 0 s saiBol1.JH378121 19482428 29 - 31320352 CGGTCTCAGTGGCGCCTCGTCCAGCGCGG i saiBol1.JH378121 C 0 M 297 s cebCap1.NW_016107689v1 1677787 29 + 2203405 CGGTCTCAGTGGCGCCTCGTCCAGCGCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630312 29 - 14941987 CGGTCTCAGTGGCGCCTCGTCCAGCGCAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545021 29 + 83067054 CGCTCTCGGGGCCGCCGTGTCCAGCGGAG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285160 29 - 1406956 CGCTCTCGGGGCCGCCGAGTCCAGCGGAG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11256664 29 - 20685099 CGCTCTCCGGGCCGCCGTGTCCAGCGGAG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864801 28 + 195471971 TGATCTCCA-GGCGCTGTCTTCAGCGCAG i mm10.chr1 C 0 C 0 e calJac3.chr13 105294886 352 + 117903854 M e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e colAng1.NW_012115433v1 3524922 220 + 6513552 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=317005.000000 s hg38.chr18_GL383571v1_alt 162399 40 + 198278 CGCCCGCGTGCCCAGGCGGTGATGTCGCCGCGGCCGAGGA s panTro5.chr18 65072284 40 + 78221452 CGCCCGCGTCCCCAGGCGGTGATGTCGCCGCGACCGAGGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191322 40 + 77229886 CGCCCGCGTCCCCAGGCGGTGATGTCGCCGCGACCGAGGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410830 40 + 17472758 CGCCCGCGTCCCCAGGCGGTGATGTCGCCGCGGCCGAGGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451326 40 - 152096393 CGCCCGCGTCCCCAGGCGGTGATGTCGCCGCGGCCGAGGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57400976 40 + 70235451 CGCCCGCGTCCCCAGGCGGTGGTGTCGCCGCGGCAGCCGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092386 40 - 75711847 CGCCCGCGTCCCCAGGCGGTGGTGTCGCCGCGGCAGCCGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651594 40 - 18804593 CGCCCGCGTCCCCAGGCGGTGGTGTCGCCGCGGCAGCCGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263466 40 + 18905526 CGCCCGCGTCCCCAGGCGGTGGTATCGCCGCGGCCGCTGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091761 40 - 72318688 CGCCCGCGTCCCCAGGCGGTGGTGTCGCCGCGGCCGCCGA i chlSab2.chr18 C 0 C 0 s cebCap1.NW_016107689v1 1677816 40 + 2203405 CGCCCGCGTCCCCAGGAGGTGTTGTCGCCGCGGCAGCCGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630341 40 - 14941987 CGCCCGCGTCCTCAGGAGGTGTTGTCGCCTCGGCAGCCGC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545050 40 + 83067054 CGCCCGCGTCCCCAGGCCGCGATGGAGCCGCAGCCGCCGC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285189 40 - 1406956 CGCTCGCGTCCCCAGGCCGCGATGCCGCCGCAGCCGCCGC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11256693 40 - 20685099 TCCCCGCGTCCCCAGGCCGCGATGCCGCCGCAGCCGCCGC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864829 39 + 195471971 CGACGGTGACCTAAGGCC-TGATGCTGCCTAGACCGGCGC i mm10.chr1 C 0 C 0 e calJac3.chr13 105294886 352 + 117903854 M e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e saiBol1.JH378121 19482457 297 - 31320352 M e colAng1.NW_012115433v1 3524922 220 + 6513552 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=577280.000000 s hg38.chr18_GL383571v1_alt 162439 61 + 198278 TCCTCTGTGCCAGCTCCGGCCGCGCAGCCcggggagggt---gagacggcgacgcgggccggca s panTro5.chr18 65072324 63 + 78221452 TCCTCTGTGCCAGCTCCGGCCGCGCAGCCCGGGGAGGGT-GAGAGACggcgacgcgggccggca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191362 63 + 77229886 TCCTCTGTGCCAGCTCCGGCCGCGCAGCCCGGGGAGGGT-GAGAGACggcgacgcgggccggca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410870 63 + 17472758 TCCTCTGTGCCAGCTCGGGCCGCGCAGCCCGGGGAGGGT-GAGAGACGGCGACGCGGGCCGGCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451366 63 - 152096393 TCCTCTGTGCCAGCTCCGGCCGCGCAGCCCGGGGAGGGT-GAGAGACGGCGACGCGGGCCGGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401016 63 + 70235451 TGCTCTGTGCCAGCTCCGGCCGCGCGGCCCGGGGAGGGC-GAGAGACAGCGACGCGGGCCGGCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092426 63 - 75711847 TGCTCTGTGCCAGCTCCGGCCGCGCGGCCCGGGGAGGGC-GAGAGACGGCGACGCGGGCCGGCA i macFas5.chr18 C 0 M 100 s macNem1.NW_012016688v1 13651634 63 - 18804593 TGCACTGTGCCAGCTCCGGCCGCGCGGCCCGGGGAGGGC-GAGAGACGGCGACGCGGGCCGGCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263506 63 + 18905526 TGCTCTGTGCCAGCTCCggccgcgcggcccggggagggc-gagagacggcgacgcgggccggca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091801 63 - 72318688 TGCTCTGTGCCAGCTCCGGCCGCGCGGCCCGGGGAGGGC-GAGAGACGGCGACGCGGGCCGGCA i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105295241 63 + 117903854 TCTACTGTGCCAGCTCCAGCAGCGCGGCCCGGGTAGGGT-GAGAGGCGGCTTTCCGGGCCGGCA i calJac3.chr13 M 352 C 0 s cebCap1.NW_016107689v1 1677856 63 + 2203405 TCTGCTGTGCCAGCTCCAGCAGCGCGGCCCGGGTAGGGT-GAGAGGCGGCTTTCCGGGCAGGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630381 63 - 14941987 TCTACTGTGCCAGCTCCAGCAGCGCGGCCCGGGTAGGGT-GAGAGGCGGCTTTCCGGGCCGGCA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545090 57 + 83067054 TCCTCTGTGCCAGCTC------TGCGGCCCGGGGAGGGC-GAGAGACCGCGACGCGGGCCGGCG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285229 57 - 1406956 TCCTCTGTGCCAGCTC------CGCGGCCCGGGGAGGGC-GAGAGACCGCGACGCGGGCCGGCG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11256733 57 - 20685099 TCCTCTGTGCCAGCTC------CGCGGCCTGGGGAGGGC-GAGAAACCGCGACGCGGACCGGCg i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111864868 61 + 195471971 TCCGCCGAGCTAGCTGGAGCCGCCTAGCCCACGGAGGGCGGAAAAAAGGCGACACGTACTG--- i mm10.chr1 C 0 C 0 e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e saiBol1.JH378121 19482457 297 - 31320352 M e colAng1.NW_012115433v1 3524922 220 + 6513552 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=72417.000000 s hg38.chr18_GL383571v1_alt 162500 8 + 198278 agcggggg s panTro5.chr18 65072387 8 + 78221452 agcggggg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191425 8 + 77229886 agcggggg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410933 8 + 17472758 AGCGGGGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451429 8 - 152096393 AGCGGAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401079 8 + 70235451 GGCGGGGG i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651697 8 - 18804593 GGCGGGGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263569 8 + 18905526 ggcggggg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091864 8 - 72318688 GGCAGGGG i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105295304 8 + 117903854 GGCGgggg i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1677919 8 + 2203405 GGCGGGGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630444 8 - 14941987 GGCGGGGG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545147 8 + 83067054 GGCGGGGG i micMur3.chr19 C 0 I 327 s proCoq1.NW_012148742v1 1285286 8 - 1406956 GGCGGGGG i proCoq1.NW_012148742v1 C 0 I 201 s otoGar3.GL873546 11256790 8 - 20685099 ggccggag i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111864929 5 + 195471971 ---GAGGG i mm10.chr1 C 0 C 0 e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e saiBol1.JH378121 19482457 297 - 31320352 M e colAng1.NW_012115433v1 3524922 220 + 6513552 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M e macFas5.chr18 63092489 100 - 75711847 M a score=624792.000000 s hg38.chr18_GL383571v1_alt 162508 124 + 198278 cggggcggaggcaggac----ggggcggggttgaaggcggggctgaaggcggggcctcagggaaggcgagagacagcgacgctggctggcgggcgtggggcgggacggagacaggacagggc-ggggtc s panTro5.chr18 65072395 124 + 78221452 cggggcggaggcaggac----ggggcggggttgaaggaggggctgaaggcggggcctcagggaaggcgagagacagcgacgctggctggcgggcgtggggcgggacggagacaggacagggc-ggggtc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191433 124 + 77229886 cggggcggaggcaggac----ggggcggggttgaaggaggggctgaaggcggggcctcagggaaggcgagagacagcgacgctggctggcgggcgtggggcgggacggagacaggacagggc-ggggtc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5410941 113 + 17472758 CGGGGCGGAGGCAGGAC----GGGGCGGGGT------------TGAAGGCGGGGCCTCAGGGAAGGCGAGAGACAGCGACGCTGGCTGGCGGGCGTGGGGCGGGACGGAGACTGGACAGGGAGGGGGTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451437 112 - 152096393 CGGGGCGGAGACAGGAC----GGGGCGGGGT------------TGAAGGCGGGGCCTCAGGGAAGGCGAGAGACAGCAACGCTGGCTGGCGGACGGGGGGCGGGACGGAGACAGGACGGGGC-GGGGTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401087 112 + 70235451 CGGGGCGGAGACAGGAC----GGGGCGGGGC------------TGAAGGCGGGGCCTCAGGGAAGGCGAGAGACACAGACgcgggctggcgggcggggggcgggacggAGACAAGACGGGGC-GGGGTC i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651705 112 - 18804593 CGGGGCGGAGACAGGAC----GGGGCGGGGC------------TGAAGGCGGGGCCTCAGGGAAGGCGAGAGACAGAGACGCGGGCTGGCGGGCGGGGGGCGGGACGGAGACAAGACGGGGC-GGGGTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263577 112 + 18905526 cggggcggagacaggac----ggggcggggc------------tgaaggcggggcctcagggaaggcgagagacagagacgcgggctggcgggcggggggcgggacggagacaagacggggc-ggggtc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091872 112 - 72318688 CGGGGCGGAGACAGGAC----GGGGCGGGGC------------TGAAGGCGGGGCCTCAGGGAAGGCGAGAGACAGAGACGCGGGCTGGCGGGCGGGGGGCGGGACGGAGACAAGACGGGGC-GGGGTC i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105295312 103 + 117903854 cggggcggagataggac----ggggcgggac------------tggaggcggggtctcagggagg----------gcgacactggccggcgggcaaggggcgggacagagacagcactgtctgggggtc i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1677927 112 + 2203405 CGGGGCGGAGATAAGGC----GGGGCGGGAC------------TGGAGGCGGGGTCTCAGGGAGGGCGAGAGACAGCGACACTGGCGGGCGGGCGAGGGGCGGGACAGAGACCGCACGGGCT-GGGGTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630452 112 - 14941987 CGGGGCGGAGATAGGAC----GGGGCGGGGC------------TGGAGGCGGGGTCTCAGGGAGGGCGACAGACAGCGACACTGGCCGGCGGGCGAGGGGCGGGACAGAGACAGCACGGGCT-GGGGTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11256799 100 - 20685099 cggggcgggaacggtga----ggggcggggcttgggcggag--atgaggcggggcct-ggggagggagagagcctgagacgagggcaggcggccggggggc----------------------ggggac i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111864934 112 + 195471971 CGGGGCGGGGTCTGATCCAGGGAGGCGTGTC------------CAGAGGCGGGGTCTTAGG---AGCAAAACGCCCGCCTAgcggccggcgggcct-gggcggggcgccccgcAGAAAGGCT-GAGGCC i mm10.chr1 C 0 C 0 e micMur3.chr19 41545155 327 + 83067054 I e proCoq1.NW_012148742v1 1285294 201 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112334959 868 - 122678785 M e saiBol1.JH378121 19482457 297 - 31320352 M e colAng1.NW_012115433v1 3524922 220 + 6513552 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M e macFas5.chr18 63092489 100 - 75711847 M a score=36671.000000 s hg38.chr18_GL383571v1_alt 162632 5 + 198278 agagg s panTro5.chr18 65072519 5 + 78221452 agagg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191557 5 + 77229886 agagg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411054 5 + 17472758 AGAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451549 5 - 152096393 AGAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401199 5 + 70235451 AGAGG i rheMac8.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651817 5 - 18804593 AGAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263689 5 + 18905526 agagg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091984 5 - 72318688 AGAGG i chlSab2.chr18 C 0 C 0 s calJac3.chr13 105295415 5 + 117903854 ggagg i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1678039 5 + 2203405 GGAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630564 5 - 14941987 GGAGG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11256899 5 - 20685099 atggg i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865046 5 + 195471971 AGGGA i mm10.chr1 C 0 C 0 s canFam3.chr1 112335846 5 - 122678785 agaga i canFam3.chr1 M 868 C 0 e micMur3.chr19 41545155 327 + 83067054 I e proCoq1.NW_012148742v1 1285294 201 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e saiBol1.JH378121 19482457 297 - 31320352 M e colAng1.NW_012115433v1 3524922 220 + 6513552 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M e macFas5.chr18 63092489 100 - 75711847 M a score=273988.000000 s hg38.chr18_GL383571v1_alt 162637 46 + 198278 cggggcttcggggaggacgggaggagccgtgagcaggccggcggcg s panTro5.chr18 65072524 46 + 78221452 cggggcttcggggaggacgggaggagccgtgagcaggccggcggcg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191562 46 + 77229886 cggggcttcggggaggacgggaggagccgtgagcaggccggcggcg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411059 46 + 17472758 CGGGGCTTCGGGGAGGACGGGAGGAGCCGTGAGCAGGCCGGCGGCG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451554 46 - 152096393 CGGGGCTTCGGGGAGGACGGGAGGAGCCGTGAGCAAGCCGGCGGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401204 46 + 70235451 CGGGGCTTCAGGGAGGACGGGAGGAGCCGTGAGCAGggcggcggcg i rheMac8.chr18 C 0 I 29 s macNem1.NW_012016688v1 13651822 46 - 18804593 CGGGGCTTCAGGGAGGACGGGAGAAGCAGTGAGCAGGGCGGTGGCG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263694 46 + 18905526 cggggcttcagggaggacgggaggagccgtgagcaggccggcggcg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60091989 46 - 72318688 CGGGGCTTCAGGGAGGACGGGAGGAGCCGTGAGCAGGCGGGCGGCG i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3525143 44 + 6513552 CGGGGCTTCAGGGAGAACGGGAGGAGCCGTGAGCGAGCAGGCGG-- i colAng1.NW_012115433v1 M 220 C 0 s calJac3.chr13 105295420 46 + 117903854 cggggcctcgggaaggcccagaggaggcgtgggcaggccggcggcg i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1678044 46 + 2203405 CGGGGCCTCGGGAAGGCCCAGAGGAGGCGTGGGCCGGCGGGCGGCG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630569 46 - 14941987 CGGGGCCTCGGGAAGGCCCAGAGGAGGCTTGGGCAGGCCGGCGGCG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11256904 34 - 20685099 cggggccttgggagagaagag------cgcgagcgacccg------ i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865051 30 + 195471971 -AAGGCCT---------------GAGCCGCCCGCGCACTGCCAGTG i mm10.chr1 C 0 C 0 s canFam3.chr1 112335851 32 - 122678785 TGGGGATTCAGGCAGCCgggcagggggcgggg-------------- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41545155 327 + 83067054 I e proCoq1.NW_012148742v1 1285294 201 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e saiBol1.JH378121 19482457 297 - 31320352 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M e macFas5.chr18 63092489 100 - 75711847 M a score=14476.000000 s hg38.chr18_GL383571v1_alt 162683 3 + 198278 ggc- s panTro5.chr18 65072570 3 + 78221452 ggc- i panTro5.chr18 C 0 I 21 s panPan2.chr18 64191608 3 + 77229886 ggc- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411105 3 + 17472758 GGC- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451600 3 - 152096393 GGC- i nomLeu3.chr4 C 0 I 25 s rheMac8.chr18 57401279 3 + 70235451 ggc- i rheMac8.chr18 I 29 C 0 s macFas5.chr18 63092589 3 - 75711847 GGC- i macFas5.chr18 M 100 C 0 s macNem1.NW_012016688v1 13651868 3 - 18804593 GGC- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263740 3 + 18905526 ggc- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092035 3 - 72318688 GGC- i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3525187 2 + 6513552 -GC- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295466 3 + 117903854 ggc- i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1678090 1 + 2203405 G--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630615 3 - 14941987 GAC- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111865081 3 + 195471971 GGC- i mm10.chr1 C 0 C 0 s canFam3.chr1 112335883 3 - 122678785 -gcg i canFam3.chr1 C 0 C 0 e micMur3.chr19 41545155 327 + 83067054 I e proCoq1.NW_012148742v1 1285294 201 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e otoGar3.GL873546 11256938 0 - 20685099 C e saiBol1.JH378121 19482457 297 - 31320352 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=36840.000000 s hg38.chr18_GL383571v1_alt 162686 4 + 198278 gggg s panTro5.chr18 65072594 4 + 78221452 gggg i panTro5.chr18 I 21 C 0 s panPan2.chr18 64191611 4 + 77229886 gggg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411108 4 + 17472758 GGGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451628 4 - 152096393 gggg i nomLeu3.chr4 I 25 C 0 s rheMac8.chr18 57401282 4 + 70235451 gggg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092592 4 - 75711847 GGGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651871 4 - 18804593 GGGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263743 4 + 18905526 gggg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092038 4 - 72318688 GGGG i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3525189 3 + 6513552 GGG- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295469 4 + 117903854 gggg i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1678091 4 + 2203405 TGGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630618 4 - 14941987 GGGG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111865084 4 + 195471971 GGGG i mm10.chr1 C 0 C 0 s canFam3.chr1 112335886 4 - 122678785 gggg i canFam3.chr1 C 0 C 0 e micMur3.chr19 41545155 327 + 83067054 I e proCoq1.NW_012148742v1 1285294 201 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I e otoGar3.GL873546 11256938 0 - 20685099 C e saiBol1.JH378121 19482457 297 - 31320352 M e manLeu1.NW_012106698v1 428689 405 - 1517660 M a score=719542.000000 s hg38.chr18_GL383571v1_alt 162690 91 + 198278 cggggcCGAAAGCAGGTGAGGCGGGGC----------CAAGCGCCCCG-----GGTTTCTAAGCGGAG--GAAGCTCTAGGCGTTT-----GTGTTCTGGGC---TTGCAGCGGTG s panTro5.chr18 65072598 90 + 78221452 cggggcCGAAAGCAGGTGAGGCGGGGC----------CAAGCGCCCCG-----GGTTTCTAAGCGGA---GAAGCTCTGGGCGTTT-----GTGTTCTGGGC---TTGCAGCGGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191615 90 + 77229886 cggggcCGAAAGCAGGTGAGGCGGGGC----------CAAGCGCCCCG-----GGTTTCTAAGCGGA---GAAGCTCTGGGCGTTT-----GTGTTCTGGGC---TTGCAGCGGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411112 90 + 17472758 CGGGGCCGAAAGCAGGTGAGGC-GGGC----------CAAGCGCCCCG-----GGTTTCTAAGCGGAG--GAAGCTCTGGGTGTTT-----GGGTTCTGGGC---TTGCAGCGGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451632 91 - 152096393 cggggcCGACACCAGGTGAGGCGGGGC----------CAAGCGCCCAG-----GGTTTCTAAGCGGAG--GAAGCTCTGGGCGTTT-----GTGTTCTGGGA---TTGCAGCGGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401286 91 + 70235451 cggGGCCCACAGCAGGTGAGGCGGGGC----------CAAGCGCCGCG-----GGTTTCTAAGCGGAG--GAATCTCTGGGCGTTT-----GCGTTCTGGTC---TTGCAGCGGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092596 91 - 75711847 CGGGGCCCACAGCAGGTGAGGCGGGGC----------CAAGCGCCGCG-----GGTTTCTAAGCGGAG--GAATCTCTGGGCGTTT-----GCGTTCTGGTC---TTGCAGCGGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651875 91 - 18804593 CGGGGCCCACAGCAGGTGAGGCGGGGC----------CAAGCGCCGCG-----GGTTTCTAAGCGGAG--GAATCTCTGGGCGTTT-----GCGTTCTGGTC---TTGCAGCGGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263747 91 + 18905526 cggggcCCACAGCAGGTGAGGCGGGGC----------CAAGCGCCGCG-----GGTTTCTAAGCGGAG--GAAGCTCTGGGCGTTT-----GCGTTCTGGTC---TTGCAGCGGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092042 91 - 72318688 CGGGGCCCACAGCAGGTGAGGCGGGGC----------CAAGCGCCGCG-----GGTTTCTAAGCGGAG--GAAGCTCTGGGCGTTT-----GCGTTCTGGTC---TTGCAGCGGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429094 91 - 1517660 CGGGGCCCACAGCAGGTGAGGCGGGGC----------CAAGCGCCGCG-----GGTTTCTAAGCGGAG--GAAGCTCTGGGCGTTT-----GCGTTCTGGTC---TTGCAGCGGTG i manLeu1.NW_012106698v1 M 405 C 0 s colAng1.NW_012115433v1 3525192 91 + 6513552 CGGGGCCGACAGCAGGTGAGGCGGGGT----------CAAGCGCCGCA-----GATTTCTAAGCAGAG--GAAGCTCTGGGTGTTT-----GTGTTCTGGGC---TTGCAGCGGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295473 100 + 117903854 cggggccgacagcaggtggggcggagcagaggcggggCAAGCGCCCTG-----GGTTTCTAAGCAGAG--GAAGCTCGGGGTTTTC-----GCGTTCTGGGC----TGTAGCGAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482755 83 - 31320352 -----------------GGGGCGGAGCCGAGGCGGGGCCAGCGCCCTG-----GGTTTCTCAGCAGAG--GAAGCTCGGGGTTTCT-----GCGGTCTGCGC----TGCAGCGAAG i saiBol1.JH378121 M 297 C 0 s cebCap1.NW_016107689v1 1678095 99 + 2203405 CGGGGCCGACAGCAGGTGGGGCGGAGCCGAGGCGGGGCAAGCGCCCTG-----GGTTTCT-AGCAGAG--GAAGCTCTGGGTTTTT-----GCGTTCTGGGC----TGCGGCGAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630622 100 - 14941987 CGGGGCCGACAGAAGATGGGACGGAGCCGAGGCGGGGCAAGCGCCCTG-----GGTTTCTAAGCAGAA--GCAGCTCGGGGTTTTT-----GCGTTGTGGGC----TGCAGCGAAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11256938 71 - 20685099 -------------------ggcggggc----------cggCGCCCCCG-----GGATTCCGAAGGGAG--GAGG-TTGGGGCCCGA-----GAGTTCCCGGC---TGCCGGGGGCT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865088 40 + 195471971 ---------------------------------------------CCA-----GGCTTT-------------AACTCTATGCAGCA-----GTGTTTCAGTCAGCTTG-------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112335890 89 - 122678785 cggggcc----------ggggcggggC----------TGAACGTCCCATCCCTGGATCCTAAAGCGAGTTGAGTCGGTGGGTGTCTCCGGCGAGTTCCGGGC----TGCGGTG--- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41545155 327 + 83067054 I e proCoq1.NW_012148742v1 1285294 201 - 1406956 I e dasNov3.JH575754 509573 1424 - 2150887 I a score=854091.000000 s hg38.chr18_GL383571v1_alt 162781 73 + 198278 GCCGCGCGCTCCCGGAGGAGTCGAGCTGGAGGAGGGGACAGTTTGGGAGTGCGAGAGTCTAAAGACGCTGCCA s panTro5.chr18 65072688 73 + 78221452 GCCGCGCGCTCCCGGAGGAGTCGAGCTGGAGGAGGGGACAGTTTGGGAGTGCGAGAGTCTAAAGACGCTGCCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191705 73 + 77229886 GCCGCGCGCTCCCGGAGGAGTCGAGCTGGAGGAGGGGACAGTTTGGGAGTGCGAGAGTCTAAAGACGCTGCCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411202 73 + 17472758 ACCGCGCGCTCCCGGAGGAGTCGAGCTGGAGGAGGGGACAGTTTGGCAGTGCGAGAGCCTAAAGACGCTGCCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451723 73 - 152096393 GCCGCGCGCTCCCGGAGGAGTCGAGCTGGAGGAGGGGACAATTTGGGAGTGCGAGAGTCTAAAGACGCTGCCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401377 73 + 70235451 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACAGTTTAGGAGTGCGAGAGTCTAAAGACGCTGCCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092687 73 - 75711847 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACAGTTTAGGAGTGCGAGAGTCTAAAGACGCTGCCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13651966 73 - 18804593 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACAGTTTAGGAGTGCGAGAGTCTAAAGACGCTGCCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263838 73 + 18905526 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACCGTTTAGGAGTGCGAGAGTCTAAAGACGCTGCCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092133 73 - 72318688 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACAGTTTAGGAGTGCGAGAGTCTAAAGACGCTGCCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429185 73 - 1517660 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACCGTTTAGGAGTGCGAGAGTCTAAAGACGCTGCCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525283 73 + 6513552 GCCGCGCGCTCCCTGAGGAGTCGAACTGGAGGAGGGGACAGTTTAGGAGTGCGAGAGTCTAAAGACACTGCCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295573 73 + 117903854 GCCGCGCACTCCCGGAGGAGTTGAGCTGGAGGAGGGGACAGTTTGGGAATGCGAGTGTCTAAAGACACTGCCG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482838 73 - 31320352 GCCGCGCGCTCCCGGAGGAGTTGAGCTGGAGGAGGGGACAGTTTGGGAGTGCGAGTGTCTAGAGACGCTGCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678194 73 + 2203405 GCCGCGCGTTCCCGGAGGAGTTGAGCTGAAGGAGGGGACAGTTTGGGAGTGCGAGTGTCTAAAGACACTGCCG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630722 73 - 14941987 GCCGCGCGCCTCCGGAGGAGTTGAGCTGGAGGAGGGGACAGTTTGGGAGTGCGAGTGTCTAAAGACACCTCCG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1285495 68 - 1406956 GCCGCGCGCTCCCGGACCAGCGGAGCTGGAAGAGGGGA-AGTTTGGGAATGCGAG----TGGAGACCTCGCCC i proCoq1.NW_012148742v1 I 201 C 0 s otoGar3.GL873546 11257009 67 - 20685099 GCCGTGCG-TTCCGGACTAGCGGACCTGGAAGAGGGGA-AGTTTGGAAATGCGAG----CCCAGACCTCCCTC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865128 72 + 195471971 GCAAC-TGCTACTAAGACAACCCAGTTGGATTTCAGGGAAGTTTGGAAGTCCCTTTGTCTTTGCATCTGTCTA i mm10.chr1 C 0 C 0 s canFam3.chr1 112335979 57 - 122678785 ---------------GGGATCGGACCTCGAGGCGGGGA-AATGTAGAAGTGCAGTGGTCTGAAGACCTCGCCC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41545155 327 + 83067054 I e dasNov3.JH575754 509573 1424 - 2150887 I a score=97140.000000 s hg38.chr18_GL383571v1_alt 162854 7 + 198278 GGCTGGC s panTro5.chr18 65072761 7 + 78221452 GGCTGGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191778 7 + 77229886 GGCTGGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411275 7 + 17472758 GGCTGGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451796 7 - 152096393 GGCTGGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401450 7 + 70235451 GGTTGGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092760 7 - 75711847 GGTTGGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652039 7 - 18804593 GGTTGGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263911 7 + 18905526 GGTTGGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092206 7 - 72318688 GGTTGGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429258 7 - 1517660 GGTTGGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525356 7 + 6513552 GGATGGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295646 7 + 117903854 TGCTGGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482911 7 - 31320352 TGCTGGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678267 7 + 2203405 TGCTGGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630795 7 - 14941987 TGCTGGC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545482 7 + 83067054 GGCTGGT i micMur3.chr19 I 327 C 0 s proCoq1.NW_012148742v1 1285563 7 - 1406956 GGCTGGC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257076 7 - 20685099 GGCCAGC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865200 7 + 195471971 GGCTGGT i mm10.chr1 C 0 C 0 s canFam3.chr1 112336036 7 - 122678785 TACTGAC i canFam3.chr1 C 0 I 24 e dasNov3.JH575754 509573 1424 - 2150887 I a score=71297.000000 s hg38.chr18_GL383571v1_alt 162861 5 + 198278 ----GTTAA s panTro5.chr18 65072768 5 + 78221452 ----GTTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191785 5 + 77229886 ----GTTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411282 5 + 17472758 ----GTTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451803 5 - 152096393 ----GTTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401457 5 + 70235451 ----GTTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092767 5 - 75711847 ----GTTAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652046 5 - 18804593 ----ATTAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263918 5 + 18905526 ----GTTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092213 5 - 72318688 ----CTTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429265 5 - 1517660 ----GTTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525363 5 + 6513552 ----GTTAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295653 5 + 117903854 ----GTTAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482918 5 - 31320352 ----GTTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678274 5 + 2203405 ----GTTAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630802 5 - 14941987 ----GTTAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545489 5 + 83067054 ----GTTAA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285570 5 - 1406956 ----GTTAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257083 9 - 20685099 GTTAGTTAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865207 5 + 195471971 ----GTTCT i mm10.chr1 C 0 C 0 e dasNov3.JH575754 509573 1424 - 2150887 I e canFam3.chr1 112336043 24 - 122678785 I a score=38220.000000 s hg38.chr18_GL383571v1_alt 162866 2 + 198278 AA s panTro5.chr18 65072773 2 + 78221452 AA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191790 2 + 77229886 AA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411287 2 + 17472758 AA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451808 2 - 152096393 AA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401462 2 + 70235451 AA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092772 2 - 75711847 AA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652051 2 - 18804593 AA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263923 2 + 18905526 AA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092218 2 - 72318688 AA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429270 2 - 1517660 AA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525368 2 + 6513552 AA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295658 2 + 117903854 AA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482923 2 - 31320352 AA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678279 2 + 2203405 AA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630807 2 - 14941987 AA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545494 2 + 83067054 AA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1285575 2 - 1406956 AA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257092 2 - 20685099 AA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865212 2 + 195471971 AA i mm10.chr1 C 0 C 0 s dasNov3.JH575754 510997 2 - 2150887 AA i dasNov3.JH575754 I 1424 C 0 e canFam3.chr1 112336043 24 - 122678785 I a score=369096.000000 s hg38.chr18_GL383571v1_alt 162868 27 + 198278 CCTTTTGGTTAT--GGGAAGACGACAACT s panTro5.chr18 65072775 27 + 78221452 CCTTTTGGTTAT--GGGAGGACGACAACT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191792 27 + 77229886 CCTTTTGGTTAT--GGGAGGACGACAACT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411289 27 + 17472758 CCTTTTGGTTAT--GGGAAGACGACAACT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451810 27 - 152096393 CCTTTTGGTTAT--GGGAACAGGACAACT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401464 27 + 70235451 CCTTTTGGTTAT--CGGAAGAGGACAGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092774 27 - 75711847 CCTTTTGGTTAT--CGGAAGAGGACAGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652053 27 - 18804593 CCTTTTGGTTAT--CGGAAGAGGACAGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263925 27 + 18905526 CCTTTTGGTTAT--CGGAAGAGGACAGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092220 27 - 72318688 CCTTTTGGTTAT--CGGAAGAGGACAACT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429272 27 - 1517660 CCTTTTGGTTAT--CGGAAGAGGACAGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525370 27 + 6513552 CCTTTTGGTTAT--CGGAAAAGGACAACT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295660 27 + 117903854 GCTTTTGGTTAT--GGAAAGAGGACAACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482925 27 - 31320352 GCTTTTGGTTAT--GGAAACAGGACAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678281 27 + 2203405 GCTTTTGGCTGT--GGAAAGAGGACAACT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630809 27 - 14941987 GCTTTTGGTTTT--GGAAAGAGGACAACT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545496 27 + 83067054 CCTTTTCGTTAT--AGGAAGAGGACAACT i micMur3.chr19 C 0 I 120 s proCoq1.NW_012148742v1 1285577 27 - 1406956 CCTTTTCGCTAT--GGGAAGAGGACAACT i proCoq1.NW_012148742v1 C 0 I 116 s otoGar3.GL873546 11257094 26 - 20685099 CCTTTTCGTTAT--AGGAAAAGGACAAC- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865214 25 + 195471971 CTTTTTGGATAT--TGAGAGAAAACAT-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112336067 26 - 122678785 CCCTTTGGTTACCGGGGGAGAGGACT--- i canFam3.chr1 I 24 I 12 s dasNov3.JH575754 510999 27 - 2150887 CCTTTTCGTTTG--GGGTAGAGGACAGCT i dasNov3.JH575754 C 0 C 0 a score=1066396.000000 s hg38.chr18_GL383571v1_alt 162895 115 + 198278 ATATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATCATCCTTTTGGAAAGAGCAAGGGC s panTro5.chr18 65072802 115 + 78221452 ATATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATCATCCTTTCGGAAAGAGCAAGGGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191819 115 + 77229886 ATATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATCATCCTTTCGGAAAGAGCAAGGGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411316 115 + 17472758 ATATAATAGAGCC-----------------ATAGTGT-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATCATCTTTTTGGAAAGAGCAAGGGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451837 115 - 152096393 ATATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGAACGACAGA------AATCATCCTTTTGGAAAGAGCAAAGGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401491 115 + 70235451 GTATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATTATCCTTTTGGAAAGAGCAAGGGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092801 115 - 75711847 GTATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATTATCCTTTTGGAAAGAGCAAGGGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652080 115 - 18804593 GTATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATTATCCTTTTGGAAAGAGCAAGGGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13263952 115 + 18905526 GTATAATAGAACC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATTATCCTTTTGGAAAGAGCAAGGGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092247 115 - 72318688 GTATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATCATCCTTTTGGAAAGAGCAAGGGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429299 116 - 1517660 GTATAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GAAGGGAGGGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACGGA------AATCATCCTTTTGGAAAGAGCAAGGGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525397 115 + 6513552 GTGTAATAGAGCC-----------------ATAGTGG-----------GGGCTGTGGGAT-TGACT-CAAAT-GATGGGA-GGAGCTGGAGTGGGAGGGGATAAGC----CCTGGGACGACAGA------AATCATCCTTTTGGAAAGAGCAAGGGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295687 98 + 117903854 GTATAATAGAGCC-----------------TTACTGG-----------GGGC-------------------T-GATGGGA-GGAGCTGGAGTGGGAAGGGATAAGC----ACTGGGATGAGAGA------AATCATCCTTTTGGAAAGAGCAAGGTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19482952 98 - 31320352 GTGTAATAGAGCC-----------------GTACTGG-----------GGGC-------------------T-GATGGGA-GGAGCTGGAGTGGGAAGGGATACGC----ACCGGGATGAGAGG------AATCATCCTTTTGGAAAGAGCAAGGGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678308 98 + 2203405 GTATAATAGAGCC-----------------ATACTGG-----------GGGC-------------------T-GATGGGA-GGAGCTGTAGTGGGAAGGGATACGC----ACTGGGAAGAGAGA------AATCATCCTTTGGAAAAGAGCAAGGGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630836 98 - 14941987 GTATAATAGAGCC-----------------ATACTGG-----------GGGC-------------------T-GATGGGA-GGAGCTGGAGTGGGAAGGGATTAGC----ACTAGGATGAGAAA------AATCATCCTTTTGGAAAGAGCAAGGGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11257120 112 - 20685099 -TGTAAGAGGACC-----------------AGGGTGGGGAGGAAGAGAGGGATATGGGGG-TGATTGCAAAT-GATAGGA-GAAACCGGGGTGGGTGCGGATGCG------------------G------AATTGCCCTTTAGGGAAAAGCGAGCGT i otoGar3.GL873546 C 0 I 3 s mm10.chr1 111865239 114 + 195471971 --ATGTTAAACAT-----------------CTAAACG-----------TGACAAGGAGTTGTGATTACAAAT-GATGAGA-GAAACTCTTGGGGGATGGGATGAGTAATGACTGTGGCAGGAGAATATTCAGTTACCCTT-----AAGAGC------ i mm10.chr1 C 0 C 0 s canFam3.chr1 112336105 99 - 122678785 GTGGGAGAGAGAC-----------------A----GG-----------AGTCCCCGGGCA-TGATTACAAAT-GAT---A-GAAGCGGCGACAGGCGGGATAATGC----TGTAGGACGTCAGG----------------TGAGGAGGAGCAGTGGA i canFam3.chr1 I 12 C 0 s dasNov3.JH575754 511026 131 - 2150887 --TGAACGGAGGCTGGGCGTTGAGAAGTAGACGGAGA-----------AGTTTCCGGGGA-TGATTACAAATGGGTGGGA-GAGGCGGGGGTGGCGGGAATGACGC----GGTGGGACGACTGT------CCTCGCGCTTTTGG-AAGAGGAAAGAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41545523 120 + 83067054 I e proCoq1.NW_012148742v1 1285604 116 - 1406956 I a score=33367.000000 s hg38.chr18_GL383571v1_alt 163010 3 + 198278 -TGG s panTro5.chr18 65072917 3 + 78221452 -TGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191934 3 + 77229886 -TGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411431 3 + 17472758 -TGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451952 3 - 152096393 -TGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401606 3 + 70235451 -TGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092916 3 - 75711847 -TGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652195 3 - 18804593 -TGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264067 3 + 18905526 -TGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092362 3 - 72318688 -TGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429415 3 - 1517660 -TGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525512 3 + 6513552 -TGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295785 3 + 117903854 -TGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19483050 3 - 31320352 -TGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678406 3 + 2203405 -TGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630934 3 - 14941987 -TGG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1285720 3 - 1406956 -TGG i proCoq1.NW_012148742v1 I 116 C 0 s otoGar3.GL873546 11257235 2 - 20685099 -TG- i otoGar3.GL873546 I 3 C 0 s mm10.chr1 111865353 3 + 195471971 -TGA i mm10.chr1 C 0 C 0 s canFam3.chr1 112336204 3 - 122678785 -CGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511157 3 - 2150887 TTG- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41545523 120 + 83067054 I a score=2931315.000000 s hg38.chr18_GL383571v1_alt 163013 202 + 198278 GGAAGGAGGGAATGAGCACTCCCTTGGAACTGAGAGGCAGCCTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCGAAATACCCAGATTAATATAG-GAGGACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGCTTTACTGATGGAAAACAATTTCTCAGGCAGTATAAAT-AGG- s panTro5.chr18 65072920 202 + 78221452 GGAAGGAGGGAATGAGCACTCCCTTGGAACTGAGAGGCAGCCTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCGAAATACCCAGATTAATATAG-GAGGACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGATTAATCAGCTTTACTGATGGAAAACAATTTCTCAGGCAGTATAAAT-AGG- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64191937 202 + 77229886 GGAAGGAGGGAATGAGCACTCCCTTGGAACTGAGAGGCAGCCTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCGAAATACCCAGATTAATATAG-GAGGACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGCTTTACTGATGGAAAACAATTTCTCAGGCAGTATAAAT-AGG- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411434 202 + 17472758 GGAAGGAGAGAATGAGCACTCCCTTGGAACTGAGAGGCAGCCTGGTTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACCCAGATTAATATAG-GAGGACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGCTTTACTGATGGAAAACAATTTCCCAGGCAGTATAAAT-AGG- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139451955 202 - 152096393 GGAAGGAGGGAATGAGCACTCCCTTGGAACTGAGAGGCAGCCTAGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACCCAGATTAATATAG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGCTTTACTGATGGAAAACAATTTCTCAGGCAGTATAAAT-AGG- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401609 202 + 70235451 GGAGGGAGGGAACGAGCAGTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACTCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGGTTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63092919 202 - 75711847 GGAGGGAGGGAACGAGCAGTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACTCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGGTTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652198 202 - 18804593 CGAGGGAGGGAACGAGCAGTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACTCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGGTTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264070 202 + 18905526 GGAGGGAGGGAACGAGCAGTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTCTC-CTTTGGAAAAGCAAAACCAAAATACTCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGGTTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092365 202 - 72318688 GGAGGGAGGGAACGAGCAGTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACTCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGGTTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429418 202 - 1517660 GGAGGGAGGGAATGAGCAGTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACTCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGAGAAAACAGAAAAGACTAATCAGGTTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525515 202 + 6513552 GGAGGGAGGGAACGAGCACTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAAAGCAAAACCAAAATACCCAGATTAATATGG-GAGAACAACTTCTGTAGCCCAGATGCTAACAAAGATCAAGGGAAAACAGAAAAGACTAATCAGATTTACTGATGGAAAACAATTCCTCAGGCAGTATAAAT-AAG- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295788 201 + 117903854 -GAGGGAGGGAATGAGCATTCCCTTGGAACTGAGAGGCAGCCTGGCTGAGCTTGCTGTC-CTTTGGAAGAGTAAAACCAAAATATCCAGATTAATACAG-AAGAATAACTTCTGTAGCCCAGATGCTAGCAAAGATCAGGGGAAAACAGAAAAGACTAATCAACTTTACTGATGGAAAACAATTTCTCAGGCAGTATAAAT-AGG- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19483053 198 - 31320352 -GAGGGAGGGCATGAGCACTCCCTTGGAACTGAGAGGCAGCCTGGCTAAGCTTGCTGTC-CTTTGGAAAAGTAAAACCAAAATATTCAGATTAATAC----AGAATAACTTCTGTAGCCCAGATGCTAGCAAAGACCAGGGGAAAACAGAAAAGACTAATCAACTTTACTGATGGAAAACAATTTATCAGGCAGTATAAAT-AGG- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678409 201 + 2203405 -GAGGGAGGGGATGAGCGCTCCCTTGGAACTGAGAGGCAGCTTGGCTGAGCTTGCTGTC-CTTTGGAAGAGTAAAACCAAAATATCCAGATTAATACAG-AAGAATAACTTCTGTAGCCCAGATGCTAGCAAAGATCAGGGGAAAACAGAAAAGAATAATCAACTTTACTGATGGAAAACAATTTCTCAGGCAGTATAAAT-AGG- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3630937 199 - 14941987 -GAGGGAGGGAATGAGCACTCCCTTGGAACTGAGAGACCGCCTGGCTGAGCTTGCTGTC-CTTTGGAAGAGTAAAACCAAAATATCCAGATTAATAC----AGAATAACTTCTGTAGCCCAGATGGTAGCAAAGATCAGGAGAAAACAGAAAAGACTAATCAACTTTACTGATGGAAAACAATTTCTCAGGTAGTATAAATAAGG- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545643 202 + 83067054 GGAGGGAAGGAATGAGCACTCCCTTGGAACTGAGAGGCCGCTTGGCTGAGGTGGTTGTC-GTTTACAAAGGCAAAATCAGAATATCCAGATTAATATAT-GAGAACAACTTCAGAAGCCCAGATGCTAATACAGCTCAGGCGAAAACAACAAAGTCTAGTCAGCTTTACTGAATGAAAATAATTTCTGCAGCAGTATAAAC-AGG- i micMur3.chr19 I 120 I 145 s proCoq1.NW_012148742v1 1285723 202 - 1406956 GGAGGGAAGGAACGAGCACTCCCTTGGAACTGAGAGGCCGCTTGGCTGAGGTGGCTGTC-ATTTAGAAAGACAAAATCAGAATATGCAGATTAATATAT-GAGAACAACTTCAGTAGCCCAGATGCTAATACAGCTCAGGGGAAAACAACAAAGTCTAATCAGCTTTACTGAATGAAAATAATTTCTGCAGCAGTATAAAC-AGG- i proCoq1.NW_012148742v1 C 0 I 1 s otoGar3.GL873546 11257237 183 - 20685099 GGGAGAGAAGAAGGCGCACTCCTTTGGAA----------------TTGAGGTGGCTGTC-ATTTAC--AGACAAATTCAGAATA-AAGGATTAATCTAT-GAGAACAACTTCAGTAGCCCAGAAGCTCATAAAGGTCAGGGGCAAACAACAAAAACTAACCAGCTTTACTGAGTGAAAATCATTTCTGCAGCAGTCTAATC-AGG- i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111865356 163 + 195471971 AAAAGGACTCTATAAGCACTTCTTTGAAATTCTGAGGCACACTTGCTGACATTGCTATC-A--TAGACAAACAAACCCAAAATATCCAGATTAATATAGTAGGAACAACTTCAATAG-CCAAATGT----------------------------ACTAGTCATCTCTACGGATTGAAAG-----TTTCTGCTAGATTGAA------ i mm10.chr1 C 0 C 0 s canFam3.chr1 112336207 174 - 122678785 GGAAGAAGGGA-------------------TGAGAGGCAGCTTGGCTGAGGTCGCTGTC-ATTTAGGAAGGCAAAGTCAATATA-CCAGATTAATA--G-GAGAATGACTTCAGGAGCACAGATGCT---AAAGATCAGAGGAAAACA-AAAAGGCTAATCAGTTTTATTGATTGAAA-TAATTTATCCGGCAGTGTAA-T-ATG- i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 511160 194 - 2150887 ---AGATGGAAAGAAGAACTCCGTTGGG--TGGGAGCCAGCCTGGCTGATGT-GCCGTCGCTTTAGAAAAGCAAAATGACGACACCGATATTAATTTGT-CA-AATGACGTTGGGAGCATAGATGCT---AAACATCAGGAGGAAATGAAAGAGCCTAATGCGCTGTACTGATTGAAGATAATTTCTCTGGCAGTATAAAT-ATGG i dasNov3.JH575754 C 0 C 0 a score=494803.000000 s hg38.chr18_GL383571v1_alt 163215 35 + 198278 GGAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT s panTro5.chr18 65073122 35 + 78221452 GGAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192139 35 + 77229886 GGAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411636 35 + 17472758 GGAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452157 35 - 152096393 GGAAGCATGAGACAAACAAGTAGAAGGAGCCT----CTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401811 34 + 70235451 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093121 34 - 75711847 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652400 34 - 18804593 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264272 34 + 18905526 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092567 34 - 72318688 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429620 34 - 1517660 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525717 35 + 6513552 GGAAGCATGGAACAAACAAGTAGAAGGAGCCT----CTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105295989 35 + 117903854 GAAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19483251 35 - 31320352 GGAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678610 35 + 2203405 GGAAGGATGGGACAAACAAGTAGAAGGAACCT----CTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631136 35 - 14941987 GGAAGCATGGGACAAACAAGTAGAAGGAGCCT----CTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1285926 39 - 1406956 GAAAATATGGGACAAACAGGTAGAAGGAGCCTCTTACTT i proCoq1.NW_012148742v1 I 1 C 0 s otoGar3.GL873546 11257421 35 - 20685099 AAAGATAAGGGAGAAATGGGTGGAAGGAGCCT----CTT i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111865519 35 + 195471971 GCAAATATGGGACAAGCAATCAGTAGAAAACT----GTT i mm10.chr1 C 0 I 32 s canFam3.chr1 112336382 35 - 122678785 GGCGGTGTGGGACAAACAAGGGGAAGGGATCT----CTT i canFam3.chr1 I 1 I 4 s dasNov3.JH575754 511354 31 - 2150887 GGAAGCATGGAATAAACAGGTAG----AGCCT----CTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41545845 145 + 83067054 I a score=849693.000000 s hg38.chr18_GL383571v1_alt 163250 74 + 198278 -ATT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGCTACTAC s panTro5.chr18 65073157 74 + 78221452 -ATT-TAA--AAATGGGACCTGGTGTTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGCTACTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192174 74 + 77229886 -ATT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGCTACTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411671 72 + 17472758 -ATT-TAA--AAATGGGACCTGGTATTCGGTAA--AC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGCTACTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452192 74 - 152096393 -ATT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401845 73 + 70235451 --TT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093155 73 - 75711847 --TT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652434 73 - 18804593 --TT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264306 73 + 18905526 --TT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092601 73 - 72318688 --TT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACGTGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429654 73 - 1517660 --TT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACGTGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525752 74 + 6513552 -ATT-TAA--AAATTGGAGTTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTGCCCCGGTTACTGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296024 73 + 117903854 -ATT-TAA--AAATGGGACCTGGTATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTT-CCCGATTACTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19483286 73 - 31320352 -ATT-TAA--AAATGGGACTTGGTATTCGGTAAAGAC---CTACATGCAGGCAGGAGAAGGCAGTGTG-CCCGGTTACTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678645 73 + 2203405 -ATT-TAA--AAATGGGACCTGGTATTCTGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTG-CCCGGTTACTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631171 73 - 14941987 -ATT-TAA--AAATGGGACCTGATATTCGGTAAAGAC---CTACATGCAGACAGGAGAAGGCAGTGTG-CCCGGTTACTGT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1285965 72 - 1406956 -GTTAAAA--AAATGGAAACTGGCTTTCGGTCAAGAAAGCCTGCATGTGG---GAAGAAGGCTGTGTGCCTTGGTTAC--- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257456 69 - 20685099 -GTTACAA--AAATGAAAACTGGCTTTCAGTAAAGAA---CTGCAGAGGGGCAGGAGAAGGCCGTGT--CGTGG-GAC--- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112336421 68 - 122678785 -GTT-AAAG-AAATGAAAACGGGAATTCGGTAAAGAC---CCACAAGCAG-------GAGACAGTGTGTCTCGGTTACTAT i canFam3.chr1 I 4 C 0 s dasNov3.JH575754 511385 72 - 2150887 TCTC-TAAGAAAATAGAAACTGGTCTTTTGTGAAGAC---CT----GCAGATGGGAGAAGGCAGTAAGCGTTGGTGTTTT- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41545845 145 + 83067054 I e mm10.chr1 111865554 32 + 195471971 I a score=2428866.000000 s hg38.chr18_GL383571v1_alt 163324 194 + 198278 GACATGTGAGTGCAGTGCCAGGTCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGCACTCCACACATGGAGCTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGCTCTGACCTCAAATGTAAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG s panTro5.chr18 65073231 193 + 78221452 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGCACTCCACATATGGAGTTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAGCCAACCCAAGCTCTGACCTCAAATGTAAAAAA-AA-TAGCTTATTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192248 193 + 77229886 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAG-GCAGGCTGGGACTCC-----TGTTGCACTCCACATATGGAGCTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAGCCAACCCAAGCTCTGACCTCAAATGTAAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411743 194 + 17472758 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGCACTCCACATATGGAGCTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGCTCTGACCTCAAATGTAAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452266 189 - 152096393 GACATGTAAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCA-----GGACTCC-----TGTTGCACTCCACATATGGAGCTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCGAGCTCTGACCTCAAATGTAAAAGATAA-TAGCTTAGTAGTAGTAAAAATACAGGGAAATATCAAGCTTCACAAATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57401918 194 + 70235451 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCT-----TGTTGTACTCCACATATGGAACTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093228 194 - 75711847 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGTACTCCACATATGGAACTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652507 194 - 18804593 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGTACTCCACATATGGAACTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264379 194 + 18905526 GACATGTGAGTGCAGGGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTTC-----TGTTGTACTCCACATATGGAACTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCCTAAATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092674 194 - 72318688 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGTACTTCACATATGGAACTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429727 189 - 1517660 GACATGTGAGTGCAGGGCCAGGGCGTGGAAATCC-----TAGAGCAGACTGGGACTCC-----TGTTGTACTCCACATATGGAACTTCTCACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA------TAGTAGTAATAAAAATACAGGGAAATATCAAGCTTCACAAATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3525826 193 + 6513552 AACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGACTCC-----TGTTGTACTCCACATATGGAACTTCT-ACAGATAGCTGAGATGACAC---TTTGGCATAAACCAACCCAAGGTCTGACCTCAAATGTCAAAAATAA-TAGCTTAGTAGTAATAAAAATACAGGGAATTATCAAGCTTCACAAGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296097 192 + 117903854 GACATGTGAGT-CAGTGCCTGGACGTGGAAATCC-----TAGAGCAGGCTGGGAATAC-----TGTTGAACTTCACATATGGAACTTCTCACAGATAGGTGAGATGACAC---TTTGGCATAAACTAACCCAAGGTCTGACCTCGGATGTCACAAATAA-TAACTTAGTAGCAATAGGACTACAGGGAAATA-TAAACTTCACAAATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19483359 173 - 31320352 GACATGTAAGTGCAGTGCC---------------------AGGGCACACTGGGAATAC-----TGTTGTACTTCACATATGGAACTTCTC----ATAGATGAGATGACAC---TTTGGCGTAAACTAACCCAAGGTCTGACCTCAGATGTCACAAATAA-TAACTTAGTAGCAATAGGAATACAGGGAAATA-CAAACTTCACAAATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678718 193 + 2203405 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGAATAC-----TGTTGTACTTCACATATGGAACTTCTCACAGATAGATGAGGTGGCAC---TTTGGCGTAAACTAACCCAAGGTCTGACCTCAGATGTCACAAATAA-TAACTTAGTAGCAATAGGAATACAGGGAAATA-TAAACTTCACAAATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631244 193 - 14941987 GACATGTGAGTGCAGTGCCAGGGCGTGGAAATCC-----TAGAGCAGGCTGGGAATAC-----TGTTTTACTTCACATATGGAACTTCTCACAGATAGATGAGATGACAC---TTTGGCGTAAACTAACCCAAGGTCTGACCTCAGATGTCACAAATAA-TAACTTAGTAGCAATAGGAATACAGGGAAATA-CAAACTTCAAAAATG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1286037 195 - 1406956 --CATGCGTGTGCAGTTTCGGGGTTTGGAAATCC-----TGGAGCGGACTGTGATTGC-----TGTTGCACTCGACATGCGGAACTTCTCACAGATACCTGCAGTTACGCTTCTTTGGCGTAAGCCTCCCCAGCCTCTGACCTCCAATATCACAAGTAA-TAACTCAGTAGTAATAGGAACACAGTGAAACATCAAGCTTCACAAATG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257525 168 - 20685099 --CAGGTGCCTGCGATTCC-GGGTTTGTTAATCC-----TAGAGCA---TGTGATTGC-----TGTTGCACGGGGCATGTGGAACTTCTCAGGGATAGCTGCGATTACACT--TTGGACATGGGCCACCTCAACCTCTGACGTTTCATATCCCAAGTAG-TAAC---------------------TGAAATATCAAGCTTCACAAATG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865586 177 + 195471971 GGCATGTG-----AAATTTGAAGCTTGGAAATTCAGTCGCAGAATAGACTGAGATTTTGTTCACATTGTACT-CACTCAGAGCACTTTCCACAG---TCTTAGGTTACAC---TTGGACATAGGCCAACCTATAGTCTGCTC---------------AA-TAACTTGGAGGTAGT---AATACAAGGAGCTGTCATGGTTCACTGGTT i mm10.chr1 I 32 C 0 s canFam3.chr1 112336489 189 - 122678785 GACACCTGCATGCAACTCCACGGTTCAGAAACGC-----TAGAGCA-GTTGTGAATCC-----TGTTGTATTCGACATATGGAATTTCTCACAGATATCTGAGATTGCGC---TTCAGCGTGAGCCAACCCAAGGTCTGATCTCCACTATTAC----AG-TAACTTAGGAATCATAGCAACCCGGTAAAATATCAAGCCTCATCAACA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511457 190 - 2150887 GACATGCGTGTGCAATTCCAGGGTTTGAAAATCC-----TAGAGCA-GCTGTGAA--C-----TCTTATACTCAACATATGGAATTTCTCACACATATCCGAGATTATGC---TTCAGCATGAGCCAACCCTAAGTCTGACCTCAAATGTCACAAATACTTTTCTCAATAGTAATACGACAGTA--AAAATATCAGGTATCACAAATG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41545845 145 + 83067054 I a score=864528.000000 s hg38.chr18_GL383571v1_alt 163518 63 + 198278 AACAATTCCATTCTCAGTTGGGGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATACTATTT s panTro5.chr18 65073424 63 + 78221452 AACAATTCCATTCTCAGTTGGGGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATACTATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192441 63 + 77229886 AACAATTCCATTCTCAGTTGGGGATTAGTAACACATTCAGTCTCTTCAT-TTCACATACTATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5411937 63 + 17472758 AACAATTCCATTCTCAGTTGGGGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATACTATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452455 63 - 152096393 AACAATTCCATTCCCAGTTGGGGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATACTATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402112 63 + 70235451 AACAATTTCATTCCCAGTTGGGGATTAGTAACTCGTTCAGTCTCTTCAT-TTCCCATACTATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093422 63 - 75711847 AACAATTTCATTCCCAGTTGGGGATTAGTAACTCGTTCAGTCTCTTCAT-TTCCCATACTATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652701 63 - 18804593 AACAATTTCATTCCCAGTTGGGGATTAGTAACTCGTTCAGTCTCTTCAT-TTCCCATACTATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264573 63 + 18905526 AACAATTTCATTCCCAGTTGGGGATTAGTAACGCGTTCAGTCTCTTCAT-TTCCCATACTATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092868 63 - 72318688 AACAATTTCATTCCCAGTTGGGGATTAGTAACGCGTTCAGTCTCTTCAT-TTCCCATACTATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429916 63 - 1517660 AACAATTTCATTCCCAGTTGGGGATTAGTAACGCGTTCAGTCTCTTCAT-TTCCCATACTATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526019 63 + 6513552 AACAATTTCATTGCCAGTTGGGGATTAGTAACGCGTTCAGTCTCTTCAT-TTCCCATACTATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296289 57 + 117903854 AATAATTCCATTCCCAG-TGGAGATTAGTAACACATTCAGTCTC------TTCCCATACTATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19483532 63 - 31320352 AACAATTCCATTCCCAGTTGGAGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATAGTATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1678911 63 + 2203405 AACAATTCCTTTCCCAGTTGGAGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATACTATTT i cebCap1.NW_016107689v1 C 0 I 338 s aotNan1.NW_018502140v1 3631437 63 - 14941987 AACAATTCCATTTCCAGTTGGAGATTAGTAACACATTCAGTCTCTTCAT-TTCCCATACTATTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41545990 63 + 83067054 AACAATTCCATCCTAAAATGGGAATTAGTAACACATTCAGTCTCCTTCT-ATGCCATAGTGTTT i micMur3.chr19 I 145 C 0 s proCoq1.NW_012148742v1 1286232 64 - 1406956 TACGATTCCATCCTAAGTTGGGAATTAGTGACACATTCAGTCTCCTCCTAATACCATACTGTTT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257693 62 - 20685099 TACAGTTCCACCATGAG-TAGGGATTAGTGACATGCTCCGTCTCCTCCT-ATGCCATACTGTTT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865763 60 + 195471971 -TAAACTTCATCCCTAGATGTGGATTAGTTAAAC-TTCAGTTTTCTTCT-AACCCCTATTATT- i mm10.chr1 C 0 C 0 s canFam3.chr1 112336678 63 - 122678785 AACAAGCCTATCCCCAGTTGGGGATTGGTGATACCTTCATACCCCTCCA-ATTCCATTCCATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511647 58 - 2150887 AAGACTTTCATCCACCA-TAGGAATT-GAAAAGCCTTTGCTCTCTT----GCCACAGCCCATTT i dasNov3.JH575754 C 0 C 0 a score=21021.000000 s hg38.chr18_GL383571v1_alt 163581 1 + 198278 T s panTro5.chr18 65073487 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192504 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412000 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452518 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402175 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093485 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652764 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264636 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092931 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429979 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526082 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296346 1 + 117903854 T i calJac3.chr13 C 0 I 336 s saiBol1.JH378121 19483595 1 - 31320352 T i saiBol1.JH378121 C 0 I 330 s cebCap1.NW_016107689v1 1679312 1 + 2203405 T i cebCap1.NW_016107689v1 I 338 C 0 s aotNan1.NW_018502140v1 3631500 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 I 337 s micMur3.chr19 41546053 1 + 83067054 T i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1286296 1 - 1406956 T i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257755 1 - 20685099 T i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865823 1 + 195471971 T i mm10.chr1 C 0 C 0 s canFam3.chr1 112336741 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511705 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 a score=1396719.000000 s hg38.chr18_GL383571v1_alt 163582 110 + 198278 GGTAATATTTAATAAGATAT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCATTTGCTGCTGAAAATCAAACAGTAGACGACTGCTAGCAGAATAAATTTCAAA s panTro5.chr18 65073488 110 + 78221452 GGTAATATTTAATAAGATAT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCATTTACTGCTGAAAATCAAACAGTAGACGACTGCTAGCAGAATAAATTTCAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192505 110 + 77229886 GGTAATATTTAATAAGATAG-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCATTTACTGCTGAAAATCAAACAGTAGACGACTGCTAGCAGAATAAATTTCAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412001 110 + 17472758 GGTAATATTTAATAAGATAT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCATTTACTGCTGAAAATCAAACAGTAGACGACTGCTAGCAGAATAAATTTCAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452519 110 - 152096393 GGTAATATTTAAGAAGATAT-ATTTTAACATTTTAAAACTAAATGTCTTGCTTAGATCATTTACTGGTGAAAATCAAACAGTAGACGACTGCTAGCAGACTACATTTCAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402176 109 + 70235451 GGTAATATTTAAT-AGATCT-GTTTTAACATTTTAAAAATAAATGTCTTGATTGGATCCTTTACTGGTGAAAATCAAACAGTAGACGACTGTTAGCAGAATAAATTTCAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093486 109 - 75711847 GGTAATATTTAAT-AGATCT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTGGATCCTTTACTGGTGAAAATCAAACAGTAGACGACTGTTAGCAGAATAAATTTCAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652765 109 - 18804593 GGTAATATTTAAT-AGATCT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTGGATCCTTTACTGGTGAAAATCAAACAGTAGACGACTGTTAGCAGAATAAATTTCAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264637 109 + 18905526 GGTAATATTTAAT-AGATCT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCCTTTACTGGTGAAAATCAAGCAGTAGACGACTGTTAGCAGAATAAATTTCAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60092932 108 - 72318688 -GTAATATTTAAT-AGATCT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCCTTTATTGATGAAAATCAAACAGTAGACGACTGTTAGCAGAATAAATTTCAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 429980 109 - 1517660 GGTAATATTTAAT-AGATCT-ATTTTAACATTTTAAAAATAAATGTCTTGCTTAGATCCTTTACTGGTGAAAATCAAACAGTAGACGACTGTTAGCAGAATAAATTTCAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526083 109 + 6513552 GGTAATATTTAAT-AGATAT-ATTTGAACATTTTAAAAATAAATGTCTTGCTTAGGTCCTTTACTGGTGAAAATCAAACAGTAGACGACTGTTAGCAGAATAAATTTCAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296683 109 + 117903854 GGTAATATTTAATAAGATAT-ATTTTAACGTCTTAAAAATAAATGTCTTGCTTCGATCATTTACTGGTGAAAATCAAACATTAGACTACTGCTAGCAGAAT-AATTTCAAA i calJac3.chr13 I 336 C 0 s saiBol1.JH378121 19483926 110 - 31320352 GGtaatatttaataagatataattttaacattttaaaaataaatGTCTTGCTTTGATCATTTACTGGTGAAAATCAAACATGAGACTACTGCTAGCAGAAT-AATTTCAAA i saiBol1.JH378121 I 330 C 0 s cebCap1.NW_016107689v1 1679313 110 + 2203405 GGTAATATTTAATAAGATATATTTTTAACATTTTAAAAATAAATGTCTTGCTTTGATCATTTACTGGTGAAAATCAAACATTAGACTACTGCTAGCAGAAT-AATTTCAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631838 111 - 14941987 GGTAATATTTAATAAGATATATTTTTAACATTTTAAAAATAAATGTCTTGCTTTGATCATTTACTGGTGAAAATCAAACATTAGACTACTGCTAGCAGAATAAATTTCAAA i aotNan1.NW_018502140v1 I 337 C 0 s micMur3.chr19 41546054 109 + 83067054 GGTAATATTTAATAAGATGT-ATTAAAA-ATGTTAAAAATGAGAGTCTTGCTTAGGTCACTTCCTTGTAAAAATCAAAGAGCAGACCATTGCTAGCAGAATGAATTTCAAA i micMur3.chr19 C 0 I 74 s proCoq1.NW_012148742v1 1286297 109 - 1406956 GGTGATATTTAATAAGATGT-ATTAAAA-TTGTTAGAAATGAGAGCCTTGCTTGGATCACTTCCTGGTAAAAGTCAAAGAGTAGACCATTGCTAACAGAATGAATTTCAAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257756 104 - 20685099 GGCaatatt---taagattt-ttttttt-ttttttaaaCT--GAGTCTTGCTTATGTTACTTCCCGGTAAAGATGAAAGAGTAGGCCATTGCTAGCAGAATGAATTTCAAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865824 93 + 195471971 GCTAAAATGCAC--AGCTGT-ATTCTTAGGTGGGAAAAGCAGTTGT-------------TTGAATGACAAGAAT--AATAAGAAAAGATAACTGATAAAGTTAACTTGAGA i mm10.chr1 C 0 C 0 s canFam3.chr1 112336742 95 - 122678785 GCTAAAAT------GGACAG-GTTCGTCCAT--------TAAAAACCTTGCTTAGATCATTT-CTTTTCATGACTACATGGTAGACCATTACTAGCAGAAAAAATTTCAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511706 103 - 2150887 GGTAATAAGGAC--AGATGT-ATCCA-----TTAAAAGATGAGCATCTTGCTTAGATCATGTCCTGCTAAAAATCAAGCAGTAGATCATTGCTAGCATAATGAATTTCAAA i dasNov3.JH575754 C 0 C 0 a score=288390.000000 s hg38.chr18_GL383571v1_alt 163692 22 + 198278 TCATTTAACTTTGAGGTGAAAT s panTro5.chr18 65073598 22 + 78221452 TCATTTAACTTTGAGGTGAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192615 22 + 77229886 TCATTTAACTTTGAGGTGAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412111 22 + 17472758 TCATTTAACTTTGAGGTGAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452629 22 - 152096393 TCATTTAACTTTGAGGTGAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402285 22 + 70235451 TCATTTAACTTTGAGGTGAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093595 22 - 75711847 TCATTTAACTTTGAGGTGAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652874 22 - 18804593 TCATTTAACTTTGAGGTGAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264746 22 + 18905526 TCATTTAACTTTGAGGTGAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093040 22 - 72318688 TCATTTAACTTTGAGGTGAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430089 22 - 1517660 TCATTTAACTTTGAGGTGAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526192 22 + 6513552 TCATTTAACTTTGAGGTGAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296792 22 + 117903854 TCATTTAACGTTGAGGGAAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484036 22 - 31320352 TCATTTAATGCTGAGGTGAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1679423 22 + 2203405 TCATTTAACGCTGAGGTGAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631949 22 - 14941987 TCATTTAACGTTGAGGTGAAAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1286406 22 - 1406956 TAATTTAACTAGGAGGTGAAAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257860 22 - 20685099 TAATTTGACTAAGACGTGAAAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865917 21 + 195471971 GCATGTAATTAT-AGACAAACT i mm10.chr1 C 0 C 0 s canFam3.chr1 112336837 22 - 122678785 TAATTTATCTTAGATATAAGAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511809 17 - 2150887 -----TAACTTGGAAGGGAAAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41546163 74 + 83067054 I a score=219297.000000 s hg38.chr18_GL383571v1_alt 163714 17 + 198278 GTGGCCTCTAACTCCTC s panTro5.chr18 65073620 17 + 78221452 GTGGCCTCTAACTCCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192637 17 + 77229886 GTGGCCTCTAACTCCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412133 17 + 17472758 GTGGCCTCTAACTCCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452651 17 - 152096393 GTGGCCTCTAACTCCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402307 17 + 70235451 GTGGCCTCTAACTCCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093617 17 - 75711847 GTGGCCTCTAACTCCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652896 17 - 18804593 GTGGCCTCTAACTCCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264768 17 + 18905526 GTGGCCTCTAACTCCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093062 17 - 72318688 GTGGCCTCTAACTCCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430111 17 - 1517660 GTGGCCTCTAACTCCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526214 17 + 6513552 GTGGCCTCTAACTCCTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296814 17 + 117903854 GCGGCCTCCAACTCTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484058 17 - 31320352 GTGGCCTCTAACTCTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1679445 17 + 2203405 GTGGCCTCTAAATCTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631971 17 - 14941987 GTAGCCTCTAACTCTTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1286428 17 - 1406956 GTGGCCTCAACCTGCTT i proCoq1.NW_012148742v1 C 0 I 34 s otoGar3.GL873546 11257882 17 - 20685099 GTGGCCTTGGCCTGTTC i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 511826 17 - 2150887 TTAGCCTCTACATCCTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41546163 74 + 83067054 I e mm10.chr1 111865938 0 + 195471971 C e canFam3.chr1 112336859 0 - 122678785 C a score=253150.000000 s hg38.chr18_GL383571v1_alt 163731 33 + 198278 ATCACTCTTCTGTTTTGGCCCCGTAGTAACCCC- s panTro5.chr18 65073637 32 + 78221452 ATCACTCTTCTGTTTTGGCCCCGTAGTAA-CCC- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192654 32 + 77229886 ATCACTCTTCTGTTTTGGCCCCGTAGTAA-CCC- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412150 32 + 17472758 ATCACTCTTCTGTTTTGGCCCCGTAGTAA-CCC- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452668 32 - 152096393 ATCACTCCTCTATTTTGGCCCCTTAGTAA-CCC- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402324 31 + 70235451 ATCACTCTTCTACTTTGG-CCCGTAGTAA-CCC- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093634 31 - 75711847 ATCACTCTTCTACTTTGG-CCCGTAGTAA-CCC- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652913 31 - 18804593 ATCACTCTTCTACTTTGG-CCCGTAGTAA-CCC- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264785 31 + 18905526 ATCACTCTTCTACTTTGG-CCGGTAGTAA-CCC- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093079 31 - 72318688 ATCACTCTTCTACTTTGG-CCCATAGTAA-CCC- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430128 31 - 1517660 ATCACTCTTCTACTTTGG-CCCGTAGTAA-CCC- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526231 31 + 6513552 ATCACTCTTCTACTTTGG-CCCATAGTAA-CCC- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296831 32 + 117903854 ATCACTCTTTCATTTCGTCGCTGTGGTAA-CTC- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484075 32 - 31320352 ATCACTCTTCTATTTTGTCACTGTAGTAA-TTG- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1679462 32 + 2203405 ATCACTCTTCTATTTTGTCACTGTAGTAA-CTG- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3631988 32 - 14941987 ATCACTCTTCTATTTTGTCAATGTAGTAA-CTC- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11257899 32 - 20685099 GTAGTCCTTTCACTTCATCCCAGGGGGAT-CTT- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865938 28 + 195471971 ---ACTCTTATA-TTTGCCCTGGTTGGAA-CTG- i mm10.chr1 C 0 C 0 s dasNov3.JH575754 511843 25 - 2150887 ATCAC--------TTTGTCCCCATGGGAA-CCCT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41546163 74 + 83067054 I e proCoq1.NW_012148742v1 1286445 34 - 1406956 I e canFam3.chr1 112336859 0 - 122678785 C a score=777848.000000 s hg38.chr18_GL383571v1_alt 163764 57 + 198278 TAGCCCAGTCCAAATAGCCACACTT-GCTTTTGCTTGGGTGCTTCAGTAACTATGCTT s panTro5.chr18 65073669 57 + 78221452 TCGCCCAGTCCAAATAGCCACACTT-GCTTTTGCTTGGGTGCTTCAGTAACTATGCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192686 57 + 77229886 TCGCCCAGTCCAAATAGCCACACTT-GCTTTTGCTTGGGTGCTTCAGTAACTATGCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412182 57 + 17472758 TAGCCCAGTCCAAATAGCCACACTT-GCTTTTGCTTGGGTGCTTCAGTAACTATGCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452700 56 - 152096393 TAGCCCAGTCCAAATGGCCACACTT-GCTTTT-CTCGGGTGCTTCAGTAACTATGCTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402355 57 + 70235451 TAACCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGGCGCTTCAGTAACTATGCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093665 57 - 75711847 TAACCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGGCGCTTCAGTAACTATGCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13652944 57 - 18804593 TAACCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGGCGCTTCAGTAACTATGCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264816 57 + 18905526 TAGCCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGGCGCTTCAGTAACTATGCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093110 57 - 72318688 TAGCCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGGCGCTTCAGTAACTATGCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430159 57 - 1517660 TAACCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGGCGCTTCAGTAACTATGCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526262 57 + 6513552 TAGCCCAGTCCGAATGGCCACGCTT-GCTTTTGCTTGGACGCTTCAGTAACTATGCTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296863 57 + 117903854 TAGCCCAGTCCAAATGGCCACACTT-GCTTTTGCTTCGGAGCTTCTGTAACTATGCTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484107 57 - 31320352 TAGCCAAGTCCAAATGGCCACACTT-GCTTTTGCTTCAGAGCTTCTATAACTATGCTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1679494 57 + 2203405 TAGCCCAGTCCAAATGGCCACACTT-GCTTTTGCTTCTGAGCTTCTGTAACCATGCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632020 57 - 14941987 TAGCCCAGTTCAAATGGCCACACTT-GCTTTTGCTTTGGAGATTCTGTAACTATGCTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41546237 57 + 83067054 TAGCCCAGTCCAAATGGCCAAACTT-GCTTCTGCTTTGGCACTTCAGTAACTATGCTC i micMur3.chr19 I 74 C 0 s proCoq1.NW_012148742v1 1286479 57 - 1406956 TAGCCCAGTCCAAATAGCCAAACTT-GCTTTTGCTTTGGCACTTCAGTAACTATGCTT i proCoq1.NW_012148742v1 I 34 C 0 s otoGar3.GL873546 11257931 55 - 20685099 TAGCCCAGTCC-ACTGGCCAAACTG-GCCTTTGCTCTGGCCCTCCAGTAACTGTG-TT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111865966 55 + 195471971 TGTCCCGGTCT-AATAGCTAAAGTA-AGTTTTCCTTTGGCCCCTCAATAATTGAA-AT i mm10.chr1 C 0 C 0 s dasNov3.JH575754 511868 56 - 2150887 AATCCGAGTCTAAATGGCCAGACCTGGCGTTTGCTTTGGTGGCTCGGTG--TTTGTTT i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112336859 0 - 122678785 C a score=1824550.000000 s hg38.chr18_GL383571v1_alt 163821 138 + 198278 ATTCCATTCTTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTAGTTAAAATTCT-TCTGACTGTTGAAATTATCTGATCATCCAGGTCTCAACTCAGATGCTTACATTCTTCTGTAAATAACTCCTAAGTTT s panTro5.chr18 65073726 138 + 78221452 ATTCCATTCTTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTAGTTAAAATTCT-TCTGACTGTTGAAATTATCTGATCATCCTGGTCTCAACTCAGATGCTTACATTCTTCTGTAAATAACTCCTAAGTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192743 138 + 77229886 ATTCCATTCTTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTAGTTAAAATTCT-TCTGACTGTTGAAATTATCTGATCATCCTGGTCTCAACTCAGATGCTTACATTCTTCTGTAAATAACTCCTAAGTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412239 138 + 17472758 ATTCCATTCTTTCCCTCACGGTGTCC-----TTTACCCAACCACC----------CCACTTACTAGTTAAAATTTT-TCTGACTGTTGAAATTATCTGGTCATCCTGGTCTCAACTCAGATGCTTACATTCTTCTGTAAATAACTCCTAAGTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452756 138 - 152096393 ATTCCATTCTTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTAGTTAAAATTTT-TCTGACTGTTGAAATTATCTGATCATCCTGGTCTCAACTCAGATGCTTACATTCTTCTGTAAATAACTCCAAAGTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402412 138 + 70235451 ATTCCATTCCTTCCCTCACGGTGTCC-----TTTACCCAACCACC----------CCACTTACTACTTACAATTTT-TCTGACTCTTGAAATTATCTGATCATCCTGGCCTCAATTCAGATGTTTACATTCTTCTGTAAATAACTCCTGAGTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093722 138 - 75711847 ATTCCATTCCTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTACTTACAATTTT-TCTGACTCTTGAAATTATCTGATCATCCTGGCCTCAATTCAGATGTTTACATTCTTCTGTAAATAACTCCTGAGTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653001 138 - 18804593 ATTCCATTCCTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTACTTACAATTTT-TCTGACTCTTGAAATTATCTGATCATCCTGGCCTCAATTCAGATGTTTACATTCTTCTGTAAATAACTCCTGAGTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13264873 138 + 18905526 ATTTCATTCCTTCCCTCACAGTGTCC-----TTTACTCAACCACC----------CCACTTACTACTTAGAATTTT-TCTGACTGTTGAAATTATCTGATCATCCTGGCCTCAATTCAGATGTTTACATTCTAATGTAAATAACTCCTGAGTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093167 138 - 72318688 ATTCCATTCCTTCCCTCACAGGGTCC-----TTTACCCAACCACC----------CCACTTACTACTTACAATTTT-TCTGACTGTTGAAATTATCTGATCATCCTTGCCTCAATTCAGATGTTTACATTCTTCTGTAAATAACTCCTGAGTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430216 138 - 1517660 ATTCCATTCCTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTACTTACAATTTT-TCTGACTCTTGAAATTATCTGATCATCCTGGTCTCAATTCAGATGTGTACATTCTTCTGTAAATAACTCCTGAGTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526319 138 + 6513552 ATTCCATTCCTTCCTTCATAGTGTCC-----TTTACCCAACCACC----------CCACTTACTACTTACAATTTT-TCTGACTGTTGAAATTATCTGATCATCCTGGTATCAATTCAGATGTTTACATTCTTCTGTAAATAACTCCTGAGTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105296920 138 + 117903854 ATTCAACTTCTTCCCTTACAGTGTCC-----TTTACCCAACCACC----------CCATTTACTAGTTAAAATTTT-TCTGACTGTTGAATTCATCTGGTCATCCTAGTCTCAACTCAGATACTTAAATCCTTCTGTAAATAACTCTTGCTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484164 134 - 31320352 ATTCAGTTTCTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACTAGTTAAATTTTT-T----CTACTGAATTTATCTGGTCATCCTAGTCTCAACTCATATACTTAAATTCTTCTGTAAATAACTCGTGAGTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1679551 134 + 2203405 ATTCAATTTCTTCCCTCACAGTGTCC-----TTTACCCAACCACC----------CCACTTACCAGTGAAATTTTT-T----CTATTGAATTTATCTGGTCATCCTAGTCTCAACTCAGATACTTAAATTCTTCTGTAAATAACTTGTGAGTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632077 138 - 14941987 ATTCAATTTCTTCCCTTACAGTGTCC-----TTTACCCAACCACC----------TCACTTACTAGTTAAATTTTT-TCTGACTATTGAATTTATCTGGTCATCCTAGTCTCAACTCAGATACTTAAATTCTTCTGTAAATAACTCGTGAGTTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41546294 138 + 83067054 ATTCCATTCCTTCCTCCACAGTGTCC-----TTTACCTAGCCACCA---------CCAACTTCTAGGTAAAATTTT--CTCACTGTTAAATTTCCCTTATTGTCCTAGTCTTAGCTCAGATGCTTAAGTTTTTCTGTAAATACCTCCTGAGTTT i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1286536 135 - 1406956 ATTCCATTCCTTCTTTCACAGTGTCC-----TTTACCCAACCACCA---------CCAACTACTACGTAAAATTTT--CTGACTGTTAAATTTCTCTTACTGTCCTAGTCTCAGCTCAAATACTTAAA---TTCTGGAAATACCTCCTGAGTTT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11257986 133 - 20685099 GTTGCCTTCCTTCCATCACAGGGTCC-----TTTACC-AACCACCC---------CAAGCTTCTAGGTAAAGTTTT------CTATTAAATTTCTGTTCCTGTCCTAGTCTCAGCTCAGATGCTTGAGTTGTTCTGTAGATAATTTGTGAGTTT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111866021 135 + 195471971 ATTCTATACCTTCC-TCCCAGTGTCTGTCCAGTCATCCTACCGCCAAAACCCTTCCCAAGTAGCAACTGCAGTTTTCTCTGAA---TGGAATTTTCT---TATCTTAGTCTCCATTCGTATCATTAAATTCCTC-----ATCACTTT------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112336859 128 - 122678785 ATCTCCCTTTTTTCCCCATGG-GTCC-----TCTGCCCAGTGACC-------------------AGTTGCGATTTT-TCTGACTACTGAAGTTCTTTTATCATCCTCATCTCTGCTCAGATGCTTAAATTCCTCTAAAAATACCTCTTAGGTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 511924 123 - 2150887 -ATGCCTTCCTTCCCTCA--GTGTCC-----TCTTCCCAAGTGCA-----------------TTAGCTGAAATTAT-T----CTATTGGAGTACTCTTATTCTCAGAGTCTCAGCTCACATGCTTA-ATTCCTCTGTAAATATCTCCTGAGTTT i dasNov3.JH575754 C 0 C 0 a score=4213856.000000 s hg38.chr18_GL383571v1_alt 163959 355 + 198278 CCCTAGCCAGAATGTATTACTCCAGAACTATATCATTTGTACCTA---TATTCGGCCGTTTAGGTTG-TTTATTTTCTGCTTTCTATTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCAAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCTGCTTTTGAAATGAGTTGAACCTCGAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTTATTCCCAAACAAGGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACATGGCCCCTGATAGAGGAAGAGGACCCATGGCCTCCAACCACATTTAT--GAGAGAGTAGA s panTro5.chr18 65073864 355 + 78221452 CCCTAGCCAGAATGTATTACTCCAGAACTACATCATTTGTACCTA---TATTCGGCCGTTTAGGTTG-TTTATTTTCTGTTTTCTATTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCAAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCTGCTTTTGAAATGAGTTGAACCTCGAACAATTGGGCTGATA----C-AGAGCCTCCTCTCCTCCAC-TGAGGTTTATTCCCAAACAAGGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTgcctc-tacatggcccctgagagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64192881 355 + 77229886 CCCTAGCCAGAATGTATTACTCCAGAACTATATCATTTGTACCTA---TATTCGGCCGTTTAGGTTG-TTTATTTTCTGTTTTCTATTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCAAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCTGCTTTTGAAATGAGTTGAACCTCGAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTTATTCCCAAACAAGGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTgcctc-tacatggcccctgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412377 358 + 17472758 CCTTAGCCAGAATGTATTACTCCAGAACTATATCATTTGTACCTATATTATTCAGCCGTTTAGGTTG-TTTATTTTCTGCTTTCTATTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCAAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCTACTTCTGAAATGAGTTGAACCTCGAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAAGGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTgcctc-tacatggcccctgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139452894 355 - 152096393 CCCTAGCCAGAATGTATTACTCCAGAACTATATCATTTGTAGCTA---TATTCGGCCGTTTAGGTTG-TTTATTTTCTGCTTTCTGTTTCAACTGGTTGACT----CCTGTACTGTATTCAAAAC--TCCTTCAAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCTGCTTTTGAAATGAGTTGAACCTTGAACAATCGGGCTGATA----C-TGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAAGGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACATGGCCCCTGATAGACGAAGAGGACCCATGGCCTCCAACCTCATTTAT--GAGAGAGTAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402550 353 + 70235451 CCCTAGCCAGAATGTATTGCTCCAGAACTATATCATTTGTACCAA---TATTCAGCCCTTTAGGTTG-TATATTTTATGCTTTCTGTTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCGAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCT-CCTTTGAAATGAGTTGAACCTTTAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAAGTTCATTCCCAAACAAGGATCCTCTTCA--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACGTGGTCCCTgatagaggaagaggacccatggcctccaa-ctcatttat--gagaGAGTAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63093860 354 - 75711847 CCCTAGCCAGAATGTATTGCTCCAGAACTATATCATTTGTACCAA---TATTCAGCCCTTTAGGTTG-TATATTTTATGCTTTCTGTTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCGAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCT-CCTTTGAAATGAGTTGAACCTTTAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAAGGATCCTCTTCA--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACGTGGTCCCTgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653139 354 - 18804593 CCCTAGCCAGAATGTATTGCTCCAGAACTATATCATTTGTACCAA---TATTCAGCCCTTTAGGTTG-TATATTTTATGCTTTCTGTTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCGAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCT-CCTTTGAAATGAGTTGAACCTTTAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAAGGATCCTCTTCA--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACGTGGTCCCTgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13265011 354 + 18905526 CCCCAGCCAGAATGTATTGCTCCAGAACTATATCATTTGTACCAA---TATTCAGCCCTTTAGGTTG-TATATTTTCTGCTTTCTGTTTCAACTGGTTGACT----CCTGTACCCTATTCAATAC--TCCTTCGAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCT-CCTTTGAAATAAGTTGAACCTTTAACAATGGGGCTGATA----C-AGAGCCTCATCTCCTCCAC-TGAGGTTCATTCCCAAACAAGGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACGTGGTCCCTgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093305 353 - 72318688 CTCTAGCCAGAATGTATTGCTCCAGAACTGTATCATTTGTACCTA---TATTCGGCCCTTTAGGTTG-TATATTTTCTGCTTTCTCTTTCAACTGGTTGACT----CCTGTACCCTGTTCAAAAC--TCCTTCGAGTCATGAGT-AGCGCTCAAGTCCCC-TTGTAAGTACTATATCT-CCTTTGAAATGAGTTGAACCTTTAACAATTGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAAAGATCCTCTTCT--------GACAC----------AACTTCCTGTAAA-ATC--TGGATTGTACCTC-TACATGGTCCCTgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430354 354 - 1517660 CCCTAGCCAGAATGTATTGCTCCAGAACTATATCATTTGTACCAA---TATTCAGCCCTTTAGGTTG-TATATTTTCTGCTTTCTGTTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCTTCGAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATATCT-CCTTTGAAATGAGTTGAACCTTTAACAATGGGGCTGATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAGGGATCCTCTTCT--------GACAT----------AACTTCCTGTAAA-ATC--TGGATTGTGCCTC-TACGTGGTCCCTgatagaggaagaggacccatggcctccaacctcatttat--gagaGAGTAGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526457 353 + 6513552 CCCTAGCCAGAATGTTTTGCTCCAGAACTATATCATTTGTACGTA---TATTCGGCCCTTTAGGTTG-TATATTTTCTGCTTTCTGTTTCAACTGGTTGACT----CCTGTACCCTATTCAAAAC--TCCCTCAAGTCATGAGT-AGCACTCAAGTCCCCTTTGTAAGTACTATGTCT-CCTTTGAAATGAGTTGAACCTTTAACAATTGAGCT-ATA----C-AGAGCCTCGTCTCCTCCAC-TGAGGTTCATTCCCAAACAAAGATCCTCTTCT--------GACAC----------AACTTCCTGCAAA-ATC--TGGATTGTgcctc-tacatggtccctgatagaggaagaggacccatggcctccaacctcatttat--gagagcgtAGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105297058 353 + 117903854 CTCTAGCCAGAATCTATCACTCCAGAACTGTATCATTTGTACCAA---TATTCAGCCCTTTAGTTTG-TTTATTTTCTGCTTTCTATTTCAAATGGTTTACT----CCTATACCCTGTTCAAAAT--TCCTTCAAGTCATGAGTAAGCACTCAAGTCCCCTTTGTAAGTACTACACCTGCTTTTGAAATGAGTTGAACCTTTAATAATTGGGCTGATA----G-AGCACCTGGTCTCCTCCAC-TGAGGTTCATTCCAAAACAAGGATTCTCTTCT--------AACAC----------AACTTCCTGTAAA-ATC--TGGATTGTCCCGC-TACATAGCCCCTGATAGAGGAAGA---TCCATCACCTCCAACCTCATTTTT--GACAGAGTGCA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1679685 360 + 2203405 CTCTAGTCAGAATCTATTATTCCAAAACTGTATCATTTGTACCTA---TATTCAGCCCTTTAGGTTG-CTTATTTCCTGCTTTCTATTTCAAATGGTTGACT----CCTGTACCCTGTTCAAAAC--TCCTTCAAGTCATGAGTAAGCACTGAAGTCCCCTTTGTAAGTACTATACCTGCTTTTGAAATGAATTGAACCTTTAACAATTGAGCTGATAGAGTG-AGCACCTGGTCTCCTCCAC-TGAGGTTCATTCCAAAACAAGGATTCTCTTCT--------AACAC----------AACTTCCTGTAAA-ATC--TGGGTTGTCCCGC-TACATGGCCCCTGATAGAGGAAGAGGTTCCATCGCCTCCAACCTCATTTAT--GAGAGAGTGCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632215 357 - 14941987 CTGTAGCCAGAATCTATTACTCCAGAACGGTATCATTTGTACCTA---TATTCAGCCCTTTAGGTTGTTTTATTTTCTGCTTTCTATTTCAAATGGTTGACT----CCTGTACCCTGTTCAAAAC--TCCTTCAAGTCATGGGTAAGCACTCAAGTCCCCTTTGTAAGTACTCTACCTGCTTTTGAAATGAGTTAAACCTTTAACAATTGGGCTGAGA----G-AGCGCCTGGTCTCCTCCAC-TGAGGTTCATTCCAAAACAAAGATTCTCTTCT--------AACAC----------AACTTCCTGTAAA-ATC--TGGATTGTCCCGC-TGCATAGCCCCTGATAGAGGAAGAGGATCCATCGCCTCCAACCTCATTTAT--GAGAGAGTGCA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41546432 366 + 83067054 CCCTAGCCAGAATATATTATGCCAGCACTATATTATTTGTATCTC---TATTCAGCCCTTTAGATGG-TATGTGCAATGTTTACTGTTTCACCTGGCTGACTCTTTCTTGTACCCCATTCATAAC--TCCTTCGAGTCATGAGT-AGTACTC-AGTCCCCTTTGTCAGGGCCATATCTGTGTTTGAAAAAAGTTGAACCTTTAACAGTTGGGCTCACA----T-AGATCCCTGTCTTTTCCAC-TGAGGTTCTTTGCAAAAGAAGG---CTCCTCT--------GAGCT-CAGAGACAGAACTTCCAGTGAA-GTTACTGTGTTGTCCCTC-TACATGGCTCTTGACAGAGGAGGATGACCCATGGCCTCCATCCTCATTTAG--TGGAGAGTAGA i micMur3.chr19 C 0 I 43 s proCoq1.NW_012148742v1 1286671 359 - 1406956 CCCTAGCCAGAATATATTATGCCAGCACTATATTATTTGTATCTA---TATTCAGCCCTTTCGATT----------ATGCTTACTATTACACCTGGCTGACTCTTTCTTGTACTCCATTCATAGA--TCCTTCCAGTCATGAGT-AGTACTC-AGTTCCCTTTGTAAGGGCTATATCTGTGTTTGAAAAGAGTTGAACCTTTAACAGTTGGGCTCGCA----T-AGAGCCCTGTCTTCTCCAC-TGAGGTTCTTTGCAAAAGAAGGATTCTCCTCT--------GACCTCCAGAGACAGAAATTCCAGTAAA-GCG--TGTATTGTACCTC-CACATGGGCCCTGATAGAGGAGGATGACCCATAGCCTCCATCCTCATTTAG--GGGAGAGTAAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11258119 337 - 20685099 CCTGACCCAGGCAGTGTTATGCAAGCACCATGCCGTTTGTGTCTA---CACTCAGCCCTTCC-ATGG-TATGTACTGTGCGTACTGTGACACCTGGGTGACTTTCACTC------------TAAA--CAACTTGAGTCATGAGT-ACTACTC-AGTCTCCGCCGTAAGAACTATATTAGTGTTTGAAATGAGTTGAGCCTTTACCAGTTGGGCTCGCG----T-AGAGGCCTGTTGTCTCGTC-TGAGGTTCATGCCAAAAGGAGAGTCCTCATCT--------GAGCT------------------GTGAA-GTC--TGGATCGTTCTAC-TCCATGGCTCCCGATAGAAACAGATGATTCACGGCCGCTGTACTCATTTAA--AGGAGAGTGGA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111866156 326 + 195471971 CCCAAAACAG---------TTTCAACAAAAGGATGTTTTTCTCTG---CATG-AGTCTCTAAGGTTT-TCTATG----GATTACTGTCTCACCTGGTTCACT----ACTTAACTCAACATGAAA---TCTATCTGCCTGTGGAT-AGTA----AGT-ACCTTTGCATGAGCTGTGGCTGGGTTTGAAACTAGTTGATCTTTTGACAGTTTGGCT-TTA----G-GGAACTTAATCACCTTTACTTAAAAGTCATTGGAAAGAAAATGTTTTCTTTG--------CA-------------AACTTCTCATAAACATC--TGAAGTGTTTTTC-TCCCTGGCCCCAGATTGGAGAACA---CTCAGGACACC--ATTTCTCTTCT--GGGTGAGTA-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112336987 325 - 122678785 -TCAAGTTAGAATGAATTACTCCAGCACTTTATGATTTGTATCTA---TATCCAGCCCTT-AGGTCC-TTTGTTTTGTGCTT-----------------ACT----CCTGTACTATAGTCAAAGT--TCCTTCAGGTCATTAGC-AGTCTCTCAATCCCCTCTGTAAGTTCTGCATCTGTGTTTGAAATGAGTTGTACCTTTAACAGTTGGGCTCCCA----T-AGAGCAGGGTC------GC-AGAGGTTCATTCTGAAACAAGGGCTGTCCTCT--------GAACCCCAAAGACAGAACTTCCTGCAAATGTC--TGGACTGTCCCT--TCTGTGACCC-----AGAG------------TGGCTTCCAGCCTCCTTAATGGGAGAGAGTAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 512047 350 - 2150887 CCCTA-CTAGAATGAATTACTCCAGCAGTATATTATTTGCACCTA---TATGCAGCCCTT-AAATTG-TTCATTTTATACTTATTATTTCACCTGACTGACT----CCTGGGCTCTATGCAAAGCAGCTCTTCAGGTCTTGAGT-AGTTACGCAGTCCCCTTCGTAGG-----------TGTTTGAAACAAGTTGAACCTTTAACAATTAGGTTCACA----TAAGAGCATTATCTCCTTCAC-TGAGATTCATTCCAAAAAAGCAACCTCCTTCCACTCAAGAGACAG----------CACTTCCTGTGAACTTC--TGGACTGTCCAACTTGTGCCATCCAAGATGCCTGGAGAAGACCTATAGC-------TTCATTTATGGGAAAAAGTAGA i dasNov3.JH575754 C 0 C 0 e saiBol1.JH378121 19484298 0 - 31320352 C a score=451456.000000 s hg38.chr18_GL383571v1_alt 164314 43 + 198278 GTTGGGGGAAACGGGGAGCTGACTCCA--GAGATTCCTATCTGTT s panTro5.chr18 65074219 43 + 78221452 GTTGGGGGAAACGGGGAGCTGACTCCA--GAGATTCCTATCTGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64193236 43 + 77229886 GTTGGGGGAAACGGGGAGCTGACTCCA--GAGATTCCTATCTGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412735 43 + 17472758 GTTGGGGGAAACGGGGAGCTGACTCCA--GAGATTCCTGTCTGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139453249 43 - 152096393 GTTGGGGGAAAGGGGGAGCTGACTCCA--GAGATTCTTATCTATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402903 43 + 70235451 GTTGGGGGAGAGGGGGAGCTGACTCCA--GAGATTCCTATCTATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63094214 43 - 75711847 GTTGGGGGAGAGGGGGAGCTGACTCCA--GAGATTCCTATCTATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653493 43 - 18804593 GTTGGGGGAGAGGGGGAGCTGACTCCA--GAGATTCCTATCTATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13265365 43 + 18905526 GTTGGGGGAGAGGGGGAGCTGACTCCA--GAGATTCCTATCTATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093658 43 - 72318688 GTTGGGGGAGAGGGGGAGTTCACTCCA--GAGATTCCTATCTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430708 43 - 1517660 GTTGGGGGAGAGGGGGAGCTGACTCCA--GAGATTCCTATCTATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526810 43 + 6513552 GTTGAGGGAGAGGGGGAGCTGACTCCA--GAGGTTTCTATCTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105297411 43 + 117903854 GTTGGCGAAAAGTGGGGCCTGACTTCA--GAGACTCCTATCTATT i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1680045 43 + 2203405 GTTGGCGAAAAGTGGAGCCTGACTTAA--GAGACTCCTATCTATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632572 43 - 14941987 GTTGGCGAAAAGTGGGGCCTGACTTCA--GAGACTCCTATCTATT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1287030 43 - 1406956 GTTGAGGGAAAGAAGAGCCCGACTGCA--GACATTTCTATGTTTT i proCoq1.NW_012148742v1 C 0 I 1 s otoGar3.GL873546 11258456 40 - 20685099 ---GATGGAGAGAGAGGCCCAACTACA--GGTCTTTCTGTAGTTT i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111866482 34 + 195471971 -----------AGGAATCCTGACCTCACTGAGATTAGGCTCCATT i mm10.chr1 C 0 I 3 s canFam3.chr1 112337312 43 - 122678785 GCTCAGGGAAAGAGGAGCCCAAATGCA--GAGATTCCTGTATTTT i canFam3.chr1 C 0 I 9 s dasNov3.JH575754 512397 43 - 2150887 GCTGGGGGCAAGCGGAGCCTGACTGTA--GAGATTTCTCTATTTT i dasNov3.JH575754 C 0 I 1 e micMur3.chr19 41546798 43 + 83067054 I e saiBol1.JH378121 19484298 0 - 31320352 C a score=604003.000000 s hg38.chr18_GL383571v1_alt 164357 51 + 198278 TGCAGAGGGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTACTAGATGTA s panTro5.chr18 65074262 51 + 78221452 TGCAGAGGGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTACTAGATGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64193279 51 + 77229886 TGCAGAGGGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTACTAGATGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412778 51 + 17472758 TGCAGAGGGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTACTAGATGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139453292 51 - 152096393 TGCAGAGGGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTACTAGATGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402946 51 + 70235451 TGCAGAGGGGACC------------CTAGAATTTACGG-TTAGTAAA--CACAGCTAGTAGATGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63094257 51 - 75711847 TGCAGAGGGGACC------------CTAGAATTTACGG-TTAGTAAA--CACAGCTAGTAGATGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653536 51 - 18804593 TGCAGAGGGGACC------------CTAGAATTTACGG-TTAGTAAA--CACAGCTAGTAGATGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13265408 51 + 18905526 TGCAGAGGGGACC------------CTAGAATTTACGG-TTAGTAAA--CACAGCTAGTAGATGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093701 51 - 72318688 TGCAGAGGGGAGC------------CTAGAATTCAGGG-TTAGTAAA--CATAGCTAGTAGATGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430751 51 - 1517660 TGCAGAGGGGACC------------CTAGAATTTACGG-TTAGTAAA--CACAGCTAGTAGATGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526853 51 + 6513552 TGCAGAGGGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTGGTAGATGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105297454 51 + 117903854 TGCAGAGAGAAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTAGTATATGTA i calJac3.chr13 C 0 C 0 s cebCap1.NW_016107689v1 1680088 53 + 2203405 TGCAGAGAGGAGC------------CTAGAATTTAGGG-TTAGTAGATGTACAGCTAGTAGATGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632615 51 - 14941987 TGCAGAGAGGAGC------------CTAGAATTTAGGG-TTAGTAAA--CACAGCTAGTAGATGTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41546841 51 + 83067054 TGCAGAGCATTGA------------CTAGGAATTAGTG-TTAGTACA--CACGGTTGGTAAATATG i micMur3.chr19 I 43 C 0 s proCoq1.NW_012148742v1 1287074 50 - 1406956 TGCAGAGAAGAGA------------CTAGGGCTTGGTA-TTAGTTAA--CA-GGTTGATAAATATG i proCoq1.NW_012148742v1 I 1 C 0 s otoGar3.GL873546 11258497 48 - 20685099 TGCAGAAAGCACC------------CGAGGAATTAGTGTTTAGTAAA--TA----CAGGGAATATG i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111866519 50 + 195471971 TACAGAGAAGACC------------CAAGAAATCAGTG-TTCATAAA---ACAGGTGGTAGAAACA i mm10.chr1 I 3 C 0 s canFam3.chr1 112337364 63 - 122678785 TCCAAAAGAGAGCTTTGGAAGCTGTCTAGGAATTAGTG-TTAGTAAA--TACAGTGAGTAAATATG i canFam3.chr1 I 9 C 0 s dasNov3.JH575754 512441 59 - 2150887 TGTAGTGAGGAGCTTTGGAAACTGCCTAGAAATGAGTG-TCAGTAAA--CTCAG----TAAATATG i dasNov3.JH575754 I 1 C 0 e saiBol1.JH378121 19484298 0 - 31320352 C a score=1302698.000000 s hg38.chr18_GL383571v1_alt 164408 98 + 198278 CAGAACATTTCTCAGAACAAAGTGTG-GGGCAGGG-----TTATTTCTATGGATTCAAAGTGTCTCATGATGCGAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- s panTro5.chr18 65074313 99 + 78221452 CAGAACATTTCTCAGAACAAAGTGTGTGGGCAGGG-----TTATTTCTATGGATTCAAAGTGTCTTATGATGCGAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64193330 99 + 77229886 CAGAACATTTCTCAGAACAAAGTGTGTGGGCAGGG-----TTATTTCTATGGATTCAAAGTGTCTTATGATGCGAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412829 99 + 17472758 CAGAACATTTCTCAGAACAAAGTGTGTGGGCAGGG-----TTATTTCTGTGGATTCAAAGTGTCTCATGATGCGAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139453343 99 - 152096393 CAGAACATTTCTCAGAACAAAGTGTGTGGGCAGGG-----TTATTTCTATGGATTCAAAGTGTCTCATGATGCGAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57402997 99 + 70235451 CAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGG-----TTATTTCTATGGATCCAAAGTATATCATGATGCAAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63094308 99 - 75711847 CAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGG-----TTATTTCTATGGATCCAAAGTATATCATGATGCAAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653587 99 - 18804593 TAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGG-----TTATTTCTATGGATCCAAAGTATATCATGATGCAAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13265459 99 + 18905526 CAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGG-----TTATTTCTATGGATCCAAAGTATATCACGATGCAAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093752 99 - 72318688 CAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGA-----TTATTTCTATGGATCCAAAGTGTATCATGATGCAAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430802 99 - 1517660 CAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGG-----TTATTTCTATGGATCCAAAGTATATCATGATGCAAGGGCAAGGTGAGTCAGAGAGAAT--TAATGC---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3526904 99 + 6513552 CAGAACATTTCTCAGAACAAAGTGTGTGGGTAGGG-----TTATTTCTATGGATCCAAAGTATATTATGATGCAAGGGCAAAGTGAGTCAGAGAGAAT--TAATGC---- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105297505 99 + 117903854 CAGAATATTTTTCAGAACAAAGTGTGTGGGTAGAG-TTATTTATTTCTATGGATCCAAAGTGTCTCATGATGCGAGGACAAGGTGAGTC----AGAAT--TAACGG---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484298 99 - 31320352 CAAAATATTTCTCAAAACAAAGTGTGTGGGTAGAG-TTATTTATTTCTATGGATCCAAAGTGTCTCATGATGCCAGGGTAAGGTGAGTC----AGAAT--TAATGG---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1680141 99 + 2203405 CAGAATATTTCTCAGAACAAAGTGTGTGTGCAGAG-TTATTTATTTCTATGGATCCAAAGTGTCTCATGATGCCAGGGTAAGGTTAGTC----AGAAT--TAATGG---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632666 99 - 14941987 CAGAATATTTCTCAGAACAAAGTGTGTGGGTAGAG-TTATTTATTTCTATGGACCCAAAGTGTCTCATGATGCAAGGGCAAGGTGAGTC----AGAAT--TAATGG---- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41546892 103 + 83067054 CAGAACATTTCTCAGAGCTAAGTGTGTGGGTAGGG-CTATTTCATTCTGTAAATTCAAAGCATCTCATGATGTGAGGGCAAGGTGAGTCAGGGGGTAT--TGTGGC---- i micMur3.chr19 C 0 I 6 s proCoq1.NW_012148742v1 1287124 78 - 1406956 CAGATCATTTCTCAGAACAAA-------------------------CTGTGGATTCAAAGCATCTCATGATG-GAGGGCAAGGTGAGTCAAGAGGAGT--TATTGC---- i proCoq1.NW_012148742v1 C 0 I 35 s otoGar3.GL873546 11258545 98 - 20685099 GAGACCATTTCTGAGAACCAAATGTGTGGGTGAGG-CTATTTCATTCCTTGGATACCA--CGTCCCATGCTGGGAGGGCGAGGTGATTTAA---GTAT--TTGTGC---- i otoGar3.GL873546 C 0 I 6 s mm10.chr1 111866569 103 + 195471971 TAGACTGTTTCTTAAAAGAAAATATGTGGAGAAGA-TAAATTCATCTTGTGTTTGCATGGTGCCCAGTAATGTGAGGAACACCAGTGTCAGGAATAAT--TAGCGC---- i mm10.chr1 C 0 I 3 s canFam3.chr1 112337427 106 - 122678785 CAGACCATTTCTCAGAACAAAACATGTGGATGGGAGTTCTTTCATTCTCTAGATCCAGAGTTCTTCATGATGCTAGGGCAAAGCGAATCATGGAGAATTATAATGA---- i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 512500 106 - 2150887 CAAACCATTTCTCAGAGCAGATTCTGTGACTGGGG--TATTTTATATTGTGGCTCCAAAGTGATTCCTGACACTAGGGCCAGGTGGAGTATGGAAAAT--TATCAtgtgc i dasNov3.JH575754 C 0 C 0 a score=368617.000000 s hg38.chr18_GL383571v1_alt 164506 26 + 198278 GCGAACATCTGCCAGGCAAATATTCT s panTro5.chr18 65074412 26 + 78221452 GCGAACATCTGCCAGGCAAATATTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64193429 26 + 77229886 GCGAACATCTGCCAGGCAAATATTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412928 26 + 17472758 GCGAACATCTGCCAGGCAAATATTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139453442 26 - 152096393 GCGAACATCTGCCAGGCAAATATTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57403096 26 + 70235451 ACGAACATCTGCCAGGCAAATATTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63094407 26 - 75711847 ACGAACATCTGCCAGGCAAATATTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653686 26 - 18804593 ACGAACATCTGCCAGGCAAATATTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13265558 26 + 18905526 ACGAACATCTGCCAGACAAATATTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093851 26 - 72318688 ATGAACATCTGCCAGGCAAATATTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430901 26 - 1517660 ACGAACATCTGCCAGGCAAATATTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3527003 26 + 6513552 ATGAACATCTGCCAGGCAAATATTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105297604 26 + 117903854 ACAAACACCTGCCAAGCAAATATCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484397 26 - 31320352 ACAAACATCTGCCAAGCAAATATCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1680240 26 + 2203405 ACAAATATCTGCCAAGCAAATATCCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632765 26 - 14941987 ACAAACATCTGCCAAGCAAATATCCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41547001 26 + 83067054 ATGACTATCAGCCAGGCCAACATTTT i micMur3.chr19 I 6 I 8 s otoGar3.GL873546 11258649 26 - 20685099 ACCAACATCAGCCAGGCCAGTATTTT i otoGar3.GL873546 I 6 I 8 s mm10.chr1 111866675 26 + 195471971 AAGAACAGGTGTCAGAAAAGTTTTAT i mm10.chr1 I 3 I 8 s canFam3.chr1 112337535 26 - 122678785 TCTGACGTCTGCCAGGCCAATATCTT i canFam3.chr1 I 2 I 8 s dasNov3.JH575754 512606 26 - 2150887 acttacatctgccaggcagatatttt i dasNov3.JH575754 C 0 I 8 e proCoq1.NW_012148742v1 1287202 35 - 1406956 I a score=12982376.000000 s hg38.chr18_GL383571v1_alt 164532 783 + 198278 TCCAA-TGTTGT--T--TTCAGATTTTGAAATATCAGTATGATCATTTTCACTTTAGAGAAGAATGAAT--TCAGGTACCGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGGGCTTTCAGACTAATTCATTTTGAACAGACATCTTTGCATAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTGTCAAAAATGAAGAGAGTCTTGTTTTCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTCTCTATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCCGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCACAACCACCTATCTT---ACAACAGAAACAATGCT-TTCTAGAGTAG---------ATTCTCCAGAACAGAAG-----------------------CCTTTCTCGCGC-----------------------------------------TCctttccttc--------------------------------------------------ctttcttcc---ttc-------------------------------------------c----tc----------tctctctc--ttttatttttc---------------------------------------------------- s panTro5.chr18 65074438 783 + 78221452 TCCAA-TGTTGT--T--TTCAGATTTTGAAATATCAATATGATCATTTTCACTTTAGAGAAGAATGAAT--TCAGGTACCGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGGGCTTTCAGACTAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACG---GTGCAGTCTATTGCTCTGGGGATTTCTCTTTATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCCGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCACAACCACCTATCTT---ACAACAGAAGCAATGCT-TTCTAGAACAG---------ATTCTCCAGAACAGAAG-----------------------CCTTTCTCGCGC-----------------------------------------TCctttccttc--------------------------------------------------ctttcttcc---ttc-------------------------------------------c----tc----------tctctctc--ttttatttttc---------------------------------------------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64193455 783 + 77229886 TCCAA-TGTTGT--T--TTCAGATTTTGAAATATCAATATGATCATTTTCACTTTAGAGAAGAATGAAT--TCAGGTACCGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGGGCTTTCAGACTAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAGCTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCTTAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACG---GTGCAGTCTATTGCTCTGGGGATTTCTCTCTATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCCGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCACAACCACCTATCTT---ACAACAGAAGCAATGCT-TTCTAGAACAG---------ATTCTCCAGAACAGAAG-----------------------CCTTTCTCGTGC-----------------------------------------TCctttccttc--------------------------------------------------ctttcttcc---ttc-------------------------------------------c----tc----------tctctctc--ttttatttttc---------------------------------------------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5412954 772 + 17472758 TCCAA-TGTTGT--T--TTCAGATTTTGAAATATCAATATGATCATTTTCACTTTAGAGAAGAATGAAT--TCAGGTACCGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGGGCTTTCAGACTAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGCTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACAAGTACCAACAGCTGCTAGATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACG---GTGCAGTCTATTGCTCTGGGGATTTCTCTCTATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCCGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CTTACCCACAACCACCTATCTT---ACAACAGAAACAATGCT-TTCTAGAATAG---------ATTCTC-----CAGAAG-----------------------CCTTTCTCACGC-----------------------------------------TCctttcctt---------------------------------------------------ctttcttcc---ttc-------------------------------------------c----tc----------tctc-------tttatttttc---------------------------------------------------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139453468 790 - 152096393 TCCAA-TATTGT--T--TTCAGATTTTGAAATATCAATATGATCATTTTCACTTTAGAGAAGAATGAAT--TCAGGTACCGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTACTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGGGCTTTCAGACTAATTCATTTTGAACAGACAT-TTTTCATAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATTAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATTCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACG---GTGCAGTCTATTGCTCTGGGGATTTCTGTATATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCCGTGATTTCAAAGTAC-TCATGAAAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCACAACCACCTATCTT---ACAACAGAAACAATGCT-TTCTAGAATAG---------ATTCTCTAGAACAGAAT-----------------------Cctttctcgcac-----------------------------------------tcctttccttc--------------------------------------------------ctttcttcc---ttcctt-----------------------------------tctctc----tc----------tctctctc--tTTTATTTTTC---------------------------------------------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57403122 787 + 70235451 TCCAA-TATTGT--T--TTCAGATTTTGAAATAtcaatatgatcattttcactttacagaagaatgaat--tcaggtacagaCATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATATGAATGCATT------AAAATAAAACAAGAGCCACAGCTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTGCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACACGTACCAACAGCTGCTAAATTCAGAATCCTAGAGCAGTATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTTCTATATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACCACAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------CCTTTCTCGTGC-----------------------------------------TCCTTCCCCTC--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tc----------tctctctc--ttttttttttt---------------------------------------------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63094433 787 - 75711847 TCCAA-TATTGT--T--TTCAGATTTTGAAATATCAATATGATCATTTTCACTTTACAGAAGAATGAAT--TCAGGTACAGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAGACATCTTTTCATAGTGGTGAAATATGAATGCATT------AAAATAAAACAAGAGCCACAGCTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTGCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACACGTACCAACAGCTGCTAAATTCAGAATCCTAGAGCAGTATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTTCTATATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACAACAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------Cctttctcgtgc-----------------------------------------tccttcccctc--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tc----------tctctctt--ttttttttttt---------------------------------------------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13653712 787 - 18804593 TCCAA-TATTGT--T--TTCAGATTTTGAAATAtcaatatgatcattttcactttacagaagaatgaat--tcaggtacagaCATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAAACATCTTTTCATAGTGGTAAAATATGAATGCATT------AAAATAAAACAAGAGCCACAGCTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTGCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACACGTACCAACAGCTGCTAAATTCAGAATCCTAGAGCAGTATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTTCTATATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACAACAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------Cctttctcgtgc-----------------------------------------tccttcccctc--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tc----------tctctctt--ttttttttttt---------------------------------------------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13265584 787 + 18905526 TCCAA-TATTGT--T--TTCAGATTTTGAAATAtcaatatgatcattttcactttacagaagaatgaat--tcaggtacagaCATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATATGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGTGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACACGTACCAACAGCTGCTAAATTCAGAATCCTAGAGCAGCATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTTCTATATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACAACAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------CCTTTCTCGTGC-----------------------------------------TCCTTCCCCTC--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tc----------tctctctc--ttttttttttt---------------------------------------------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60093877 787 - 72318688 TCCAA-TATTGT--T--TTCAGATTTTGAAATATCAATATGATCATTTTCACTTTACAGAAGAATGAAT--TCAGGTACAGACATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATATGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCTGACCATAGAAGGGATGCGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTTCTATATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACAAGAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------CCTTTCTCGTGC-----------------------------------------tccttcccttc--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tc----------tctctctc--tctctctctTT---------------------------------------------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 430927 789 - 1517660 TCCAA-TATTGT--T--TTCAGATTTTGAAATAtcaatatgatcattttcactttacagaagaatgaat--tcaggtacagaCATTGTGGCCTTTCAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATATGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAACTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTATTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTAAATTATAAATAATGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGCATCTCATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTTCTATATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACAACAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------CCTTTCTCGTGC-----------------------------------------tccttcccctc--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tC----------TCTCTCTCttttttttttttt---------------------------------------------------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3527029 783 + 6513552 TCCAA-TATTGT--T--TACAGATTTTGAAATAtcaatatgatcattttcactttacagaagaatgaat--tcaggtacagaCATTGTGGCCTTTGAGCTCTGCCCC-----ATGCATCTGTGCTGAAGTAGTGGGGATGTAGCTAGCCTCCCAGTGTTCTCAGATGAACTTTCAGACAAATTCATTTTGAACAGACATCTTTTCATAGTGGTAAAATATGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAAAGCATCCGACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAACA---GTGCAGTCTATTGCTCTGGGGATTTCTTACTGTATAAAAGGATCTTAAATCTACATGAGGTTTT-ACTCCGTGATTTCAAAGTAC-TTATGAGAATCTGTTTTCTTTATTTGCCTATCTTTCAA-CCTACCCGCAACCACCTATCTT---ACAACAGAAACAGTGCT-TTCTAGAACAG---------ATTCTCCAGAATAGAAG-----------------------CCTTTCTCGTGt-----------------------------------------tccttcccttc--------------------------------------------------ctttcttcc---ttcctt-----------------------------------t----c----tC----------TCTC------TTTTTTTTTTT---------------------------------------------------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105297630 773 + 117903854 TCTAA-TATTGT--T--TTCAGATCTTGAAATACCAATATGACCATTTTCACTTTTCAGATGAATGAAT--TCAGGTACAGACATTGCGGCTTTTGAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGAGCTCTCAGGCTAATTTATTTCGAACAGACATCTTTTCATAGTGGCAAAATGTGAATGAATT------AAAATAAAACAAGAGCCACAACTGAACAATTGAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACATGTGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCAACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACGTGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCACTATCTTATTTTAATGTAAGTGAAGAACG---GTACAGTCTATTGCTCTGGGGATTTCTCTATATATAAAAGGATCTTAAATCTACATGAGATTTTAACTTTGTGATTTCAAAGTAC--TGTGAAAATCTGTTTTCTTTATTTGCATATCTATCAA-TCTACCCACAGCCACCTATCTT---ACAACAGAAAAAATGCT-ATGTACAATAG---------A-TCTTCAAAGCAGAAG-----------------------CCTTTCTCACGc-----------------------------------------ttcttcccttc--------------------------------------------------ctttcttcc---ttt-------------------------------------------c-----t----------cttctctc----------ttt---------------------------------------------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19484423 780 - 31320352 TCTAA-TATTGT--T--TTCAGATCATGAAATACCAATATGACCATTTTCACTTTTCAGATGAATGAAT--TCAGGTACAGGCATTGTGGCCTTTGAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGAGCTTTCAGGCTAATTCATCTTGAACAGACATCTTTTCATAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAACGGATAGCTCCAATTATTGCTCCTTCCACACGTGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCAACCATAGAAGGGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAAAATCCTGAAGCAGTATCTTATTTTAATGTAAGTGAAGAACG---GTACAGTCTTTTGCTCTGGGGATTTCTGTCTATATAAAAGGATCTTAAATCTACATGAAATTTTAACTTTGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATTTGCATATCTATCAA-TCTACCCACAGCCACCTATCTT---ACAACAGAAACAATGCT-ATCTAGAATAG---------ATTCTTCAAAGCAAAAG-----------------------CCTTTCTCACGc-----------------------------------------tcctttccttc--------------------------------------------------cttccttcc---ttc-------------------------------------------cttcctt----------tctCTCTC----------ttt---------------------------------------------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1680266 775 + 2203405 TCTAA-TATTGT--T--TTCAGATCATGAAATACCAATATGACCATTTTCACTTTTCAGTTGAATGAAT--TCAGGTACAGACATTGTGGCCTTTGAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCA-CCAGCCTTCCAGCATTCTCAGAAGAACTTTCAGGCTAATTCATTTTGAACAGACATCTTTTCATAGTGGCAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCATTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGCTCCTTCCACACGTGAAGATGGTACAAAGTTACTTAATTATAAATAATGCATCCAACCATAGAAGGGATGAGCTATGTGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAATG---GTACAGTCTATTGCTCTGGGGATTTCTGTCTATATAAAAGGATCTTAAATCTACATGAGATTTTAACTTTGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATCTGCATATGTATCAA-TCTACCCACAGCCACCTGTCTT---ACAACAGAAACAATGCT-ATGTAGAATAG---------AGTCTTCAAAGCAGAAA-----------------------CCTTTCTCACAC-----------------------------------------tccttcccttc--------------------------------------------------ctttcttcc---ttc-------------------------------------------c----tt----------tctCTCTC----------TTT---------------------------------------------------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3632791 776 - 14941987 TCTAA-TGTTGT--T--TTCAGATCTTGAAATACCAATATGACCATTTTCACTTTTCAGATGAATGAAT--TCAGGTACAGACATTGTGGCCTTTGAGCTCTGCCCC-----ATGCATCTGTGCTGAAGCAGTGGGGATGCAGCTAGCCTCCCAGCATTCTCAGATGAGCTTTCAGGCTAATTCATTTTGAACAGACATCTTTTCTTAGTGGTAAAATGTGAATGCATT------AAAATAAAACAAGAGCCACAACTGAACAATTCAAATCACTGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTACTCCTTCCACACGTGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCAACCATAGAAGGGATGAGCTATATGCTATGTTACTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTAAGTGAAGAATG---GTACAGTCTATTGCTCTGGGGATTTCTCTCTATATAAAAGGATCTTAAATCTACATGAGATTTTAACTTTGTGATTTCAAAGTAC-TTATGAAAATCTGTTTTCTTTATTTGCATATCTATCAA-TCTACCCACAGCCACCTATCTT---AAAACAGAAACAATGCT-ATGTAGAATAG---------ATTCTTCAAAGCAGAAG-----------------------CCATTCTCATGC-----------------------------------------tccttcccttc--------------------------------------------------ctttcttcc---ttc-------------------------------------------c----tt----------tctCTCTC----------TTT---------------------------------------------------- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41547035 785 + 83067054 TCCTA-CATTTT--T--TTCAGATTTTTAAATATCAATATGATCATTTTCACTTCATAGATTAATGAAC--TCAGATACAGATGTTGCCTCCTTTCACTTCTGCCCC-----ATACGTCGGTACTGAAGCTCCAGGGAAGCAGCTAGCCTCTCAGCATTCTCAGATGAGCTTTCAGGATAATTCATTTTGAACAGGCATCTTCTCACAGTGGAGAAATGTGAGTGCATT------AAAATAAAACAGGGGCTACAACTGAACAATTCAAATCATTGGCAGAAAGGGTAGTAGGTAAATGGCACCATTAAAAATGAAGATAATCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCAATTACTGTTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCAACCATAGAAGGGATAAGCTATATGCTATGTTATTGTACATTCAAAATCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATGTGAGTGAAGAACA---GTTCAGTCTATTGCTCTGGGGATTTCCCTCTATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCAGTGATATCAAAGCAC-TTATGAATATGTGTTTTCTTTATTTGCATATCTTTCAA-CCTGCCC-CGACCACCCAACTT---ATAACAGAAACAATGCTATTATAGAACAG---------ATTCTTCAGAGCAGAAG-----------------------Cctttctctctc----------------------------------------------ctcctc--------------------------------------------------tttctttccactgttcct-----------------------------------t----c----ct----------tttctttc--ttttttttttc---------------------------------------------------- i micMur3.chr19 I 8 I 17 s proCoq1.NW_012148742v1 1287237 800 - 1406956 TTCTA-TATTTT--T--TTCATATTTTTTAACAtcaatatgatcattttcactttacagattagtgaac--tcaggtacagaTGTTGCCTCCTTTCACTTCTGCTCC-----ATGCATCGGTACTGAAGCTCCGGGGAAGCAGCTAGCCTCTCAGCATTCTCAAATGAGCTTTCAGGCTAATTCGTTTTGAACAGGCATCTTCTCACAGTGGAGAAATGTGAGTGCATT------AAAATAAAACAGGAGCTACAACTGAACAATTCAAATCGTTGGCAGAAAGGGT-GTAGGTAAATGGCACTATTAAAAATGAAGATAATCTTATTTCCTGTGAACTAAAAATGGATAGCTCCAATTATTGTTCCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCAACCATAGAAGCGATGAGCTATATGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATGTACCAACAGCTGCTAAATTCAGAATCCTGGGGCAGTATCTTATTTTAATGTGAGTGAAGAATA---GTTCAGTCTATTGCTCTGGGGATTTCCCTCTATATAAAAGGATCTTAAATCTACATGAGATTTT-ACTCAGTGATATCAAAGCACTTTATGAATATCTGTTTTCTTTATTTGCATATCTTTCAA-CCTGCCC-CAGCCACCCAACTT---GTAACAGCAACAATGCTATTATAGAACAG---------ATTCTTCAGAGAAGAAG-----------------------cctttctctctc-----------------------------------------tccttcccctc--------------------------------------------------cttctttccactcttcct-----------------------------------t----c----cttttctttctctttctttc--ttttttttttc---------------------------------------------------- i proCoq1.NW_012148742v1 I 35 I 2 s otoGar3.GL873546 11258683 768 - 20685099 GCCTA-TAAT-------------TATTTTAACATCAGTGTGatcattttcactttacagatgaatgaat--tcaggtacagaTGTG---TCTTTTCCTTTCTGCCTC-----ATGGGTCTACACCAAAGCTCTGGGGAAGCAGCT--CCCCTCGGCACTCTCAGAGGAGCTTTGGGGCTAATTCATTGTGAACAGGCATCTTTTCACAGTGGAGAAATGTGAGTGCATT------AAAATAAAACAGGAGCTACAACCGAACAATTCAAATCATCGGCAGAAAGGGTGGTAGGTAAATGGCACTATTAAAAATGAAGATAGTCTTGTTTCCTGTGAACTAAAAATGGATAGTTCCAATTATTGTTCCTTCTACCCATGAAGATGGTACGAAGTTAGCTAATTATAAATAATGCATCCAGCCATAGAAGGGATGAGCTATCTGCTATGTTATTGTACATTAAAAACCTTTATGAGTGTGGCAAGAGACACATATACC-ACAGCTGCTAAATTCAGAATCCTGAAGCAGTATCTTATTTTAATGCAAGTGGAGAACA---GTTTGGTCTATTGCTCTGGGGATTTCCCTCTATATAAAAGGATCTTAAATCTACATGAAATTTT-ACTCAGTGATATCAAAGCCC-TTATGAATATCTATTTTCCTTATATGCA-ATCTTTCAA-CCTGCTC-CAACCACCCAACTT---GTAACAGAAACAATGGT-TTCTAGTATAG---------ATTCTCCAGAGCAGATG-----------------------CCTCTCTCTTTC----------------------------------------------TCCCTC--------------------------------------------------CCTAATCCCACCTTCCCG-----------------------------------T----C----TT----------TTCCTTCC--TTTCTTCTTCC---------------------------------------------------- i otoGar3.GL873546 I 8 I 11 s mm10.chr1 111866709 919 + 195471971 TCCAATTATTGTACT--TTCTAATTTATTGTTATTAGTATGACCATTTTTACTTGACTGTTAACAGAATCCTCAGG-AGAGGGACTGAGGTCTTTTTATTTCTCACCAATATACATACCTGAAAATAAGCTGTGGGGATGCAAATAAGTCCTCCTCATGGTAGGATGAGGTATCTGGATAACTCATTTTGAACAGGAATCTTCTCAATGTTCTTACATATGAGTGTTTT------GAAATAAAACAGA---------TGAATGATCCAAATCACTGGCATAAAAGATGATAGGTAAATGGCACTATTAAAAATTAAGA--GTCTTGTTTCCTGTGAATTAAAAATGGATAACTCCAATTAT---TCCTTCCACACATGAAGATGCTATAAAGTTAGTTAATTATAAATAATGCATTCAACCATAGAAGAGATGAGCTTTAGTCTATTTTATTGTAT-TTAAAAGCCTTTATGAGTGTGGCAAGAGACACATATACCAACAGCTGTTCAATTCAGAATGCTAGAACAGTATCTTATTTTAATGAAAATAAAGAACA---GTATATATTTTTGCTCTGTGGATTCCTTTCTATATAAAAGGATCTTAAATCTGCATGAGATTTT-ATGCTGTGATAAGGAAATAC-TTATGAAAATCCATTTTCTTTATTTGTGTATCTTTCAA-CCAACTGTCACGTACTCTACTTAAAATAATAGAGACAGTATT-TTCTAGACTGATGCCCTGCCATCATCCTGTTCTGAAT-----------------------TTGTTCTTTTTCATTTTGTTCTCCCTATGACTcttcttctatttgttccttcattcttcccttcttttcattggtttccctgtctccatccctctttctaaccttccattttgtctttcctcc---ttcactctgtcccttcctcctttctttcatccatatccttat----c----tc----------tgttcctc--ttttctatttt---------------------------------------------------- i mm10.chr1 I 8 I 2 s canFam3.chr1 112337569 824 - 122678785 TCCAA-TGTTTC--T--TTCAGATTTATCCTCATCAGTATGATCA-TTTCATTTTACCTATGAACGAA---TCAGGTACAGACATGGTGGTCTTTCAATTTTACCCC-----ATGCACCTGCACTGAAGCA----AGATACACCTAACTTCTCAGTATTTTCAGGTTAGCTTTCAGGCTAATTCACTTTGAACAGGCATCATCCCTCAGT-------TGTGAGTGTGTT------GAAAT-AAATAAGAACTATAGCTAAACAATTCAGATCATTGGCAGAAAGGGTGGTAGGTAAATTGCACTATGAAAAATAAATAGAGTCTTGTTTCCTGTGAACTAAAAATGGATAGCTCCTATTATTGCTTCTTCCACACATGAAGATGGTACAAAGTTAGTTAATTATAAATAATGCATCCAACCATAGAAGGGATGAGCTATATGTTACTTTATTGCACATTAAAAATCTTTATGAGTGTGGCAAGAGACACATATGCCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTTATTTTAATATAAGTGGAGAATA---GTACAGTCTATCACTCCGGGAATTTCCCACTATATAAAATGTTCTTAAATCTACATGAGCTTTT-GCTT-GTGATTTCAAAGAAT-TTATGAAAATTTGTTTTCTTTATTTGAATATCTTCCAGCCCTATCCCCAGCCACCCTACTT---AGAAAGGAGATGATGCT-TTCTGGACTAG---------ATTCCCAAAGGTAGGAGCTGCCTGCCTGtctttcttctttccttcctttcct-----------------------------------------tcctttccttt----------------------ccttttcttttcttttctttctttctttctttctttc---tttctt-----------------------------------t----c----tt----------tctttctt--tctttcttttc---------------------------------------------------- i canFam3.chr1 I 8 C 0 s dasNov3.JH575754 512640 879 - 2150887 tccaa-tcacat--ttgttcaaatttatgaacagcaatatgatcattttcactttacagatgactgaat--tcaggtacagaCGTTGTGACCTTTCAGTTCTGCCCC-----ATTCACCTG-----AAGGTGTGGGAAAGCAGCTCACCTCTCAGCGTTCTAGGATGAGCTTTCAGGCTAATTCATTGTGAACACTCATCTTTTC--AGATGTGAATTGTGAGTGCATTGGGAAAAAAAAAAAACAGGAGCTAGAGCTGAGAAATCCAAATCATTGGCAGAAAGGGTGGAAGGTAAATAGCACTATGAAAAATAAAGA--GTCTTCTTTCCCA-GTACTAAAAATGGATAGCTCCAATTACTGCACCTTCCACAGATGAAGATAGTACAAAGTTAGCTGATCATAAATAATGCATCCAGCCATAGAAGGGGTGATCTACATGCTATGTTACTGTACATTAAAAACCTTTATGAGTATGGCAAGAGACACATATACCAACAGCTGCTAAATTCAGAATCCTGGAGCAGTATCTCATTTTAATGTAAGCGAAGAACAACCATACAGTCTTT--CTCTGGGGATCTCACTCTATATAAAAAGATTTTAAATCTATATGAGGTTTT-ATTCAGTGATTTCAAAGCAT-TTATAAGAATCTATCTTCTTTATTTCCATGTATTTCAACCCTCCTCCTTCCCACCCCACTT---ACAACAGAGATAATGCT-TTCCAGACTAG---------ATTCCTGGGGCAGGAGT-----------------------Cctttctctttt-tcttttttcccttccttcttttcattt-------------ttccttccttc--------------------------------------------------ttttcctct---ttctttttctttctctgtt----------------------t----c----tt----------tctctctc--cctctctttccctccatcccactctccctctcatcctctctccctctcctctctgcctTTttt i dasNov3.JH575754 I 8 C 0 a score=-10337.000000 s hg38.chr18_GL383571v1_alt 165315 17 + 198278 tt----------------------------------------------tT--AAAATTTTATTTC- s panTro5.chr18 65075221 17 + 78221452 tt----------------------------------------------tT--AAAATTTTATttc- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64194238 17 + 77229886 tt----------------------------------------------tT--AAAATTTTATTTC- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5413726 17 + 17472758 tt----------------------------------------------tT--AAAATTTTATTTC- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139454258 17 - 152096393 TT----------------------------------------------TT--AAAATTTTATttc- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57403909 30 + 70235451 tt------------------ttaattcttcttt---------------tt--AAAATTTTACTTA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63095220 30 - 75711847 tt------------------taaattcttcttt---------------tt--AAAATTTTACTTA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13654499 28 - 18804593 tt--------------------aattcttcttt---------------tt--AAAATTTTACTTA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13266371 35 + 18905526 ttctt-------------ttttaattcttcttt---------------tt--AAAATTTTACTTA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60094664 31 - 72318688 TT-----------------TTTAATTCTTCTTT---------------TT--AAAATTTTACTTA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 431716 31 - 1517660 tt-----------------tttaattcttcttt---------------tt--AAAATTTTACTTA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3527812 30 + 6513552 TT------------------TTAAATCTTCTTT---------------TT--AAAATTTTACTTG- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105298403 17 + 117903854 tt----------------------------------------------tt--AAAATTTTATTTC- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19485203 19 - 31320352 tt----------------------------------------------ttaaaaaattttatttC- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1681041 16 + 2203405 TT----------------------------------------------T---AAAATTTTATTTC- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3633567 17 - 14941987 TT----------------------------------------------TT--TAAATTTTATTTC- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1288039 18 - 1406956 -----------------------------tttG---------------AA--AAAATTTTCGTT-- i proCoq1.NW_012148742v1 I 2 C 0 s otoGar3.GL873546 11259462 26 - 20685099 -----------------------------TTTGTTACTGTAAAAAAAAAA--AAAAT--------- i otoGar3.GL873546 I 11 C 0 s mm10.chr1 111867630 10 + 195471971 -------------------------------------------------------ttcttccctt- i mm10.chr1 I 2 I 2 s canFam3.chr1 112338393 45 - 122678785 --tttctttctttctttctttctttccttcttt---------------ct--ttttttTTATTC-- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 513519 17 - 2150887 --------------------------------t---------------tt--ttccttttaattcc i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41547820 17 + 83067054 I a score=3517616.000000 s hg38.chr18_GL383571v1_alt 165332 238 + 198278 T-CAACATCTATCCCAGAGCCTGGCACTTT--------T-TGAAAAATGTTT--GGTGAATGTTTAAC-----ATGAATTATCGCCCCCATTTTATGACAGAAGA-GAAAAAGTCATAAAGGTCTAAAGTGGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAGACTG s panTro5.chr18 65075238 238 + 78221452 t-caacatctatcccagggcctggcacttt--------t-tgaaaaatgttt--ggtgaatgTTTAAC-----ATGAATTATCGCCCCCATTTTATGACAGAAGA-GAAAAAGTCATAAAGGTCTAAAGTGGGTTACGACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAGACTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64194255 238 + 77229886 T-CAACATCTATCCCAGAGCCTGGCACTTT--------T-TGAAAAATGTTT--GGTGAATGTTTAAC-----ATGAATTATCGCCCCTATTTTATGACAGAAGA-GAAAAAGTCATAAAGGTCTAAAGTGGGTTGCGACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAGACTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5413743 237 + 17472758 T-CAACATCTATCCCAGAGCCTGGCAC-TT--------T-TGAAAAATGTTT--GGTGAATGTTTAAC-----ATGAATTATCGCCCCCATTTTATGACAGAAGA-GAAAAAGTCATAAAGGTCTAAAGTGGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAGACTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139454275 238 - 152096393 t-caacatctatcccagagcctggcacttt--------t-aaaaaaatgttt--ggtgaatgTTTAAC-----ACGAATTATCGCCCCCATTTTATGAGAGAAGA-GAAAAAGTCATAAAGGTCTAAAGTGGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAGACTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57403939 239 + 70235451 Tccaacatctatcccagagcctggcacttt--------t-tattaaatgttt--ggtgaatgTTAAAC-----ATGAATTATCGTCCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAGGTCTAAAGTAGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAGTTCAAGTGAAACATGAAACTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63095250 239 - 75711847 TCCAACATCTATCCCAGAGCCTGGCACTTT--------T-TATTAAATGTTT--GGTGAATGTTAAAC-----ATGAATTATCGTCCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAGGTCTAAAGTAGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAGTTCAAGTGAAACATGAAACTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13654527 239 - 18804593 Tccaacatctatcccagagcctggcacttt--------t-tattaaatgttt--ggtgaatgTTAAAC-----ATGAATTATCGTCCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAGGTCTAAAGTAGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAGTTCAAGTGAAACATGAAACTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13266406 239 + 18905526 Tccaacatctatgccagagcctggcacttt--------t-tattaaatgttt--ggtgaatgTTAAAC-----ATGAATTATCGTCCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAGGTCTAAAGTAGGTTACTACATTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAGTTCAAGTGAAACATGAAACTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60094695 235 - 72318688 TCCAACATCTATTCCAGAGCCTGGCACTTT--------T-TATTAAATGTTT--GGTGAATGTTAAAC-----ATGAATTATCGTTCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAGGTCTAAAGTAGGTTACTTCATTCTAAGCAGAGTCACACA--C----TCTCTTGACTGTGCTGAGAAGCTTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAGTTCAAGTGAAACATGAAACTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 431747 239 - 1517660 Tccaacatctatcccagagcctggcacttt--------t-tattaaatgttt--ggtgaatgTTAAAC-----ATGAATTATCGTCCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAAGTCTAAAGTAGGTTACTACATTCTAAGCAGAGTCATACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAGTTCAAGTGAAACATGAAACTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3527842 239 + 6513552 Tccaacatctatcccagagcctggcacttt--------t-tattaaatgttt--ggtgaatgTTAAAC-----ATGAATTATCGTCCCCATTTTATGACAGAAGA-GAAAAAGTCATGAAGGTCTAAAGTAGGTTACTACATTCTAAGCCGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCGCACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTGGTTCAAGTGAAACATGAAACTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105298420 238 + 117903854 T-CAACATCTATCCCAGAGGCTGGCACTTT--------T-TATTGAATGTGTGTGGTGAATGTTAAAC-----ATGAATTATCACCCCTATTTTATAACAGAAGA-GAAAAAGGCATAAAGGTCTAAAGTGGG--ACTACCTTCTAAGCAGAGTCACACA--CTCTTTCTCTTGACTGTGCTGAGAAGCTTTTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAAACTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19485222 245 - 31320352 T-CATCATCTATCCCAGAGCCTGGCACTTT--------T-TATTGAATGTGTGTAATGAATGTTAAACATGAAATGAATTATCACTCCCATTTTATAACAGAAGA-GAAAAAGGCATAAAGGTCTAACGTGGGTTACTACCTTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCCTACCACAAAACCCGTAATTGGAGCTATGCCTTG-AGGTGATTTAATTCAAGTGAAACATGAAACTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1681057 240 + 2203405 T-CAATGTCTATCCCAGAGCCTGGCACTTT--------T-TATTGAATGTGTGGGGTGAATGTTAAAC-----ATGAATTATCACCCCCATTTTATAAGAGAAGA-GAGAAAGGCATAAAGGTCTAAAGTGGGTTACTGCCTTCTAAGCAGAGTCACACA--CTCTTTCTCCTGACTGTGCTGAGAAGCCTCTTACCACACAACCCATAATTGCAGCTATGTCTTG-ATGCGACTTAATTCAAGTGAAACATGAAACTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3633584 240 - 14941987 T-CAACATCTATCCCAGAGCCTGGCACTTT--------T-TATTGAATGTGTATGGTGAATGTTAAAC-----ATGAattatcacccccattttataacagaaga-gaaaaaggcataaaggtctaaagtgggttacTACCTTCTAAGCAGAGTCACACA--CTCTTTCTCCTGCCGGTGCTGAGAGGCCTCTTACCACACAACCCATAATTGGAGCTATGCCTTG-AGGTGACTTAATTCAAGTGAAACATGAAACTG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41547837 239 + 83067054 -TCATAATCTATCCCAGAGCCTGGCATTTT--------TGTGTTGAATATAT--GTTGAATGCTTAAC-----ATGAATGATCACCCCCATTTTATGGCAGAAGA-GAAAAAGGCATAAAGGTCTAAAGTGGGTTATCAAATTCTGAACAGAGTTACACA--CTTTTCCTCTCAACTGTGCTTTGAATCTCATTACCACACAACCCATAATTGAAACTATGTTTTG-AGGTGACTTAATTAAATTGACAGCTGAGATTG i micMur3.chr19 I 17 C 0 s proCoq1.NW_012148742v1 1288057 236 - 1406956 ------ATCTATCCCAGAGCCTGGCATTTT--------TGTATTGAATATAT--GTTGAATGCTTAAC-----ATGAATTATCACCCCCATTTTATGGCAGAAGA-GAAAAAGATATAAAGGTCTAAAGTGGGTTCTCAAATTCTGAACAGAGTTACACACTCTTTTCCTCTCAACTGGGCTTTGAAGCTTGTTACCGCACAATCCATAATTGGAACTATGTCTTG-AGGTTACTTAATTCAAGTGACACCTGAGACTG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11259488 232 - 20685099 -TCATTATCTCTCCCAGAGCCTGGCATTTC--------T-TATTGAACATAT--GTTGAATTATTAAC-----ATGAATCATCACCCCCA--TTATGACAGAAGA-GAAAAAGTTATAAAGTTCTAATATAGGTCCTCAAATTCTGAACAAAGTTAAACATGCTTTTTCTC-CACCT--TCTTTGAAGCTTGTTA---CATAACTTATAATTGAAACTATGTCTTG-AGGTGACTTAATTCAAATAAAACCTGAGACTG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111867642 219 + 195471971 -ttGATGTATTTCCCAGAAC----CACTTT--------G-GAATGAACAA----GGTGACAATTGAGC-----ACATATCACTA-CACCATTTCATGGTAGAAGA-GAGAACAGTGTAAAAGTCTACTGTGAGTAGCTAAATTC-----------AGAAA--CTCTTTTTTCATA-GGTGTTGTGACATTTGTTTCTGCATAACCTATCGTTGGGTATTTATCTTGAAGGTAACTCAATGT-GGTGATATgtaagattg i mm10.chr1 I 2 I 174 s canFam3.chr1 112338438 236 - 122678785 -TCATCACCTAACCCAGAGCCCAGCACTTT--------G-TCTTGAGGGTGT--GTAGAATGTTGAAC-----ATGAATTATCACCCTCATTTTATGGCAGAAGAGGAAAAAGTCATAAATGTCTAAAGTAGGTTGCTGAGTTCTGAGCAGAATCAGAAA--CACTTTCTCC-AACTGTGCTGAGAAGCTTGTTACCGCACAATCAGTAGTTGGAACTTT--CTGG-GGGTGACTTAATTCAAATGAAAACTAAGACTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 513536 240 - 2150887 -tcagcacctagcacaaagcctggcatgttgtctatgct-cagtaaaagtgt--gctgCACTTTGAAC-----ATGAATAATAATGCCCATTTCTGAGCAAAAGA-GAAAAAGCCATAAAGACCTAAAGTAGATTTCTGAGTTCCAAGCAGATTCTGAAA--ATTTTACTCCTAACTGTTCTGAGAAGCTTGTTACCACAGAACCCATAGCTGGAGCTATTTC-AG-GGGTGACTTGATTCAAGT-----CTAAGACTT i dasNov3.JH575754 C 0 C 0 a score=13941344.000000 s hg38.chr18_GL383571v1_alt 165570 938 + 198278 GAAAGTCATACAACATTTTCAAGAGGATTTCTGCATTAATTGTATATGTTAAGATAGGCAAATT-CAAGCTCTGAGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CCT-------ATGCACAGGTCTCCAATACCTGGGCTTTCAAGCAGCATAGCCATTTGAATATGGAGACGGCTTTGTTATTCTTCTCATAGCATAATCCACCTTTGCTACAGCTTTGGCCGTGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAGTATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCATCTGTAACTGTTTAGAAACAGACACCAAACTTAAGCTGCAAATTTTATTGCCCAGTTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAGTTTAAAGCAGGCAGTAGAGTCTGGAAATAC---------------TTTTTTTTTTTCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTAAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAAGTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGGAAAAAGTTTCCCCATAAGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAAAAATTTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGTTTTCTCCAGGGCTCTTCC s panTro5.chr18 65075476 938 + 78221452 GAAAGTCATACAACATTTTCAAGAGGATTTCTGCATTAATTGTATATGTTAAGATAGGCAAATT-CAAGCTCTGAGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CCT-------ATGCACAGGTCTCCAATACCTGGGCTTTCACGCAGCATAGCCATTTGAATATGGAGACGGCTTTGTTATTCTTCTCATAGCATAACCCATCTTTGCTACAGCTTTGGCCGTGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAGTATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCATCTGTAACTGTTTAGAAACAGACACCAAACTTAAGCTGCAAATTTTATTGCCCAGTTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATAC---------------TTTTTTTTTTTCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGGAAAAAGTTTCCCCATAAGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTACCTTTTGATATGAAAGAAAAATTTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGGTTTCTCCAGGGCTCTTCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64194493 938 + 77229886 GAAAGTCATACAACATTTTCAAGAGGATTTCTGCATTAATTGTATATGTTAAGATAGGCAAATT-CAAGCTCTGAGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAGCTAGTTGCTGTGCATTCAGC-AACT-CCT-------ATGCACAGGTCTCCAATACCTGGGCTTTCACGCAGCATAGCCATTTGAATATGGAGACGGCTTTGTTATTCTTCTCATAGCATAACCCATCTTTGCTACAGCTTTGGCCGTGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAGTATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCATCTGTAACTGTTTAGAAACAGACACCAAACTTAAGCTGCAAATTTTATTGCCCAGTTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATAC---------------TTTTTTTTTTTCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGGAAAAAGTTTCCCCATAAGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTACCTTTTGATATGAAAGAAAAATTTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGGTTTCTCCAGGGCTCTTCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5413980 942 + 17472758 GAAAGTCATACAACATTTTCAAGAGGATTTCTGCATTAATTGTATATGTTAAGATAGGCAAATT-CAAGCTCTGAGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACGCTACATAAAATCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CCT-------ATGCACAGGTCTCCAATACCTGGGCTTTCACGCAGCATAGCCATTTGAATATGGAGACGGCTTTGTTATTCTTCTCATAGCATAACCCATCTTTGCTACAGCTTTGGCCATGAAAGCTCAGAGGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAGTATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCATCTGTAACTGTTTAGAAACAGACACCAAACTTAAGCTGCAAATTTTATTGCCCAGTTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACTT-----------TTTTTTTTTTTTTCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTATTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGGAAAAAGTTTCCCCATAGGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGGAAGAAAAATTTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGGTTTCTCCAGGGCTCTTCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139454513 942 - 152096393 GAAAGTCATACAACATTTTCAAGCGAATTTCTGCATTAATTGTGTATGTTAAGATAGGCAAATT-CAAGCTCTGAGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-TAT-------ATGCACAGGTCTCCAATACCTGGGCTTTCACGCAGCATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTTCTCATAGCATAACCTGTCTTTGCTACAGCTTTGGCCGTGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCATCTGTGACTGTTTAGAAACAGACACCAAACTTAAGCTGCAAATTTTATTGCCCAATTTGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCGGTAGAGTCTGGAAATACTC-----------TTTTTTTTTTTTTTCACAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGCATGACAGTAACTAGATTTATTAAAACTTAAAAATAGCAAAGCCAAATTCTGGGGGAAAAAGTTTCCCCATAAGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTCAGCTTTTGATATGAAAGAAAAATTTAAACAAAGTAAAACTTGCAAAGGGATCGTAAGATGGTTTCTCCAGGGCTCTTCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57404178 950 + 70235451 GAAAGTCAT---ACATTTTCAAGAGAATTTCTGCATTAATTGTGTATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CAT-------ATGCGCAGGTCTCCAATACCTGGGCTTTCACGCAGTATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTTCTCATGGCATAACCCTTCTTTGCTATGGCTTTGGCCGTGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATCGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAAGTTAAGCTGCGAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGCCttttttttttttttttttttCCCCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCGGGGGAAAAAAGTTTCCCCATAAGTCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAACATTTTAAACAAAGTAAAACTTGCAGAGGGATCATACGATGGTTTCTCCAGGGCTCTTCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63095489 950 - 75711847 GAAAGTCAT---ACATTTTCAAGAGAATTTCTGCATTAATTGTGTATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CAT-------ATGCGCAGGTCTCCAATACCTGGGCTTTCACGCAGTATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTTCTCATGGCATAACCCTTCTTTGCTATGGCTTTGGCCATGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATCGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAAGTTAAGCTGCGAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGCtttttttttttttttcttttttCCCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCGGGGGAAAAAAGTTTCCCCATAAGTCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAACATTTTAAACAAAGTAAAACTTGCAAAGGGATCATACGATGGTTTCTCCAGGGCTCTTCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13654766 949 - 18804593 GAAAGTCAT---GCATTTTCAAGAGAATTTCTGCATTAATTGTGTATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CAT-------ATGCGCAGGTCTCCAATACCTGGGCTTTCACGCAGTATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTTCTCATGGCATAACCCTTCTTTGCTATGGCTTTGGCCATGAAAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATCGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAAGTTAAGCTGCGAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGC-ttttttttttttttcttttttCCCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCGGGGGAAAAAAGTTTCCCCATAAGTCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAACATTTTAAACAAAGTAAAACTTGCAAAGGGATCATACGATGGTTTCTCCAGGGCTCTTCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13266645 948 + 18905526 GAAAGTCAT---ACATTTTCAAGAGAATTTCTGCATTAATTGTGTATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGGTGCTGTGCATTCAGC-AACT-CAT-------ATGCGCAGGTCTCCAGTACCTGGGCTTTCACACAGTATAGCCATTTGAATGTGGAGATGGCTTTGTTATTCTTCTCATAGCATAACCCTTCTTTGCTATGGCTTTGCCCGTGAAAGCTCAGATGCAGATTTCTTGAA-CCACTTACCAGGGCCAGATGTATATTATATCGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAAGTGAAGCTGCAAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGC--ttttttttttttcttttttCCCCTGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCGGGGGAAAAAAGTTTCCCCATAAGTCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAAGGGATCATACGATGGTTTCTCCAGGGCTCTTCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60094930 931 - 72318688 G-AAGTCAT---ACATTTTCAAGAGAATTTCTGCATTAATTGTGTATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CAT-------ATGCACAGGTCTCCAATACCTGGGCTTTTATGCAGTATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTTCTCATAGCATAACCCTTCTTTGCTATGGCTTTGGCTGTGAAAGCTCAGATGCAAATTTCTCGAA-CCACTTACCAGGGCC-------------ATCGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAACTTAAGCTGCAAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGC-----TTTTTTTTTCTTTTTTCCCCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGAAAAAAGTTTCCCCATAAGTCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CTGTTTAGCTTTTGATATGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAAGGGATCATACGATGGTTTCTCCAGGGCTCTTCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 431986 949 - 1517660 GAAAGTCAT---ACATTTTCAAGAGAATTTCTGCATTAATTGTGTATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCCATAAAACAAGCCTAGACACTGCATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTGGCGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATTCAGC-AACT-CAT-------ATGCGCAGGTCTCCAATACCTGGGCTTTCACGCAGTATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTCCTCATAGCATAACCCTTCTTTGCTATGGCTTTGCCCGTGAATGCTCAGATGCAGATTTCTTGAA-CCACTTACCAGGGCCAGATGTATATTATATCGATCCACTAGCAATATTAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAAGTTAAGCTGCAAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGCttttttttttttttcttttttCCCCCGCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATT-TGGGGGAAAAAGTTTCCCCATAAATCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAAGGGATCATACGATGGTTTCTCCAGGGCTCTTCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3528081 935 + 6513552 GAAAGTCAT---ACATTTTCAAGAGAATTTCTGCATTAATTGTATATGTCAAGATAGGCAAATT-CAAGCTCTGGGCCTGA-----------------------------------------GAACGATAAAGTACAAGCTGTAAAACAAGCCTAGACACTACATAAAGTCCCTGATCTAAAATCACATTTGTC--------CATG-------------ATCTGTTATTCTAGTGG--TTTTTAAATAAATGGGGCCAAGACATTCAAGAACTAGTTGCTGTGCATACAGCAAACT-CAT-------ATGCGCAGGTCTCCAATACCTGGGCTTTCACGCAGTATAGCCATTTGAATATGGAGATGGCTTTGTTATTCTTCTCATAACATAACCCTTCTTTGCTATGGCTTTGGCCGTGACAGCTCAGATGCAGATTTCTCGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCAC---------TAGAACTAGTGTC-----------TGCCCCAGAGGTTAGGGATATAGCAGCTGTGACTGTTTAGAAACAGATACCAAACTTAAGCTGCAAATTTTATTGCCCAATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAACCACAAATTTAAAGCAGGCAGTAGAGTCTGGAAATACGC-------TTTTTTTTCTTTTTTCCCCGCAATTGCTTTGAATACAAAATATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGC----TGCACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGAAAAAAGTTTCCCCATAAGTCTACTAAAGTCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTACATA-CAGTTTAGCTTTTGATATGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAAGGGATCATATGATGGTTTCTCCAGGGCTCTTCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105298658 939 + 117903854 GAAAGTCATACAACAtttttaagagaatttctgcatgaaatgtatatgttacgatagcccaatt-caagctctgagcctta-----------------------------------------gaacgataaagtaccagcgttaatacaaggttagacactacacAAAGTCCCTGATCTAAAATCGCATTTGTC--------CATG-------------ATATATTACTCTGGTGG--TTTTTAAATAAACGGGACCAACACATTCAAGAACCAATTTTTGTGCTTTTAGC-AACT-CAT-------ATGTACGGGTCTCCAATACCTGGGCTTTGATGCAGCATAGGCATTTGAATATGGAGACAGCTTTGTTATTCTG---ACAGCATAACTCTTCTTTCCTATGGCTTTGGCCCTGAAAGCTCAGATGCAGGTTTCTTGAACCCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAATATTTGAACTAGGGTC-----------TGCCCCAGAGGTTAGAGATATTACAGCTGTGACTGTTTAGAAACAGACACCGAACTTAAGCTGCAAATTTAATTGCTCATCTGGCCAGCAGCGGTACGCCACACCAGTAATAAAGATGAAACCACAGATTTAAAGCAGGCAATGGAATCTGGAAATACTC---------------CTTTTTTCCCCACAATTGCTTTGAATATAAAACATCTCAAAATGACAGGGATTTTGCCTGTAGAGTTGCTCATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGCTGTATGTACAAGAGTCAGTATGACAGTAACTAGATTTATTAAAACTTAAAAGTACCAAAGCCAAATTCCAGGGAAAAAAATTT-CCCATAAGTTTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTACTGCTACCATATTTGCTTACATA-CAGTTTGGCTTTTGATAGGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAGGGGATCATAAGACGGTTTCTCCAGGGCTCTTCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19485467 954 - 31320352 GAAAGTCATACAACATTTGCAAGAGAATTTCTGCATGAAAGGCATATGTTAAGATAGGCAAATT-CAAGCTCTGAGCCTTA-----------------------------------------GAATGATAAAGTACCAGTGTTAACACAAGGTTAGGCACTACACAAAGTCCCTGATCTAAAATTACATTTGTC--------CATG-------------ATCTGTTACTCTGGTGGTTTTTTTAAAAAAACGGGGCCAACACATTCAAGAACCAATTTTTGTGCTTTAATC-AACT-CAT-------GTGTACAGGTCTCCAATACCTGGGCTTTGATGCAGCATAGGCATTTGAATATGGAGACAGCTATGTTATTCTG---ATAGTGTAACTCTTCTTTACTATGGCTGTGGCCCTGAAAGCTCAGATGCAGATTTCTTGAA-CCACTTACCAGGGTCAGATGTATATTATATTGATCCACTAGCAATAGTTGAACTAGTATC-----------TGCCCCAGAGGTTAGAGATAGTACAGCTGTGACTGTTTAGAAACAGACACCAAATTTAAGCTGCAAATTTAATTGCTCAATTGGCCAGCAGCAATACGCCACACCAATAATAAAGATGAAACCACAAATTTAAAGCAGGCAGTAGAATCTGGAAATACTCtttttttttttttttttttttttCCCACAATTGCTTTGAATATAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTCATGAAGATGTGGCTGAAAGTGTTTCTTGAATTTGTTTATCCAGCTGTATGTACAAGAGTCAGTATGACAGTAACTAGATCTATTAAAACTTAAAAATACCAAAGCCAAATTCT-GGGGAAAAAATTT-CCCATAAGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCATATTTGCTTAAATA-CAGTTTGGCTTTTGATAGGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGGTTTCTCCGGGCCTCTTCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1681297 938 + 2203405 GAAAGTCATACAACATTTTCAAGAGAATTTCTGCATGAAATTTATATGTTAAGGTAGGCAAATT-CAAGCTCTGAGCCTTA-----------------------------------------GAATGATAAAGTGCCAGCAGTAACACAAGGTTAGACACTACACAAAGTCCCTGATCTAAAATCCCATTTGTC--------CGTG-------------ATCTATTACTCCGGTGG--TTTTTAAATAAACAGGGCCAACACATTCAAGAACCAATTTTTGTGCTTTCATC-AACT-CAT-------ATGTACAGGTCTCCAATACCTGGGCTTTGATGCAGCATAGGCATTTGAATATGGAGACGGCTTTGTTATTCTG---ATAGCATAACTCTTCTTTGCTATGGCTTTGGCCCTGAAAGCTCAGATGCAGATTTCTTGAA-CCACTTACCAGGGTCAGATGTATATTATATTGATCTACTAGCAATATTTGAACTAGTATC-----------TGCCCCAGAGGTTAGAGATATTACAGCTGTGACTGTTTAGAAACAGACACCAAATTTAAGCTGCAAATTTAATTGCTCAATTGGCCAGCAGCAATACGCCACACCGATAATAAAGATGAAACCACAAATTTAAAGCAGGCAGTAGAATCTGGAAATACTC---------------TTTTTTCCCCCACAATTGCTTTGAATATAAAACATCTCAAAGTGACAGGGATTTTGCCTGCAGAGTTGCTCATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGCTGTATGTACAAGAGTCAGTATGACAGTAACTAGATCTATTAAAACTTAAAAATACCAAAGCCAAATTCTGGGGAAAAAAACTT-CCCATAAGTCTACTAAAGCCTTGAATTCATAAATGATAAGCTTTATTGCTACCATATTTGCTTACATG-CAGTTTGGCTTTTGATAGGAAAGAAAATTTTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGGTTTCTCTAGGGCTCTTCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3633824 938 - 14941987 GAAAGTCACACAACATTTTCAAGAGAATTTCTGCATGAAATGTATATGTTAAGATAGGCGAATT-CAATCTCTGAGGCTTA-----------------------------------------GAACGATAAAGTACCAGCGGTAACACAAGGTTAGAAACTACACAAAGTCCCTGATCTAAAATCGCATTTGTC--------CATG-------------ATGTATTACTGTGGTGG--TTTTTAAATAAACGGGGCCAATACATTTGAGAACCAATTTTTGTGCTTTCAGC-AACT-CAT-------ATGTACAGATCTCCAATACCTGGGCTTTGATGCAGCATAGGCGTTTGAATATGGAGACAGCTTTGTTATTCTG---ATAGCATAACTCTTCTTTCCTATGGCTTTGGCCCTGAAAGCTCAGATGCAGATTTCTTGAA-CCACTTACCAGGGCCAGATGTATATTATATTGATCCACTAGCAATATTTGAACTAGTGTC-----------TGCCCCAGAGGTTAGAGATATTACAGCTGTGACTGTTTAGAAACAGACACCAAACTTAAGCTGCAAATTTAATTGCTCAATTGGCCAGCAGCAATACGCCACACCAATAATAAAGATGAAACCACAAATTTAAAGCAGGCAGTAGAATCTGGAAATATTC---------------TTTTTTTCCTCACAATTCCTTTGAATATAAAACATCTCAAAATGACAGGGATTTTGCCTGCAGAGTTGCTCATGAAGATGTGGCTGAGAGTGTTTCTTGAGTTTGTTTATCCAGCTGTATGTACAAGAGTCAGTATGACAGTAAGTAGATCTATTAAAACTTAAAAATACCAAAGCCAGATTCTGGGGAAAAAAATTT-CCCATAAGTCTACTAAAGCCTTGAATTCATAAATGAGAAGCTTTATTGCTACCACATTTGCTTACGTA-CAGTTTGGCTTTTGATAGGAAAGAAAATTCTAAACAAAGTAAAACTTGCAAAGGGATCATAAGATGGTTTCTCCAGGGCTCTTCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41548076 936 + 83067054 GAAAGTCAGACAATATTGTAAAGAAGA-TTCTGCACCAATTTTATGTCTTAGGATAGGCAAATT-CAAGTTCTGAGCCTTAGAACATAAG--------------------------------GAACAATAAAGTGCAAGCAATAAAATGAACCTAGATACTATATAAAGTCCCTAGtctaaaatcttatttgtcttatctattatactagtgaactcttatctattatgctaGTGG--GCTTTTAATAAATGGGGCCAAGATATCCAAGAAC-------TGTACATTCAGC-AACTAACC-------AAGTACAGATCTCCAATACATGGGCTTTCACACAGCACAGGCATTTGAATCTAGGAATGGCATTGTTATTCTTCTCATAACATAGGCCTTCTTTGATATGGCTTTGGCTGTGAGAGCTCAGATGCAGATTTCTTGAA-CCACTTACTAGGGCCAGATGTATACGATATTGATCCACTAGCAATATCAGAACTAGTATC-----------TGCCCC-----------------CAGCTGTGA--GTTTAGAAACAGACATCAAACATAAGCTGCAAATTTTATCGCACAGTTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACCAAACCACAGACTTAAAGCAGGCAGTGCAATCTGGAAACACTC---------------TTTTTT-----GCAATTGTTTTGAATACAAAACATCTCAAA-TGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGCTCCTTCAGTTTGTTTATCCAGC----TGTACAACAGTCAGTATGACAGTAACTAGATTTATAAAAATTTGAAAATACCAAAGCCAAACTCTGAGGAAAGGAGTTTCCCCATAAGTCTACTAAAGCCTTGTATTCATAAATGAGAAGCTTTATTGCTACTATATCTGCTTACATA-TAGTTTTGCTTTTGCTATGAAAGAAAATTTTAAACAACGTGCAACTTGCAAAGGGATCACAGGATGGTTTCTCCAGGGTTCTTCC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1288293 926 - 1406956 GAAAGTCAGACAATATTGTAAAGAGGATTTCTGCACCAATTTTATGTCTTAGGATAGGCAAATT-CAAGTTCTGAGCCTTAGAACATAAGGTAAATAT----------TGTATCACCTTACAGAACAATAAAGTGCAAGCAATAAAATCAACCTAGATACTATATAAAGTCCCTAGTCTAAAATCTTATTTGTC--------CATA-------------ATCTGTTATGCTGGTGG--ACTCTTAATAAATGGGGCCAAGATATCCAAGAAC-------TGTGTATTCAGC-AACTAACC-------AAGTACAGAACTCCAACACATGGGCTTTCATACAGCGCAGGCATTTGAATCTGGGTATGGCTTTGTTACTGTTCTCATAACATAGGCCTTCTTTGATACGGCTTTGGCTGTGAGAGCTCAGATGCAGATTTCTTGAA-CTACTTACTAGGGCCAGATGTATACGATATCGATCCACTAGCAATATCAGAACTAGTAT--------------------------------------CTGTGA--GTTTAG-AACTGACACCAAACATCAGCTGCAAATTTCATTGCACAGTTGGCCAGCAGTAATAGGCCACAGCAATAATAAAGACCAAACCACAGACTTAAAGCAGACAGTGCAATCTGGAAATACTC----------------TTTTT-----GCAATTGTTTTGAATACAAAACATCTCAAA-TGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGCTGAGAGTGTTCCTTCAGTTTGTTTATCCAGC----TGTACAACAGTCAGTATGACAGTAACTAGATTTGTAAAAATTTGAAAATACCAAAGCCAAACTCTGAGGAAAGGAGTTTCCCCATAAGTCTACTAAAGCCTTGTATTCATAAATGAGAAGCTTTATTGCTACTATATCTGCTTACATA-CAATTTTGCTTTTGCTATGAAAGAAAATTTTAAACAAAGTGCAACTTGCAAAGGGATCATAGGATGGTTTCTCCAGGGTTCTTCC i proCoq1.NW_012148742v1 C 0 I 242 s otoGar3.GL873546 11259720 900 - 20685099 GAAAGTCATACAATATTGTAAGGAGGAATTCTGCACAAGTCTTATGTTTTAAGATGGGCAAATT-CAAGTTCTGAGCCTTGGAACTTAAGGTAAATGT------GTGCTATTTCGCCTTGCAGAACAATAAGATGCAATCAGT------------------------AGTCTCTAGCTTAAAATGTTATTTATC--------TGTG-------------ATCAGGTATTCT-GTAG--ACTTTTAATAAGTGGGGCAAAGATATCCAAGAAC-------TG----------------ACC-------ACATACA----TC-----------CCTTCACACTGTACAGGCACTGGAGTCTGGGAAGGGCTTTGTTA---TTCTCATAACACAGCCCTTCTTTGACATGGCTTTGGCTGTGATAGCTCAGATGCAGATTTCTTGAA-CCCCTTACTGGAGGCAGATGTATGCTACATTGATCCTCTAGCAATATTAGAACTAGTATC-----------TGTCCACGAGTTAAGGGATATAGCAGCTGTGA--ATTTAGAAACAGACTCCAAACATAAGCTGCAAATTTTATTATACAATTGGCCAGCAGAAATAGGCCACAGCAATAATAAAGACAAAACCACAGAGTTAAAGCAAGCAGCAGAATCTGGAAGTACTC----------------TTTTT-----GCAATTGTTTTGAATACATAACATCTCAAA-TGACAGGGATTTTGCCTGCAGAGTTGCTAATGAAGATGTGGGTGAGAGTGTTCCTTGGGTTTGTTTATCCAGC----TGTACAACTGTCAGTGTGACGGTAACTAGGTTTATAAAAACTTGAAAATACCAAAGCCAAATTCTGAGGAAAGGAGTTTCCCCATAAGTCTACTAAAGCCTTGAATTCATAAATGGGAAGCTTTATTGCTACTATATCTGCTTACGTA-CAGTTTTGTTTTTGCTATGAAAGAAAATTTTAAACAAAGTGCAACTTGCAAAGGGATCACCGGATGGTTTCTCCGGGGTTCTTCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112338674 921 - 122678785 GGAAGTTGGCCAACATTTTAAGGAGAATTTCTGCAAGAATTTTATGCTTATAGGTAGGTAAATTCCAAGTTCTGAGCCTTAGAACATAAGGTAAATACTACTTGGCCTTATA----------GAAAGATAAAACACAAGCAGCAAAACAAGCCAAGGTGCTACCTAAAACCCCTCTACTGAAATCTTATTTGTC--------CATG-------------ATTTATTATTGTGGTGG--ACTCTTAGTAATTGGGGCAAAGATATGTGAGAAGCAATTGCTGTGCTTTCAGA-AACTGACC-------ACACACAGAACCCCAATCCAC---------------------------ATCTGGGGATGACTTAGTTATTCTTCTC-TAGCATAGCCCTTCCTGGAGATGGTTTTGGCTCTGAGAGCTCAGATGCAGATTTCTTGAA-C-----ACCAAGGCCGGATGTATATTATATTGATCCATGAGTACTGTTAGGACTAGTGTT-----------TTCCCCGGAGTTTGGAGAGATAGCAGCTGTGATTGTACAGAAACCGACACCAAACTTAAGCTGCAAATTTTATTGCACTATTGGCCAGCAGTAATAGGCCACACCAATAATAAAGACAAAAGCACAGATTTAAGGCAGGCAGTAGGATCTAGAAATACTC----------------TTTCT-----GCAATTGCTTTGAATACAAAACATCTCAAAATGACAGGGAATTTGCCTGCAGAGTTGCTAATGAAGATGTGGCT--GTGTCTGCCCTGAGTTTGTTTATCTGGC----TGTACAAGAGTCTGTATGGCTGTAACTGGATTTATACAAATTTAAAAATACCGCAGACAAATTCTGAGGAAAGAAGCTTCCCCATAAGCCCACTAAAACCCTGTGTTCATAAATGGGAGGCTTCCTTACTACCACATCTGCATACATA-TGGTTTTGCTTTTACTGTGAAAGAAAATTTTAGGCAAGGTGAACGTTTCAAGGGGAGCCCTGAATG---------GGGCTATTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 513776 908 - 2150887 GGAAGTCGACCAATATTTT---AAGAATTTCTGCAAGAACTTTATGTCTTGAGATAGTTAAATT-CAAGTTTTGCATCTTAGAATATACC--------------------------------AAAAGATAAAGTGCAAGCAATCAAACAAGTCGAGGCGCTACCTAAGGT-TTTGGACTGCAATCTTATTTGTC--------CAT--------------ATCTGTGATTAT--TGG--ACTCTTAATAATTGGAGTAAAGGTAGCCAATTAGTAATCACCGTGCATTCAGC-AACT-GACCATGACAATGC-CAGATCTCCAAT-----------------GAACAGACATTTGAATCTAAGGATGACTTTTTTCTCCTTCTCTTAGCATACTCCTTCATTTTTATGGCTTAGACTGTGAGAGCTCAGATGCAGAATTCTTGAA-CTTCTTACCAGGGTCAGATATATATTATACTGATTCACCAGCACTATTAGAACTAGTGTTCTATAGAACTATGCCCCAGAATTGAGGGATATAGCAGCTGTGACTATACAGAAACAGACACCAAACTTAAGCTGCAGATTTTATTGCACAATTGGCCAGCAGGAATAGGCCGTGCAAATAATAAAGACGAAACTGCAGATTTAAAGCAGGCAGTAGAATCTGTACATACTC----------------CTTTT-----GCAATTGCTTTGAATACAAAACATCCCCAAATGAGAGGGATTTTGCCTGCAGAGTTGCTAATGAAGCTGTAGCTGAGAGTGTT-CTTGAGTTTGTTTATACAGC----TGTACAAGAGTCAGTATGACAGTAACTGGAATTATAAAAATTTGAAACTGCTGAAGCCAAATTCTGAGGAAAGGAGTTTCCCCATAAGTCCACTAAAGACC------------TGGGAAGCTTTATTGCTACCACATCTGCTTACATACCAGTTTTGCTTTTGCTATGAAAGAAAATTTTAAAGAAAGTTAACCTTGCAAGGACAT-------TGG-------GGGGCTCTTCC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111867861 174 + 195471971 I a score=580542.000000 s hg38.chr18_GL383571v1_alt 166508 48 + 198278 ACCCTCCCTTTCCCC---TGG-CCTGGTATCCTTACACCAGTGT---------TTCTCAAC s panTro5.chr18 65076414 48 + 78221452 ACCCTCCCTTTCCCC---TGG-CCTGGTATCCTTACACCAGTGT---------TTCTCAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195431 48 + 77229886 ACCCTCCATTTCCCC---TGG-CCTGGTATCCTTACACCAGTGT---------TTCTCAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5414922 48 + 17472758 ACCCTCCCTTTCCCC---TGG-CCTGGTATCCTTACACCAGTGT---------TTCTCAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455455 48 - 152096393 ACCCTCCCTTTCCCC---TGG-CCTGGTATCCTTACACCAGCGT---------TTCTCAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405128 48 + 70235451 ACCCTCCGTTTCTCC---TGG-CCGGATGTCCTTACTCCAGTGT---------TTCTCAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096439 48 - 75711847 ACCCTCCGTTTCTCC---TGG-CCTGATGTCCTTACTCCAGTGT---------TTCTCAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13655715 48 - 18804593 ACCCTCCGTTTCTCC---TGG-CCTGATGTCCTTACTCCAGTGT---------TTCTCAAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267593 48 + 18905526 ACCCTCCGTTTCTCC---TGG-CCTGATGTCCTTACTCCAGTGT---------TTCTCAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60095861 48 - 72318688 ACCCTCCATTTCTCC---TGG-CCTGGTGTCCTTACTCCAGTGT---------TTCTCAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 432935 48 - 1517660 ACCCTCCGTTTCTCC---TGG-CCTGATGTCCTTACTCCAGTGT---------TTCTCAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529016 48 + 6513552 ACCCTCCGTTTCTCC---TGG-CCTGGTGTCCTTACTCCAGTGT---------TTCTCAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299597 48 + 117903854 TCCTTCCCTTTCCCC---TGG-CCTGGTCTACTTACACCAGTGT---------TTCTCAAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486421 48 - 31320352 TCCCTCCCTTTCCCC---TGG-CCTGGTCTACTTACACCAGTGT---------TTCTCAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682235 48 + 2203405 TCCCTCCCTTTCCCC---TGG-CCTGGTCTACTTACACCAGTGT---------TTCTCAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3634762 48 - 14941987 TCCCTCCATTTCCCC---TGG-CCTGGTCTACTTACACCAGTGT---------TTCTCAAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41549012 48 + 83067054 TCCTTCCCTTTCCTC---TGT-TCTCCTCTACTTACACcagtgg---------ttctcaac i micMur3.chr19 C 0 I 199 s otoGar3.GL873546 11260620 58 - 20685099 TCCTTCCCTTCCCTC---TGTCCCTGCTCTACTTACACCAGTATAAAGttttcctctcagc i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339595 39 - 122678785 CCTCTCCCTGCCCCC---TGT----------CTCATACTGgtgg---------ttctcaac i canFam3.chr1 C 0 I 4 s dasNov3.JH575754 514684 49 - 2150887 TCCCTTCCTTCCCCCACATAT-CCC--TTCACTTATATcagtgt---------ttttcaac i dasNov3.JH575754 C 0 I 22 e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289219 242 - 1406956 I a score=1768969.000000 s hg38.chr18_GL383571v1_alt 166556 164 + 198278 Aggacatttggcaatg----tctggagaaatttcaat-------gttggtct-cggttagtgggaggga--ctgctggaatctagtgaataga--ggtc-a-ggatgctactaaatagcctgcaatgaacaggacaacttctcctctcctcctgcctcacaagtcaaagaattatgcagact s panTro5.chr18 65076462 164 + 78221452 Aggacatttggcaatg----tctggagaaatttcaat-------gttggtct-cggttagtgggaggga--ctgctggaatctagtgaataga--ggtc-a-ggatgctactaaatatcctgcaatgaacaggacaacttctcctctcctcctgcctcacaagtcaaagaattatgcaggcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195479 164 + 77229886 Aggacatttggcaatg----tctggagaaatttcaat-------gttggtct-cggttagtgggaggga--ctgctggaatctagtgaataga--ggtc-a-ggatgctactaaatatcctgcaatgaacaggacaacttctcctctcctcctgcctcacaagtcaaagaattatgcaggcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5414970 164 + 17472758 Aggacatttggcaatg----tctggagaaatttcaat-------gttggtct-cggttagtgggaggga--ctgctggaatctagtgaataga--ggtc-a-ggatgctactaaatatcctgcaatgaacaggacaacttctcctctcctcctgcctcacaagtcaaagaattatgcaggcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455503 164 - 152096393 Aggacatttggcaatg----tctggagaaatttcaat-------attggtct-cggttagtgggaggga--ctgctggaatctagtgaataga--ggtc-a-ggatgctactaaatatcctgcaatgaacaggataacttcccctctcctcctgcctcacaaaacaaagaattatgcaggcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405176 164 + 70235451 Aggacatttggcaata----tctggagaaatttcaat-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--catc-a-ggatgctactaaatatcctgcaatgcacaggacaacttcccctcccctcttgtctcacaaaacaaagaattatccagccc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096487 164 - 75711847 Aggacatttggcaata----tctggagaaatttcaat-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--catc-a-ggatgctactaaatatcctgcaatgcacaggacaacttcccctcccctcttgtctcacaaaacaaagaattatccagccc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13655763 164 - 18804593 Aggacgtttggcaata----tctggagaaatttcaat-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--catc-a-ggatgctactaaatatcctgcaatgcacaggacaacttcccctcccctcttgtctcacaaaacaaagaattatccagccc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267641 164 + 18905526 Aggacatttggcaata----tctggagaaatttcagt-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--catc-a-ggatgctactaaatatcctgcaatgcacaggacaacttcccctcccctcttgtctcacaaaacaaagaattatccagccc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60095909 164 - 72318688 Aggacatttggcaata----tctggagaaatttcaat-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--cctc-a-ggatgctactaaatatcctgcaatgcacaggacaacttccccttccctcttgtctcacaaaaccaagaattatccagccc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 432983 164 - 1517660 Aggacatttggcaata----tctggagaaattgcaat-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--catc-a-ggatgctactaaatatcctgcaatgcacaggacaacttcccgtcccctcttgtctcacaaaacaaagaattatccagccc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529064 164 + 6513552 Aggacatttggcaata----tctggagaaatttcaat-------attggtct-tggatagtgggaggga--ctgctggaatctagtgaataga--catc-a-ggatgctactaaatatcttgcaatgcacaggacaacttcccctcccctcttgtctcacaaaacaaagaattatccagccc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299645 164 + 117903854 Aggacctttggcaatg----tctgcagaaattttgat-------attggtct-tgtttagtgggaggga--ctgccggaatctggtgaataga--ggtc-a-gaatgctgctaaataccctacaacgcacaggacagcttcttctcccctcttgccctgcaaaacaaagaattattcagctc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486469 164 - 31320352 Aggacatttggcaatg----tctgcagaaattttgat-------attggtgt-tgtttagtgggaggga--ctgctggaatctggtgaataga--ggtc-a-gaatgctgctaaatatcatacaatgcacaggacaacttcctctcccctcttgactcacaaaacaaagaattatccagctc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682283 164 + 2203405 Aggacatttggcaatg----tctgcagaaaatttgat-------attggtct-tgtttagtgggaggga--ctgctggaatctggtgaataga--gatc-a-gaatgctgctaaataccctacaatgcacaggacaacttcctctcccctcttgcctcacaaaacaaagaattatccagctc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3634810 164 - 14941987 Aggacatttggcaata----tctgcagaaattttgat-------attggtct-tgttcagtgggaggga--ctgatggaatctggtgaataga--ggtc-a-gaatgctgctaaatatcctacaatgcacaggacaacttcctctcccctcttgtctcacaaaacaaagaattatccagctc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11260678 163 - 20685099 -agacatttggcaatg----tctggagaaatttggattatcacaattgatctagggctggggagagaga--ttgctggaatctcgtggctaga--gaccaa-ggatgctgttaaaaatcctgcaaggcacaggaaaacctctcttcctct--------acaaaac-aagaattattcacccc i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339638 157 - 122678785 ggcaaatttgacaatggacatccagagaaatt------------tttgatcc-cctgggggatgaagga--ctgctggcatccagtgggtagaccggcc-agggatgct-ttagacatcctacagtgcacagaataaccctgtccctcacc--------ccaaataaagcattatccaaccc i canFam3.chr1 I 4 C 0 s dasNov3.JH575754 514755 106 - 2150887 gggatatttgtcaaca----tctcaagacatttt--t-------aattgtta-caaatgggaaagtggatgctgcaggtgtctaggggggaga--ggcc-agggatgctactacactttcaac----------------------------------------------------------- i dasNov3.JH575754 I 22 C 0 e micMur3.chr19 41549060 199 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289219 242 - 1406956 I a score=1297174.000000 s hg38.chr18_GL383571v1_alt 166720 92 + 198278 agaaagtcagtactgctgagaatgagaaactctgACCCATCCCACTGACTCTAAAAATTGATTATGTGCTAATTGTTGGTA---GTTCAAATCAA s panTro5.chr18 65076626 92 + 78221452 agaaagtcagtagtgctgagaatgagaaactctgACCCATCCCACTGACTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195643 92 + 77229886 agaaagtcagtagtgctgagaatgagaaactctgACGCATCCCACTGACTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415134 92 + 17472758 agaaagtcagtactgctgagaatgagaaactctgACCCATCCCACTGACTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455667 92 - 152096393 agaaagtcagtactgctgagaatgagaaactctgACCTATCCCACTGACTCTAAAAATTGATTATGTACAAATTGTTGGTA---GTTCAAATCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405340 90 + 70235451 agaaagtcagt--tgctgagaatgagaaactctgACCCATCCCACTGGCTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096651 90 - 75711847 agaaagtcagt--tgctgagaatgagaaactctgACCCATCCCACTGGCTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13655927 90 - 18804593 agaaagtcagt--tgctgagaatgagaaactctgACCCATCCCACTGGCTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267805 90 + 18905526 ggaaagtcagt--tgctgagaatgagaaactctgACCCATCCCACTGGCTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096073 90 - 72318688 agaaagtcagt--tgctgagaatgagaaactctAACCCATTTCACTGGCTCTAAAAATTGATTATGTGCAAATTGTTGGTA---GTTCAAATCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 433147 90 - 1517660 ggaaagtcagt--tgctgagaatgagaaactctgACCCATCCCACTGGCTCTAAAAATTGATTATGTGCAAATTGTTGGTA---ATTCAAATCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529228 90 + 6513552 agaaagtcagt--tgctgagaatgagaaactctgACCCATCCCACTGGCTCTAAAAATTGATTATGTGCAAGTTGTTGGTA---GTTCAAATCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299809 92 + 117903854 ggaaagtcagtactgctgagaatgagaaactgtgACCCATCCCACTGACTCTAAAAATGGATTATGAGCAAATTGTTGGTA---GTTCAAATCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486633 91 - 31320352 ggaaagtccttactgctgagaatgagagacTGTAACCCATTCCACTGACTC-AAAAATGAATTACGAACCAATTGTTGATA---GTTCAAATCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682447 92 + 2203405 ggaaagtcagtactgctgagaatgagaaactgtgACCCATCCCACTGACTCTAAAAATGGATTATGAACAAATTGTTGGTA---GTTCAAATCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3634974 92 - 14941987 agaaagtcagtactgctgagaatgagaaactgtgACCCATCCCACTGACTCTAAAAATGGATTATGAGCAAATTGTTGGTA---GTTCAAATCAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41549259 92 + 83067054 agaatgtcagtagtgctgaggttgagaaactctgGCCTAGCCCACTGACTCTAACAATTGATTATGTGTGAATTGTTGGCA---GTTCAAATCAA i micMur3.chr19 I 199 I 1247 s proCoq1.NW_012148742v1 1289461 92 - 1406956 agaatgtcagtcctgctgaggttaagaaactctgGCCTAGCCCACTGATTCTAACAATTGATTATGTGTGAATTGTTGGCA---GTTCAAATCAA i proCoq1.NW_012148742v1 I 242 C 0 s otoGar3.GL873546 11260841 91 - 20685099 agagcacca-tagtactgagcttgagaaaatctgGCCTAGCCCACTGACTATTACAATAGATTTTATGTGAATTGTTGATG---GTTCGAATCAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339795 91 - 122678785 agaatgttcatactactgagtgtgagaaaccTCATCCTGGTTCACGGACTCTAAAA----AGCATGTGCATATTATTGGTAGTTGTTCAAACAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 514861 91 - 2150887 --aaagtcagtacagccGAGGCTGAGAAATTCT-CCCTAGACTCTTGACTCTAAAAACTGATTATGTGC-AATTGTTGATAGTTGTTCAAATCAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111867861 174 + 195471971 I a score=586522.000000 s hg38.chr18_GL383571v1_alt 166812 50 + 198278 TTCCTAAATTGT-CCCCCTGACTTGCCAATTACCTATTTGCAGTTTGTTCT s panTro5.chr18 65076718 50 + 78221452 TTCCTAAATTGT-CCCCCTGACTTGCCAATTACCTATTTGCGGTTTGTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195735 50 + 77229886 TTCCTAAATTGT-CCCCCTGACTTGCCAATTACCTATTTGCGGTTTGTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415226 51 + 17472758 TTCCTAAATTGTCCCCCCTGACTTGCCAATTACCTATTTGCAGTTTGTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455759 50 - 152096393 TTCCTAAATTGT-CCCCCTGCCTTGCCAATTACCTATTTGCAGTTTGTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405430 50 + 70235451 TTTCTAAATTGT-CCACCTGACTTGCCAGTTACCTATTTGCAGTTTGTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096741 50 - 75711847 TTTCTAAATTGT-CCACCTGACTTGCCAATTACCTATTTGCAGTTTGTTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656017 50 - 18804593 TTTCTAAATTGT-CCACCTGACTTGCCAATTACCTATTTGCAGTTTGTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267895 50 + 18905526 TTTCTAAATTGT-CCACCTGACTTGCCAATTACCTATTTGCAGTTTGTTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096163 50 - 72318688 TTCCTAAATTGT-CCACCTGACTTGCCAATTACCTACTTGCAGTTTGTTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 433237 50 - 1517660 TTTCTAAATTGT-CCACCTGACTTGCCAATTACCTATTTGCAGTTTGTTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529318 50 + 6513552 TTCCTAAATTGT-CCACCTGACTTGCCAATTACCTACTTGCAGTTTGTTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299901 50 + 117903854 GTCCTGAACTGT-CCTCTTAGCTTGCCAATTACCTACTTGCAGTTTGTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486724 50 - 31320352 GTCCTGAACTGT-CCCCTTAGCTTGCCAATTCCCTAGTTGTAGTTTGTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682539 50 + 2203405 GTCTTGAACTGT-CCACTTAGCTTGCCAATTACCTACTTGCAGTTTGTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635066 50 - 14941987 GTCCTGAACTGT-CCCCTTAGCTTGCCAATTACCTACTTGCAGTTTGTTTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1289553 50 - 1406956 GTCCTATATTAT-CCCCTGGGCTTCCCAATCACCTCTTTGCAGCTTGTTCC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11260932 49 - 20685099 GTCCTGTG-CAT-CACCTGGACGTCCCTACCACTTCTTTGCAGTTTATTCC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339886 49 - 122678785 GACTTAAAGTAT-CCCCTGGACTTTCT-GTCACCACTTGGCAGTTAGTTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 514952 50 - 2150887 GTCCTGAATTAT-CTCCTGGGCGTCACAATCACCTTTTAGCAATTCATTCT i dasNov3.JH575754 C 0 I 3 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I a score=111202.000000 s hg38.chr18_GL383571v1_alt 166862 8 + 198278 AGAGCCAG s panTro5.chr18 65076768 8 + 78221452 AGAGCCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195785 8 + 77229886 AGAGCCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415277 8 + 17472758 AGAGCCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455809 8 - 152096393 AGAGTCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405480 8 + 70235451 AGAGCCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096791 8 - 75711847 AGAGCCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656067 8 - 18804593 AGAGCCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267945 8 + 18905526 AGAGCCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096213 8 - 72318688 AGAGCCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 433287 8 - 1517660 AGAGCCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529368 8 + 6513552 AGAGCCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299951 8 + 117903854 AGAGCCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486774 8 - 31320352 ACAGCCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682589 8 + 2203405 AGAGCCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635116 8 - 14941987 AGAGCCAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1289603 8 - 1406956 AGAACCAG i proCoq1.NW_012148742v1 C 0 I 576 s otoGar3.GL873546 11260981 8 - 20685099 AGAGTCAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339935 8 - 122678785 GGAGCCAG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e dasNov3.JH575754 515002 3 - 2150887 I a score=75882.000000 s hg38.chr18_GL383571v1_alt 166870 6 + 198278 CCgtta s panTro5.chr18 65076776 6 + 78221452 CCgtta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195793 6 + 77229886 CCgtta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415285 6 + 17472758 CCgtta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455817 6 - 152096393 CCgtta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405488 6 + 70235451 CCgtta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096799 6 - 75711847 CCgtta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656075 6 - 18804593 CCgtta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267953 6 + 18905526 CCgtta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096221 6 - 72318688 CCATta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 433295 6 - 1517660 CCgtta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529376 6 + 6513552 CCgtta i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299959 6 + 117903854 Ctgtta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486782 6 - 31320352 Ctgtta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682597 6 + 2203405 CCgtta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635124 6 - 14941987 CCgtta i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11260989 6 - 20685099 Atgtta i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339943 6 - 122678785 CCGTTA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289611 576 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I a score=1158572.000000 s hg38.chr18_GL383571v1_alt 166876 120 + 198278 tgg-ctaaaatgtatgtgtccctccaaaatttacatgttggaac------caaattggtagtattaagaggtggagccgtttgggaa------------------------------gtcctct--tctcatgaatgacattagtg-ccgtataaaagag s panTro5.chr18 65076782 120 + 78221452 tgg-ctaaaatgtatgtgtccctccaaaatttacatgttggaac------caaattggtagtattaagaggtggagccgtttgggaa------------------------------gtcctct--tctcatgaatgacattagtg-ccttataaaagag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195799 113 + 77229886 tgg-ctaaaatgtatgtgtccctccaaaatttacatgttggaac------caaattggtagtattaagaggtggagccgtttgggaa------------------------------gtcctct--tctcatgaatgacattagtg-ccttat------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415291 120 + 17472758 tgg-ctaaaatgtatgtgtccctccaaaatttatatgttggaac------caaattggtagtattaagaggtggagccgtttgggaa------------------------------gtcctct--tctcatgaatgacattagtg-ccttataaaagag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455823 120 - 152096393 tgg-ctaaaacgtatgtgtccctccaaaatctatatgttggaac------caaattggtagtattaagaggtggagccatttgggaa------------------------------gtccttt--tctcatgaatggcattagtg-ccttataaaagag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405494 120 + 70235451 tga-ctgaaatgtacgtgtccctccaaaatttatatgttggaac------caatgtggtagtattaagaggtggagccatttgggaa------------------------------gtccttt--tctcatgaatgacattagtg-ccttatgaaagag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096805 120 - 75711847 tga-ctgaaatgtacgtgtccctccaaaatttatatgttggaac------caatgtggtagtattaagaggtggagccatttgggaa------------------------------gtccttt--tctcatgaatgacattagtg-ccttataaaagag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656081 120 - 18804593 tga-ctgaaatgtacgtgtccctccaaaatttatatgttggaac------caatgtggtaatattaagaggtggagccatttgggaa------------------------------atccttt--tctcatgaatgacattagtg-ccttataaaagag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13267959 120 + 18905526 tgg-ctaaaatgtacgtgtccctccaaaatttatatgttggaac------caatgtggtagtattaagaggtggagccatttgggaa------------------------------gtccttt--tctcatgaatgacattagtg-ccttataaaagag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096227 120 - 72318688 tgg-ctaaaatgtacgtgtccctccaaaatttatatgttggaac------caatgtggtagtattaagaggtggaatcatttgggaa------------------------------gtccttt--tctcatgaatgacattagtg-ccttataaaagag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 433301 120 - 1517660 tgg-ctaaaatgtacgggtccctccaaaatttatatgttggaac------caatgtggtagtattaagaggtggagccatttgggaa------------------------------gtccttt--tctcatgaatgacattagtg-ccttataaaagag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529382 120 + 6513552 tgg-ctgaaatgtatgtgtccctccaaaatttatatgttggaac------cagtgtggtagtattaagaggtggagccatttgggaa------------------------------gtccttt--tctcatgaatgacattagtg-ccttataaaagag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105299965 117 + 117903854 tgg-ctagaatgtacgtgttcctcc--aatgtgtatgttggaac------caatgtgataatattaagagatggagcctttggggaa------------------------------gtccttt--tctcgtgagtgac-tttgtg-ccttttaaaagag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486788 119 - 31320352 tgg-ctagaatgttcgtgttcctccaaaacgtgtatgttggaac------caacgtgataatattaagagatggagccttt-ggaaa------------------------------gtccttt--tctcatgaatgacatttgtg-atttattaaagag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682603 120 + 2203405 tgg-ctagaatgtacgtcttcctccaaaatgtgtatattggaac------cagtgtgataatattaagagatggagccttttgggaa------------------------------gtccttt--tcttatgaatgacatttgtg-acttattaaagag i cebCap1.NW_016107689v1 C 0 I 10 s aotNan1.NW_018502140v1 3635130 118 - 14941987 tgg-ctagaatgtacgtgttcctcc--aatgtgtatgttggaac------caatgtgataatattaagagatggagccttttgggaa------------------------------gtccttt--tctcatgaatgacatttgtg-acttataaaagag i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11260995 159 - 20685099 tggttttgaaagtatgtgtccttccaaatttcatgtgtcagaacataatatgacatgataacattaggcagtgg-gtcctttgagaactgattactcaatcatggtaacccgcaggggttctctgccctcctgaatgggattggtgcccttacaaaagag i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289611 576 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I e canFam3.chr1 112339949 0 - 122678785 C a score=8666.000000 s hg38.chr18_GL383571v1_alt 166996 1 + 198278 g s panTro5.chr18 65076902 1 + 78221452 g i panTro5.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415411 1 + 17472758 g i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455943 1 - 152096393 g i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405614 1 + 70235451 g i rheMac8.chr18 C 0 I 9 s macFas5.chr18 63096925 1 - 75711847 g i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656201 1 - 18804593 g i macNem1.NW_012016688v1 C 0 I 9 s cerAty1.NW_012001075v1 13268079 1 + 18905526 g i cerAty1.NW_012001075v1 C 0 I 9 s chlSab2.chr18 60096347 1 - 72318688 g i chlSab2.chr18 C 0 I 8 s manLeu1.NW_012106698v1 433421 1 - 1517660 g i manLeu1.NW_012106698v1 C 0 I 9 s colAng1.NW_012115433v1 3529502 1 + 6513552 g i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300082 1 + 117903854 g i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486907 1 - 31320352 g i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3635248 1 - 14941987 g i aotNan1.NW_018502140v1 C 0 I 9 s otoGar3.GL873546 11261154 1 - 20685099 a i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289611 576 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I e canFam3.chr1 112339949 0 - 122678785 C e cebCap1.NW_016107689v1 1682723 10 + 2203405 I e panPan2.chr18 64195912 0 + 77229886 C a score=-4770.000000 s hg38.chr18_GL383571v1_alt 166997 15 + 198278 tgc-cttaaaaaaaag s panTro5.chr18 65076903 15 + 78221452 tgc-cttataaaaaag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195912 7 + 77229886 ---------aaaaaag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415412 15 + 17472758 tgc-cttaaaaaaaag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455944 16 - 152096393 tgcatttaaaaaaaag i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63096926 9 - 75711847 -----ttgaagata-- i macFas5.chr18 C 0 C 0 s colAng1.NW_012115433v1 3529503 9 + 6513552 -----ttgaaaata-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300083 9 + 117903854 -----ttgaaggga-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486908 9 - 31320352 -----ttgaaggga-- i saiBol1.JH378121 C 0 C 0 s otoGar3.GL873546 11261155 11 - 20685099 ---ggttgaagaaa-- i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289611 576 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I e canFam3.chr1 112339949 0 - 122678785 C e aotNan1.NW_018502140v1 3635249 9 - 14941987 I e cebCap1.NW_016107689v1 1682723 10 + 2203405 I e manLeu1.NW_012106698v1 433422 9 - 1517660 I e chlSab2.chr18 60096348 8 - 72318688 I e cerAty1.NW_012001075v1 13268080 9 + 18905526 I e macNem1.NW_012016688v1 13656202 9 - 18804593 I e rheMac8.chr18 57405615 9 + 70235451 I a score=463130.000000 s hg38.chr18_GL383571v1_alt 167012 49 + 198278 gtgccctagtttccttttggccttttggtctcagtctatgttgtgctta s panTro5.chr18 65076918 49 + 78221452 gtgccctcgtctccttttggccttttggtctcagtccatgttgtgctta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195919 49 + 77229886 gtgccctcgtctccttttggccttttggtctcagtccatgttgtgctta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415427 49 + 17472758 gtgccctagtctcctttcggccttttggtctcagtccatgttgtgctta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139455960 49 - 152096393 gtgccctagtctccttttggccttttggtctcagtccatgttgtgcttc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405624 49 + 70235451 gtgctttggtctctttttggccttttggtctcagtccattttgtgctcc i rheMac8.chr18 I 9 C 0 s macFas5.chr18 63096935 49 - 75711847 gtgctttggtctctttttggccttttggtctcagtccattttgtgctcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656211 49 - 18804593 gtgctttggtctctttttggccttttggtctcagtccattttgtgctcc i macNem1.NW_012016688v1 I 9 C 0 s cerAty1.NW_012001075v1 13268089 49 + 18905526 gtgctttggtctctttttggccttttggtctcagtccattttgtgctcc i cerAty1.NW_012001075v1 I 9 C 0 s chlSab2.chr18 60096356 49 - 72318688 gtgctttggtctctttttggccttttggtctcagtccattttgtgcttc i chlSab2.chr18 I 8 C 0 s manLeu1.NW_012106698v1 433431 49 - 1517660 gtgctttggtctctttttggccttttggtctcagtccattttgtgctcc i manLeu1.NW_012106698v1 I 9 C 0 s colAng1.NW_012115433v1 3529512 49 + 6513552 gtgctttggtctctttttggccttttggtctcagtccattttgtgcttc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300092 48 + 117903854 gtaccctagtctc-ttttggccctttggtctcagtccattttgtgttgc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486917 48 - 31320352 gtgccctagtctc-tttcggccctttgatctcagtccattttgtgttgc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682733 48 + 2203405 gtgccctagtctc-ttttgaccctttgatctcagtccattttgtgttgc i cebCap1.NW_016107689v1 I 10 C 0 s aotNan1.NW_018502140v1 3635258 48 - 14941987 gtgccccagtctc-ttttggccctttggtctcagtccattttgtgttgc i aotNan1.NW_018502140v1 I 9 C 0 s otoGar3.GL873546 11261166 48 - 20685099 gtgcccgagatcctgtttgctcctctg-tcttagtctgttttgtgctgc i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1289611 576 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I e canFam3.chr1 112339949 0 - 122678785 C a score=6318896.000000 s hg38.chr18_GL383571v1_alt 167061 587 + 198278 tataacag--aatacctgaccctgggtaatttataatgaatggaaatttatttcctcacagttttggaggctaggaagtccaaggtcaaggtgctggcagattagggcccagtttctctactgcaaagatggcacctgaaagctgcagcctccagagatgaaggacattatatcttcacatggcagaaaagga--ggagaaagagagaatcca---ctcccaccagccctttttatag-agcattaatccattcttcatgaactaaacaggtttctcatttggccacacctcctaacactgttgcattggggaatacgtttccaacacttggatttgggggaacacgttgagaccatagcaccttc----catctcttcctccacatgaggacacagtgttcatttctttattgcctcttccattatgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacacagaa-tcttctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctatgtataaattactttatctgtggtatttcattatagcagcaaggaca s panTro5.chr18 65076967 587 + 78221452 tataacag--aatacctgaccctgggtaatttataatgaatggaaatttatttcctcacagttttggaggctaggaagtccaaggtcaaggtgctggcagattagggcccagtttctctgctgcaaagatggcacctgaaagctgcagcctccagagatgaaggacattatatcttcacatggcagaaaaggc--ggagaaagagagaatcca---ctcccaccagccctttttatag-agcattaatccattcttcatgaactaaacaagtttctcatttggccacacctcctaacactgttgcattggggattacgtttccaacacttggatttgggggaacacgttgagaccatagcaccttc----catctctttctccacatgaggacacagtgttcatttctttattgcctcttccattatgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagatgcagaa-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctatgtataaattactttatctgtggtatttcattatagcagcaaggaca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64195968 587 + 77229886 tataacag--aatacctgaccctgggtaatttataatgaatggaaatttatttcctcacagttttggaggctaggaagtccaaggtcaaggtgctggcagattagggcccagtttctctgctgcaaagatggcacctgaaagctgcagcctccagagatgaaggacattatatcttcacgtggcagaaaaggc--ggagaaagagagaatcca---ctcccaccagccctttttatag-agcattaatccattcttcatgaactaaacaggtttctcatttggacacacctcctaacactgttgcattggggattacgtttccaacacttggatttgggggaacacgttgagaccatagcaccttc----catctctttctccacatgaggacacagtgttcatttctttattgcctcttccattatgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacgcagaa-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctatgtataaattactttatctgtggtatttcattatagcagcaaggaca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5415476 586 + 17472758 tataacag--aatacctgaccctgggtaatttataatgaatggaaatttatttcctcacagttttggaggctaggcagtccaaggtcaaggtgctggcagattagggcccagtttctctgctgcaaagatggcacctgaaagctgcagcctccagagatgaaggacattatatcttcacatggcag-aaagga--ggagaaagagagaatcca---ctcccaccagccctttttatag-agcactaatccattcttcatgaactaaacaggtttctcatttggccacacctcctaacactgttgcatcggggattacgtttccaacacttggatttgggggaacacgttgagaccagagtaccttc----catctcttcctccacatgaggacacagtgttcatttctttattgcctcttccactatgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacgcagaa-tcttctggcaacttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctatgtataaattactttatctgtggtatttcattatagcagcaaggaca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456009 587 - 152096393 tataacag--aatacctgaccctgggtaatttataatgaatggaaatttatttcctcgcagttttggaggctgggatgtccaaaatcaaggtgctggcagattagggcccagtttctctgctgcaaagatggcacctgaatgctgcaccctccagagatgaaggacattatatcttcacatggcagaaaagga--ggagaaagagagaaccca---ctcccaccaaccctttttatag-agcattaatccattcttcatgaactaaacagctttctcatttggccacacctcccaacactgttgcattggggattacgtttccaacacttggatttgggggaacatgttgagaccatatcaccttc----catctcttcctccacatgaggacacagtgttcatttctttattgcctcttccactatgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacacagaa-tctcctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgcgatgtataaattactttatctgtggtatttcattatagcagcaaggaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57405673 567 + 70235451 cgtacc----aatacctgaccctgggtaatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggctgattagggcccagtctctctgctgcaaagatggcacctgaatgcggcagcctccagagaggaaggacattatatcttcacatggcagaa-------------------aaccca---ctctcaaaagccctttttatgg-agcattaatccattcttcgtcaactaaacagctttgtcatttggccacacctcccaacactgttgcattgggga-tacgtttccagcacttggacattggggaacacGTTGAGACCACCGCAccctc----catctcttcctccacatgaggacacagtgttcatttctttatttcctcttccactgtgtgaggatgcagcaagacatatcatcttggaagcag-----agagtaagccctccccagacacagca-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaatacatttctgctctgtataaattactttatctatggtattttgtgatagcagcaaggaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63096984 567 - 75711847 cgtaac----aatacctgaccctgggtaatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggcagattagggcccagtctctctgctgcaaagatggcacctgaatgcggcagcctccagagaggaaggacattatatcttcacatggcagaa-------------------aaccca---ctctcaaaagccctttttatgg-agcattaatccattcttcgtgaactaaacagctttgtcatttggccacacctcccaacactgttgcattgggga-tacgtttccagcacttggactttggggaacacgttgagaccaccgcaccctc----catctcttcctccacatgaggacacagtgttcatttctttatttcctcttccactgtgtgaggatgcagcaagacatatcatcttggaagcag-----agagtaagccctccccagacacagca-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaatacatttctgctctgtataaattactttatctatggtattttgtgatagcagcaaggaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656260 567 - 18804593 cgtaac----aatacctgaccctgggtaatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggcagattagggcccagtctctctgctgcaaagatggcacctgaatgcggcagcctccagagaggaaggacattatatcttcacatggcagaa-------------------aaccca---ctctcaaaagccctttttatgg-agcattaatccattcttcgtgagctaaacagctttgtcatttggccacacctcccaacactgttgcattgggga-tacgtttccagcacttggactttggggaacacgttgagaccaccgcaccctc----catctcttcctccacatgaggacacagtgttcatttctttatttcctcttccactgtgtgaggatgcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacacagca-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctctgtataaattactttatctatggtattttgtgatagcagcaaggaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268138 567 + 18905526 cgtaac----aatacctgaccctggataatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggcagattagggcccagtctttctgctgcaaagatggcacctgaatgcggcagcctccagagaggaaggacattatatcttcacatggcagga-------------------aaccca---ctctcaaaagccctttttatgg-agcattaatccattcttcgtgaactaaacagctttctcatttggccacacctcccaaaactgttgcattgggga-tacgtttccagcacttggactttggggaacacgttgagaccaccgcgccctc----catctcttcctccacatgaggacacagtgttcatttctttatttcctcttccactgtgtgaggatgcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacacagca-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctctgtataaattactttatctatggtattttgtgatagcagcaaggaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096405 567 - 72318688 cgtaac----aatacctgaccctgggcaatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggcagattagggcccagtctctctgctgcaaagatggcacctgaatgctgcagcctccagagaggaaggacattatatcttcacatggcagaa-------------------aaccca---ctctcacaagccctttttatag-agcattaatccattcttcgtgaactaaacagctttctcatttggccacatctcccaacactgttgcattggggg-tacgtttctagcacttggactttggggaacacaTTGAGACCACCGCAccctc----catctctttctccatatgaggacacagtgttcctttctttattgcctcttgcactatgtgaggattcagcaggagatatcatcttggaagcag-----agagtaagcccttcccagacacagca-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctctgtataaattactttatctgtggtattttgtgatagcagcaaggaca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 433480 568 - 1517660 cgtaac----aatacctgaccctgggtaatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggcagattagggcccagtctttctgctgcaaagatggcacctgaatgcggcagcctccagagaggaaggacattatatcttcacatggcagaa-------------------aaccca---ctctcaaaagccctttttatgg-agcattaatccattcttcgtgaactaaacagctttctcatttggccacacctcccaacactgttgcactgggga-tacgtttccagcacttggactttggggaacacgttgagaccaccgcaccctc----catctcttcctccacatgaggacacagtgttcatttctttatttcctcttccactgtgtgaggatgcagcaagagatgtcatcttggaagcag-----agagtaagccctccccagacacagcattctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataaatttctgctctgtataaattactttatctatggtattttgtgatagcagcaaggaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3529561 566 + 6513552 cgtaac----aatacctgaccctgggtaatttataatgaatggaaatttatttcctcaaagttttggaggctgggaaggccaaggtcaaggtgctggcagattagggcccagtctctctgctgcaaagatggcacctgaatgctgcagcctccagagaggaaggacattatatctttacatggtagaa-------------------aactca---ctctcacaagccctttttatag-agcattaatccattcttcgtgaactaaacagctttctcatttggccacacctcccgacactgttgcattgagga-tacgtttccagcacttggtctttggggaacaca-TGAGACCACCGCgccctc----catcccttcctccacatgaggacacagtgttcatttctttattgcctcttccactatgtgaggattcagcaagagatatcaccttggaaacag-----agagtaagccatccccagacacagca-tctgctggcaccttgatcctggaatttcctgccttgagaactctgagaaataagtttctgctctgtataaattactttatctgtggtattttgttatagcagcaaggaca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300140 585 + 117903854 tgtaacag--agtagctgaccctggataatttataatgaacagaaatttatttcctcacagttctggaggctggtaagtccaagatcaaggtgctggcagattagggtccagactctcgtcttcaaagatggcacctgaatgctgcaacctccagagaggaaggtcattatgtcctcacatggcagaaaagag--ggagaaagagagaacctattattcccacaagccctttttatag-catattaatccattcttca-----taaagagctttctcatttggccacacctccaaacatgattgcattggggattacatttccaacacatggattttgggaaacaagttgggaccatagcatcttt----catctcttcctccacatgaggacgcagtgtccatttctttattgccccttccactctgtgaggattcagcaagagatatcatcttggaagcag-----agaataagccctcttcagactcagaa-cctgctggcaacttgatcttgaaatttcttgccttgagaactctaagaaataaatttctgctatataaaaattactttatctgtggtattttgttatagtggcaagaaca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19486965 585 - 31320352 tgtaacag--aagaactcaccctggataatttataatgaacagaaatttatttcctcacagttctggaaactggtatgtccaagatcaaggtgctggcagattagggtccagactctcttcttcaaagatggcacctgaatgctgcgaccaccagagaggaaggtcattatgtcctcacatggcagaaaggag--cgagaaagagagaaccgattgttcccacaagccctttttatag-cacattaatccattcttcg-----taaagagctttctcatttggccacaccttcaaacactattgcattggggattacatttccaacacttggattttggggaacacgttgggaccatagcatcttt----catctcttcctccacataaggacacagtgtccatttcttcattgtcccttccactctgtgaggattcagcaagagatatcatctgggaagcag-----agagtaagccctcccgagacacagaa-tctgctggcaacttgatcttggaatttcctgccttaagaactctaagaagtaaatttctgctatatataaattactttatctgtggtattttgttatagtggcaagaaca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1682781 585 + 2203405 tgtaacag--aatagctgaccctggataatttataatgaccagaaatttatttcctcatggttctggagactggtacgtccaagatcaaggtgctggcagattagggtccagactctcttcttcaaagatggcacctgaatgctgcaacttccagagaggaaggtcattatgtcctcacatggcagaaaagag--ggagaaagagagaacctattattcccacaagccctttttgtag-cacattaatccattcttca-----taaagaactttctcctttggccacacctccaaacactattgcattgtggattacatttccaacacttggattttggggaacacattaggaccatagtatcttt----catctcttcctccacatgaggacacagtgtccatttctttattgccccttccactctgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacacagaa-cctgctggcaacttgatcttggaatttcctgccttgagaactctaagaaataaatttctgctatatataaattactttatttgtggtattttgttatagtggcaagaaca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635306 585 - 14941987 tgtaacag--aatagctgaccctggataatttataatgaacagaaatttatttcctcacagttctggaggctggtaagtccaagatcaaggtgctggcagattagggtccagactctcttcttcaaagatggcacctgaatgctgcaacctccagaaaggaaggtcattatgtcctcacatggcagaaaaggg--ggagaaagagagaacctattattctcacaagccctttttataa-cacattaatccattcttca-----taaagagcgttctcatttggccacacctccaaatgctattgcattgaggattacatttccaacacttggattttggggaacacgttgggaccatagcgtcttt----catctcttcctccacgtgaggacacagtgtccatttctttattgccccttccactctgtgaggattcagcaagagatatcatcttggaagcag-----agagtaagccctccccagacacagaa-cctgctggtaacttgatcttggaatttcctgccttgagaactctaacaaataaatttctgctatatataaattactttatctgtggtattttgttataatggcaagaaca i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1290187 590 - 1406956 tataacag--aatgcctgaaactgggtaatttaaaaagaacagaaatttatttcctcacagttctggaggttgggaagtctaagatcaaggtgctggcaggttagggccaggtctctctgctttgaggatgatgcgtgaacactgcatcctccagaggggaggaatgcaatgtcctcacataacagaaaagcaagagagagagggagaatcca---cctctataagccctttttatagcaatgttaatccattcctcatgacctgaatacctctcccattaggccctacctccccacattgttgcattgagaattgaatttctaacacatgaattgtagggaacacattcagaccatagcaacttc----cgtctctttgtccatatgaaaacacagtattcatagcttttttgccccttctaccatgtgaagatgcagagagattcactgtcttagaagcag-----agagtaagccctcaccacacataggc-tctgctagcaccttggacttggactttcctgcctccagaattgtgagaaataaatttctactatgtataaattactcagtctgtggtattttgatagggcagGGGGGATA i proCoq1.NW_012148742v1 I 576 I 45 s otoGar3.GL873546 11261214 595 - 20685099 tataacagcaaataactg-acctggttaatttataaacaatagaaatgtatttcctcacagtactggaggctgagaaattcaagatcagggtgctggcaggctagggcctggtctcgatgtttcagagatgatgtgtgaacaaggcatcccccagaggggtggaacgcagtatactcagatagcagaagaaca--agagagatggaagaccca---cttcctcaagcccttttcataccagcatcaatccatttctcacgtcctgaatatttcccccgttaatccctacctcccaatactactgcattgagaattaagtttctgaaacatgaattttggggaacatattcagaccacagcactttcccttcatctc-ttgctcgtgtgagaacacagtattcataccttttttgctcctttcattgtgtg-agatgcaacaaggttcactgtgtgggaaccagctggaagagtgagcctgcactcgacagagac-tctgttagcaccttgaacttgcactttcctgcctccagagttgtaagaaataaatttctactctatataagttactctgtctgtggcattttaatagggca-gTGGGACA i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e dasNov3.JH575754 515002 3 - 2150887 I e canFam3.chr1 112339949 0 - 122678785 C a score=201676.000000 s hg38.chr18_GL383571v1_alt 167648 19 + 198278 gactaagacaCTAGCTTTC s panTro5.chr18 65077554 19 + 78221452 gactaagacaCTAGCTTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196555 19 + 77229886 gactaagacaCTAGCTTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416062 19 + 17472758 gactaagacaCTAGCTTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456596 19 - 152096393 gactaagacaCTAGCTTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406240 19 + 70235451 gactaagataCTAGCTCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097551 19 - 75711847 gactaagataCTAGCTCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656827 19 - 18804593 gactaagataCTAGCTCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268705 19 + 18905526 gactaagataCTAGCTCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096972 19 - 72318688 gactaagataCTAGCTCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434048 19 - 1517660 gactaagataCTAGCTCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530127 19 + 6513552 gactaagataCTAGCTCTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300725 19 + 117903854 gactaagacaCTAGCTCTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487550 19 - 31320352 gactaagacaCTAACTCTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683366 19 + 2203405 gactaagacaCTAGCTCTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635891 19 - 14941987 gactaagacaCTAGCTCTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11261809 13 - 20685099 ------GACACCAGCTCTA i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1290777 45 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I e canFam3.chr1 112339949 0 - 122678785 C a score=-3568.000000 s hg38.chr18_GL383571v1_alt 167667 1 + 198278 T s panTro5.chr18 65077573 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196574 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416081 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456615 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406259 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097570 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656846 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268724 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096991 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434067 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530146 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300744 1 + 117903854 C i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487569 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683385 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635910 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11261822 1 - 20685099 A i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339949 1 - 122678785 C i canFam3.chr1 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1290777 45 - 1406956 I e dasNov3.JH575754 515002 3 - 2150887 I a score=383548.000000 s hg38.chr18_GL383571v1_alt 167668 31 + 198278 CT-AATTTATTCACAGATGACTTTTTGTTGTT s panTro5.chr18 65077574 31 + 78221452 CT-AATTTATTCACAGATGACTTTTTGTTGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196575 31 + 77229886 CT-AATTTATTCACAGATGACTTTTTGTTGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416082 31 + 17472758 CT-AATTTATTCACAGATGACTTTTTGTTGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456616 31 - 152096393 CT-AATTTATTCACAGATGACTTTTTGTTGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406260 31 + 70235451 CT-AATTTATTCACAGATGACTTTTTGTTGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097571 31 - 75711847 CT-AATTTATTCACAGATGACTTTTTGTTGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656847 31 - 18804593 CT-AATTTATTCACAGATGACTTTTTGTTGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268725 31 + 18905526 CT-AATTTATTCACAGATGACTTTTTGTTGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60096992 31 - 72318688 CT-AGTTTATTCACAGATGACTTTTTGTTGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434068 31 - 1517660 CT-AATTTATTCACAGATGACTTTTTGTTGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530147 31 + 6513552 CT-AATTTATTCACAGATGACTTTTTGTTGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300745 31 + 117903854 CT-AATTTATTCACAGATGACTTTTTGCTGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487570 30 - 31320352 CT--ATTTATTCACAGATGACTTTTTGTTGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683386 31 + 2203405 CT-AATTTATTCACAGATGACTTTTTGTTGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635911 31 - 14941987 CT-CATTTATTCACAGATGACTTTTTGTTGTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11261823 29 - 20685099 CTTAAATTATTTGCAGGTAGCTTTCTGTT--- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339950 28 - 122678785 CC-ACTTAGTTCACACATGGCTTTCTGTT--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 515005 28 - 2150887 CT-GATTCATTCGCAGATGGCTTCCTGTT--- i dasNov3.JH575754 I 3 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I e proCoq1.NW_012148742v1 1290777 45 - 1406956 I a score=269583.000000 s hg38.chr18_GL383571v1_alt 167699 22 + 198278 TACCAGCTACTGGCTCCATTTT s panTro5.chr18 65077605 22 + 78221452 TACCAGGTACTGGCTCCATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196606 22 + 77229886 TACCAGGTACTGGCTCCATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416113 22 + 17472758 TACCAGGTACTGGCTCCATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456647 22 - 152096393 TACCAGGTACTGGTTCCATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406291 22 + 70235451 TACCAGGTACTGGGTCCATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097602 22 - 75711847 TACCAGGTACTGGGTCCATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656878 22 - 18804593 TACCAGGTACTGGGTCCATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268756 22 + 18905526 TACCAGGTACTGGGTCCATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097023 22 - 72318688 TACCAGGTACTGGGTACATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434099 22 - 1517660 TACCAGGTACTGGGTCCATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530178 22 + 6513552 TACCAGGTACTGGGTCCATTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300776 22 + 117903854 TACCAGATATGGTGTTCATTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487600 22 - 31320352 TACCAGATATGGGGTTCATTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683417 22 + 2203405 TACCAGATATGGGGTTCATTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635942 22 - 14941987 TACCAGATATGGGGTTCATTTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1290822 22 - 1406956 TACCAGTTGATGAGTCCACTTC i proCoq1.NW_012148742v1 I 45 C 0 s otoGar3.GL873546 11261852 22 - 20685099 TATCTGGCGCTGGGTCTAGTTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112339978 22 - 122678785 TACCAGGTACTGGATCTGTTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 515033 22 - 2150887 TACCTTGTACCCAGTTCATTTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41549351 1247 + 83067054 I e mm10.chr1 111867861 174 + 195471971 I a score=379116.000000 s hg38.chr18_GL383571v1_alt 167721 25 + 198278 TCTTCATTTGACCTAAAATACTTCT s panTro5.chr18 65077627 25 + 78221452 TCTTCATTTGACCTAAAATACTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196628 25 + 77229886 TCTTCATTTGACCTAAAATACTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416135 25 + 17472758 TCTTCATTTGACCTAAAATACTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456669 25 - 152096393 TCTTCATTTGACATAAGATACTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406313 25 + 70235451 TCTTCATTTGACCTAAGACACTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097624 25 - 75711847 TCTTCATTTGACCTAAGACACTTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656900 25 - 18804593 TCTTCATTTGACCTAAGACACTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268778 25 + 18905526 TCTTCATTTGACCTAAGACATTTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097045 25 - 72318688 TCTTCATTTGACCTGAGACACTTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434121 25 - 1517660 TCTTCATTTGACCTAAGACACTTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530200 25 + 6513552 TCTTCATTTGACCTAAGACACTTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105300798 25 + 117903854 TCTTCGTTTGACCTAAGACACttct i calJac3.chr13 C 0 I 311 s saiBol1.JH378121 19487622 25 - 31320352 TCTTCATTTGACCTAAGACACTTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683439 25 + 2203405 TCTTCATTTGACCTAAGACACTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635964 25 - 14941987 TCTTCATTTGACCTAACACACTTCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550598 25 + 83067054 TCTTCACTTGACTTAGGACACTCCT i micMur3.chr19 I 1247 C 0 s proCoq1.NW_012148742v1 1290844 25 - 1406956 TCTTCACTTGATCTAGGAAACTCCT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11261874 24 - 20685099 TCTCAACTTGA-CTAGGACACTCGT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340000 25 - 122678785 TCTTTGCTTGACCCAAGACATCCCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 515055 25 - 2150887 TCTTTCCTTGATTTAGGATACTTCT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111867861 174 + 195471971 I a score=292143.000000 s hg38.chr18_GL383571v1_alt 167746 20 + 198278 AAACCTAGCTGTCTCAGCTC s panTro5.chr18 65077652 20 + 78221452 AAACCTAGCTGTCTCAACTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196653 20 + 77229886 AAACCTAGCTGTCTCAACTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416160 20 + 17472758 AAACCTAGCTGTCTCAGCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456694 20 - 152096393 AAACCCAGCTGTCTCAGCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406338 20 + 70235451 AAACCCAGCTGTCTCACCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097649 20 - 75711847 AAACCCAGCTGTCTCACCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656925 20 - 18804593 AAACCCAGCTGTCTCACCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268803 20 + 18905526 AAACCCAGCTGTCTCACCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097070 20 - 72318688 AAACCCAGCTGTCtcacctc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434146 20 - 1517660 AAACCCAGCTGTCTCACCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530225 20 + 6513552 AAACCCATCTGTCTCACCTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301134 20 + 117903854 GAATCCAGCATTCTCACCTA i calJac3.chr13 I 311 C 0 s saiBol1.JH378121 19487647 19 - 31320352 -AACCCAGCTGTCTCACCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683464 19 + 2203405 -AACCCAGCTGTCTCACCTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3635989 19 - 14941987 -AACCCAGCTGTCTCACCTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550623 20 + 83067054 AAATCCAGCTGCCTCACCTC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1290869 20 - 1406956 AAATCCAGCTGCCTCACCTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11261898 20 - 20685099 AAACCCACCTGCCTCACTTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340025 20 - 122678785 AAGCCCAGCTTTCCCCCCAC i canFam3.chr1 C 0 I 4 s dasNov3.JH575754 515080 20 - 2150887 ATACCCAGTTGTCTTACCTC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111867861 174 + 195471971 I a score=61415.000000 s hg38.chr18_GL383571v1_alt 167766 4 + 198278 TTAT s panTro5.chr18 65077672 4 + 78221452 TTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196673 4 + 77229886 TTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416180 4 + 17472758 TTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456714 4 - 152096393 TTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406358 4 + 70235451 TTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097669 4 - 75711847 TTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13656945 4 - 18804593 TTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268823 4 + 18905526 TTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097090 4 - 72318688 ttat i chlSab2.chr18 C 0 I 299 s manLeu1.NW_012106698v1 434166 4 - 1517660 TTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530245 4 + 6513552 TTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301154 4 + 117903854 TTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487666 4 - 31320352 TCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683483 4 + 2203405 TTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636008 4 - 14941987 TTAT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550643 4 + 83067054 TTAT i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1290889 4 - 1406956 TTAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11261918 4 - 20685099 TTAC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111868035 4 + 195471971 TTTT i mm10.chr1 I 174 C 0 s canFam3.chr1 112340049 4 - 122678785 AAAT i canFam3.chr1 I 4 C 0 s dasNov3.JH575754 515100 4 - 2150887 TTAG i dasNov3.JH575754 C 0 C 0 a score=1513422.000000 s hg38.chr18_GL383571v1_alt 167770 102 + 198278 AAAAACTTGAGCTATGCCTAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTCTTTTTGGGTTATCAGAAATGCCCTTC s panTro5.chr18 65077676 102 + 78221452 AAAAACTTGAGCTATGCCTGC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTTTTTTTTTGGGTTATCAGAAATGCCCTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196677 101 + 77229886 AAAAACTTGAGCTATGCCTGC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGT-TTTTTTTGGGTTATCAGAAATGCCCTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416184 102 + 17472758 AAAAACTTGAGCTATGCCTAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTTGGGTTATCAGAAATGCCATTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456718 102 - 152096393 AAAAACTTGAGCTATGCCTAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTTTTTTTTTGGGTTATCAGAAACGCCCTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406362 102 + 70235451 AAAAACTTGAGCTGTGCCTAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTTGGGTTATCAGAAATGCCCTTC i rheMac8.chr18 C 0 I 6 s macFas5.chr18 63097673 102 - 75711847 AAAAACTTGAGCTGTGCCTAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTTGGGTTATCAGAAATGCCCTTC i macFas5.chr18 C 0 I 6 s macNem1.NW_012016688v1 13656949 102 - 18804593 AAAAACTTGAGCTGTGCCTAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTTGGGTTATCAGAAATGCCCTTC i macNem1.NW_012016688v1 C 0 I 6 s cerAty1.NW_012001075v1 13268827 102 + 18905526 AAAAACTTGAGCTGTGCCGAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTCGGGTTATCAGAAATGCCCTTC i cerAty1.NW_012001075v1 C 0 I 6 s chlSab2.chr18 60097393 102 - 72318688 aaAAACTTGAGCTGTGCCTAC-AGGCATAATTGGCACTAAACTAATTACTACCAAATAATATTTGGCATGATGTGTTTTTTCGGGTTATCAGAAATGCCCTTC i chlSab2.chr18 I 299 I 6 s manLeu1.NW_012106698v1 434170 102 - 1517660 AAAAACTTGAGCTGTGCCGAC-AGGCATAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTCGGGTTATCAGAAATGCCCTTC i manLeu1.NW_012106698v1 C 0 I 6 s colAng1.NW_012115433v1 3530249 102 + 6513552 AAAAACTTGAGCTGTGCCTAC-AGGCGTAATTGGCAGTAAACTAATTACTACCAAATAATATTTGGAATGATGTGTTTTTTTGGGTTATCAGAAATGCCCTTC i colAng1.NW_012115433v1 C 0 I 6 s calJac3.chr13 105301158 103 + 117903854 AAAAGCTTGAGCTATGCCTGTAAGGCATAATTGGCAGTAAACTAACTACTACCAAATAACATTTAGACTGATGTGTCTTTTAGGGTTATTCGAAACACTCTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487670 102 - 31320352 AAAAGCTTGAGCTATGCCTAT-AGGCATAATTTGCAGTAAACTGACTACTGCCAAATAATATTTAGAATGATGTGTCTTTTAGGATTATTCGGAATACCCTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683487 102 + 2203405 AAAAGCTTGAGCTATGCCTAT-AGGCATAATTGGCAGTAAACTAACTACTGCCAAATAATATTTAGAATGATGTGTCTTTTAGAATTATTTGAAACACCCTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636012 102 - 14941987 AAAAGCTTGAGCTATGCCTAT-AGGCATAATTGGCAGTAAACTAACTACTACCAAATAATATTTAGAATGATGTATCTTTTAGGATTATTCGAAACACCCTTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550647 103 + 83067054 AAAATCTTGTGCTCTGCCTACAAGGCATAACTGGCAGTAAGCCAATTACTGCCAAGTAATAATTGGAATAATGTGACTTTGATGGTTATCAGAAATGCCCTTC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1290893 103 - 1406956 AAAATCTTGGGCTCTGCCTACAAGGTATAACTGGCAGTAAGCCAATTACTGCCAAGTAATAATTGGAATAATGTGGCTTTGATGGTTATCAGAAATGCACTTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11261922 91 - 20685099 AAAAACATGC------------AGGCATAACTTACAGTAAGCCAATTTCTGTCATGTGATAGTTGGAATGATGTGACTTTGATGGTTATCAAAAATGCCCTTC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111868039 101 + 195471971 AAAAGTGTAAGGTATACCTGT-AGTCAAGACTGTCAATAAACAAATACCTACCAAATAACAGTGAGAGTGGTGTGACATTTCGGGTT-TTAGAAATACTCTTC i mm10.chr1 C 0 I 2216 s canFam3.chr1 112340053 100 - 122678785 AAGAGCCTGGGCTGGACTTCC-AGACACAAGTGGCAGTAAGTCAATTACTACAATACAATAAGAGGGA-AATATGGCTTT-AGGGTTGTGAGAAACCCCCCTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 515104 101 - 2150887 TAAAGTCTAGGCTATGCCTTC-AGGCAGAACTGGCAATAAAC-AATTGTTATAAACTAATCATGGGAATGATGTGATTTTTAGGGATATCAGCAATGCCCTTC i dasNov3.JH575754 C 0 C 0 a score=172494.000000 s hg38.chr18_GL383571v1_alt 167872 12 + 198278 TGATGTT-AATAA s panTro5.chr18 65077778 12 + 78221452 TGATGTT-AATAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196778 12 + 77229886 TGATGTT-AATAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416286 12 + 17472758 TGATGTT-AATAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456820 12 - 152096393 TGATTTT-AATAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406470 12 + 70235451 TGATGTT-AATAA i rheMac8.chr18 I 6 C 0 s macFas5.chr18 63097781 12 - 75711847 TGATGTT-AATAA i macFas5.chr18 I 6 C 0 s macNem1.NW_012016688v1 13657057 12 - 18804593 TGATGTT-AATAA i macNem1.NW_012016688v1 I 6 C 0 s cerAty1.NW_012001075v1 13268935 12 + 18905526 TGATGTT-AATAA i cerAty1.NW_012001075v1 I 6 C 0 s chlSab2.chr18 60097501 12 - 72318688 TGATGTT-AATAA i chlSab2.chr18 I 6 C 0 s manLeu1.NW_012106698v1 434278 12 - 1517660 TGATGTT-AATAA i manLeu1.NW_012106698v1 I 6 C 0 s colAng1.NW_012115433v1 3530357 12 + 6513552 TGATGTT-AATAA i colAng1.NW_012115433v1 I 6 C 0 s calJac3.chr13 105301261 12 + 117903854 TGATATT-AATAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487772 12 - 31320352 TGATATT-AATAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683589 11 + 2203405 TGATATT-AAC-A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636114 12 - 14941987 TGATATT-AATAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550750 12 + 83067054 TGATGTT-AATAA i micMur3.chr19 C 0 I 156 s proCoq1.NW_012148742v1 1290996 12 - 1406956 TGGTGTT-AATAA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11262013 13 - 20685099 TGATTTTAAATGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340153 11 - 122678785 TGATGTT-AAAA- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 515205 12 - 2150887 TGATGTT-AAGAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111868140 2216 + 195471971 I a score=8443.000000 s hg38.chr18_GL383571v1_alt 167884 1 + 198278 G s panTro5.chr18 65077790 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196790 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416298 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456832 1 - 152096393 G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406482 1 + 70235451 G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097793 1 - 75711847 G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657069 1 - 18804593 G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268947 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097513 1 - 72318688 G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434290 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530369 1 + 6513552 G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301273 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487784 1 - 31320352 G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683600 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636126 1 - 14941987 G i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1291008 1 - 1406956 A i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11262026 1 - 20685099 C i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340164 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 515217 1 - 2150887 G i dasNov3.JH575754 C 0 I 5969 e micMur3.chr19 41550762 156 + 83067054 I e mm10.chr1 111868140 2216 + 195471971 I a score=152165.000000 s hg38.chr18_GL383571v1_alt 167885 14 + 198278 AGAATGTCATTTTA s panTro5.chr18 65077791 14 + 78221452 AGAATGTCATTTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196791 14 + 77229886 AGAATGTCATTTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416299 14 + 17472758 AGAATGTCATTTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456833 14 - 152096393 AGAATGTCCTTTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406483 14 + 70235451 AGAATGTCCCTTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097794 14 - 75711847 AGAATGTCCCTTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657070 14 - 18804593 AGAATGTCCCTTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268948 14 + 18905526 AGAATGTCCCTTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097514 14 - 72318688 AGAATGTCCCCTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434291 14 - 1517660 AGAATGTCCCTTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530370 14 + 6513552 AGAATGTCACTTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301274 14 + 117903854 AGAATGTCCTTTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487785 14 - 31320352 AGAATGTCCTTTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683601 14 + 2203405 AGAATGTCCTTTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636127 14 - 14941987 AGAATGTCCTTTTA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1291009 14 - 1406956 AGCATACCCTGTTA i proCoq1.NW_012148742v1 C 0 I 99 s otoGar3.GL873546 11262027 14 - 20685099 AGCACACCCCCTAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340165 14 - 122678785 ACCACATCCCTTCG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41550762 156 + 83067054 I e mm10.chr1 111868140 2216 + 195471971 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=934244.000000 s hg38.chr18_GL383571v1_alt 167899 90 + 198278 --CCCACAACCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCAGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAGTTCTT s panTro5.chr18 65077805 90 + 78221452 --CCCACAACCCCCGTACATAT-------CATACACCCCAATTACCT---TTACTATCAGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAGTTCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196805 90 + 77229886 --CCCACAACCCCCGTACATAT-------CATACACCCCAATTACCT---TTACTATCAGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAGTTCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416313 90 + 17472758 --CCCACAACCCCCGTACATAT-------CATGCACCCCAATTACCT---TTACTATCAGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAGTTCTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456847 90 - 152096393 --CCCACCATCCCCGTACATAT-------CACGCACCCCAATTACCC---TTACTATCTGATTTATTTCCACTGGAACTgtgtttttcaaattacagttctt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406497 90 + 70235451 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAATTCTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097808 90 - 75711847 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAATTCTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657084 90 - 18804593 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAATTCTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13268962 90 + 18905526 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAATTCTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097528 90 - 72318688 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTGATTTCCACCGGAACAGTGTTTTTCAAATTACAATTCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434305 90 - 1517660 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTTATTTCCATTGGAACAGTGTTTTTCAAATTACAATTCTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530384 90 + 6513552 --CCCCAAATCCCTGTACATAT-------CATGCACCCCAATTACCT---TTACTATCTGATTTATTTCCACTGGAACAGTGTTTTTCAAATTACAGTTCTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301288 88 + 117903854 --CCTCCAACCCACTT-CATGT-------CAAACACCCCAATTACCT---TTACTATCTGATT-ATTTCCACTGGAAcagcgtttttcaaattgcagttttt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487799 89 - 31320352 --CCTCCAACCCCCTTACATAT-------CAAACATCCCAATTACCT---TTAGTATCTGATT-ATTTCCACTGTAAcagtgtttttcaaattgtcattttt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683615 89 + 2203405 --CCTCCAACCCCCTTACATAT-------CAAACATCCCAATTACCT---TTACTATCTGATT-ATTTCCACTGGAACAGTGTTTTTCAAATTGCAATTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636141 89 - 14941987 --CCCCCAACCCCCTTACATAT-------CAAACACCCCAATTACCT---TTACTATCTGATT-ATTTCCACTGGAACAGTGTTTTTCAAATTGCAATTTTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11262041 84 - 20685099 --CTCCCAGGCCCC-TACATAT------------ACATCATCCAACT---TTATTATCTGATTTCTTTCCTCTAGGACAGTGTTTTTCATACTAAAATTATT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340179 101 - 122678785 CACCACACAGACACATACACATGCATACATGCACACCCCAAGCACCTTTATTATTATCTGAAATGTTTCCTCTAGGACAATG-CTTTCAAATTAAAATTCTT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41550762 156 + 83067054 I e mm10.chr1 111868140 2216 + 195471971 I e proCoq1.NW_012148742v1 1291023 99 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=252749.000000 s hg38.chr18_GL383571v1_alt 167989 20 + 198278 AGACTACCAGT--ATCAGAAAG s panTro5.chr18 65077895 20 + 78221452 AGACTACCAGT--ATCAGAAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196895 20 + 77229886 AGACTACCAGT--ATCAGAAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416403 20 + 17472758 AGATTACCAGT--ATCAGAAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456937 20 - 152096393 agactaccagt--atcagaaag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406587 20 + 70235451 AGACTACCAGT--ATCAGAAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097898 20 - 75711847 AGACTACCAGT--ATCAGAAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657174 20 - 18804593 AGACTACCAGT--ATCAGAAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269052 20 + 18905526 AGACTACCAGT--ATCAGAAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097618 20 - 72318688 AGACTACCAGT--ATCAGAAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434395 20 - 1517660 AGACTACCAGT--ATCAGAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530474 20 + 6513552 AGACTACCAGT--ATCAGAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301376 20 + 117903854 agaataccagt--atcagaaag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487888 20 - 31320352 agaatactagt--accataaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683704 20 + 2203405 AGAATACCAGT--ATCAGAAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636230 20 - 14941987 AGAATACCAGT--ATCAGAAAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1291122 20 - 1406956 agactaccagc--atcagaaag i proCoq1.NW_012148742v1 I 99 C 0 s otoGar3.GL873546 11262125 20 - 20685099 AGTCTACTAAC--ATCAAAATG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112340280 21 - 122678785 -AAACCCCTGTAGATCAGAAAG i canFam3.chr1 C 0 I 196 e micMur3.chr19 41550762 156 + 83067054 I e mm10.chr1 111868140 2216 + 195471971 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=340411.000000 s hg38.chr18_GL383571v1_alt 168009 30 + 198278 TTCATGGTGCTATTAAAAATGTCAATTATC- s panTro5.chr18 65077915 30 + 78221452 TTCATGGTGCTATTAAAAATGTCAATTATC- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196915 30 + 77229886 TTCATGGTGCTATTAAAAATGTCAATTATC- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416423 30 + 17472758 TTCATggtgctattaaaaatgtcaattatc- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456957 30 - 152096393 ttcatggtgctattaaaaatgtcaattatc- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406607 30 + 70235451 TTCATGGTGCCGTTAAAAATGTCAATTATC- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097918 30 - 75711847 TTCATGGTGCCGTTAAAAATGTCAATTATC- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657194 30 - 18804593 TTCATGGTGCCGTTAAAAATGTCAATTATC- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269072 30 + 18905526 TTCATGGTGCCGTTAAAAATGTCAATTATC- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097638 30 - 72318688 TTCATAGTGCCATTAAAAATGTCAATTATC- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434415 30 - 1517660 TTCATGGTGCCGTTAAAAATGTCAATTATC- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530494 30 + 6513552 TTCATggtgccgttaaaaatgtcaattatc- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301396 30 + 117903854 ttcatggtgctgttaaaaatgacagttatc- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487908 30 - 31320352 ttcatggtgctgttaaaaatgacagttaac- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683724 30 + 2203405 TTCGTGGTGCTGTTAAAAATGACAGTTATC- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636250 30 - 14941987 TTCATGGTACTGTTAAAAATGACAGTTATC- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1291142 30 - 1406956 tccatggtgttattaaagacatcaatttct- i proCoq1.NW_012148742v1 C 0 I 1 s otoGar3.GL873546 11262145 22 - 20685099 TCCATGGTGTTGTTA--------ATTTTCT- i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112340497 31 - 122678785 ccCAGGGTGCTGTTTAAAATTCCAGTTTTTC i canFam3.chr1 I 196 C 0 e micMur3.chr19 41550762 156 + 83067054 I e mm10.chr1 111868140 2216 + 195471971 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=1110410.000000 s hg38.chr18_GL383571v1_alt 168039 76 + 198278 AAATCTGTCTCAGCCTTATGGATTAAGAATCTC--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGT---TCAAGTGCC s panTro5.chr18 65077945 76 + 78221452 AAATCTGTTTCAGCCTTATGGATTAAGAATCTC--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGT---TCAAGTGCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64196945 76 + 77229886 AAATCTGTTTCAGCCTTATGGATTAAGAATCTC--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGT---TCAAGTGCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416453 79 + 17472758 aaatctgtctcagccttatggattaagaatctc--agtgtgtaacctggtattctgtac-cttaaaatgttcctcaagtgcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139456987 79 - 152096393 aaatcagtctcagccttatggattaagaatctc--agtgtgtaacctgatattctgtac-cttaaaatgttcctcaagtgCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406637 79 + 70235451 AAATCTGTCTCAGCCTTATGAATTAAGAATCTT--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGTTCCTCAAGTGCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63097948 79 - 75711847 AAATCTGTCTCAGCCTTATGAATTAAGAATCTT--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGTTCCTCAAGTGCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657224 79 - 18804593 AAATCTGTCTCAGCCTTATGAATTAAGAATCTT--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGTTCCTCAAGTGCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269102 79 + 18905526 AAATCTGTCTCAGCCTTATGAATTAAGAATCTT--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGTTCCTCAAGTGCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097668 79 - 72318688 AAATCTGTCTCAGCCTTATGAATTAAGAATCTC--AGTGTATAACCTGGTATTCTGTAC-CTTAAAATGTTCCTCAAGTGCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434445 79 - 1517660 AAATCTGTCTCAGCCTTATGAATTAAGAATCTT--AGTGTGTAACCTGGTATTCTGTAC-CTTAAAATGTTCCTCAAGTGCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530524 77 + 6513552 aaatc--tctcagccttatgaattaagaatctc--agtgtgtaacctggtattctgtac-cttaaaatgttcctcaagtgCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301426 78 + 117903854 aaatctgtctcagccttatggattaagaatctc--agtgcgt-acctggtattctatac-cttaaagtgttcctcaagtgcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19487938 79 - 31320352 aaatctgtctcagccttatggattaagaatctc--agtgcataacctgggattctatac-cttaaaatgtccctcaagcgcc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683754 79 + 2203405 AAATCTGTCTCAGCCTTATGGACTAAGAATCTC--AGTGTGTAACCTGGTATTCTATAC-CTTAAAATGTTCCTCAAGTGCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636280 79 - 14941987 AAATCTGCCTCAGCCTTATGGATTAAGAATCTC--AGTGTGTAACCTGGTATTCTATAC-CTTAAAATGTTCCTCAAGTGCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550918 79 + 83067054 aaatctatcctagccctatggattaagaatctc--aatgtgtgacctagtaatctacac-cttcaaatgttcctcaagcaca i micMur3.chr19 I 156 C 0 s proCoq1.NW_012148742v1 1291173 79 - 1406956 aaatctatcctagccctatggattaagaatctc--aatgtgtgacctagtaatctacac-cttcaaatgtttctcaagcacc i proCoq1.NW_012148742v1 I 1 C 0 s otoGar3.GL873546 11262168 78 - 20685099 AAATTTATCCCGGTCATATAGATTAAGAATCTC--AATATGTGACCTGGTAATCTGTAC-CTTAAAATG-TCCTCAAGCACC i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112340528 82 - 122678785 AAATCTGTcctagctctatggattaagaatctctgggtgtatggccctgtaatctgtacttttcaattgctgctgaggtgga i canFam3.chr1 C 0 C 0 e mm10.chr1 111868140 2216 + 195471971 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=693255.000000 s hg38.chr18_GL383571v1_alt 168115 51 + 198278 TAACAAATTTTGAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT s panTro5.chr18 65078021 51 + 78221452 TAACAAATTTTGAGAGTCACTGTTCGAACATA---GTTCTCATTCTTTTCTCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197021 51 + 77229886 TAACAAATTTTGAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416532 51 + 17472758 taacaaattttgagagtcactgTTCGAACATA---ATTCTCATTCTTTTCTCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457066 49 - 152096393 TAACAAATTTT--GAGTCACTGTTTGAACATA---ATTCTCGTTCTTTCCTCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406716 51 + 70235451 TAACACATTTTAAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098027 51 - 75711847 TAACACATTTTAAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657303 51 - 18804593 TAACACATTTTAAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269181 51 + 18905526 TAACACGTTTTAAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097747 51 - 72318688 TAACACATTTTAAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434524 51 - 1517660 TAACACGTTTTAAGAGTCACTGTTTGAACATA---ATTCTCATTCTTTTCTCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530601 51 + 6513552 TAACACATTTGAAGAGTCACTGTTCGAACATA---ATTCTCATTCTTTTCTCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301504 51 + 117903854 taacacattttgagagtcactgTTCAAATGGA---ATTCTCATTCTTTTCTCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488017 51 - 31320352 taacaaattttgagagtcactATTCAAATGTA---ATTCTCATTCTTTTCCCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683833 51 + 2203405 TAATAAATTTTGAGAGTCACTATTCAAATGTA---ATTCTCATTCTTTTCTCCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636359 51 - 14941987 TAACAAATTTTGAGAGTCACTATTCAAATGTA---ATTCTCATTCTTTTCTCCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41550997 51 + 83067054 taacaaactttgagtgtcactgTTCCAAGATA---ATTCTTATTCTTTTCTCCT i micMur3.chr19 C 0 I 26 s proCoq1.NW_012148742v1 1291252 51 - 1406956 taataaactttgagggtcattgTTCTAAGATA---ATTCTTATTCTTTTCTCCT i proCoq1.NW_012148742v1 C 0 I 88 s otoGar3.GL873546 11262246 36 - 20685099 TAG--------------CATTGCTCTAAGATA---ATTCTTGTTCTTTTCTCC- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870356 48 + 195471971 TAATAAACCT---GAGTCACTGAGTTATGATA---ATTTGCATTCATTTCTCTT i mm10.chr1 I 2216 C 0 s canFam3.chr1 112340610 51 - 122678785 caccgaattttgagagtcactgTTCTAAGGCATGCATTCTCATCTTTTTCT--- i canFam3.chr1 C 0 C 0 e dasNov3.JH575754 515218 5969 - 2150887 I a score=171669.000000 s hg38.chr18_GL383571v1_alt 168166 18 + 198278 TGCCACACACACCTGTGC------- s panTro5.chr18 65078072 18 + 78221452 TGCCACACACACCTGTGC------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197072 18 + 77229886 TGCCACACACACCTGTGC------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416583 18 + 17472758 TGCCACACACACCTGTGC------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457115 18 - 152096393 TGCCACACACACCTGTGC------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406767 18 + 70235451 TGCCACACACACCTGTGT------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098078 18 - 75711847 TGCCACACACACCTGTGT------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657354 18 - 18804593 TACCACACACACCTGTGT------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269232 18 + 18905526 TGCCACACACACCTGTGT------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097798 18 - 72318688 TGCCACACACATCTGTGT------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434575 18 - 1517660 TGCCACACACACCTGTGT------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530652 18 + 6513552 TGCCACACACACCTGTGT------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301555 17 + 117903854 TGCC-CACACACCAGTGT------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488068 17 - 31320352 TGCC-CATACACCAGTGT------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683884 17 + 2203405 TGCC-CACACACCAGTGT------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636410 17 - 14941987 TGCC-CACACACCAGTGT------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11262282 17 - 20685099 TACCCCCCACACCTGCG-------- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870404 17 + 195471971 -TCCATATGCATATGGGT------- i mm10.chr1 C 0 I 9 s canFam3.chr1 112340661 24 - 122678785 TGCC-CACACACCTGGGGAATGTCT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551048 26 + 83067054 I e proCoq1.NW_012148742v1 1291303 88 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=553899.000000 s hg38.chr18_GL383571v1_alt 168184 42 + 198278 CTGAGGGTTTGTTTGGCTACATAACAGAAACATTCTCAGGCT s panTro5.chr18 65078090 42 + 78221452 CTGAGGGTTTGTTTGGCTACATAACAGAAACATTCTCAGGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197090 42 + 77229886 CTGAGGGTTTGTTTGGCTACATAACAGAAACATTCTCAGGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416601 42 + 17472758 CTGAGGGTTTGTTTGGCTACATAACAGAAACATTCTCAGGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457133 42 - 152096393 CTGAGGGTTTGTTTGGCTACATAACAGAAACATTCTCAGGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406785 42 + 70235451 CTGAGGGCTTGTTGGGCTACGTAACAGAAACATTCTCAGGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098096 42 - 75711847 CTGAGGGCTTGTTTGGCTACGTAACAGAAACATTCTCAGGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657372 42 - 18804593 CTGAGGGCTTGTTTGGCTACGTAACAGAAACATTCTCAGGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269250 42 + 18905526 CTGAGGGCTTGTTTGGCTACGTACCAGAAACATTCTCAGGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097816 42 - 72318688 CTGAGGGCTTGTTTGGCTACATAACAGAAACATTCTCAGGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434593 42 - 1517660 CTGAGGGCTTGTTTGGCTACGTACCAGAAACATTCTCAGGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530670 42 + 6513552 CTGAGGGCTTGTTTGGCTACATAACAGAAACATTCTCAGGCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301572 42 + 117903854 CTGTGGGTTTGTTTGGCTACGTAACAGAAACAGTCTCAGTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488085 42 - 31320352 CTGAGGGTTTGTTTGGCTACATAACAGAAACATTCTCAGTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683901 42 + 2203405 CTGAGGGTTTGTTTGGCTACGTAACAGAAACATTCTCAGTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636427 42 - 14941987 CTGAGGGTTTGTTTGGCTATGTAACAGAAACATTCTCAGTCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41551074 42 + 83067054 CTGATGGTTTGTTTGGCTATGTAACAGAAACAACCTCAGGCT i micMur3.chr19 I 26 I 90 s otoGar3.GL873546 11262299 29 - 20685099 -------------TGTCTATGTAACAGAACCATCCTCAGGCT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870430 40 + 195471971 CTATGGATACATTTGGCCTGGTAACATCAACATCCTCATC-- i mm10.chr1 I 9 C 0 s canFam3.chr1 112340685 42 - 122678785 CTGAGGGTTTATTTGAATATGGGACTGCCACATCCCCAGGCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1291303 88 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=316819.000000 s hg38.chr18_GL383571v1_alt 168226 31 + 198278 GGCAGAAGCATAAGGACTGATTAGGATTAGG s panTro5.chr18 65078132 31 + 78221452 GGCAGAAGCATAAGGACTGATTAGGGTTAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197132 31 + 77229886 GGCAGAAGCATAAGGACTGATTAGGGTTAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416643 31 + 17472758 GGCAGAAGCATAAGGACTGATTAGGATTAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457175 31 - 152096393 GGCAGAAGCATAAGGACTGACTAGGGTTAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406827 31 + 70235451 GGCAGAAGCGTAAGGACTGACTAGGGTTAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098138 31 - 75711847 GGCAGAAGCGTAAGGACTGACTAGGGTTAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657414 31 - 18804593 GGCAGAAGCGTAAGGACTGACTAGGGTTAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269292 31 + 18905526 GGCAGAAGCGTAAGAACTGACTAGGGTTAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097858 31 - 72318688 GGCAGAAGCATAAAGACTGACTAGGGTTAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434635 31 - 1517660 GGCAGAAGCATAAGGACTGACTAGGGTTAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530712 31 + 6513552 GGCAGAAGCATAAGGACTGACTAGGGTTAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301614 31 + 117903854 GGCAGAAGCATAAGGACTAACTAGGGTTAGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488127 31 - 31320352 GGCAGAAGCATAAGGACTAACTAGGATTAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683943 31 + 2203405 GGCAGAAACATAAGGACTAACTAGGGTTAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636469 31 - 14941987 GGCAGAAGCATAAGGACTAACTAGGGTTAGG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11262328 19 - 20685099 GGCAG--------TGTCTAGCTAGGGT---- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870470 11 + 195471971 ACCAGAAGAGT-------------------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112340727 30 - 122678785 AACAGGAGCTCAGTGCCCACCTGGAGTAAG- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551116 90 + 83067054 I e proCoq1.NW_012148742v1 1291303 88 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=426299.000000 s hg38.chr18_GL383571v1_alt 168257 33 + 198278 AACTGGTGTTGCAGAATAACTCAGAAACATGTA s panTro5.chr18 65078163 33 + 78221452 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197163 33 + 77229886 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416674 33 + 17472758 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457206 33 - 152096393 AACTAGTGTTGCAGAATTACTCAGAAACATGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406858 33 + 70235451 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098169 33 - 75711847 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657445 33 - 18804593 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269323 33 + 18905526 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097889 33 - 72318688 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434666 33 - 1517660 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530743 33 + 6513552 AACTGGTGTTGCAGAATAACTCAGAAACATGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301645 33 + 117903854 AACTAATGTTGCAGAATAACTCAGAAACATGGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488158 33 - 31320352 AACTAATGTTGCAGAATAACTCAGAAACATGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1683974 31 + 2203405 AACTAATGTTGCAGAATAACTCAGAAACGTG-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636500 33 - 14941987 AACTAATGTTGCAGAATAACTCAGAAACATGTA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1291391 33 - 1406956 AACTAGTGTTGCAGAATAACTCAGGGACATGTA i proCoq1.NW_012148742v1 I 88 I 426 s otoGar3.GL873546 11262347 21 - 20685099 ------TGTAGAATAATAATTTAGGGA------ i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870481 32 + 195471971 AATTAGTTCTGACAAATTATTCAG-GACACTTA i mm10.chr1 C 0 C 0 s canFam3.chr1 112340757 33 - 122678785 AGTTGGTGTTGTGTAATAGCCCAGAGACACGTA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551116 90 + 83067054 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=376161.000000 s hg38.chr18_GL383571v1_alt 168290 37 + 198278 TGTAGCTATTT-TGCAGAACGTTTAATAGTCTTGCCTT s panTro5.chr18 65078196 37 + 78221452 TGTAGCTATTT-TGCAGATAGTTTAATAGTCTTGCCTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197196 37 + 77229886 TGTAGCTATTT-TGCAGATAGTTTAATAGTCTTGCCTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416707 37 + 17472758 TGTAGCTATTT-TGCAGATAGTTTAACAGTCTTGCGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457239 37 - 152096393 TGTAGCTATTT-TGCAGCTAGTTTAATAGTCTTACGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406891 37 + 70235451 TGTAGCTATTT-TGTAGCTAGTTTAGTAGTCTTATGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098202 37 - 75711847 TGTAGCTATTT-TGTAGCTAGTTTAATAGTCTTATGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657478 37 - 18804593 TGTAGCTATTT-TGTAGCTAGTTTAATAGTCTTATGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269356 37 + 18905526 TGTAGCTATTT-TGTAGCGAGTTTAATAGTCTTATGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097922 37 - 72318688 TGTAGCTATTT-TGTAGCTAGTTTAATAGTCTTATGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434699 37 - 1517660 TGTAGCTATTT-TGTAGCGAGTTTAATAGTCTTATGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530776 37 + 6513552 TGTAGCTATTT-TGTAGCTAGTTTAATAGTCTTATGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301678 37 + 117903854 TGTAGCTACTT-TGCAGCTAGTTTAATTGTCTTACACT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488191 37 - 31320352 TGTAGCTACTT-TGCAGCTGGTTTAATTGTCTTACATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684005 37 + 2203405 TGTAGCTTCTT-TGCAGCTAGTTTAATTGTCTGATGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636533 37 - 14941987 TGTAGCTACTT-TGCAGCTAGTTTAATTGTCTTACGTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11262368 34 - 20685099 ---ACCTATTT-TGTTGTTAGTTTGATTATTTTATATG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870513 33 + 195471971 AGAAGTTGGGT-TGCAACTAGTTTA----TCTTACATG i mm10.chr1 C 0 C 0 s canFam3.chr1 112340790 38 - 122678785 AGTAGCTTCTTCTGCGGCTGGCTTGACTATTTTGCATG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551116 90 + 83067054 I e proCoq1.NW_012148742v1 1291424 426 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=1411725.000000 s hg38.chr18_GL383571v1_alt 168327 114 + 198278 TAAATTATTTATTCACATGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAATGAAA s panTro5.chr18 65078233 114 + 78221452 TAAATTATTTATTCACATGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAATGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197233 114 + 77229886 TAAATTATTTATTCACATGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAATGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416744 114 + 17472758 TAAATTGTTTATTCACATGTGAGGAAGTGAGATATTGG----AGTCAAGCAATAAAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACCATGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457276 114 - 152096393 TAAATTGTTTATTCACATGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAATGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57406928 114 + 70235451 TAAATTATTTATTAACGTGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATGTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAGTGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098239 114 - 75711847 TAAATTATTTATTAACGTGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATGTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAGTGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657515 114 - 18804593 TAAATTATTTATTAACGTGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATGTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAATGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269393 114 + 18905526 TAAATTATTTATTAACATGTGAGGAAGTGAGATATTAG----AGTCAAGCCATAAAGGCAAATAAGATGTATaaaacagaaaaga--gaaaaaag-tgaatacaacctagaaacaatgaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60097959 114 - 72318688 TAAATTATTTATTAACATGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATGTATAAAACAGAAAAGA--GAAAAAAA-CGAATACAACCTAGAAACAATGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434736 114 - 1517660 TAAATTATTTATTAACATGTGAGGAAGTGAGATATTAG----AGTCAAGCCATAAAGGCAAATAAGATGTATaaaacagaaaaga--gaaaaaag-tgaatacaacctagaaacaatgaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530813 114 + 6513552 TAAATTATTTATTAACGTGTGAGGAAGTGAGATATTAG----AGTCAAGCAATAAAGGCAAATAAGATGTATAAAACAGAAAAGA--GAAAAAAA-TGAATACAACCTAGAAACAATGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301715 113 + 117903854 TAAATTGTTTGTTCATATGTGAGGGAGCAAGGTAGTAG----AGTTAACCAATAGAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAA--GAATACAACCTAGAAACACTGAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488228 113 - 31320352 TAAATTGTTTGTTCATATGTGAGGGAGTGAAGTAGTAG----AGTTAACCAATACAGGCAAATAAGATTTATAAAACAGAAACAA--GGAAAAAA--AAATACAACCTAGAAACACTGAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684042 115 + 2203405 TAAATTGTTTATTCACATGTGAGGGAGTAAGGTAGTAG----AGTTAACCAATAAAGGCTAATAAGATTTATAAAACAGAAAAGA--GAAAAAAAATGAATACAACCTAGAAACACTGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636570 115 - 14941987 TAAATTGTTTATTCACATGTGAGGAAGTGAGGTAGTAG----AGTTAACCAATAAAGGCAAATAAGATTTATAAAACAGAAAAGA--GAAAAAAAATGAATACAACCTAGAAACACTGAAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41551206 120 + 83067054 TAAATTGTTTATTCACATATGAGGGAGTGAGATGGTAGATACAGTTAAGCAATAAAGGTAAATAGAATTTATAAGACATAAAAGATGAAAAAAAA-TGAACACAACCTAGGAACAATGAAA i micMur3.chr19 I 90 I 764 s otoGar3.GL873546 11262402 116 - 20685099 TAAATTTTTTGTTCACATAGGAGAAAGTGAGGTGGTAGACAGAGTTAAGCAATAAAGGTAACC--AATTTATGAGACAAAAAAGA--GAAAAAAA-TGAACACAACCTAGAAACAATGAAA i otoGar3.GL873546 C 0 I 5 s mm10.chr1 111870546 101 + 195471971 TAAATTGTT------CATGTAAAGAAATCTGTTGGTGAGT--AGCAAAATATAAATGGTACCTGATATTTTGAAAA-----------TAATAAAA-TTAAGACAATATAGGAATAATGAAA i mm10.chr1 C 0 I 9 s canFam3.chr1 112340828 92 - 122678785 CTAACTGTTTATTCACACGTGAGACGATG--------------------------AGGTAAATAGAATGTATAAGATGGGGAAGA--GAGAAAAA-TTAAGACAATGTGGGAAGGGTAGAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012148742v1 1291424 426 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=1652365.000000 s hg38.chr18_GL383571v1_alt 168441 167 + 198278 -----GTTGTAT-TTT------GGGGG-GCAAGTTGATTAAATGGCAGTTAGCAGAGGAGTTTGT--------------TGCCCAGA----AGT----GAGAGTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGGCCACTAACCCGCCATCAGC--------ACCTGTATCTTACTCAGATCTAGCCAGTATCATAT s panTro5.chr18 65078347 171 + 78221452 -----GTTGTAT-TTT------TGGGG-GCAAGTTGATTAAATGGCAGTTAGCAGAGGAGTTTGT--------------TGCCCAGAAAACAGT----GAGAGTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGGCCACTAACCCACCATCAGC--------ACCTGTATCTTACTCAGATCTAGCCAGTATCATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197347 171 + 77229886 -----GTTGTAT-TTT------TGGGG-GCAAGTTGATTAAATGGCAGTTAGCAGAAGAGTTTGT--------------TGCCCAGAAAACAGT----GAGAGTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGGCCACTAACCCGCCATCAGC--------ACCTGTATCTTACTCAGATCTAGCCAGTATCATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5416858 171 + 17472758 -----GTTGTAT-TTT------TGGGG-GCAAGTTGATTAAATGGCAGTTAGCAGAGGAGTTTGT--------------TGCCCAGAAAACAGT----GAGAGTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGGCCACTAACCCGCCATCAGC--------ACCTGTATCTTACTCAGATCTAGCCAGTATCATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457390 171 - 152096393 -----GTTGTAT-TTT------TTGGG-GCAAGTTGATTAAATGACAGTTAGCAGAGAAGTTTGT--------------TGCCCAGAAAACAGT----GAGAGTTTAGCTGTAGAGCAG--AAGTGATAGGTTC-CTC-TGTAGAGTGT-TGGCCGCTAACCCGCCATCAGC--------ACCTGTATCTTACTCAGATCTAGCCAGTATCATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407042 171 + 70235451 -----GTTGCAT-TTT------TGGGG-GCTAGTTGATTAAATGGCAGTTAGCAGAGGAGATTAT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGGCAGGTTC-CTC-TGTAGAGTGT-TGACCACTAACCCTCCATCAGC--------ACCCGTATCTTACTCAGATCTAGCCAGTATCATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098353 171 - 75711847 -----GTTGCAT-TTT------TGGGG-GCTAGTTGATTAAATGGCAGTTAGCAGAGGAGATTAT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGGCAGGTTC-CTC-TGTAGAGTGT-TGACCACTAACCCTCCATCAGC--------ACCCGTATCTTACTCAGATCTAGCCAGTATCATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657629 171 - 18804593 -----GTTGCAT-TTT------TGGGG-GCTAGTTGATTAAATGGCAGTTAGCAGAGGAGATTAT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGGCAGGTTC-CTC-TGTAGAGTGT-TGACCACTAACCCTCCATCAGC--------ACCCGTATCTTACTCAGATCTAGCCAGTATCATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269507 171 + 18905526 -----GTTGCAT-TTT------TAGGG-GCTAGTTGATTAAATGGCAGTTAGCAGAGGAGATTAT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGACCACTAACCCTCCATCAGC--------ACCCGTATCTTACTCAGATCTAGCCGGTATCATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098073 171 - 72318688 -----GTTGCGT-TTT------GGGGG-GCAAGTTGATTAAATGGCAGTTAGCAAAGGAGATTGT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGGCCACTAACCCTCCATCAGC--------ACGGGTATCTCACTCAGATCTAGCCAGTATCGTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 434850 171 - 1517660 -----GTTGCAT-TTT------TAGGG-GCTAGTTGATTAAATGGCAGTTAGCAGAGGAGATTAT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGTAGAGTGT-TGACCACTAACCCTCCATCAGC--------ACCCGTATCTTACTCAGATCTAGCCAGTATCATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3530927 169 + 6513552 -----GTTGCAT-TTT------GGGGA-GCAAATTGCTTAAATGGCAGTTAGAAGAGGAGATTGT--------------TGCCCAGAAAACAGT----GAGACTTTAGCTGTAGAGCAG--AAGTGACAGGTTC-CTC-TGT--AGTGT-TGGCCAGTAACCCTCCATCAGC--------ACCGGTATCTTACTCAGATCTAGCCAGTATCATAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301828 167 + 117903854 -----CTTGCAT-TTT------TAGGGGGCAAATTTATTAAATGGCAGTTAACAGAGGAGTTCAT--------------TGACCAGAAAAC--------AGAGTTCAGCGGTAGAGCAG--AAATGACAGGCTC-CTC-TGTAGAGTTT-TGGCCACTAACCCTCCATCAGC--------TCCTGCATCTTACTCAGATCCAGCCAGTATCGTA- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488341 167 - 31320352 -----CTTGCAT-TTT------TGGGGGACAAATTGATTAAATGGCAGTTAACAGAGGAGTTCAT--------------TGTCCAGAAAAT--------AGAGTTTAGTGGTAGAGCAG--AAATGACAGGTTC-CTC-TGTAGAGTTT-TGGCCACTAACCCTCCATCAGC--------ACCTGCATCTTACTCAGATCCAGCGAGTACCATA- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684157 167 + 2203405 -----CTTGCAT-TTT------TGGGGGGCAAATTGACTAAATGGCAGTTAACAGAGGAGTTCAT--------------TGCCCAGAAAAC--------AGAGTTTAGTGGTAGAGCAG--AAATGACAGGTTC-CTC-TGTAGAGTTT-TGGCCACTATCCCTCCATCAGC--------ACCTGCATCTTACTCAGATCCAGCCAGTACCGTA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636685 173 - 14941987 -----CTTGCAT-TTTGGGAGGTGGGGTGCAAATTGATTAAATGGCAGTTAACAGAGGAGTTCAT--------------TGCCCAGAAAAC--------AGAGTTTAGTGGTAGAGCAG--AAATGACAGGTTC-CTC-TGTAGAGTTT-TGGCCACTAACCCTCCATCAGC--------ACCTGCATCTTACTCAGATCCAGCCAGTACCGTA- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11262523 178 - 20685099 -----ATTGCAC-TTT--CATTTGGGG-GCAAATTGATCACCTGACAGTTAACAGAGCAGGCTGT--------------TGCTCCCTGAACAGA----GCGAGTTTAGCAG-GGAGCAC--ATGCTGCAGGCTCTCTT-TGTACA------AGCCAGTAACTCTCCATCAGCCAGGATGGGCCTCCACCTCAGAGAGATCCATTCCACACTATGT i otoGar3.GL873546 I 5 C 0 s mm10.chr1 111870656 156 + 195471971 -----CATATAT-TCT---------GG-TAAAATTGATTAACTGGCAATTAGCAGAGAAGTCTAT--------------TCCC---AAAACTTT----TAGATACTAGATAGGGAGCAA--GTCTGATAGGCTT-TCA-TG----GTATACAAGCAGAATCTTCATATCAAC--------ACCTACATCTC---CTGAGCTATCTCTCACAG--- i mm10.chr1 I 9 I 4 s canFam3.chr1 112340920 193 - 122678785 CTTGTTTTGTATGTTT------TGGGG-GCAAACTGATGAAATGCAAGGTAGCAGAGAAGTTTGTCCTGGATCTGTGAGTGGCCAACTTGCAATTCTCTACAGATTCCTGAGAAAACAGTTTAGTGGTGAGCTG-TTCTTGTATAATAT-TAGCCAGTAACCTTCCCTC-TT--------AGCTGTCACCTGGTCAGATCCAGCTGCCATT---- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e proCoq1.NW_012148742v1 1291424 426 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=5235471.000000 s hg38.chr18_GL383571v1_alt 168608 447 + 198278 TTCCTCAGTAGGCTTCCTTGCTGGAAAGCCACTAAA-----AGTTTCctttttcca----tccatgtgaggcagggagact---tctccctctgctcctgagcatttact-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcaccttctccttcatggtgatacaac---tcaacatggctatccttcagcacaagtttatatcactttgactccaccatcgggcagaaatcaattgtcttttttgaacctcaaatc-caaattctcg-gaaaag-----atgatttcctagcagagtc-agcgtttcatcatgactccagcagcaatggaaagcagttcagggtcatatagttcaaatactgc---tacaggggctgacattcgtgggtt-cgagatatcaatcatcttaggaagagagagctggcttataccttaaaagtatctattataAAATGACACAAACCAGAGAGCCATGC s panTro5.chr18 65078518 447 + 78221452 TTCCTCAGTAGGCTTCCTTGCTGGAAAGCCACTAAA-----AGTTTCctttttcca----tccatgtgaggcagggagact---tctccctctgctcctgagcatttact-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcaccttctccttcatggtgatacaac---tcaacatggctatccttcagcacaagtttatatcgctttgactctaccatcgggcagaaatcaattgtcctttttgaacctcaaatc-caaattctcg-gaaaag-----atgatttcctagcagagtc-agagtttcatcatgactccagcagcaatggaaagcagttcagggtcatatagttcaaatattgc---tacaggggctgacattcgtgggtt-tgggatatcaatcatctcaggaagagagagctggcttataccttaaaagTATCTGTTATAAAATGACACAAACCAGAGAGCCATGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197518 447 + 77229886 TTCCTCAGTAGGCTTCCTTGCTGGAAAGCCACTAAA-----AGTTTCctttttcca----tccatgtgaggcagggagact---tctccctctgctcctgagcatttact-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcaccttctccttcatggtgatacaac---tcaacatggctatccttcagcacaagtttatatcgctttgactctaccatcgggcagaaatcaattgtcctttttgaacctcaaatc-caaattctcg-gaaaag-----atgatttcctagcagagtc-agagtttcatcatgactccagcagcaatggaaatcagttcagggtcatatagttcaaatattgc---tacaggggctgacattcgtgggtg-taggatatcaatcatctcaggaagagagagctggcttataccttaaaagtatctattataAAATGACACAAACCAGAGAGCCATGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417029 447 + 17472758 TTCCTCAGTAGGCTTCCTTGCTGGAAAGCCGCTAAA-----AGTTTCctttttcca----tccatgtgaggcagggagact---tctccctctgctcctgagcatttact-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgctccttcatggtgatacaac---tcaacatggctatccttcagcacaagtttatatcgctttgactctaccatcgggcagaaatcaattgtcctttttgaacctcaaatc-caaattctcg-gaaaag-----atgatttcctagcagagtc-agagtttcatcatgactccagcagcaatggaaagcagtttagggtcatatagttcaaatattgc---tacaggggctgacattcgtgggtt-cgggatatcaatcatcttaggaagagagagctggcttataccttaaaagtatctattataGAATGACACAAACCAGAGAGCCATGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139457561 447 - 152096393 TTCCTCAGTAGGCTTCCTTGCTGGGAAGCCACTAAA-----AGATTCCCCTTTCCA----TCCAtctgaggcagggagact---tctccctctgctcctgagcatttact-------------------------------------------------------------------------------------------------------------------ctctt---c-tctttttctgagaatcaatttcacctgctccttcatggtgatacaac---tcaacatggctatccttcagcacaggtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-catattctca-gaaaag-----atgatttcctagcagagtc-agagtttcatcatgactccagcagcaatggaaagcagttcagggtcatatagttcaaatattgc---tacaggggctgacattcgtgggtt-cgggatatcaatcatcttaggaagagagagctggcttataccttaaaagtatctattataAAATGACACAAACCAGAGAGCCATGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407213 443 + 70235451 TTCCTGAGTAGGCTTCCTTTCTGGAAATCCACTAAA-----AGATTCCTCTTTCCATCCATCCATCCGAGGCAGGGAGACT---tctccgtctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaataaatttcacctgctccttcctggtgata--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-gaaaag-----atgttttcatagcagagtcgagagtttcatcgtgactccagcagcaatggaaagcagttcagggtcgtacagttcaaatattgc---tacacgggctgacattcgtggggt-cgggatatcaatcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCGTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098524 443 - 75711847 TTCCTGAGTAGGCTTCCTTTCTGGAAATCCACTAAA-----AGATTCCTCTTTCCATCCATCCATCCGAGGCAGGGAGACT---tctccgtctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgctccttcctggtgata--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-gaaaag-----atgttttcatagcagagtcgagagtttcatcgtgactccagcagcaatggaaagcagttcagggtcgtacagttcaaatattgc---tacacgggctgacattcgtggggt-cgggatatcaatcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCGTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13657800 443 - 18804593 TTCCTGAGTAGGCTTCCTTTCTGGAAAGCCACTAAA-----AGATTCCTCTTTCCATCCATCCATCCGAGGCAGGGAGACT---tctccgtctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgctccttcctggtgata--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-gaaaag-----atgttttcatagcagagtcgagagtttcatcgtgactccagcagcaatggaaagcagttcagggtcgtacagttcaaatattgc---tacacgggctgacattcgtggggt-cgggatatcaatcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCGTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13269678 443 + 18905526 TTCCTGAGTAGGCTTCCTTTCTGGAAAGCCACTAAA-----AGATTCCTCTTTCCATCCATCCATCCGAGGCAGGGAGACT---tctccgtctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgctccttcctggtgata--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-gaaaag-----gtgttttcatagcagagtcgagagtttcatcgtgactccagcagcaatggaaagcagttcagggtcgtacagttcaaatattgc---tacaggggctgacattcgtggggt-cgggatatcaatcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCGTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098244 443 - 72318688 TTCCTGAGTAGGCTTCCTTTCTGGAAAGCCACTAAA-----AGATTCCTCTTTCTATCCCTCCATCCAAGGCAGGAAGATT---tctctgtctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgttccttcctggtagta--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-ggaaag-----atgtcttcatagcagagtcaagagtttcatcatgactccagcagcaacggaaagcagttcagggtcatacagttcaaatattgc---tacaggggctgacattcgtgggtt-cgggatatcaatcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCGTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435021 443 - 1517660 TTCCTGAGTAGGCTTCCTTTCTGGAAAGCCACTAAA-----AGATTCCTCTTTCCATCCATCCATCCGAGGCAGGGAGACT---tctccgtctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgctccttcctggtgata--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-gaaaag-----gtgttttcatagcagagtcgagagtttcatcgtgactccagcagcaatggaaagcagttcagggtcgtacagttcaaatattgc---tacaggggctgacattcgtggggt-cgggatatcaatcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCGTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531096 443 + 6513552 TTCCTGAGTAGGCTTCCTTTCTGGAAAGCCACTAAA-----AGATTCCTCTTTCCATCCATCCATCCGAGGCAGGGAGACT---TCTCCATctgctcctgagcatttgct-------------------------------------------------------------------------------------------------------------------tcctt---c-tctttttctgagaatcaatttcacctgctccttcctggtgcta--------caacatggctatccttcagcacaagtttatatcgctttgactctaccatcaggcagaaattaattgtcctttttgaacctcaaatc-caaattctca-gaaaag-----gtgtttttatagcagagtcaagagtttcatcatgactccagcagcaatggaaagcagttcagggtcatacagttcaaatattgc---tacaggggctgacattcgtgggtt-cggggtatcagtcatcttagggagagagagctggCTTATACCTTA----TATCTGTTATAAAATGACACAAACCAGAGAGCCATGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105301995 429 + 117903854 TTCCAAATAGG-CTT-CTTGCTGGAAAGCCACTAAA-----GGATTTTTCTCTCCA----TCTGTCT------------CT---TCTTTCTCTGCTCCTAAGCATTTACT-------------------------------------------------------------------------------------------------------------------TGCTT---C-TCTTTTTCTGAGGATCAATTTCACCTGCTCCTTCATGGTGATACAAC---TCAATATGGCCATCCTTCAGCACAAGTTCATATCGCCTTGACTCCACCATCAGGCAGGTGTCGATTGTCCTTTTTGAACCTCAAATT-CAAATTCTCA-GAAAAG-----ATGGTTTCATACCAAAGTC-ACAGTTTCATCATGACTCCAGCAGCAATGGAAAGCAATTCAGGGTC--ATAGTTCAAATATTGC---TACAGGGGCTGACATTCGTGGGTT-CAGGGTATCAGTCATCTTAGGAAGAGAGAGCTAGCTTCTATCTTAAAAGTATCTATTATAAAATGACAT--ACCAGAGAGTCATGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488508 431 - 31320352 TTCCTGAGTAG-CTT-CTTGCTGGAAAGCCACTGAA-----GGATTCCtctctcca----tctgtct------------ct---tctttctctgctcctaagcatttact-------------------------------------------------------------------------------------------------------------------tgctt---c-tctttttctgaggatcagtttcacctgctccttcatggtgatacaac---tcaacatggctatccttcagcacaagtttatatcgccttgactttaccatcaggcagatatttattgtcctttttgaacctcaaatt-caaattctca-gaaaag-----aTGGTTTCATACCAGAGTC-AGAGTTTCATCATGACTTCAACAGCAATGGAAAGCAATTCAGGGTCATATAGTTCAAATATTGT---TATAGGGGCTGACATTCGTGGGTT-CAGGGTATCAGTCATCTTAGGAAGAGAGAGCTAGTTTATACCTTAAAAGTATCTATTATAAAATGACAT--ACCAGAGACTCATGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684324 432 + 2203405 TTCCTCAGTAGTCTT-CTTGCTGGAAAGCCACTAAA-----GGATTCCTCTCTCCA----TCTGTCT------------CT---TCTTTCTCTGTTCCTAAGCATTTACT-------------------------------------------------------------------------------------------------------------------TGCTT---C-TCTTTTTCTGAGGATCAATTTCACCTGCTCCTTCGTGGTGATACAAC---TCAACATGGCTATCCTTCAGCACAAGTTTATATTGCCTTGACTCTACCATCAGGCAGATATTGATTGTCCTTTTTGAACCTCAAATT-CAAATTCTCA-GAAAAG-----ATGGTTTCATATCAGAGTC-AGAGTTTCATCATGACTCCAGCAGCAATGGAAAGCAATTCAGGGTCATATAGTTCAAATATTGC---TGCAGGGGCTGACATTCGTAGGTT-CAGGCTATCAGTCATCTTAGAAAGAGAGAGCTAGCTTATACCTCAAAAGTATTTATTATAAAATGACGT--ACCAGAGAGTCATGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3636858 430 - 14941987 TTCCTCAGTAGGCTT-CTTGCTGGAAAGCCACTAAA-----GGATTCCtctctcca----tctgtct------------ct---tctttctctgctcctaagcatttacc-------------------------------------------------------------------------------------------------------------------tgctt---c-tctttttctgaggatcaatttcacctgctccttcatggtgatacaac---tcaacatggctatccttcagcacaagtttatatctccttgactctaccatcaggcagatattgattatcctttttgaacctcaaatc-caaattctca-gaaaag-----atggtttcatatcagagtc-agagtttcatcatgcctccagcagcaatggaaagcaattcagggtcatatagttcaaatattgc---tacaggggctgacattcgtgggtt-cagggtatcagtcatcttaggaagagagagctagattacaccttaaaagTA--TATTATAAAATGACAT--ACCAGAGAGTCATGC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1291850 454 - 1406956 TTCTTCAGTAGACTTTCTTGCTGGAAAGCCATTAAAAAGTAAGGTTCctttctcca----ttcatccaaggccaggagact---tctccttttgcttccaagcctttgct----------------------------------------------------------------------------------------------------------------tccttctt---c-tctttttctaaagatcagctttacctgctccttcacggagctacaac---tcaacatggctcttcttcagcacaagtttatattgccttgattctgccatcaggcaaaaataaattgtccttggtgaagtccaaatc-caaattctca-aaagag-----atgattgcacagcagggtc-agggttccatcatgacacagacagtgatggaaagctgttcagggttacatagttcgaacattac---tataagggctgatacttgtgggtt-tggg-TTTCGGTTATCTTAGGAGAACACAGATGGCTCATATCTTAAAAGTATGTATTATAAAATGACACACACCAGAGGGCCATGC i proCoq1.NW_012148742v1 I 426 I 13 s otoGar3.GL873546 11262701 539 - 20685099 TCCTT--------TTTCCTCTAGAAAAGCCACTCTGAGGTCAGGTTCCTTTCCCCA----TCCAGCCAAGGTGGAGAGGCT---TCTCCCTTTGCTTAGGAGCAtttttttttttttttttttttttttttttgcagtttttggctggggccaagtttgaacccaccacctccagtatatgggcctggcatcccactcctttgagtcacaggtgccgcccAATCCTTTTT---C-TTTTTCTCT-AAGATCAACTTTACCTGCTCCTTCTTGTAGATACAAC---TCAATATGGGTTTCCCTCAGTGCAAGTTTGCATTGGCTTGATTCTGACATCAGGCAAAAATACATTTTCCTTTGGGAAGTCCAACTCTCAAATTTTCA-GAAAAG-----ATGAAGGCCCAGCAGGGTT-AGGG-------------------GTGAAGGAAAGTACTTTAGGATGACATCGTCTGACTATCAC---TACAGGAGCTGATAGTTGCCAGTT-TGTG-TATTGGATATCTTAGGAGAACAGAGATGACTTATACtttaaaattatatattataaaatGGTACTTACCATAGGACTGTGC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111870816 422 + 195471971 TTCTACA--AGGCTTATATTGTAGGAAACT-----------ATATTCATTTGTCCA---ACCCAACC-------AGAGATTAAACATCATTTTGCTTAAAAACCTTTGTT-------------------------------------------------------------------------------------------------------------------CTTTTTAGC-TCATTTTCTAAAGACTGGTTTT-----CTATTCCATAGTAAGTCACCGTTTTATTATGACTGTCATTCAACATGAGATTATATTAACTTGATTCTGCAATCAAGGAGAAATAAATTATAGTTTTAGAACACCATATC-TAAGTACTTACAAAAAG-----GTGGTTGCTTTTCAGTGTC-TGGATTCCATTATGGCTCAAACAGCAATAGAAAGTAATTCAGTATCATACAAT-CAACCTTCACATTTACAGAA---GACATGCATGGGTTGTAGAATATCAATTATCTTAGG-AGAAAAATATAGCATGTACCTTTAAACTATTTATTA-AAAACAATACAAA-------------- i mm10.chr1 I 4 C 0 s canFam3.chr1 112341113 455 - 122678785 CCCCACAGTAGACATCCTCACTGGAAAGCCACTATGAAGTCAGGTTCCTCTCTCCA----CACAtccaaggccaggagact---tctctttctgcttttgagcctttgct-------------------------------------------------------------------------------------------------------------------tcatc---cttcaattttggaggatcagctttaccagatctgtcatggggataggac---ttaatatggctatccctcagcacaagcttatattgcctcgattctaccatcagacaggaataaattatcctttttgaactcccaat--caaagtctca-ggaaagaaaaaatgattgcacagcatggtc-agagttacatcatgactcacacagtgatggaaagaagttcagggttaagtagtccaaacattgc---tacaggggccgacatttgtgggtt-tggggtatcaatcatcatcagagaacagagcaggctcatatctaaaaagtatctactGTAAAATGACAT--ATCAGAGGGTCATGC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=184634.000000 s hg38.chr18_GL383571v1_alt 169055 20 + 198278 A-CCCCCAGGGAAGCACATAA- s panTro5.chr18 65078965 20 + 78221452 A-CCCCCAGGGAAGCACATAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197965 20 + 77229886 A-CCCCCAGGGAAGCACATAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417476 21 + 17472758 ACCCCCCAGGGAAGCACATAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458008 20 - 152096393 A-CCCCCAGGGAAGCACATAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407656 20 + 70235451 A-CCCCCGGGGAAGCATATAA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098967 20 - 75711847 A-CCCCCGGGGAAGCATATAA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658243 20 - 18804593 A-CCCCCGGGGAAGCATATAA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270121 20 + 18905526 A-CCCCCGGGGAAGCATATAA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098687 20 - 72318688 A-CCCCCAGGGAAGCATATAA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435464 20 - 1517660 A-CCCCCAGGGAAGCATATAA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531539 20 + 6513552 A-CTGCCAGGGAAGCATATAA- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302424 20 + 117903854 T-CCCCCAGAGATGCACATAA- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488939 20 - 31320352 A-CCCCCAGAGATGCACATAA- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684756 20 + 2203405 A-CCCCCAGAGACACACATAA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637288 20 - 14941987 A-CCCCCAGAGACGCACATAA- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11263240 20 - 20685099 -TTCCTCTGAAAGGCACATAG- i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111871238 10 + 195471971 -----------GTGCACATAA- i mm10.chr1 C 0 I 1 s canFam3.chr1 112341568 21 - 122678785 -TTCCCCTGAGAGGCATAGAGA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e proCoq1.NW_012148742v1 1292304 13 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=201179.000000 s hg38.chr18_GL383571v1_alt 169075 14 + 198278 AAGCAGTGTATTTG s panTro5.chr18 65078985 14 + 78221452 AAGCAGTGTATTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197985 14 + 77229886 AAGCAGTGTATTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417497 14 + 17472758 AAGCAGTGTATTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458028 14 - 152096393 AAGCAGTGTATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407676 14 + 70235451 AAGCAGTGTATTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63098987 14 - 75711847 AAGCAGTGTATTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658263 14 - 18804593 AAGCAGTGTATTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270141 14 + 18905526 AAGCAGTGTATTCG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098707 14 - 72318688 AAGCAGTGTATTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435484 14 - 1517660 AAGCAGTGTTTTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531559 14 + 6513552 AAGCAGTGTATTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302444 14 + 117903854 AAGCAGTGTATTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488959 14 - 31320352 AAGCTGTGTATTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684776 14 + 2203405 AAGCAGCATATTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637308 14 - 14941987 AAGCAGTGTATTtg i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1292317 14 - 1406956 AAGCAGTGGATCTG i proCoq1.NW_012148742v1 I 13 C 0 s otoGar3.GL873546 11263261 14 - 20685099 AAACAGTGTATCTG i otoGar3.GL873546 I 1 I 287 s mm10.chr1 111871249 14 + 195471971 AAGAAAAGGACTTG i mm10.chr1 I 1 C 0 s canFam3.chr1 112341589 14 - 122678785 AAGCAGTGGATTTG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=429659.000000 s hg38.chr18_GL383571v1_alt 169089 33 + 198278 GTGGTGAGTAGTTGAGGTGTGGGAGGTTGAGGT s panTro5.chr18 65078999 33 + 78221452 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64197999 33 + 77229886 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417511 33 + 17472758 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458042 33 - 152096393 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407690 33 + 70235451 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099001 33 - 75711847 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658277 33 - 18804593 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270155 33 + 18905526 GTGGTGAGTAGTTGAGGTCTTGGAGGTTGAGGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098721 33 - 72318688 GTGGTGAGTAGTTGAGGTGTTGGAGATTGAGGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435498 33 - 1517660 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531573 33 + 6513552 GTGGTGAGTAGTTGAGGTGTTGGAGGTTGAGGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302458 33 + 117903854 GTGGTGAGTAGTTGAGGTGGTGGAAGGTGACGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19488973 33 - 31320352 GTGGTGAGTAGTTGACGTTCTGGAAGTTGAGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684790 33 + 2203405 ATTGTGAGTAGTTGAGGTGGTGGAAGTTGAGGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637322 33 - 14941987 gtggtgagtagttgaggtggtggaagttgaggt i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1292331 33 - 1406956 GTGTTGGGTAGTTGAGGTGGTGGAGGTTGAGGT i proCoq1.NW_012148742v1 C 0 I 56 s otoGar3.GL873546 11263562 22 - 20685099 GTGGTGAGTAGTTGAGGTG-----------GGT i otoGar3.GL873546 I 287 C 0 s mm10.chr1 111871263 28 + 195471971 --AATCTGCATACGATGTA---GAAGTTGCAGT i mm10.chr1 C 0 C 0 s canFam3.chr1 112341603 33 - 122678785 AAGGTGGGTAGTAGAGGCGATAGAGGTTGAGGT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=173963.000000 s hg38.chr18_GL383571v1_alt 169122 14 + 198278 ATGGTGGGATAGTG s panTro5.chr18 65079032 14 + 78221452 ATGGTGGGATAGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198032 14 + 77229886 ATGGTGGGATAGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417544 14 + 17472758 ATGGTGGGATAGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458075 14 - 152096393 ATGGTGGGATAGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407723 14 + 70235451 ATGGTGGGATAGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099034 14 - 75711847 ATGGTGGGATAGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658310 14 - 18804593 ATGGTGGGATAGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270188 14 + 18905526 ATGGTGGGATAGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098754 14 - 72318688 ATGGTGGGATAGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435531 14 - 1517660 ATGGTGGGATAGTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531606 14 + 6513552 ATGGTGGGATAGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302491 14 + 117903854 GTGGTGGGATAGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489006 14 - 31320352 GTGGTGGGATAGTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684823 14 + 2203405 GTGGTGGGATAGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637355 14 - 14941987 gtggtgggatagtg i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11263584 10 - 20685099 ----TAGGGTAGTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112341636 13 - 122678785 -GGGTGGGATGGCA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e mm10.chr1 111871291 0 + 195471971 C e proCoq1.NW_012148742v1 1292364 56 - 1406956 I e dasNov3.JH575754 515218 5969 - 2150887 I a score=333502.000000 s hg38.chr18_GL383571v1_alt 169136 34 + 198278 AAAGGTTGGGGGGGAGGAAAG--------GTTCAAAAATGCC s panTro5.chr18 65079046 34 + 78221452 AAAGATTGGGGGGGAGGAAAG--------GTTCAAAAATGCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198046 34 + 77229886 AAAGATTGAGGGGGAGGAAAG--------GTTCAAAAATGCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417558 34 + 17472758 AAAGGTTGGGGGGTAGGAAAG--------GTTCAAAAATGCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458089 34 - 152096393 AAAGGTTGGGTGGGAGGAAAG--------GTTCAAAAATGCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407737 34 + 70235451 AAAGGTTTGGTGGAAGGAAAG--------GTTCAAAAATGCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099048 34 - 75711847 AAAGGTTTGGTGGAAGGAAAG--------GTTCAAAAATGCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658324 34 - 18804593 AAAGGTTTGGTGGAAGGAAAG--------GTTCAAAAATGCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270202 34 + 18905526 AAAGGCTGGGTGGAAGGAAAG--------GTTCAAAAATGCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098768 34 - 72318688 AAAGGTTGGGTGGAAGGAAAG--------GTTCGAAAATGCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435545 34 - 1517660 AAAGGCTGGGTGGAAGGAAAG--------GTTCAAAAATGCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531620 34 + 6513552 AAAGGTTGGGTGGAAGGAAAG--------GTTCAAAAATGCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302505 34 + 117903854 GAAGACTGGATTAGAGGAAAG--------TTTACAAAAGGCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489020 34 - 31320352 GAAGACTGAGTTAGAGGAAAG--------TTTAAAAAATACC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684837 34 + 2203405 GAAGACTGGGTTAGAGGAAAG--------TTTAAAAAATGGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637369 34 - 14941987 gAAGACTGGGTTAGAGGAAAG--------TTTAAAAAATGCC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11263594 34 - 20685099 GAAGGTAGGGTGGAAGGGTAG--------GTTTGAAAATGCC i otoGar3.GL873546 C 0 I 28 s mm10.chr1 111871291 25 + 195471971 -AGAATAGGGTGAGAG----------------TTAAAGTGCT i mm10.chr1 C 0 C 0 s canFam3.chr1 112341649 42 - 122678785 GGAGGTAGGGTGGGAGGTCGGCATATGTTGTTCAAAAATGTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 521187 38 - 2150887 AAAGGTGGTGGTGGTGGCATA----TGTTGTTCCAAAATGTC i dasNov3.JH575754 I 5969 C 0 e micMur3.chr19 41551326 764 + 83067054 I e proCoq1.NW_012148742v1 1292364 56 - 1406956 I a score=46581.000000 s hg38.chr18_GL383571v1_alt 169170 8 + 198278 CACGCTTT s panTro5.chr18 65079080 8 + 78221452 CACGCTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198080 8 + 77229886 CACGCTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417592 8 + 17472758 CATGCTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458123 8 - 152096393 CACAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407771 8 + 70235451 CGTACTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099082 8 - 75711847 CGCACTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658358 8 - 18804593 CGCACTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270236 8 + 18905526 CACACTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098802 8 - 72318688 CACACTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435579 8 - 1517660 CACACTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531654 8 + 6513552 CACACTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302539 8 + 117903854 CACACATC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489054 8 - 31320352 CACACATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684871 8 + 2203405 CACACATC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637403 8 - 14941987 CATACATC i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111871316 8 + 195471971 CACAAGCC i mm10.chr1 C 0 I 2 s canFam3.chr1 112341691 8 - 122678785 CACAGCTT i canFam3.chr1 C 0 I 5 s dasNov3.JH575754 521225 8 - 2150887 GACTAGTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e proCoq1.NW_012148742v1 1292364 56 - 1406956 I e otoGar3.GL873546 11263628 28 - 20685099 I a score=75450.000000 s hg38.chr18_GL383571v1_alt 169178 11 + 198278 ATGTGAACAGG s panTro5.chr18 65079088 11 + 78221452 ATGTGAACAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198088 11 + 77229886 ATGTGAACAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417600 11 + 17472758 ATGTGAACAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458131 11 - 152096393 ATGTAAACAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407779 11 + 70235451 ATGTAAACAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099090 11 - 75711847 ATGTAAACAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658366 11 - 18804593 ATGTAAACAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270244 11 + 18905526 ATGTAAACAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098810 11 - 72318688 ATGTAAACAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435587 11 - 1517660 ATGTAAACAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531662 11 + 6513552 ATATAAACAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302547 9 + 117903854 ACG--GACAGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489062 9 - 31320352 ACA--AACAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684879 9 + 2203405 ATG--AACAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637411 9 - 14941987 ACG--AACAGG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1292420 11 - 1406956 ATGTAAACAAG i proCoq1.NW_012148742v1 I 56 C 0 s mm10.chr1 111871326 5 + 195471971 ------ATAAG i mm10.chr1 I 2 I 6 s canFam3.chr1 112341704 7 - 122678785 ATGCAAG---- i canFam3.chr1 I 5 C 0 s dasNov3.JH575754 521233 8 - 2150887 CCATAAAC--- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41551326 764 + 83067054 I e otoGar3.GL873546 11263628 28 - 20685099 I a score=525302.000000 s hg38.chr18_GL383571v1_alt 169189 33 + 198278 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT s panTro5.chr18 65079099 33 + 78221452 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198099 33 + 77229886 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417611 33 + 17472758 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458142 33 - 152096393 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407790 33 + 70235451 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099101 33 - 75711847 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658377 33 - 18804593 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270255 33 + 18905526 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098821 33 - 72318688 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435598 33 - 1517660 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531673 33 + 6513552 CTGACTCCTCTTTCTTATCCC---CT---GAAAATTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302556 33 + 117903854 CTGACTCCTCTTTCCTACTCC---CT---GAAAATTATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489071 33 - 31320352 CTGACTCTTCTTTCTTACTTC---CT---GAAAATCATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684888 33 + 2203405 CTGACTCCTCTCTCTTACTCC---CT---GAAGATTATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637420 33 - 14941987 CTGACTCCTCTTTCTTACTCC---CT---GAAAATTATT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41552090 33 + 83067054 CTGACTCCTCTTTCTTACCCT---CT---GAAAATTATT i micMur3.chr19 I 764 I 1764 s proCoq1.NW_012148742v1 1292431 33 - 1406956 CGGACTCCTCTTTCTTACCTT---CT---GAAAATTATT i proCoq1.NW_012148742v1 C 0 C 0 s mm10.chr1 111871337 29 + 195471971 CTGACT----TGTCTGACTCC---TT---GAAAGGTATA i mm10.chr1 I 6 C 0 s canFam3.chr1 112341711 36 - 122678785 CTGACTCCTCTTCCTTATCCC---CCTTGGAAAATTATT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 521241 35 - 2150887 -TGATTCTTCCTTCTTACCCCACTTT---GAAAATCATT i dasNov3.JH575754 C 0 C 0 e otoGar3.GL873546 11263628 28 - 20685099 I a score=414949.000000 s hg38.chr18_GL383571v1_alt 169222 31 + 198278 CCTTTTGTAGAATGTATTAAATTTACCTAAT s panTro5.chr18 65079132 31 + 78221452 CCTTTTGTAGAATGTATTAAATTTACCTAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198132 31 + 77229886 CCTTTTGTAGAATGTATTAAATTTACCTAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417644 31 + 17472758 CCTTTTGTAGAATGTATTAAATTTACCTAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458175 31 - 152096393 CCTTTTGTAGGCTGTATTAAATTTACCTAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407823 31 + 70235451 CCTTTTGTAGAATGTATTAAATTTACCTAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099134 31 - 75711847 CCTTTTGTAGAATGTATTAAATTTACCTAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658410 31 - 18804593 CCTTTTGTAGAATGTATTAAATTTACCTAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270288 31 + 18905526 CCTTTTGTAGAATGTATTAAATTTACCTAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098854 31 - 72318688 CCTTTTGTAGAATGTATTAAATTTACCTAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435631 31 - 1517660 CCTTTTGTAGAATGTATTAAATTTACCTAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531706 31 + 6513552 CCTTTTGTAGAACGTATTAAATTTACCTAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302589 31 + 117903854 TCTATTGTCAAATGTATTAAATTTACCTAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489104 31 - 31320352 TCTTTTGGCAAAAGTATTAAATTTACCTAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684921 31 + 2203405 TCTTTTGTCAAATGTATTAAATTTACCTAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637453 31 - 14941987 TCTTTTGTCAAATGTATTAAATTTACCTAAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1292464 29 - 1406956 --TTTGATAGGATATCTTAAATTTACCTAAT i proCoq1.NW_012148742v1 C 0 C 0 s mm10.chr1 111871366 31 + 195471971 CATTTTATAAAGTTTAGTAAACATATGTAAT i mm10.chr1 C 0 I 21 s canFam3.chr1 112341747 31 - 122678785 TCTTTGGTAGGATTTATTAAATCTGCCTTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 521276 31 - 2150887 CCTTTAGTAGAATATATTAAATTTACCTGTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e otoGar3.GL873546 11263628 28 - 20685099 I a score=264056.000000 s hg38.chr18_GL383571v1_alt 169253 20 + 198278 TAGAAGAATCACCTAGAATT s panTro5.chr18 65079163 20 + 78221452 TAGAAGAATCACCTAGAATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198163 20 + 77229886 TAGAAGAATCACCTAGAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417675 20 + 17472758 TAGAAGAATCACCTAGAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458206 20 - 152096393 TAGAAGAATCACCTAGAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407854 20 + 70235451 TAGAAGAATCACCTAGAATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099165 20 - 75711847 TAGAAGAAGCACCTAGAATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658441 20 - 18804593 TAGAAGAATCACCTAGAATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270319 20 + 18905526 TAGAAGAATCACCTAGAATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098885 20 - 72318688 TAGAAGAATCACCTAGAATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435662 20 - 1517660 TAGAAGAATCACCTAGAATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531737 20 + 6513552 TAGAAGAATCACCTAGAATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302620 20 + 117903854 TAGAAGATTCACCTCAAATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489135 20 - 31320352 TAGAAGATTCACCTCAAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684952 20 + 2203405 TAGAAGATTCACCTCAAATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637484 20 - 14941987 TAGAAGATTCATTTCAAATT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1292493 20 - 1406956 TATAAAAATCAACCAGAATT i proCoq1.NW_012148742v1 C 0 I 1709 s otoGar3.GL873546 11263656 20 - 20685099 aaaaaaaaTTAAGCAGAATT i otoGar3.GL873546 I 28 I 1 s mm10.chr1 111871418 20 + 195471971 CAGGAAAATAATCATTAATT i mm10.chr1 I 21 I 48 s canFam3.chr1 112341778 20 - 122678785 TATAAAAATCACCTAGAAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 521307 20 - 2150887 CATGAAAATCACCTAGAATT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I a score=1181938.000000 s hg38.chr18_GL383571v1_alt 169273 109 + 198278 -ACTTG-TTAAAA-GTACGAGATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTT-AAATTCCA----------TTATGATCCTGCAAAATT s panTro5.chr18 65079183 109 + 78221452 -ACTTG-TTAAAA-GTACGAGATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTT-AAATTCCA----------TTATGATCCTGCAAAATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198183 109 + 77229886 -ACTTG-TTAAAA-GTACGAGATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTT-AAATTCCA----------TTATGATCCTGCAAAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417695 109 + 17472758 -ACTTG-TTAAAA-GTATGAGATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTT-AAATTCAA----------TTATGATGCTGCAAAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458226 109 - 152096393 -ACTTG-TTAAAA-GTACGAGATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTT-AAATTCCA----------TTATGATCCTGCAAAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407874 110 + 70235451 -ACTTG-TTAAAA-GTACGAAATATGAGATCCAA-AACCCTACTGGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTAAAAATTCCA----------TGATGGTCCTGCAAAATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099185 110 - 75711847 -ACTTG-TTAAAA-GTACGAAATATGAGATCCAA-AACCCTACTGGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTAAAAATTCCA----------TGAGGGTCCTGCAAAATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658461 110 - 18804593 -ACTTG-TTAAAA-GTACGAAATATGAGATCCAA-AACCCTACTGGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTAAAAATTCCA----------TGATGGTCCTGCAAAATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270339 110 + 18905526 -ACTTG-TTAAAA-GTACGAAATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAACCTGTATTTTAAAAATTCCA----------TTATGGTCCTGCAAAATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60098905 110 - 72318688 -ACTCG-TTAAAA-GTACGAAATGTGAGATCCAA-AACCCTACTAGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGCCTGTATTTTTAAAATTCAA----------TTATGGTCCTGCAAAATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435682 110 - 1517660 -ACTTG-TTAAAA-GTACGAAATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAACCTGTATATTAAAAATTCCA----------TTATGGTCCTGCAAAATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531757 110 + 6513552 -ACTTG-TTAAAA-GTACGAAATATGAGATCCAA-AACCCTACTTGAAGGTAGAGTGAGGAAGGAAATAT----AA---GAAGTCTGTATTTTTAAAATTCCA----------TTGTGGTCCTGCAAAATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302640 109 + 117903854 -GCTTG-TTAAAA-GCACAAAATATGAGATCCAA-GACCCTACTTGAAAATAGAATGAGGAAGGAAATGA----AA---GAAGCTCGAATTTTC-AAATTCTA----------TTATGATCCTGCAAAATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489155 109 - 31320352 -GCTTG-TTAAAA-GTACAAAATATGAGATCCAA-GACCCAACTTGAAAATAGAGTGAGGAAGGAAATGT----AA---GAAACTCGAATTTTC-AGATTCTA----------TTTTGATCCTACAAAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1684972 110 + 2203405 -GCTTG-TTAAAATAAAAAAAATATGAGATCCAA-GACCCTACTTGAAAATAGACTGAGGAAGGAAATGT----AA---GAAACTCGAATTTTC-AAATTCTA----------TTATGATTCTGCAAAATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637504 109 - 14941987 -GCTTG-TTAAAA-GCACAAAATATGAGATCCAAGGACCCTACTTGAAAATAGAGTGAGGAAGGAAATGT----AA---GAAACTCGAATTTTC-AAA-TCTA----------TTATGATCCTGCAAAATT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11263677 113 - 20685099 -GCCTA-TTAAAA-ATAAAAAATACGAGATCTAA-GGCCC-ACTTGAAGATAGGGTGCGGAGGGAAATACAAAAAA---AAAATCTGTATTTTT-AAATGCCAT---------TTATGATCCCGTGAAATT i otoGar3.GL873546 I 1 I 1351 s mm10.chr1 111871486 104 + 195471971 -GCATG-TTAAAA-ATAGAAAAATTGAAATCTTT-TATATAATTATGCGATAG-----GCAAGGAAATAA----AAGATGAAATCCATATTTTA-AAAT---A----------TTACAATTATGTGAAATT i mm10.chr1 I 48 C 0 s canFam3.chr1 112341798 105 - 122678785 -GCTTATTTAAAA-ATACACAGTATGAAATCC---TACCTCA---GAATGATGGGTGGGGAAGGGGATGC----AA---GGGATTCATATTTTT-AAATGCCA----------TTTTGATCATGCAAAACT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 521327 109 - 2150887 GTTTTT-ATAAAA-ATACACAAAAGGGGATTCAA-GACCCAACCCTAA-ATATATGGAGG--------------TA---GGAATCCATATTTGT-AAATGTCATAGGAGGTTCTTGTGATGAGTCAAATTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I a score=313013.000000 s hg38.chr18_GL383571v1_alt 169382 25 + 198278 AACAAATCACCATTAGA----TAACCTTT s panTro5.chr18 65079292 25 + 78221452 AACAAATCACCATTAGA----TAACCTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198292 25 + 77229886 AACAAATCACCATTAGA----TAACCTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417804 25 + 17472758 AACAAATCACCATTAGA----TAACCTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458335 25 - 152096393 AACAAATCACCATTAGA----TAACCTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57407984 25 + 70235451 AACAAATCACCATTAGA----TAACCTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099295 25 - 75711847 AACAAATCACCATTAGA----TAACCTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658571 25 - 18804593 AACAAATCACCATTAGA----TAACCTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270449 25 + 18905526 AACAAATCACCATTAGA----TAACCTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099015 25 - 72318688 AACAAATCACCATTAGA----TAACCTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435792 25 - 1517660 AACAAATCACCATTAGA----TAACCTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531867 25 + 6513552 AACAAAGCACCATTAGA----TAACCTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302749 25 + 117903854 AGCAAATTACCATTAGA----TAACCTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489264 25 - 31320352 AGCAAATTACCATTAGA----TAACCTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685082 25 + 2203405 AGCAAATTACCATTAGA----TAACTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637613 25 - 14941987 AGCAAATTACCATTAGA----TAACCTTT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111871590 22 + 195471971 ---AAATTACCCTGAAA----TGGCCTAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112341903 29 - 122678785 GGCAAATTACCCTTAGAGAGCTAACCTTT i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 521436 29 - 2150887 AGCAAATTACCCTTACAACCATAACCCTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e otoGar3.GL873546 11263790 1351 - 20685099 I a score=103339.000000 s hg38.chr18_GL383571v1_alt 169407 9 + 198278 TAAAATACT s panTro5.chr18 65079317 9 + 78221452 TAAAATATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198317 9 + 77229886 TAAAATATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417829 9 + 17472758 TAAAATATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458360 9 - 152096393 TAAAATATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408009 9 + 70235451 TAAAATATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099320 9 - 75711847 TAAAATATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658596 9 - 18804593 TAAAATATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270474 9 + 18905526 TAAAATATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099040 9 - 72318688 TAAAATATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435817 9 - 1517660 TAAAATATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531892 9 + 6513552 TAAAACATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302774 9 + 117903854 AAAAATATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489289 9 - 31320352 AAAAATACG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685107 9 + 2203405 AAAAATGCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637638 9 - 14941987 AAAAATATT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11265141 9 - 20685099 taaaataCC i otoGar3.GL873546 I 1351 C 0 s mm10.chr1 111871612 9 + 195471971 AAAAGAACT i mm10.chr1 C 0 I 237 s canFam3.chr1 112341933 9 - 122678785 AAAAATATT i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 521465 9 - 2150887 GTAAGTATT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I a score=160660.000000 s hg38.chr18_GL383571v1_alt 169416 13 + 198278 GCCAGCTaccaac s panTro5.chr18 65079326 13 + 78221452 GCCAGCTaccaac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198326 13 + 77229886 GCCAGCTaccaac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417838 13 + 17472758 GCCAACTaccaac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458369 13 - 152096393 GCCAGCTaccaac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408018 13 + 70235451 ACCAGCTaccaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099329 13 - 75711847 ACCAGCTaccaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658605 13 - 18804593 ACCAGCTaccaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270483 13 + 18905526 ACCAGCTaccaac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099049 13 - 72318688 GCCAGCTaccaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435826 13 - 1517660 ACCAGCTaccaac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531901 13 + 6513552 GTCAGCTaccaac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302783 13 + 117903854 GCTAGCTaccaac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489298 13 - 31320352 GCCAGCTaccaac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685116 13 + 2203405 GCCAGCTACCGAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637647 13 - 14941987 GCCAGCTaccaac i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11265150 13 - 20685099 GTGGGCGGAcaac i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112341942 13 - 122678785 GCCAGCCACTTAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 521474 13 - 2150887 GCTAGCTGCTTAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111871621 237 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I a score=10028.000000 s hg38.chr18_GL383571v1_alt 169429 1 + 198278 a s panTro5.chr18 65079339 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198339 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417851 1 + 17472758 a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458382 1 - 152096393 a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408031 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099342 1 - 75711847 g i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658618 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270496 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099062 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435839 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531914 1 + 6513552 g i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302796 1 + 117903854 a i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489311 1 - 31320352 a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685129 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637660 1 - 14941987 a i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11265163 1 - 20685099 a i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 521487 1 - 2150887 A i dasNov3.JH575754 C 0 I 510 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111871621 237 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e canFam3.chr1 112341955 0 - 122678785 C a score=1264753.000000 s hg38.chr18_GL383571v1_alt 169430 145 + 198278 tcgcc----ctaaacctgctgcccccaccaa-taact----gagcccctgataaccacc-----acagtctagttttatgagatc-aat---ttgtaaaaa--atccacatgtgagtgagttcatgcagtagttgtctttctgtgcctggcttatttcacttaac s panTro5.chr18 65079340 145 + 78221452 tcacc----ctaaacctgctgcccccaccaa-taact----gagcccctgataaccacc-----acactctagttttatgagatc-aat---ttgtaaaaa--atccacatgtgagtgagttcatgcagtagttgtctttctgtgcctggcttatttcacttaac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198340 145 + 77229886 tcgcc----ctaaacctgctgcccccaccaa-taact----gagcccctgataaccacc-----acactctagttttatgagatc-aat---ttgtaaaaa--atccacatgtgagtgagttcatgcagtagttgtctttctgtgcctggcttatttcacttaac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417852 145 + 17472758 tcgcc----ctaaacctgctgcccccaccaa-taact----gagcccctgataaccacc-----acactctagttttatgagatc-aat---ttgtaaaaa--atccacatgtgggtgagttcatgcagtagttgtctttctgtgcctggcttatttcacttaac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458383 140 - 152096393 tctcc----ctaaacctgctgcccccacc----aact----gagcccctgataaccacc-----acactctacttttatgagatc-aat---tttttaaaa--atccac--gtgagtgacttcatgcggtagttgtctttctgtgcctggcttatttcacttaac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408032 149 + 70235451 tctccctccctaaacctgctgcccccaccaa-caccc----gagcccctgatcaccacc-----acattctagttgtatgagatc-aat---ttttaaaat--atccacatgtgagtgagttcatgcagtatctgtctttctgtacctggcttatttcacttaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099343 149 - 75711847 tctccctccctaaacctgctgcccccaccaa-caccc----gagcccctgatcaccacc-----acattctagttgtatgagatc-aat---ttttaaaat--atccacatgtgagtgagttcatgcagtatctgtctttctgtacctggcttatttcacttaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658619 149 - 18804593 tctccctccctaaacctgctgcccccaccaa-caccc----gagcccctgatcaccacc-----acattctagttgtatgagacc-aat---ttttaaaat--atccacatgtgagtgagttcatgcagtatctgtctttctgtacctggcttatttcacttaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270497 149 + 18905526 tctccctccctaaacctgctgcccccaccaa-catcc----gagcccctgatcaccgcc-----acattctagttgtatgagatc-aat---ttttaaaac--atccacacgtgagtgagttcatgcagtagctgtctttctgtacctggcttatttcacttaac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099063 145 - 72318688 tctccctccctaaatctgctgcacccaacaa-caccc----gagcccctgatcactacc-----acattctagttgtatgagatc-aat---ttttaaaac--atccacacgtgagtgagttcatgcagtagt--tctttctgtacctgga--atttcacttaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435840 149 - 1517660 tctccctccctaaacctgctgcccccaccaa-catcc----gagccgctgatcaccgcc-----acattctagttgtatgagatc-agt---ttttaaaac--atccacacgtgagtgagttcatgcagtagctgtctttctgtacctggcttatttcacttaac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3531915 149 + 6513552 tctccctctctaaacctgctgcccccaccaa-caccc----gagcccctgatcaccacc-----acattctagttgtgtgagatc-aat---ttttaaaac--atccacacgtgagtgagttcatgcagtagttatctttctgtacctggcttatttcacttaac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302797 148 + 117903854 tctcc----ctaaacccactgctgtcaccaa-cacct----gagcccctgataaccacc-----acactctagttgtatgagatt-aattttttttaaaaa--atccacgtttgtgtgagtttatgcagtagttgtctttctgtacctggcttattttgcttagc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489312 154 - 31320352 tctcc----ctaaacccactgctgccaccaa-cacctgagcgagcccctgataaccatc-----acactctagttgtatgagatc-aatattttttaaaaattatccatatttgagtgagttcatgcagtagtagtctttctgtacctggcttatttcgcttagc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685130 120 + 2203405 TCTCC----CTAAACCCACTGCTGCCACCAA-CACCT----GAGCCCCCGATAACCACC-----ACA-------------------------TTTAAAAAAAAAtccatatttgagtgagttcat------gtagtctttctgtacctggcttacttcacttaac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637661 148 - 14941987 tgtcc----ctaaacccactgctgccaccaa-cacct----gagcccctgataatcacc-----acactctagttgtgtgagatt-aatt--ttttaaaaataagccacatttgagtgagttcattcagtagttgtctttctgtacccagcttatttcgcttagc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11265164 151 - 20685099 tctct----cc-aaccacctgccccatccaaccatcc----caatccttggtaaccatcatgctactctctagttctaggaaatcaaat---ttttaaaat--atatgtctgcacattaggtggtgctgtatttgtctttctgtgctcagcttatttcacccaga i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111871621 237 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112341955 0 - 122678785 C a score=2996699.000000 s hg38.chr18_GL383571v1_alt 169575 296 + 198278 ataatgtcctccaagttcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttctttatccactcatctattgatggacacttaggttgattccatagcttggctattatgaatagagctgtaattaacatagcagtgcag--agatatatatcagtgtctctttgacatactgatatcatcacaaaaa-taataactat---aagtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatgatattttacatg-----atac s panTro5.chr18 65079485 300 + 78221452 ataatgtcctccaagttcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccagtgtgtatatgtacc--acattttctttatccactcatctattgatggacacttaggttgattccatagcttggctattgtgaatagagctgtaattaacatagcagtgcag--agatatatatcagtgtctctttgacatactgatatcatcacaaaaa-taataactat---aagtgatgcataggttaatta----g----atttagtcaaaccgtaatctacatatacttcaaaacatgatattttacatg-ataaatac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198485 300 + 77229886 ataatgtcctccaagttcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccagtgtgtatatgtacc--gcattttctttatccactcatctattgatggacacttaggttgattccatagcttggctattgtgaatagagctgtaattaacatagcagcgcag--agatatatatcagtgtctctttgacatactgatatcatcacaaaaa-taataactat---aagcgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatgatattttacatg-ataaatac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5417997 300 + 17472758 ataatgtcctccaagttcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttctttatccactcatctattgatggacactcaggttgattccatagcttggctattgtgaatagagctgtaattaacacagcagtgcag--agatatatatcagtgtctctttgacatactgatatcaacacaaaaa-taataactat---aagtgatgcataggttaatta----g----atttagtcaaaccgtaatctacgtatacttcaaaacatgatattttacatg-ataaatac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458523 296 - 152096393 ataatgtcctccaagttcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttctttatccactcatctattgacggacacctaggttgattccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agatacatatcagtgtttctttgacatactgatatcatcacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatgatattttacatg-----atac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408181 293 + 70235451 ataatgtcctccaaattcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgcacc--acattttctttatccactcatctactgatggacacttaggttgagtccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agacatatatcagtgtctctttgaca---tgatatcatcacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatggtattttacatg-----atgc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099492 293 - 75711847 ataatgtcctccaaattcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgcacc--acattttctttatccactcatctactgatggacacttaggttgagtccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agacatatatcagtgtctctttgaca---tgatatcatcacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatggtattttacatg-----atgc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13658768 293 - 18804593 ataatgtcctccaaattcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgcacc--acattttctttatccactcatctactgatggacacttaggttgagtccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agacatatatcagtgtctctttgaca---tgatatcatcacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatggtattttacatg-----atgc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270646 293 + 18905526 ataatgtcctccaaattcatagatactgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgcacc--acattttctttatccactcatctactgatggacacttaggttgagtccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agacatatatcagtgtctctttgaca---tgatatcatcacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatccacatatacttcaaaacatgatattttacatg-----atgc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099208 293 - 72318688 ataatgtcctccaaattcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttctttatccactcatctactgatggacacttaggttgattccgtagcttggctattgtcaatagagctgtaatgaacatggcagtgcag--agacatatatcagtgtctctttgacatactgatatcatcacaaa----aataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatcttcatatacttcaaaacatgatattttacatg-----atgc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 435989 293 - 1517660 ataatgtcctccaaattcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgcacc--acattttctttatccactcatctactgatggacacttaggttgagtccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agacatatatcagtgtctctttgaca---tGATAtcaccacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatgatattttacatg-----atgc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532064 296 + 6513552 ataatgtcctccaaattcatagatattgttgcaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttctttatccactcatctattgatggacacttaggttgattccatagcttggctattgtgaatagagctgtaatgaacatggcagtgcag--agacgtatatcagtgtctctttgacatactgatatcatcacaaaaa-taataactat---atgtgatgcataggttaatta----g----atttagtcaaactgtaatctacatatacttcaaaacatgatattttacatg-----atat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105302945 295 + 117903854 ataatgtcctccaagttcattgatattgttgaaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttccttatccactcatctattgatggacacttaagttgattccatagcttggctattgtgaatagagctgtgatgaacgtggcagtgcagatatatatatatcagtatctgtttgatatactgatat---cacaaaaa-tgataactat---atatgatgtatatg----tta----g----atttcgtcaaaccataatctgcatatacttaaaaacatgatattttacatg-ataaatac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489466 289 - 31320352 ataatgtcctccaaggtcattgatattgttg-aaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttccttatccactcatctgttgatggacacttacattgattccatagctcagctattgtgaaaagagctgttatgaacatgacagtgcag--agatatatatcagtatctattcgatataccaatat---cacaaaaa-cgataactat---atgtgatgcatatg----tta----g----atttagtcaaaccataatctacatatacttaaaaac---atattttatgtg-aaaaatac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685250 292 + 2203405 ataatgtcctccaagttcattgatattgttgaaaatg------------------gttaaa-----------------------taatattgcactgtgtatatgtacc--acattttccttatccactcatctgttgatagacacttaggttgattccatagcttggctattgtgaatagagctgttatgaacatggcagtgcag--atatatatatcagtatctgtttgatatactgatat---cacaaaaa-tgat-actct---atgtgatgcatatg----tta----g----attaagtcaaaccgtaatctacctatactttaaaacatgatattttacgtg-ataaatac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3637809 293 - 14941987 ataatgtcctccaagttcattgatattgttgaaaatg------------------gctaaa-----------------------taatattccactgtgtatatgtacc--acattttccttatccactcatctattgatggacacttaggttgattctgtagcttggctattgtgaatagggctgttatgaacatggcagtgcag--agatatatatcagtatctgtttgatatactgatat---cacaaaaa-tgataactat---atgtgatgcatatg----tta----g----atttagtcaaaccataatctacatatacttaaaaacatgatattttacatg-ataaatac i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11265315 305 - 20685099 agtatgttgtctagattcatccacatggtcacaaagg------------------gcataatttcctttcttcttatgatccactagtgttctattgt-tatatatacctaacattttccttttctatttatc----------cctgtaggttgattcta-ggtttggctattgcgtataatgctgtaacaaaaagggaagtgtgg--a------------tttctctttgatgtactgatttcaccacaaaaagtaatgatgca---ggagaatgcatatgttaattagctgg----atttagttcatccacgat--acatctatttcaaaacttaatattgcacattaataaatat i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111871858 286 + 195471971 ACaatgtcacccatttccatccatattgctgcatatgatagtcttattaatatcagctgaa-----------------------taatgtccttttgtctaattatgcc--acatact-tatatacatttatctactgatagaaacatagattg-tcacatattttgaacattatatgtgg---cgaaatgagcatggaagtttag--GCACA---------GTCATTTCAGTa---------------aaaaa-tgattccactgggaggtaatgtacttgataatta----gcttagtttagttgatccattatgtacatataC------ACCTTATATTTTACCTG-----ACAA i mm10.chr1 I 237 I 395 e micMur3.chr19 41552123 1764 + 83067054 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112341955 0 - 122678785 C a score=465468.000000 s hg38.chr18_GL383571v1_alt 169871 63 + 198278 ttacaattttacctgtcaatttattttatttt----atttttctaa------tttttt-tttttttgagacaaa s panTro5.chr18 65079785 64 + 78221452 ttacaatttcacctgtcaatttaTtttatttt----atttttctaa-----ttttttt-tttttttgagacaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198785 64 + 77229886 ttacaatttcacctgtcaatttattttatttt----atttttctaa-----ttttttt-ttttttgtagacaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418297 68 + 17472758 ttacaattttacctgtcaatttaTTTTAtttt----atttttctaattt-tttttttt-tttttttgagacaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458819 64 - 152096393 ttacaattttacctgtcaatttaTTTTATTTT----ATTTTTATAT-----ATATATA-tttttttgagatgaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408474 69 + 70235451 ttacaattttacctgtcaatttaTTTTATTTT----Atttttctattttatttattta-tttttttgagacgga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099785 69 - 75711847 ttacaattttacctgtcaatttaTTTTATTTT----Atttttctattttatttattta-tttttttgagacgga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659061 69 - 18804593 ttacaattttacctgtcaatttaTTTTATTTT----Atttttctattttatttattta-tttttttgagacgga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13270939 70 + 18905526 ttacaattttacctgtcagttTCTTTTATTTT----ATTATTCTAttttatttatttattttttttgagacaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099501 69 - 72318688 ttacaattttacctgtcaatttaTTTTATTTT----Atttttctattttatttattta-tttttttgagatgga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436282 69 - 1517660 ttacaattttacctgtcaattTCTTTTATTTT----ATTATTCTAttttatttattta-tttttttgagacaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532360 69 + 6513552 ttacaattttacctgtcaatttaTTTTATTTT----Atttttctattttatttattta-tttttttgagatgga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303240 47 + 117903854 ttgtaattttacctgtcaat----------------------ttat----tttattta-tttatttgagacaga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489755 61 - 31320352 ttataattttacctgtcaatttattttctttt--------tcttat----tttatttg-tttatttgagacaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685542 61 + 2203405 ttgtaattttacctgtcaatttattttatttt--------tcttat----tttattta-ttgatttaagacaga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638102 61 - 14941987 ttataattttacctgtcaatttattttatttt--------tcttat----tttattta-tttatttgagacaca i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11265620 67 - 20685099 gtatcattttatgagtcaatttaagaaaTAATAAAAATATTTCCAG-----TTACTTA--TAATACAACATAAA i otoGar3.GL873546 C 0 I 513 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112341955 0 - 122678785 C a score=894842.000000 s hg38.chr18_GL383571v1_alt 169934 102 + 198278 gtctcacactgttgcccaggctggagagcaatggcacgatctcagctcactgcaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt s panTro5.chr18 65079849 102 + 78221452 gtctcacactgttgcccaggctggagagcaatgacacgatctcagctcactgcaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198849 102 + 77229886 gtctcacactgttgcccaggctggagagcaatgacacgatctcagctcactgcaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418365 101 + 17472758 gtctcacactgttgcccaggctggagagcaatggcacgatctcagctcactgcaacctc-gcctcccaggttcaagtgattct-ctgcctcagcctccccagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458883 102 - 152096393 gtctcatactgttgcccaggctggagagcaatggcacgatctcagctcactgcaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408543 102 + 70235451 gtctcacactgttgcctgggctggagagcaatggcgtgatctcagctcactgcaacctctgcctcccaggttccagtgattct-ctgcctcagcttccccagt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099854 102 - 75711847 gtctcacactgttgcctgggctggagagcaatggcgtgatctcagctcactgcaacctctgcctcccaggttccagtgattct-ctgcctcagcttccccagt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659130 102 - 18804593 gtctcacactgttgcctgggctggagagcaatggcgcgatctcagctcactgcaacctctgcctcccaggttccagtgattct-ctgcctcagcttccccagt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271009 102 + 18905526 gtctcacactgttgcctgggctggagagcaacggcacaatctgagctcactgcaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099570 102 - 72318688 gtctcacactgttgcccgggctggagagcaatggcgcgatctcagctcactacaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436351 102 - 1517660 gtctcacactgttgcctgggctggagagcaacggcacaatctcagctcactgcaacctctgcctcccaggttcaagtgattct-ctgcctcagcctccccagt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532429 102 + 6513552 gtctcacactgttgcctgggctggagagcaatggcacgatctcagctcactacaacctctgcctcccaggttcaagtgattgt-ctgcctcagcctccccagt i colAng1.NW_012115433v1 C 0 I 26 s calJac3.chr13 105303287 98 + 117903854 gtctctcactgtt-----ggctcgagtgcagtagtgcaatcttagctcaatgaaacctccacctgccaagttcaggtgattctcctgtctcaacctccttagt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489816 98 - 31320352 gtctctcactgtt-----gactagagtgcagcagtacactctcagctcgataaaacctccacctcccaagttcaagtgattctcctgtctcaacctccttagc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685603 98 + 2203405 gtctctcactgtt-----gactagagtgcagtagtgcaatcttagctcaataaaacctccacctcccaagttcaagtgattctcctgtttcaacctccttagt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638163 98 - 14941987 gtctctcactgtt-----ggctcgagtgcagtagtgcaatcttagctcaataaaacctccacctcccaagttcaggtgattctcctgtctcaacctccttagt i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112341955 0 - 122678785 C e otoGar3.GL873546 11265687 513 - 20685099 I a score=1538418.000000 s hg38.chr18_GL383571v1_alt 170036 167 + 198278 g-------------------gccaccacacttggctaatttttgtatttttaatagagacagggttttgccatgttggccaggctggtatcaaactcccgatctcaggtaatctgcctgcctcagcctcccaaagttctgagattaca------------------------------------gg------cgtgaaccactgtgcctggccTTACCTGTCAATTAA s panTro5.chr18 65079951 228 + 78221452 agctgggactataggtatgtgccaccacacttggctaatttttgtatttttaatagagacagggttttgccatgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgcctcagcctcccaaagttctgagattacaCTCAGAATCACTGATACACTGATACTCAGAATCACTGGTACACTCGTGAACCACTGTGCCTGGCCTTACCTGTCAATTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64198951 228 + 77229886 agctgggactataggtatgtgccaccacacttggctaatttttgtatttttaatagagacagggttttgccatgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgcctcagcctcccaaagttctgagattacaCTCAGAATCACTGATACACTGATACTCAGAATCACTGGTACACTCGTGAACCACTGTGCCTGGCCTTACCTGTCAATTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418466 186 + 17472758 agctgggactataggtacgtgccaccacacttggctaatttttgtatttttaatagagacagggttttgccatgttggccaggctggtctcaaactcctgatctcaggtaatctgcctgcctcagcctcccaaagttctgagattaca------------------------------------gg------cgtgaaccactgtgcctggccTTACCTGTCAATTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139458985 186 - 152096393 agctgggactataggtacgtgccaccacacttggctaatttttgtatttttaatagagacaggggtttgccatgttggccaggctggtctcaaacttcttacctcaggtaatctgcctgccttagcctcccaaagttctgagattaca------------------------------------gg------cgtgaaccactgtgcctggccTTACCTGTTAATTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408645 186 + 70235451 agctgggactataggtacatgccaccacacttggctaagttttgtatttttaatagagacaggattttgtcatgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgcctcggcctcccaaagttctgggattaca------------------------------------gg------tgtgaaccagtgtgcctggccTTACCTGTCaattaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63099956 186 - 75711847 agctgggactataggtacatgccaccacacttggctaagttttgtatttttaatagagacaggattttgtcatgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgcctcggcctcccaaagttctgggattaca------------------------------------gg------tgtgaaccagtgtgcctggccTTACCTGTCaattaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659232 186 - 18804593 agctgggactataggtacatgccaccacacttggctaagttttgtatttttaatagagacaggattttgtcatgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgccttggcctcccaaagttctgggattaca------------------------------------gg------tgtgaaccagtgtgcctggccTTACCTGTCaattaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271111 186 + 18905526 agctgggactataagtacgtgccaccacacttggctaagttttgtatttttaatagagacaggattttgtcgtgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgccccggcctcccaaagttctgggattaca------------------------------------ag------tgtgaaccagtgtgcctggccTTACCTGTCAATTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099672 186 - 72318688 agctggggctataggtatgtgccaccacacttggctaagttttgtatttttaatagagacaggattttgtcatgttggccaggctggtctcaaactcctgacctcaggtaatctgcctgcctcggcctcccaaagttctgggattaca------------------------------------gg------tgtgaaccactgtgcctggccTTACCTGTCAATTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436453 186 - 1517660 agctgggactataggtacatgccaccacacttggctaagttttgtatttttaatagagacaggattttgtcatgttggccaggctggtctcaaactcctgacctcgggtaatctgcctgcctcggcctcccaaagttctgggattaca------------------------------------gg------tgtgaaccagtgtgcctggccTTACCTGTCAATTAA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105303385 186 + 117903854 agctgggactataggcatgtgccaccacacctggctaatttttgtatttttaatagcgacaaggttttgccatgttggccagactggtctcaaactcctaacctcaggtgatccgcccgcctcggcctcccaaaattctgggattaca------------------------------------ag------taggaataactgcacctggccttacctgtcaattaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19489914 186 - 31320352 agctgggactatagggagatgccaccgcacctggctaatttttgtatttttaatagagacaaggttttgccatgttggccagactggtctcaaactctgaacctcaggtgatctgcccgccttggcctcccaaagttctgggattaca------------------------------------ag------tatgaAAAGCTACACTTGGCCTTACCTGTAGATTAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685701 186 + 2203405 agctgggaatataggcatgcgccatcacacctggctaattgatgtatttttaatagagacaaggttttgccatgttggccagactggtctcaaactcctaacctcaggtgatctgcctgcctcggcctcccaaagttctgggattaca------------------------------------ag------tatgaacaactacatctggccTTACCTGTCAATtaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638261 186 - 14941987 agctgggactataggcatatgccaccacatctggctgatttttgtatttttaatagagacaaggttttgccatgttggccagactgctctcaaactcctaagctcagatgatctgcccaccttggcctcccaaagttctgggattaca------------------------------------ag------tatgaacaactgcacctggccTTACCTGTCGATtaa i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112341955 0 - 122678785 C e otoGar3.GL873546 11265687 513 - 20685099 I e colAng1.NW_012115433v1 3532531 26 + 6513552 I a score=197749.000000 s hg38.chr18_GL383571v1_alt 170203 54 + 198278 aataat---aataat---aataatgaa---aataataata---------ataataatTGGCTAGCTACTTAA s panTro5.chr18 65080179 51 + 78221452 ---aat---aataat---aataatgaa---aataataata---------ataataatTGGCTAGCTACTTAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199179 51 + 77229886 ---aat---aataat---aataatgaa---aataataata---------ataataatTGGCTAGCTACTTAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418652 54 + 17472758 aataat---aataat---aataatgaa---aataataata---------ataataatTGGCTAGCTACTTAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459171 54 - 152096393 ---aat---aataat---aataatgaaaataataataata---------ataataatTGGCTAGCTACTTAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408831 42 + 70235451 ---------aataac---aataataac---aata---------------ataataatTGGCTACCTACTTAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100142 42 - 75711847 ---------aataac---aataataac---aata---------------ataataatTGGCTACCTACTTAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659418 42 - 18804593 ---------aataac---aataataac---aata---------------ataataatTGGCTACCTACTTAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271297 45 + 18905526 ---------aataacaataataataat---aata---------------ataataatTGGCTACCTACTTAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099858 48 - 72318688 ---------aataac---aataataat---aataataata---------ataataatTGGCTACCTACTTAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436639 57 - 1517660 ---------aataac---aataataac---aataataataataataattataataatTGGCTACCTACTTAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532557 54 + 6513552 ---aataacaacaac---aataataat---aataacaata---------ataataatTGGCTACCTACTTAA i colAng1.NW_012115433v1 I 26 C 0 s calJac3.chr13 105303571 13 + 117903854 -----------------aaa----------aaTA---------------ATAATA----------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490100 34 - 31320352 -----------------AAA---TAAT---AATA---------------ATGATAATTGGCCAGCTACTTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685887 37 + 2203405 -----------------aaataataat---aata---------------ataataatTGGCCAGCTACTTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638447 34 - 14941987 -----------------aaa---taat---aata---------------ataataatTGGCCAGCTACTTAC i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112341955 0 - 122678785 C e otoGar3.GL873546 11265687 513 - 20685099 I a score=497653.000000 s hg38.chr18_GL383571v1_alt 170257 49 + 198278 AATAGAACATAATTTTGTTTCAGATTCAAAGACGTAAAGTTTGATAGAG s panTro5.chr18 65080230 49 + 78221452 AATAGAACATAATTTTGTTTCAGATTCAAAGAAGTAAAGTTTGATAGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199230 49 + 77229886 AATATAACATAATTTTGTTTCAGATTCAAAGAAGTAAAGTTTGATAGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418706 49 + 17472758 AATAGAACATAATTTTCTTTCAGATTCAAAGAAGTAAAGTTTGATAGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459225 48 - 152096393 AATAGAACATAATTCTCTTTCAGATTCAAAGA-GTAAAGTTTGATAGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408873 48 + 70235451 AATAGAACATAATTTTGTTTCAGATTCAAAGA-GTAAAGTTTGATAGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100184 48 - 75711847 AATAGAACATAATTTTGTTTCAGATTCAAAGA-GTAAAGTTTGATAGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659460 48 - 18804593 AATAGAACATAATTTTGTTTCAGATTCAAAGA-GTAAAATTTGATAGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271342 48 + 18905526 AATAGAACATAATTTTGTTTCAGATTCAAAGA-GTAAAGTTTGATAGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099906 48 - 72318688 AATAGAACATAATTTTGTTTCAGATTCAAAAA-GTAAAGTTTGATAGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436696 48 - 1517660 AATAGAACATAATTTTGTTTCAGATCCAAAGA-GTAAAGTTTGATAGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532611 48 + 6513552 AATAGAACATAATTTTGTTTCAGATTCAAAGA-GTAAAGTTTGATAGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303584 40 + 117903854 --------GTAATTTTGTTTCAGATTCAGAGA-GTAGAGTTTGATAGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490134 48 - 31320352 GGTAGAACATAATTTTGTTTCAGATTCAGAGA-ATAAAGTTTGATAAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685924 48 + 2203405 GGCAGAACATAATTTTGTTTCAGATTCAGAGA-GTAAAGTTTGACAGAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638481 48 - 14941987 GGTAGAACATAATTTTGTTTCAGATTCAGAGA-GTAAAGTTCGATAGAG i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112341955 46 - 122678785 AATAGAACGTAAATTTGTTTCAGATCCAGAGA-GC--TGTTTGATGGAG i canFam3.chr1 C 0 I 417 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e otoGar3.GL873546 11265687 513 - 20685099 I a score=69780.000000 s hg38.chr18_GL383571v1_alt 170306 7 + 198278 ATGGGAG s panTro5.chr18 65080279 7 + 78221452 ATGGGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199279 7 + 77229886 ATGGGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418755 7 + 17472758 ATGGGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459273 7 - 152096393 ATGGGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408921 7 + 70235451 GTGGGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100232 7 - 75711847 GTGGGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659508 7 - 18804593 GTGGGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271390 7 + 18905526 GTGGGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099954 7 - 72318688 GTGGGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436744 7 - 1517660 GTGGGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532659 7 + 6513552 ATGGGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303624 7 + 117903854 ATGGGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490182 7 - 31320352 ATGGGAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685972 7 + 2203405 ATGGGAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638529 7 - 14941987 ATGAGGG i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e dasNov3.JH575754 521488 510 - 2150887 I e canFam3.chr1 112342001 417 - 122678785 I e otoGar3.GL873546 11265687 513 - 20685099 I a score=30501.000000 s hg38.chr18_GL383571v1_alt 170313 3 + 198278 G-------------------TA s panTro5.chr18 65080286 3 + 78221452 G-------------------TA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199286 3 + 77229886 G-------------------TA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418762 3 + 17472758 G-------------------TA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459280 3 - 152096393 G-------------------TA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408928 21 + 70235451 GTAGCA-CACACTTTCCCGCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100239 21 - 75711847 GTAGCA-CACACTTTCCCGCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659515 21 - 18804593 GTAGCA-CACACTTTCCCGCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271397 21 + 18905526 GTAGCA-TACACTTTCCCGCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099961 21 - 72318688 GTAGCA-CACACTTTCCCGCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436751 21 - 1517660 GTAGCA-CACACTTTCCCGCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532666 21 + 6513552 GTAGCA-CACACTTTCCTGCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303631 22 + 117903854 GTAGCACCACACTGTCCTGCTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490189 22 - 31320352 GTAGCACCACACTGTCCTGCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1685979 22 + 2203405 GTAGCACCACACTGTCCTGCTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638536 22 - 14941987 GTAGCACCACACTGTCCTGCTA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 521998 3 - 2150887 -------------------GTA i dasNov3.JH575754 I 510 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e canFam3.chr1 112342001 417 - 122678785 I e otoGar3.GL873546 11265687 513 - 20685099 I a score=87754.000000 s hg38.chr18_GL383571v1_alt 170316 7 + 198278 GGTAATT s panTro5.chr18 65080289 7 + 78221452 GGTAATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199289 7 + 77229886 GGTAATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418765 7 + 17472758 GGTAATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459283 7 - 152096393 GGTAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408949 7 + 70235451 GGTAATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100260 7 - 75711847 GGTAATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659536 7 - 18804593 GGTAATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271418 7 + 18905526 GGTAATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099982 7 - 72318688 GGTAATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436772 7 - 1517660 GGTAATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532687 7 + 6513552 GGTAATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303653 7 + 117903854 GGTAATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490211 7 - 31320352 GGTAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1686001 7 + 2203405 GGTAATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638558 7 - 14941987 GGTAATT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112342418 7 - 122678785 GATAATG i canFam3.chr1 I 417 C 0 s dasNov3.JH575754 522001 7 - 2150887 GCTAATG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I e otoGar3.GL873546 11265687 513 - 20685099 I a score=341601.000000 s hg38.chr18_GL383571v1_alt 170323 27 + 198278 ------TATGTGGGTGAAGccagccaggtgctt- s panTro5.chr18 65080296 27 + 78221452 ------TATGTGGGTGAAGCCAGccaggtgctt- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199296 27 + 77229886 ------TATGTGGGTGAAGCCAGccaggtgctt- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418772 27 + 17472758 ------TATGTGGGTGAAGCCAGccaggtgctt- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459290 27 - 152096393 ------TATGTGGGTGAAGccagccaggtgctt- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408956 27 + 70235451 ------TATGTGGGTGAAGCCAGccaggtgctt- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100267 27 - 75711847 ------TATGTGGGTGAAGccagccaggtgctt- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659543 27 - 18804593 ------TATGTGGGTGAAGCCAGccaggtgctt- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271425 27 + 18905526 ------TATGTGGGTGAAGCCAGccaggtgctt- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60099989 27 - 72318688 ------TATGTGGGTGAAGccagtcaggtgctt- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436779 27 - 1517660 ------TATGTGGGTGAAGCCAGccaggtgctt- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532694 27 + 6513552 ------TATGTGGGTGAAGCCAGccaggtgctt- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303660 27 + 117903854 ------TATGTGGGTGAAGccagccaggtgctt- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490218 27 - 31320352 ------TATGTGGGTGAAGccagccaggtgctt- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1686008 27 + 2203405 ------TATGTGGGTGAAGCAAGccaggtgctt- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638565 27 - 14941987 ------TATGTGGGTGAAGCCAGccaggtgctt- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11266200 27 - 20685099 ------CAACTGGGTGAAGtcagccagtggatc- i otoGar3.GL873546 I 513 C 0 s canFam3.chr1 112342425 27 - 122678785 ------Caggggggccaagtcagcaagataatg- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 522008 34 - 2150887 TGTATGGACGAGGATGAGTtcagccagttgattt i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e mm10.chr1 111872144 395 + 195471971 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I a score=2261065.000000 s hg38.chr18_GL383571v1_alt 170350 199 + 198278 gttgtcatgtggaacgtaaggacccatgtcacgaga-taatctga-ttttgcaaag-aaagccagaaatctgaac----ttgtatgggaaattatc-tgatttttct--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACGGCAAGG-TTTTGACTTCTGATTGTG-AGCTGGCTGCATG s panTro5.chr18 65080323 199 + 78221452 gttgtcatgtggaacgtaaggacccatgtcacgaga-taatctga-ttttgcaaag-aaagccagaaatctgaac----tcgtatgggaaattatc-tgatttttct--aatggcttaacttgttttgaaaac---------------------------------------tatgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAATGGCAAGG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199323 199 + 77229886 gttgtcatgtggaacgtaaggacccatgtcacgaga-taatctga-ttttgcaaag-aaagccagaaatctgaac----tcgtatgggaaattatc-tgatttttct--aatggcttaacttgttttgaaaac---------------------------------------tatgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACGGCAAGG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418799 199 + 17472758 gttgtcatgtggaacgtaaggacccatgtcacgaca-aaatctga-ttttgcaaag-aaagccagaaatctgaac----tcgtatgggaaattatc-tgatttttct--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACGGCAAGG-TTTTGACTTCTGATTGTG-AGCTAGATGCATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459317 199 - 152096393 gttgtcacgtggaacgtaaggacttatgtcacgaga-taacctga-ttttgcaaag-aaagccagaaatctgaac----tcgtataggaaattatc-tgatttttat--agtggcttaacttgttttgaaagc---------------------------------------tctgtg----aatgccaaataa-------------aatggattcgaatcataaactgcaagg-ttttgacttctgATTGTG-AGCTGGATGCATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57408983 199 + 70235451 gttgtcatgtggaatgtaaggaaccatgtcatgaga-taacctga-tcttgcaaag-aaagtaagaaatctgaac----ttgtatgggaaattatc-tgatttttat--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACTGCAAAG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100294 199 - 75711847 gttgtcatgtggaatgtaaggaaccatgtcatgaga-taacctga-tcttgcaaag-aaagtaagaaatctgaac----ttgtatgggaaattatc-tgatttttat--aatggcttaacttattttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACTGCAAAG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659570 199 - 18804593 gttgtcatgtggaatgtaaggaaccatgtcatgaga-taacctga-tcttgcaaag-aaagtaagaaatctgaac----ttgtatgggaaattatc-tgatttttat--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACTGCAAAG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271452 199 + 18905526 gttgccatgtggaacgtaaggaaccatgtcatgaga-taacctga-tcttccaaag-aaagtaagaaatctgaac----ttgtatgggaaattatc-tgatttttat--aatggcttaacttgttttgaaagc---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACTGCAAAG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60100016 199 - 72318688 gttgtcatgtggaatgtaaggaaccatgtcatgaga-taacttga-ttttgcaaag-aaagtgagaaatctgaac----ttgcatgggaaattatc-tgatttttat--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaatca-------------aaTGGATTCAAATCATAAACTGCAAAG-TTTTAACTTCTGATTGTG-AGCTGGATGCATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 436806 199 - 1517660 gttgccatgtggaacgtaaggaaccatgtcatgaga-taacctga-tcttgcaaag-aaagtaagaaatctgaac----ttgtatgggaaattatc-tgatttttat--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACTGCAAAG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532721 199 + 6513552 gttgtcatgtgggacgtaaggaaccacgtcatgaga-taacctga-ttttgcaaag-aaagtaagaaatctgaac----ttgtgtgggaaattatc-tgatttttat--aatggcttaacttgttttgaaaac---------------------------------------tctgtg----aatgccaaataa-------------aaTGGATTCAAATCATAAACTGCAGAG-TTTTGACTTCTGATTGTG-AGCTGGATGCATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303687 253 + 117903854 gttaccatgtggaacgtaaggccctatgtcacaaga-caacctga-ttttgcaaaa-aaagccagaaatctgaac----tcatatgggaaattatc-tgatttttat--aatggtgTAAATTGTCTTGAAAACaaataaaatatatctatttttaaaatatttttaaaaatatCTGTG----AATGCCAAATAAACTATATCTATAAAATGGATTCAAATCATAAACTTCAAGGTTTTTAACTTCTGACTGTGAAGTTGGATGCATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490245 214 - 31320352 gttaccatgtagaatgtaaggccctatgtcacatga-caacctga-ttttgcaaag-aaagccagaaatctgaac----tcatatgggaaattatc-tgatttttat--aatggcgtaaattgtcttgaaaac---------------------------------------tctatg----aatgccaaataaaatatatctATAGAATGGATTCAAATCATAAACTTCAAGGTTTTTAACTTCTGACTGTGAAGTTGGATGCATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1686035 214 + 2203405 gttaccatgtagaacgtaaggccctatgtcacatga-caacctga-ttttgcaaag-aaagccagaaatctgaac----tcatatgggaaattatc-tgatttttat--aatggtgtaaattgtcttgaaaac---------------------------------------tctatg----aatgccaaataaaatatatctATAAAATGGATTGAAATCATAAACTTCAAGGTTTTTAGCTTCTGACTGTGAAGTTGGATACATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638592 214 - 14941987 gttaccatgtggaatgtaaggccctgtgtcacaaga-caacctga-ttttgcaaag-aaagccagaaatctgaac----tcatatgggaaattatc-taatttttat--aatggcgtaaattgtcttgaaaac---------------------------------------tctgtg----aatgccaaataaaatatatctATAAAACTGATTCAAATCATAAACTTCAAGGTTTTTAACTTCTGACTGTGAAGTTGGATGCATG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11266227 213 - 20685099 cttgtcatgtgaaatg-agggccccatgcaccctgattagtctga-ttttgtaaggaaaagccacaaatccagac----ttccctgggaaactatc-tgacgtttac-aaatagcttaaaat-ttttgaaaac---------------------------------------tccata----aaggccaaataaaataTGCATATGAGATAGAATGACATCAGAAACTTCATGG-TTTTGA-TTTTAATTGAGAAGCTGAATGCACA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111872539 217 + 195471971 gttttcatgcacaacataaggccatgtttggcatga-taatctga-ttttgcaagg-aaagacaaaactctgggcagttttttttctttaagtatt-tcattttaaaaaaattgttgaaatt-ttatgaaaac---------------------------------------cctctg----aaggacacacaatatatacctgtgagatagattcAAATGCCAAGCTACTGGG-TTTTGA-TTCTTCCTGAGAAGTTGCAGGCACA i mm10.chr1 I 395 C 0 s canFam3.chr1 112342452 217 - 122678785 gtcatcatgtggaatata-ggcctcaagtgggcagc-tagtctgatttttgcaaag-aaagccagaaatctggat----ttatatgtgaaataacc-tgattttttt--aatggcttatttatttttgaaaac---------------------------------------atcgtgaaaaaagactaaataaaatatgaatgcgagatggattcagATCATACAAGGGAAAG-TTTTGACTTTGGGTTTAGAAGCTGGATGCAGT i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 522042 178 - 2150887 gtttccatatgggatg----------------gagc-cagattga-tttctcaagg-aaatccggaaatctggat----ttttatgtgaaattaccatgttttttta--aatggc-------------aaaat---------------------------------------ttttca----aaggctatatat-------ctgtgggatagattcagatcataaactgcaaga-ttttgacttttgATTTCAAAGCTGGGCACACT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41552123 1764 + 83067054 I e proCoq1.NW_012148742v1 1292513 1709 - 1406956 I a score=475452.000000 s hg38.chr18_GL383571v1_alt 170549 36 + 198278 AAAATAAATTTCCTGATTTTGCATATGCTAGTTCAG s panTro5.chr18 65080522 36 + 78221452 AAAATAAATTTCCTGATTTTGCATATGCTAGTTCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199522 36 + 77229886 AAAATAAATTTCCTGATTTTGCATATGCTAGTTCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5418998 36 + 17472758 AAAATAAATTTCCTGATTTTGCATATGCTAGTTCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459516 36 - 152096393 AAAATAAATTTCCTGATTTTGCATATGCTAGTTCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57409182 36 + 70235451 AAAATACATTTCCTGATTTTGCTTATGCTAGTTCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100493 36 - 75711847 AAAATACATTTCCTGATTTTGCTTATGCTAGTTCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659769 36 - 18804593 AAAATACATTTCCTGATTTTGCTTATGCTAGTTCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271651 36 + 18905526 CAAATACATTTCCTGATTTTGCTTATGCTAGTTCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60100215 36 - 72318688 AAAATACATTTCCTGATTCTGCTTATCCTAGTTCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 437005 36 - 1517660 CAAATACATTTCCTGATTTTGCTTATGCTAGTTCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532920 36 + 6513552 AAAATGCATTTCCTGATTTTGCTTATGCTAGTTCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303940 35 + 117903854 AAAATAAATTTCCTGATTTTGCATATGCTAGCT-AA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490459 36 - 31320352 AAAATAAATTTCCTGATTTTGCATATGGTAGCTAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1686249 36 + 2203405 AAAATAAATTTCCTGATTTTGCATATGCTAGCTAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3638806 36 - 14941987 AAAATAAATTTCCTGATTTTGCATATGCTAGCTAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1294222 36 - 1406956 AAAATAAATTTCCTGATTTTGCCTATGTTATCTCAA i proCoq1.NW_012148742v1 I 1709 C 0 s otoGar3.GL873546 11266440 36 - 20685099 ACAATAAATTTCCTGATCCTGCCTATGTTAGCTCAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111872756 35 + 195471971 AAATTAGGTGTCCTGTTTCTTATTTGACAAAGTCA- i mm10.chr1 C 0 C 0 s canFam3.chr1 112342670 36 - 122678785 AAAATTAATTTCCTGATTTTATCTTTGTTAGGCCAA i canFam3.chr1 I 1 I 3 s dasNov3.JH575754 522220 36 - 2150887 GAAAAAAATTTCCTGATTTTGCCTTTGCAAACATAG i dasNov3.JH575754 C 0 I 9 e micMur3.chr19 41552123 1764 + 83067054 I a score=11167115.000000 s hg38.chr18_GL383571v1_alt 170585 738 + 198278 CACCCCAGGAATTCAACTTTCCATTTTAATGCT----------GGG-AAAAAAAA-TACTATCTTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAACGGTCAAGGACTGGTCATGTATTCAAGCAATCTTATT----------------------TATT-CCTGCAGTTATGTATTAAG-----------------------------TTTTATttcctta----attcaataa-----------------atattcact-gagtgctcaataacgcactgtggaagacgct------gaaaaaccccaaggg------gaaaaaa-----tattcttcgccaaatggagc-tta--taatc-tgtggatagaaaaggcaC----AAAAG-GCAT---------GAATTATTACTTCA--TTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAATGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CAGTATTTTCAAGAGCAC----ATCTAATTTGATGAGGATGGA-AGATTGTTAATGACTCAGAAGCTGGGAAAATAGGT-AGA-AACTCAAATGTTGTAAGAAATCACTAGAATGTTTGCATTTT---TTCAGAGGTTCACTCCTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGTTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG s panTro5.chr18 65080558 739 + 78221452 CACCCCAGGAATTCAACTTTCCATTTTAATGCT----------GGG-AAAAAAAAGTACTATCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAACAGTCAAGGACTGGTCATGTATTCAAGCAATCTTATT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctcaataacgcactgtggaagacgct------gaaaaaccccaaggg------gaaaaaa-----tattcttcgccaaatggagc-tta--taatc-tgtggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTCA--TTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAATGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGTAC----ATCTAATTTGATGAGGATGGA-AGATTGTTAATGACTCAGAAGCTGGGAAAATAGGT-AGA-AACTCAAATGTTATAAGAAATCCCTAGGATGTTTGCATTTT---TTCAGAGGTTCACTCCTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGCAGAAAGGAATGCTGGAATCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGTTTGGCTATTTCTCCAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64199558 739 + 77229886 CACCCCAGGAATTCAACTTTCCATTTTAATGCT----------GGG-AAAAAAAAGTACTATCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAACAGTCAAGGACTGGTCATGTATTCAAGCAATCTTATT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctaaataacgcactgtggaagacgct------gaaaaaccccaaggg------gaaaaaa-----tattcttcgccaaatggagc-tta--taatc-tgtggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTCA--TTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAATGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----ATCTAATTTGATGAGGATGGA-AGATTGTTAATGACTCAGAAGCTGGGAAAATAGGT-AGA-AACTCAAATGTTGTAAGAAATCCCTAGGATGTTTGCATTTT---TTCAGAGGTTCACTCCTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGTTTGGCTATTTCTCCAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5419034 739 + 17472758 CACCCCAGGAATTCAACTTTCCATTTTAATGCT----------GGG-GGAAAAAAATACTATCTTTTCTTTTAAGTTATCTACTACTGTAA-CTCCTCTCAGTCTGGAACAGTCAAGGACTGGTCATGTATTCAAGCAATCTTATT----------------------TATT-CCTACAGTTATGTATTAAG-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctctataacgcactgtgccagacgct------gaaaaaccccaaggg------gaaaaaa-----tattcttcgccaaatggagc-tta--taatc-tgtggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTCA--TTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAATGGCTTTGAAAGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----ATCTAATTTGATGAGGACAGA-AGATTGTTAATGACTCAGAAGCTGGGAAAATAGGT-AGA-AACTCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---TTCAGAGGTTCACTCCTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGTTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139459552 739 - 152096393 CACCCCAGGAATTCAACTTTCCATTTTAATGCT----------GGG-GAAAAAAATTACTATCCTTTCTTTTAAGTTGTCTACTACTATAA-CTCCTCTCAGCCTGGAACAGTCAAGGACTGGCCATGTATTCAAGCAATCTGATT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATttcttta----attcagtaa-----------------atattcact-gagtgctcaatagtgcactgtgccagacgct------gaaaaaccacaaggg------taaaaaa-----tattcttcgccaaatggagc-tta--taatc-tgtggatagaaaaggcaC----AAAAG-GCAT---------GAATTATGACTTCA--TTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAATGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----ATGTAATTTGATGAGGATGGA-AGATAGGTAATGACTCAGAAGCTGGGAAAATAGGT-AAA-AACTCAAATGTTGTAAGAAATCACTAGAATGTTTGCATTTT---TTCAGAGATGCACTCCTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAATCTGGCTGACTACTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAGATT------------------CAAAAACAAAGAA-------TGTAGTAGTTTGGCTATTTCTCTGGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57409218 739 + 70235451 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------GGG-AAAAAAAA-TACTGTCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAGCAGTCAAAGACTGCTGATGTATTCAAGCAATCTTACT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctcaataatgcactgtgccagacgct------gaaaaacctcaaggg------gaaaaaa-----tattcttcgccaaatggaac-tta--caatc-tttggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTAA-TTTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAAGGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----GTCTGATTTGATGAGGATGGA-AGATTGGTAATGACTCAGAAGCTGGGAAAACAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---GTCAGAGGTGCACTCTTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGTTGGCTGACTGCTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63100529 739 - 75711847 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------GGG-AAAAAAAA-TACTGTCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAGCAGTCAAAGACTGCTGATGTATTCAAGCAATCTTACT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATttcctta----attcaataa-----------------atattcact-gagtgctcaataatgcactgtgccagacgct------gaaaaacctcaaggg------gaaaaaa-----tattcttcgccaaatggaac-tta--caatc-tttggatagaaaaggcac----aaaag-gcat---------gaatgattaCTTAA-TTTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAAGGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCCAGAGCAC----GTCTGATTTGATGAGGATGGA-AGATTGGTAATGACTCAGAAGCTGGGAAAACAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---GTCAGAGGTGCACTCTTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCGAGCTGGCTGACTGCTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13659805 739 - 18804593 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------GGG-AAAAAAAA-TACTGTCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAGCAGTCAAAGACTGCTGATGTATTCAAGCAATCTTACT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTCATTGCCtta----attcaataa-----------------atattcact-gagtgctcaataatgcactgtgccagacgct------gaaaaacctcaaggg------gaaaaaa-----tattcttcgccaaatggaac-tta--gaatc-tttggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTAA-TTTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAAGGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----GTCTAATTTGATGAGGATGGA-AGATTGGTAATGACTCAGAAGCTGGGAAAACAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---GTCAGAGGTGCACTCTTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGTTGGCTGACTGCTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13271687 742 + 18905526 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------GGG-AAAAAAAA-TACTGTCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAGCAGTCAAAGACTGCTGATGTATTCAAGCAATCTTACT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctcaataatgcactgtgccagacgct------gaaaaacctcaaggg------gaaaaaa-----tattcttcgccaaatggaac-tta--caatc-tttggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTAA-TTTTTTT---CT--GTATTTTAATCATTGCTTCATCCTATTTAAATGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----GTCTAATGTGATGAGGATGGA-AGATTGGTAACGACTCAGAAGCTGGGAAAACAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---GTCAGGGGTGCACTCTTTCTGTTCTAATA-CTGGAGCCCAGCCAGGCACAAAGCAAGCTGGCTGGCTGCTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCTAGCCAGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGAAGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60100251 739 - 72318688 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------TGG-GAAAAAAA-TACTGTCCTTTCTTTTAAGTTATCTACCGCTATAA-CTCCTCTCAGTCTGGAGCAGTCAAAGACTGCTGATGTATTCAAGCAATCTTACT----------------------TATT-CCTACAGTTGTGTATTAAG-----------------------------TTTTATtttctta----attcaataa-----------------atattcact-aagtgctcaataatgcactgtgccagacact------gaaaaacctcaaggg------gaaaaaa-----tattcttcgccaaatggaac-tta--caatc-tTTGGATAGAAAAGGCAC----AAAAG-GCAT---------GAATTATTACTTAA-TTTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAATAGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----GTCTAATTTGATGAGGATGGA-AGATTGGTAATGACTCAGAAGCTGGGAAAACACAT-AAA-AACCCAAATGTTGTAGGAAATCACTAGGATGTTTGCATTTT---GTCAGAGGTGCACTCTTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGTTGGCTGACTACTGCAGAAAGGAATGCTGGAACCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-------TGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 437041 738 - 1517660 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------GGG-AAAAAAAA-TACTGTCCTTTCTTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAGCAGTCAAAGACTGCTGATGTATTCAAGCAATCTTACT----------------------TATT-CCTGCAGTTGTGTATTAAG-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctcaataatgcactgtgccagacgct------gaaaaacctcaaggg------gaaaaaa-----tattctttgccaaatggaac-tta--caatc-tttggatagaagaggcac----aaaAG-GCAT---------GAATTATTACTTAA--TTTTTT---CT--GTATTTTAATCATTACTTCATCATATTTAAAGGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CATTATTTTCAAGAGCAC----GTCTAATGTGATGAGGATGGA-AGATTGGTAACGACTCAGAAGCTGGGAAAACAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---GTCAGGGGTGCACT-TTTCTGTTCTAATA-CTGGAGCCCAGCCAGGCACAAAGCAAGCTGGCTGACTGCTGCAGAGAGGAATGCGGGAACCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAATT------------------CAAAAACAAAGAA-----TCTGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGAAGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3532956 736 + 6513552 CACCCCAGGAATTCAACTTCCCATTTTAATGCT----------GGG-AAAAAAAC-TACTGTCCTTTCTTTTCAGTTATCTACTACTGTAA-CTCCTCTCAGTCTGGAGCAGTCAGAGACTGCTGATGTATTCAAACAATCTTACT----------------------TATT-CCTGCAGTTGTGTATT--G-----------------------------TTTTATTTCCtta----attcaataa-----------------atattcact-gagtgctcaataatacactgtgccagacact------gagaaacctcaaggg------gaaaaaa-----tattcttcaccaaatggaac-tta--caatc-tttggatagaaaaggcac----aaaAG-GCAT---------GAATTATTACTTAA-TTTTTTT---CT--GTACTTTACTCATTACTTCATCATATTTAAATGGCTTTGAAGGTTCATC-TATATACTGAT-T-----C-CCTTATTTTCAAGAGCAC----GTCTAATTTGATGAGGATGGA-AGATTGGTAATGACTCAGAAGCTGGGAAAACAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTATGATGTTTGCATTTT---GTCAGAGGTGCACTCTTTCTGTTCTAATACCTGGAGTCCAGCCAGGCACAAAGCAAGTTGGCTGACTACTGCAGAAAGGAATGCTGGAATCTCTCTTGCTGACCTGTTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGAAA-T------------------CAAAAACAAAGAA-------TGTAGTAGGTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTC-C-TGCAGCTGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105303975 738 + 117903854 CACCCCAGGAATTCAACTTTCCATCTGAATTCT----------GGGGAAAAAAAAGTACTATTCTTTCTTTTAAGTTATCTACTGCTATAA-CTCCTCTCAGTCTGGAACAATCAAAGACTGGTGATATGTTCAAGCA-------T----------------------TACT-ACTGCAGATGTGTATT--A-----------------------------TTTTATttcctta----atttgataa-----------------atattcact-gagtgcccagtactgcactgtgccagacact------gagaaacctcaaggg------gaaaacaacattcattcttcaccaagtggagc-tta--gaatc-tgtggatag-aaaggtac----aaAAG-GCGT---------GAATTATTACTTCA--TTTTTT---TTCTGTGTTTTAATCATTACTTCATCATATTTAAATGACTTTGAAGGTTCATC-TATATCCTGAT-T-----C-AATTATTTTCAAAATCAT----GTTTAAATTGATGAAGATGGA-AGATTAGTAATGACTCAGGAGCTGGAAAAATAGGTAAAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---TTCAGAAGTTCACTCTTTCTGTTCTAATACCTGGAATCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGAAGGAAGGAATGCTGAACGCTCTCTCGCTGACCTGCTTCCACAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGACAAAATA------------------CAAAAACAAAGAT-------CTTAGTAGTTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTT-C-TGCAGCTGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19490495 730 - 31320352 CACCCCAGGAATTCAACTTTTCATCTGAATTCT----------GGG---AAAAAAGTGCTATCCTTTCTTTTAAGTTATCTACTGCTATAA-CTCCTCTCAGTCTGGAACAGTCAAAGACTGGTGATATATTCAAGCA-------T----------------------TATT-CCTGCAGATGTGTATTAAA-----------------------------TTTTATttcctta----atttgataa-----------------atatttacc-gagtgcccagtaatgcactatgccagacaca------gagaaagctgaaggg------gaagaaaa----cattcttcaccaaatggagc-tta--gaaac-tgtggatagaaaAGGTAC----AAAAG-GCAT---------GAATTATTACTTCA--TTTTTT---TC---TGTTTTAATCATTACTTCATCATTTTTAAATGACTTTGAAGATTCATC-TATATCCTGAT-T-----C-AATTATTTTCAAAATCAT----GTTTAAATTGATGAGGATGGA-AGATTAGTAATGACTCAGGAGCTGGGAAAATAGGT-GAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---TTCAGAAGTGCACTCTTTCTGTTCTCATACCTGGAATCCAGCCAGGCACGGAGCAAGCTGGCTGACTACTGAAGAAAGGAATGCTGAATCCTCTCTTGCTGACCTGCTTCCAGAGTTTCTAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAACGAGGAAATT------------------CAAAAACAAAGAA-------CTTAGTAGTTTGGCTATTTCTCTAGAAGCCGTTGGGGATGAGACTGAGCC--ATTTTT-C-TGCAGCTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1686285 734 + 2203405 CATCCCAGGAATTCAACTTTCCATCTGAATTCT----------GTG-AAAAAAAAGTACTATCCTTTCTTTTAAGTTATCTACTGCTATAA-CTCCTCTCCGTCTGGAACAGTCAAAGACTGGTGATATATTCAAGCA-------T----------------------TATT-CCTGCAGATGTGTATTAAA-----------------------------TTTTATttcctta----atttgataa-----------------atattcact-gagtgcccagtaatgcactgtgccagacact------gagaaacctcaaggg------aaagaaaa----cattcttcatcaaatggagcttta--gattc-tgtggatagaaaagggac----aaAAG-GCAT---------GAATTATTACTTCA--TTTTTT---GT--GTGTTTTAATCATTACTTCATCATATTTAAATGACTTTGAAGGTTCATC-TATATCCTGAT-T-----C-AATTATTTTCAAAATCAT----ATTTAAATTGATGAGGATGGA-AGATTAGTAATGACTCAGGAGCTGGGAAAATAGGT-AAA-AACCCAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---TTCAGAAGTGCACTCTTTCTGTTCTAATACCTGGAATCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGAAGAAAGGAATGCTGAACCCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAACGAGAAAATT------------------CAAAAACAAAGAA-------CTTAGTAGTTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTT-C-TGCAGCTGG i cebCap1.NW_016107689v1 C 0 I 71 s aotNan1.NW_018502140v1 3638842 732 - 14941987 CACCCCAGGAATTCAACTTTCCATCTAAATTCT----------GGGGAAAAAAAAGTACTATCCTTTCTTTTAAGTTACCTACTGCTATAA----CTCTCAGTCTGGAACAATCAAAGACTGGTGATATATTCAAGCA-------T----------------------TATT-CCTGCAGATGTGTATTAAA-----------------------------TTTTATttcctta----atttgataa-----------------atattcact-aactgcccagtaatgcactgtgccagacact------gagaaacctcaaggg------gaaaaaa-----cattcttcaccaaatggagc-tta--gaatc-tgtgtatagaaacggtac----aaAAG-GCAG---------GAATTATTACTTCA--TTTTTT---TTCTGTGTTTTAATCATTACTTCATCATATTTAAATGACTTTGAAGGTTCGTC-TATATCCTCAT-T-----C-AATTATTTTCAAAATCAT----GTTTAAATTAATGAGGATGGA-AGATTAGTAATGACTCGGGAGCTGGGAAAATAGGT-AAA-AACCTAAATGTTGTAAGAAATCACTAGGATGTTTGCATTTT---TTCAGAAGTTCACTCTTTCTGTTCTAATACCTGGAATCCAGCCAGGCACAAAGCAAGCTGGCTGACTACTGAAGAAAGGAATGCTGAACCCTCTCTTGCTGACCTGCTTCCAGAGTTTCCAGCACAGCT----AGCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAACGAGGAAATT------------------CAAAAACAAAGAA-------CTTAGTAGTTTGGCTATTTCTCTAGGAGCCCTTGGGGATGAGACTGAGCC--ATTTTT-C-TGCAGCTGG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41553887 747 + 83067054 CACCCCAGGAATATAACTTCCCATTTTAATACT----------AGA-GAGAAAAG-TATCATCATTTCTTTTAAGTTATCTACTACTAGAA-CTCCTCTCAGTCTGGAATAGTCAAAGTCTGATGATGTAGTCAAATAATCATATT----------------------TTTA-TCTGGAGAAGTATATTAAA-----------------------------TTTTATTTCCttaatttattcaataa-----------------atattcact-gagtgctcaataatgcaccatgccagacact------gagaaacctcaagggaaaaaaaaaaaaa-----aagtcctagccaaatagagc-tta--taatcttgtggatagaaaaggcaT----GAAAG-GCAT---------GAATTATTACTTCA-TTTCTTC---CT--GTATTTTAATCATTACTTCATCTGATTTAAATGCCTTTGAGGGTTCATC-TATATCTTGAT-T-----C-CATTATTTTCAAAAGCAC----ATTTAAATTGATGAGGACAGA-AGATTAGTAGTGACTCAGAAGCTTGGAAAATAGAT-AGA-AATCTAAATGTTGTAAGACATCTCGAGGATGTTTGCATTTT---TTCAGAGCTGCACCCCTTGTAAT-----ACCTGGAGTCTAGCCAGGCACAAAGCAAGCTGACTTACTCCCGCAGAAAGGAATCCTGCAACCTCTCTGGCTGACATGCCTCCAGAGTTTCCAGCACAGCT----AGCCAGAGTCTTCCT----------------------------------------------------------------------------------ATAGACAATGAGAAAATT----------------AAAAAAAACAACGAA-------TATGGTAGTTCAGCTATTTATTTATCAATTTTGGGGGATGAGACTGAGCC--AGTTTT-C-TGCAGCTGG i micMur3.chr19 I 1764 C 0 s proCoq1.NW_012148742v1 1294258 733 - 1406956 CACCCTGGGAATTCAACTTCCGATTTTAATACT----------AAA-GAGAAAAG-TATCATCATTTCCTTTAAGTTATCTACTACTATAA-CTCCTCTCAGTCTGGAA----CAAAGACTGATGATGTATTCAAATAATCATATT----------------------TTTA-TCTGTAGAAGTATATTAAA-----------------------------TTTTATTTCCttgatttattcaataa-----------------atactcact-gagtgctcaataatgcactgtgccagacact------gagaaacctcaaggg------aaaaaaa-----aattcctagccaaa-agagc-tca--taatcttgtggatagaaaagacat----gaaag-gaat---------gaattattacttca-tttcttc---ct--gta-tttaatcattacttcatctgatttaaatggcTTTGAAGGTTAATT-TATATTTTGAT-T-----C-CATTATTTTCAAAAGCAC----ATTTAAATTGATGAGGACGGA-AGATTAGTAGTGACTTAGAATCTTGGAAAATAGAT-AGA-AATCTAAATGTTGTAAGACATCTCTAGGATGTTTGCATTTT---TTCAGAGCTGCACCCCTTCTAAT-----ACCTGGAGTCCAGCCAGGCACAAAGCAAGCTGACTGACTCCTGCAGAAAGGAATCCTGCAACCTCTCTTGCTGATATGCTTGCAGAGTTTCCAGCACAGCT----ATCCAGAGACTTCCT----------------------------------------------------------------------------------ATAGACAATGAAAAAATT------------------CAAAAACAACAAA-------TGTGGTAGTTCAGCTATTTATCTATCAGCTCTTAGGAATGAGACTGAGCT--GTTTTT-C-TGCAGCTGG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11266476 756 - 20685099 CACCCTGGGAATTCAACTTGCCATTTTAATCCTATCACATTAAAAT-GAGTAAAG-TATTGTT-TTTCTTTTAAGTTATCTACTACTACAA-TTCCTCTCAGTCTGGAACAGTCACAGACTGATGATGTAATCAAATAATCATATT----------------------TTTA-TCTGCAGAAATATATTGAA-----------------------------TTATATTTCCttaattaattcaataa-----------------atattcact-gagtgctcagtaatgcactgtgctagacaca------gagaaccctcaaggg---------aaaa-----aaacctttgccaaatagatc-cta--taatcttgtggatagaaaaggcat----aaaag-acat---------gaatTATTACTCCA-TTTTTTC---TG--GTATTTTAATCATTACTTCGTCGGATTTAAATAGCTTTGAAGGCTCATC-TATATCTTGGT-T-----C-CATTATTTTCTAAAGTACACTTATTTAAATTGATGAGGATGAA-AGATTAGTAGTGACTCAGGAGCTTGGACAATAGAT-AGA-AATCTTAATGTTGTGAGACATCTCTACGGTGTTTGCATTTT--CTTCAGAGCCGCACCCCTTCTGTTACATGACCTGGAGTCCAGCCAAGCACAAGGCAAGCTGACGGACGACTGCAGAAAGGAATCCTGGAACCTCTCTTGCTGACATACCTCCAGAGTTCCCAGCACAGCT----CGCCAGAGACTTCTT----------------------------------------------------------------------------------ATAGACAATGAGAAAATT------------------CAAAAACAATGGA-------TGTAGTAGTTCAGCTATTTATCTATCAGCTCTTGGGGGTAAGACCGAGCC--ATTTTTAA-TGCAGCTGG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111872791 872 + 195471971 ----CCAGAAATTA----TTCTATTT-AATGCC----------AAG-GAGCAAAC-TATCATCTTATTTTTGAAGATAT-TACTCCAAGAAATTCTTCTGTGTTTGGAAAAGTTAATGGCTGGTGATGTATTCAAATTATCACATCAGCAAAGAAAGCTTTGCATGTATTTT-CCTAAATTTAGTCAATAAATAGGCTGAACTATCataaattactattttttatatttattta------tCAATAACTGAACTGAGAGTTTAGATATTGAGTGGAGAGCTTAGTTATTCATTGTACCAGATATT------GGGAATGTTATGGGG------AAAAAAG--------TTGTAGCCCAATGAA---TAA--CACTT-CACTG------------------AGAG-GCAT---------GAATTATTACTTTA--ATTTTT---CT--GTATTTTAATCATTGGCTCATCAAATTTAAATGACTTTGAATGATCATTATGAATCTTGTT-T-----CTCATTATTTTTCAA---AC----ATATAAACTGGTGAAAATTGA-AAATTTGTAGTGATTTAGGAACTACATAAATAGAC-ATA-GATAGAAACATCA-ATGGAATCTCTAAGATATC-----------TTCTAAGCTGCATCCATTCTGTTCTAACACCTGGAGTGAAGCCAGACAGCATGCAAGCTGGCTGAGGCTTGCAGAAAGGAATCCTGGAAA---TGTGGCTGAACTGCTTCCAGAATTTCCAAAATATCT----ACTTAGAATCTTCATTTATACAGGAGAGAACTAATAAATAATAACATataggtagataggtagaaaaatagatagatgattgatagatagatgatagatagatagatagaaaatagataagcagaaagacaaacaaatacatagaAAATAACTCATGATAGATCAGCTTTTTATTTAGCAACAATTGGTGATGAGACAAAGCA--TTCTCC-CTTGAACCTGG i mm10.chr1 C 0 C 0 s canFam3.chr1 112342709 768 - 122678785 TATCCCAGGATACCAACTTTC-ATTTTAATGCG----------GGA-GAGAAAGG-TGCTGTTCTTTCTCTTAAGTGACCTACTACTATGA-CCCCTCTCAGTCTGGAACTATCAACGATTGATGATATATTAAAAGA---GTATT----------------------TATA-TCTGCAGAAATGTGTTAAA-----------------------------CTTTATTTCCttcacttgttgagtaa-----------------atattcact-aagcacacgatagtgcactgtgccaggcactgttTGGGGGATCCTCTATGGG------AAAAAAA-----AATTACCAGACAAATGGAGC-TTATCTAATCTTATGCACAGAAAAGTCATAATGAAGAG-GCATAATAGTTAGGAATTATTACTTCAGTTGTTTT---CT--GTATTTTAATCATTACTTCATAGGGTTTAAATGTCTTTGAAGGATCCTC-TATATCTCACT-TGCTGCC-CATTATTTTCAAAAGCAC----ATTTAAATTGATGAGGATGGAGAGATTAGTAACGACTCAGGAACTGGGAAAATGGAT-AAA-AATCGAAACGTTGTGAGAAATCTCTAGGATGTTTGCACTTT---TTCAGAGCTGCACCCCTTGTGTTATAAAACCTGGAGGCCAGCCAGGCACCAAGCAAGCTGGCTGACTACCGCAGAAAGGAATCCTGGATCCTCTCTTGCTGACCTGTTTCCAGACTTTCCAGCACAGCT----AGCCAGAGATTTCCT----------------------------------------------------------------------------------ATAGACAATGAGGGAATT------------------CAAAAACAACGAA-------TGTGGTAGTTCAGCTATTTATCTAGGGACCGCTGGGGATGAGACTGAGCC--ATTTCC-C-AGCAGCTGG i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 522265 736 - 2150887 TGCCCCAAGAGTTCAACTCCTCATTTTAATGTT----------GGG-GTGAG----TGTCATCTTTTATCTTAATTAATCTACCACTA-AA-TTCCACTTAGTCTGAAACA------GACTGATGGAGTGTTCAAATAATCATATT----------------------TTTTGACTTTAGAAAT---TTAAA-----------------------------CTATATTCTCttcatttattccataa-----------------atatttatt-gggtgcttaataatatgttatgccaggcactactt--gagatatctc-tggg------gaAATTT-----TTTTCCCCTCCAAATGACGT-TTA--TAATCTTGTGGCTATTAGAGGCAT----AAAAATGCAT---------GGATTGTTGCTTCa--atttttaaatt--ttattttaattattaCTTCAGCAGATTTAAATGTCTTTGAAGGATCCTC-TATATGTTACTGT-----C-CATTATTTTCAAAACTAC----ATTTACATTGATGAGAAAGTC-AAATTAGTAATGACTCAGGAGCTGAGAAAATGGAA-AAACAGCCTAAATGT---GAGAAATCTCTCAAATGTTTGCATTTTTTTTTCAGAACGGCACCCCTTCTGTTATAATACCTGGAGTCCAGCCAAACACGAAGGATGCTGACTGACTACTGC-GAAAAGATTCCTGGAACCTGTCTGGCTG-----TTTCCAGAGTTTCCCGCACAGCT----AGCCAGAGACGTCCT----------------------------------------------------------------------------------ATAGGCAATGAGAGAATT------------------CAAAAACAGCAAA-------TGTGGAAGTTCAGCTATTTATCTAGGATTCATTCGGGAGAGGACTAAGGCTGTTTTCC-C-CGTATCTGG i dasNov3.JH575754 I 9 C 0 a score=736647.000000 s hg38.chr18_GL383571v1_alt 171323 57 + 198278 CTGCAAAGCAGGCCACTGAAAAAGATCAGTATGAAAGAACAAGG-CA-TACTGTTGGTA s panTro5.chr18 65081297 57 + 78221452 CTGCAAAGCAGGCCACTGAAAAAGATCAGTATGAAAGAACAAGG-CA-TACTGTTGGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64200297 57 + 77229886 CTGCAAAGCAGGCCACTGAAAAAGATCAGTATGAAAGAACAAGG-CA-TACTGTTGGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5419773 57 + 17472758 CTGCAAAGCAGGCCACTGAAAAAGATCAGTATGAAAGAACAAGG-CA-TACTGTTGGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139460291 57 - 152096393 CTGCAAAGCAGGCCACTGAAAAAGATCAGTATGAAAGAACAGGG-CA-TACTGTTGGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57409957 57 + 70235451 CTGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAATAACAGGG-CA-TACCATTGGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63101268 57 - 75711847 CTGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAATAACAGGG-CA-TACCATTGGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13660544 57 - 18804593 CTGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAATAACAGGG-CA-TACCATTGGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13272429 57 + 18905526 CTGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAATAACAGGG-CA-TGCCATTGGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60100990 57 - 72318688 CTGCAAAGCAGGCCACTGAAAAGTATCAGTATGAAATAACAGGG-CA-TACCGTTGGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 437779 57 - 1517660 CTGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAATAACAGGG-CA-TACCATTGGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3533692 57 + 6513552 CTGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAATAACAGGG-CA-TACCATTGGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105304713 55 + 117903854 CCGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAAGAATAGGG-CA-TACCATTGG-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19491225 55 - 31320352 CCACAAAGCAGGCTGCTGAAAAGGATCAGTATGAAAGAACAGGG-CA-TACCATTTG-- i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3639574 55 - 14941987 CCGCAAAGCAGGCCACTGAAAAGGATCAGTATGAAAGAACAGGG-CA-TACCATTGG-- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41554634 57 + 83067054 CTGCAAAGCAAGCCACAGAGAAGGCACATTATGGGAGAACAGGG-CA-TGATGTTGGCA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1294991 57 - 1406956 CTGCAAAGCAAGCCACAACAAAGGTGCGTTACAGGAGAACAGAG-TA-TGGTGTTGGCA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11267232 57 - 20685099 TCACAAAGCAAACCACGGAGAAGACTCATTACAAAAGAACAGGG-TA-TGATGTTGTCA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111873663 52 + 195471971 CTTCTAAACTGATCACTGAGAAGACT-----TAAAAGGACAGAG-ca-taatgttgttc i mm10.chr1 C 0 I 76 s canFam3.chr1 112343477 58 - 122678785 CCGCCACGCAGGCCATCGAGAAGACTCAGGAGGAAAGAACAGGGCCA-TCCCGCTGACA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 523001 58 - 2150887 CTGCAAAGCAAGCCATGGAGAAGGCTCAGTATGAAAGAACAGGA-CAGGAGTGTTGGCA i dasNov3.JH575754 C 0 C 0 e cebCap1.NW_016107689v1 1687019 71 + 2203405 I a score=3283345.000000 s hg38.chr18_GL383571v1_alt 171380 241 + 198278 TATGCGTCAC----------------------TGTGGGCCAGAGC---TTTTTGTCATA---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATC-CTCT--TTGGTAACCGTTTTAAAAAT----AATACATAGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAATAGTT-CCTGAGCTGGAAATGTGGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------GGCAGGTACATC s panTro5.chr18 65081354 241 + 78221452 TATGCGTCAC----------------------TGTGGGCCAGAGC---TTTTTGTCATA---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATC-CTCT--TTGGTAACCGTTTTAAAAAT----AATACATAGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAATAGTT-CCTGAGCTGGAAATGCGGACTGCTTGGCCTGGGATCAAGTCCAGAATTT-----------GATGTTCTT-----------------------------GGCAGGTACATC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64200354 241 + 77229886 TATGCGTCAC----------------------TGTGGGCCAGAGC---TTTTTGTCATA---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATC-CTCT--TTGGTAACCGTTTTAAAAAT----AATACATAGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAATAGTT-CCTGAGCTGGAAATGCGGACTGCTTGGCCTGGGATCAAGTCCAGAATTT-----------GATGTTCTT-----------------------------GGCAGGTACATC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5419830 241 + 17472758 TATGCGTCAC----------------------TGTAGGCCAGAGC---TTTTTGTCATA---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATC-CTCT--TTGGTAACTGTTTTAAAAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAATAGTT-CCTGAGCTGGAAATGCGGACTGCTTGGGCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------GGCAGGTACATC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139460348 242 - 152096393 TATGCGTCAC----------------------TGTGGGCCAGAGC---TTTTTGTCATG---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGGTAACCATTTTAAAAAT----AATACATAGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAATAGTT-CCTGAGCTGGAAATGTGGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------GGCAGGTACGTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410014 241 + 70235451 TATGCGTCAA----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------GGATTCAATCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGATAACCATTTTAAGAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAGTAATT--CTGAGCTGGAAATGCAGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63101325 242 - 75711847 TATGCGTCAA----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------GGATTCAATCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGATAGCCATTTTAAGAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAGTAATT-CCTGAGCTGGAAATGCAGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13660601 242 - 18804593 TATGCGTCAA----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------GGATTCAATCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGATAACCATTTTAAGAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAGTAATT-CCTGAGCTGGAAATGCAGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13272486 242 + 18905526 TATGCGTCAC----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------GGATTCAATCAAACTCAAAATGCAAGACGAAAGTCATCTCTCT--TCAATAACCATTTTAAGAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAGTAATT-CCTGAGCTGGAAATGCAGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101047 242 - 72318688 TATGCATCAC----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------GGATTCAATCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGGTAACCATTTTAAAAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCATAAAA---TCTTAATAATT-CCTGAGCTGGAAATGCAGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 437836 242 - 1517660 TATGCGTCAC----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------GGATTCAATCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGATAACCATTTTAAGAAT----AATACATGGAAAAGAAG-TGAACAGAACCA--TGTTTTCC-AAAGTCC--CGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAGTAATT-CCTGAGCTGGAAATGCAGACTGCTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3533749 242 + 6513552 TATGCGTCAC----------------------TGTGGGCCAAAGC---TTTTTGTCATG---------------------------------AGATTCAATCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGGTAACCATTTTAAAAAT----AATACATGGAAAAGAAG-TGTACAGAACCA--TGTTTTCC-AAAGTCC--TGATGCTAAAAA---------------------------------------------------TCACAAAA---TCTTAATAATT-CCTGAGCTGGAAATGTAGACTGGTTGGCCTGGGATCAAGTCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTACATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105304768 250 + 117903854 TGTGCGTCAC----------------------TATGTGCCAGAGC---TTTTTGTCATG---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGGCATCTCTCT--TTGGTAACCATTTTAAAAAT----AGTACATAGAAAAGAGG-TAAACAGAACCA--TGTTTTCCAAAAGTCC--TGATGATAAAAAAAA------------------------------------------------TCACAATAGCCTCTTAATAATTCCCTGAGCTGAAAATGCAGACTTCTTGGTCTGGGATCAAGTCTAGAATTT-----------TATGTTCTT-----------------------------AGCAGGCGCATC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19491280 298 - 31320352 TGTGTGTCAC----------------------TATGGGCCAGAGC---CTTTTGTCATG---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGGTAACCATTTTAAAAAT----AATACATAGAAAAGAAG-TAAACAGAGCCA--TGTTTTCCAAAAGTCC--TGATGATAaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaaaaaacaCACACACACAAAAGGCTCTTAATAATTCCCTGAGCTGAAAATGCAGACTTCTTGGTCTGGGATCAAGTCTAGAATTT-----------TATGTTCTT-----------------------------GGCAGGCGCATC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1687090 248 + 2203405 TGTGCGTCAC----------------------TATGAGCCAGAGC---TTTTTGTCATG---------------------------------GGATTCAGTCAAACTCAAAATGCAAGATGAAAGTCATCTCTCT--TTGGTAACCATTTCAAAAAT----AATATATAGAAAAGAGG-TAAATAGAACCA--TGTTTTCCAAAAGTCC--TGATGATAAAAAC--------------------------------------------------TCACAAAAGACTCTTAATAATTCCCTGAGCTGAAAATGCAGGCTTCTTGGTCTGGGATCAAGTCTAGAATTT-----------TATGTTCTT-----------------------------AGCAAGCTCATC i cebCap1.NW_016107689v1 I 71 C 0 s aotNan1.NW_018502140v1 3639629 248 - 14941987 TGTGTGTCAC----------------------TATGGGCCAGAGC---TTTTTGTCATG---------------------------------GGATTTAGTCAAACTCAAAATGCAAGACAAAAGTCATCTCTCT--TTGGTAACCATTTTAAAAAT----AATACATAGAAAAGAGG-TAAACGGAACCA--TGTTCTCCAAAAGTCC--TGATGATAAAAAA--------------------------------------------------TCACAAAAGGCTCTTAATAATTCCCTGAGCTGAAAATGCAGACTTCTTGGTCTGGGATCAAGTCTAGAATTT-----------TATGTTCTT-----------------------------AGCAGGCTCATC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41554691 249 + 83067054 TACGCCTTAT----------------------CATGGGCTAGAGC---TTTTTATTACG---------------------------------GGATTCAGTCAAACCCAAAATGCAAGATGAAAATTATCTCTCTTGTTGGTAACAATTTTAAATAT----AATAAGTAGAAAAGAGA-TGGACAGAACCA--TGTTTGCCAAAAGTCC--TGATGATAAGAG---------------------------------------------------TGACCAAAGGCTCTTAATAATTCCTTGAGCAGGAAATGCAGACAGCTTGTACTGGGATTGAATCTAGAATTT-----------GATGTTCTT-----------------------------AGCAGGTGTGTC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295048 248 - 1406956 TATGCCTCAT----------------------CATGGGCTAGAGC---TTTTTATCATG---------------------------------GGATTCAGTCAAACCCAAAATGCAAGATGAAAATTATTTCTCTTGTTGGTACCCATTTTAAATAT----AATAAGTAGAAAAGAGA-TTGGCAGAGCCA--TGTTTTCCAAAAGTCC--TGATGGTAAGAT---------------------------------------------------TCACCAAAGACTCTTAATAATTCCTTGAGCAGGAAATGCAGACTGCTTGTTCTGGAATTGAATCTAGAATTT-----------GATGTT-TT-----------------------------AGCAGATATTTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11267289 243 - 20685099 CATTCCTCAT----------------------CTTGGCCCGGAGC---TTTTTATCATG---------------------------------GGATTCATTCACACCCAAAATA-AAGACAAAAATCATTTC-----TTGGTAACCATTTTATATAT----AATAAGTAGAAAAGATA-TGGACCAAATTT--TGCTTTCCAAAAGTCC--TAATGATAAGAA---------------------------------------------------TCCCCTAAGGCTCTTCATGATTCTCTGAGTAGGAAATGTAGACTACTTGGTTTGAGATCAAATCTAGAATTT-----------GATGTTCTT-----------------------------AGCAAGTACGGC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111873791 305 + 195471971 aatacctaataaaaaatggaaaaggaaaAAAAAAAAGGACAGAGCACTTTATTGGCATGAATCCAATGCACATGGTAGACATTTTCATTGATGAATCCAGTCAAATCTGCAATGCAAACTCAAA---ACTCATCT--CTTGTGCCTGTTTTAATCATAACGAATACAAAAAGAAATAG-TGTATTCAATCA--CATTTTAC-AAAACCCTTTAATGATGAGAA---------------------------------------------------TTATCAAAGACACCTAATAATTTTCT--GTTTCAAATATTATTTCTAGAATCTGGCCTGAGTTCTAGAATGT-----------TTTGCTCCT-----------------------------ACAGGATGCTGC i mm10.chr1 I 76 C 0 s canFam3.chr1 112343535 287 - 122678785 CATGCCTCAC----------------------CCTGGGCCAGAGC---TTTTTATCAGA---------------------------------GGATTCAGGCAAACCCAAAA-GCAAGATGAAAATCATCTTTCTTGTTAGTGATCATTTTAAACAT----AAAAAATAAAAAAAAAGATGGACAAAAGTG-TTGTTCTCC-TATGTCC-TTGGTGATAAGAG---------------------------------------------------CCACCAAG-GCATTTGGTAATTCCCTGTGCTGGAAATGCAGATT-CAGGAACTGAGATGAAATC-AGATTTTttttttttaaagatgttatttatttattcatgagagacacagagaaagaggcagagacata i canFam3.chr1 C 0 I 191 s dasNov3.JH575754 523059 228 - 2150887 ---------------------------------------------TAGGTCTCATTATG---------------------------------GG--CCAGGCAATCTCCAAATGCAAAATGGAGACCATCTTTCTCATTGGTAAGCATTTTAAACAT----AGTAAGTAGAAAA-AGA-TGGTCAGAACCACTTTTTTCCC-AAAGTCC-TTGAGGATGAGAA---------------------------------------------------TCACAAAGGGCATTTAATAATCTCCAGTTTTGGAAATGCAGATTCAGGGGTCTGGAATGGAATCTGGAATTT-----------AGTGTTCTT-----------------------------CATAGGTACACC i dasNov3.JH575754 C 0 C 0 a score=1680842.000000 s hg38.chr18_GL383571v1_alt 171621 126 + 198278 AAGTGGTTAGTATCAGCAGAGAAGCTAAGGAAATACTGAAGTCGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCTTTACTCTGAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCCA-GGCA s panTro5.chr18 65081595 126 + 78221452 AAGTGGTTAGTATCAGCAGAGAAGCTAAGGAAATACTGAAGTCGAAGGATAAAGGATGGTTCCCTCACTGTAATGGCTTTACTCTGAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64200595 126 + 77229886 AAGTGGTTAGTATCAGCAGAGAAGCTAAGGAAATACTGAAGTCGAAGGATAAAGGATGGTTCCCTCACTGTAATGGCTTTACTCTGAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420071 126 + 17472758 AAGTGGTTAGTATCAGCAGAGAAGCTAAGGAAATACTGAAGTCGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCTTTACTCTGAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139460590 126 - 152096393 AAGTGGTTAGTATCAGCAGAGAAGCTTAGGAAATACTGAAGTCAAAGGATAAAGGATGATTCCCTCCCTGTAATGGCTTTACTCTGAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410255 126 + 70235451 GAGTAGTTAATATCAGCAGAGAAGCTTAGGAAATACTGAAGTTGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTAAGTTACCTACTGTGTGTTGTCCTGGGCTTACCTCTG-GTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63101567 126 - 75711847 GAGTAGTTAATATCAGCAGAGAAGCTTAGGAAATACTGAAGTTGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTAAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13660843 126 - 18804593 GAGTAGTTAATATCAGCAGAGAAGCTTAGGAAATACTGAAGTTGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTAAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13272728 126 + 18905526 GAGTGGTTAATATCAGCAGAGAAGCTTAGGAAATACTGAAGTTGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTAAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101289 126 - 72318688 GAGTGGTTAATATCAGCAGAGAAGCTTAGGAAATACTGAAGTTGAAGGATAAAGGATGATTCCCTCCCTGTAATGCCATTACTCTGAGTTACCTACTCTGTGTTGTCCTGGGCTTACTTCTG-GTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438078 126 - 1517660 GAGTGGTTAATATCAGCAGAGAAGCTTAGGAAATACTGAAGTTGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTAAGTTACCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3533991 126 + 6513552 GAGTGGTTGATATCAGCAGAGAAGCTTAGGAAATACTGTAGTCGAAGGATAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTGAGTTATCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105305018 125 + 117903854 AAGTGGTTAGCATCAGCAGAG-AATTCAGGAAGTACTGAAGTAGAAGGGTAAAGGATGATTCCCTCCCTGTAATGGCATTACTCTGAGTTACCTACTGTGTGTTGTCCTAGGCTTACTTCTG-GTCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19491578 126 - 31320352 AAGTTGTTAGCATCATCAGAGAAATTTAGGAAGTACTGAAGTAGAAGGGTAAAAGATGATTCCCTCCCTGTAATGGCATTGCTCTGAGTTACCTGCTGTGTGTTGTCTTGGGCTTACTTCTG-GTCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1687338 126 + 2203405 AAGTGGTTAGCATCAGCAGAGAAATTTAGGAAGTACTGAAGTAGAGGGGTAAAGGATGATTCCCTCCTTATAATGGCATTACTCTGAGTTATCTACTGTGTGTTGTCCTGGGCTTACTTCTG-GTCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3639877 126 - 14941987 AAGTGGTTAGCATCAGCAGAGAAATTTAGGAAGTACTGAAGTAGAAGGGTAAAGGTTGATTCCCTCCCTGTAATGGCATTACTCTGAGTTACCTACTGTGTGTTGTCCTAGACTTACTTCTG-GTCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41554940 127 + 83067054 AAGTGGTTATTATCACCTAAGAAGTTTAGGCAATACTAAAGTAGAAGAATAAAAAATGACTCTTTCTCTATAATGGTATTACTCCCTGTTACCTATTATGTGTCATACTGGGCTTACTTCTATGTCA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295296 127 - 1406956 AAGTGGTTATTATCACCTGAGAAGTTTAGGAAATACTAAAGTGGAAGAATAAAGAATGACTCTTTCCCCATAATGGTAGTACTCCCAGTTACCTACAATGTGTCACGTTAGGCTTACTTTTGTGTCA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11267532 100 - 20685099 AAGTGGTTTTTATCACCTGAGAAGTTTAGGAAATACTAAAGTAAAAGAATAAAGAATTACTCTTTCCCTGTAATGGTATTACTCCCAACTACC---------------------------TGGGTCA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111874096 126 + 195471971 AAATGGTAATTATCAGCAGAGAAGCATAGCAAGTACTGAGGGAGGAGAACACATCCTCTTCCTCTTACTGTTAAGGCCGCACTTCCAGTTACTTGTCATCCGTCAGTTTGGG-GTGTTGCTGTGTCC i mm10.chr1 C 0 C 0 s dasNov3.JH575754 523287 112 - 2150887 AAGGGATTGATATCACCAGAGAAGTTTAGGAAATGCTGGAGTAGAAGGGCA----TTTATTCTCTCTCTGTTATGGTACTGCTCCCAAACATTGATTGG---------TAGGTTTATTTTTG-TTG- i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112343822 191 - 122678785 I a score=4218694.000000 s hg38.chr18_GL383571v1_alt 171747 312 + 198278 ATTCTC-ATAGGTTTATGGTTACATGC-Tggattttgggatgagatgatcctgagtttgaatccaagctttgagattata---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatataggtgtcctcctctgt-aaaatggatttacaatattactaactgtatagagtagttgagaagctta-------aatgagaagaggcaggtacgtttctcattacagagcttTAAGGGTTG---------------ttgcactttaaaag-caattttacatactttatttcatttagcctttttaacaatcatgtgaatgatacgtga s panTro5.chr18 65081721 312 + 78221452 ATTCTC-ATAGGTTTATGGTTACATGC-Tggattttggggtgagatgatcctgagtttgaatccaagctttgagattata---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatataggtgtcctcctctgt-aaaatggatttacaatataactaactgtatagagtagttgagaagctta-------aatgagaagaggcaggtacgtttctcattacagagcttTAAGGGTTG---------------ttgcactttaaaag-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgacacgtga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64200721 312 + 77229886 ATTCTC-ATAGGTTTATGGTTACATGC-Tggattttgtggtgagatgatcctgagtttgaatccaagctttgagattata---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatataggtgtcctcctctgt-aaaatggatttacaatataactaactgtatagagtagttgagaagctta-------aatgagaagaggcaggtacgtttctcattacagagcttTAAGGGTTG---------------ttgcactttaaaag-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgacacgtga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420197 312 + 17472758 ATTCTC-ATAGGTTTATGGTTACATGC-Tggattttggggtgagatgatcctgagtttgaatccaagctttgagattata---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatataggtgtcctcctctgt-aaaatggatttacaatataactaactgtatagagtagttgagaagctta-------aatgagaagaggcaggtacgtttctcattacagagcttTAAGGGTTG---------------ttgcactttaaaag-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgacacgtga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139460716 321 - 152096393 ATTCTC-ATAGGTTTATGGTTACATGC-Tggattttggggtgagatgatcctgagtttgaatccaagctctgagattgtaatccaagctctgtaagtttctgggaggtattggaccagttactt-acgttttttgaatataggtgtcctcctctgt-aaaatggatttacaatataactaactgtatagagtagttgagaagctta-------aatgagaagaggcaggtacgtttctcagtacagagcttTAAGGGTTG---------------ttacactttaaaag-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgctatgtga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410381 312 + 70235451 ATTCTC-ATAGGTTTATGGTTACAGGC-Tggattttggggtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttcttggaggtattgggccagttactt-accttttctgaatatagatgccctcctctgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaacaggcaggtacgtttctcagtacagagcttTAAGGATTG---------------ttacactttaaaaa-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgatatgtga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63101693 312 - 75711847 ATTCTC-ATAGGTTTATGGTTACAGGC-Tggattttggggtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatatagatgccctcctctgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaacaggcaggtacgtttctcagtacagagcttTAAGGATTG---------------ttacactttaaaaa-caattttacatactttatttcatttagtctttttagcaatcatgtgaatgatatgtga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13660969 312 - 18804593 ATTCTC-ATAGGTTTATGGTTACAGGC-Tggattttggggtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttgtgggaggtattgggccagttactt-accttttctgaatatagatgccctcctctgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaacaggcaggtacgtttctcagtacagagcttTAAGGATTG---------------ttacactttaaaaa-caattttacatactttatttcatttagtctttttagcaatcatgtgaatgatatgtga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13272854 312 + 18905526 ATTCTC-ATAGGTTTATGGTTACACGC-Tggattttggggtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatatagatgccctcctctgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaacaggcaggtacgtttctcagtacagagcttTAAGGATTG---------------ttacactttaaaaa-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgatatgtga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101415 313 - 72318688 GTTCTC-ATAggtttatggttacacgc-tggattttggggtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttctgggaggtattgggccagtcactt-accttttctgaatatagatgccctcctctgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaagaggcaggtacgtttctcagtacagagcttTAAGGGTTG---------------ttacactttaaaaaccaattttacatactttatttcatttagtctttttaacaatcatgtgaatgatatgtga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438204 312 - 1517660 ATTCTC-ATAGGTTTATGGTTACACGC-Tggattttggggtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttctgggaggtattgggccggttactt-accttttctgaatagagatgccctcctgtgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaacaggcaggtacgtttctcagtacagagcttTAAGGATTG---------------ttacactttaaaaa-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgatatgtga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534117 312 + 6513552 ATTCTC-ATAGGTTTATGGTTACAcac-tggattttggagtgagatgatcctgaggttggatccaagctctgagattatg---------ttgtaagtttctgggaggtattgggccagttactt-accttttctgaatatagatgccctcctctgt-aaaatggatttacaatataactaactgtatagggtagttgagaagctta-------aatgagaagaggcaggtatgtttctcagtacagagcttTAAGGGTTG---------------ttacactttaaaaa-caattttacatactttatttcatttagtctttttaacaatcatgtgaatgatatgtga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105305143 304 + 117903854 GCTCTt-ataggtttatagttacatgc-ctgattttgaaatgagacggtcatgaatttgaatacaagttctgagattata---------ttgtaagtttcctggaggtattaggccagttactt-aacttttctgaatataggtgtcc----ctgt-aaaatagatttacaatattactaactgtatagggtatttgagaagatca-------aatgagaagaggcaggtacatttcttagtacagagcttTAAGGGTTG---------------ttatactttaaaag-caattttacatactttatttcatgtagtcttttaaataatcatgtgaA----ACTTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19491704 304 - 31320352 ACTCTT-ACAGGTTTATAGTTACATGC-Tggattttggaatgagatggtcctgagtttgaatacaagttctgagattata---------ttgtaagtttccttgagctattaggccagttactt-aacttttctgaatatagatgtcc----ctgt-aaaatggatttaaaatattactaactgtgtagagtatttgagaagatca-------aatgagaagaggcaggtacatttcttagtatagATCTTTAAGGGTTG---------------TTATGCTGTAAAAG-CAATTTTACGTACTTTATTTCATGTAGTCTTTTTAATAATCATATGAA----ACGTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1687464 296 + 2203405 ---------AGGTTTATAGTTACATGC-TGTATtttggaatgagatggtcctgagtttgaatacaagttctgagattata---------ttgtaagtttcctggaagtattaggccagttactt-aacttttctgaatatacatgtcc----ctat-aaaatggatttacaatattactaactgtatagggtgtttgagaagatca-------aatgagaagaggcaggtacatttcttagtacggagctttaagggttg---------------gcatactgtaaaag-caattttacatactttatttcatgtagtctttttaataatcatgtgaa----acgtta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3640003 304 - 14941987 ACTCTT-ACAGGTTTATAGTTACATGC-Tggattttggaatgagatggtcctgagtttgaacaccagttctgagattata---------ttgtaagtttcctggaggtattaggccagttactt-aacttttctgaatataggtgtcc----ctgt-aaaatggatttacaatattactaactgtatagggtatttgagaagatca-------gatgagaagaggcaggtacatttcttagtacagagcttTAAGGGTTG---------------ttatactttaaaag-ccattttacatactttatttcatgtagtctttttaataatcatgtgaa----acatta i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41555067 319 + 83067054 ACTCTTAACAGGTGTATGGTTACATGa-tggattttggagtgacatggtcctgagtttgaattcaaaccctgacaccata---------ttgtaagttactgtgaggcattgagccagttcctt-aacttttcttattatcagtgttgtcatctgt-aaaataagggtacaatattgctcactgcatagggcagttgagaagttca-------aatgagaagtggcaggtaaatttctcagtacagagcttTGGGGATTATTCAAGGAGAGCTCCTTGTAGTTGAAAAG-CAATTTTACATTCTTTGTTTCATTTAATCATTTTAAT---------AATGATATATGA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295423 328 - 1406956 ACTCTT-ACAGGTGTATGGTTACGTGa-tagattttggagtgagatggtcctgagtttgaattcaagccctgacatcata---------ttgtaagttactgtgagacattgagccagttccttaaacttttcttaacaccagtgtcctcatctgt-aaaataaggctaaaatattactaactgcatagggcacttgagaagttca-------aatgacaagcagcaggtaaacttctcagcacagagcttTGAGGATTGCTCAAAGAGAGCTCCTTGTAGTTGAAaag-caattttacattctttgtttcatttaatcattttcataatcatgtgaatgatatatga i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11267632 300 - 20685099 GCTCTT---------ATGGTTACATGa-tggatttcagagtgagatggtcctgagtttgaattcaagcccggacactgta---------tcataaattactatgcgttattatgcaagttactt-aacttttctgaatatcagtgtcctctcctgt-aaaataaggccaaa----tactc-ctgtgtaaggcagttgagacgttcg-------gatgagaagcggcaagtacatttctcagcactaagc-ttggGGATTGCTCAAGGAGAACTCTTTGTAGTTGACAAG-TAATTTTGCATTGTTTGTTTTA-TTAATCACGTG------------ATGGATACATGG i otoGar3.GL873546 C 0 I 415 s mm10.chr1 111874222 266 + 195471971 ACTC---ATAGAAAGATGGTTGTACAC-TGGATTT--GAATAA---AGTCTTGAATTTAAATGAAAATTATGAAACT-TG---------ACGTATGTCACTTTAAAA-GTTGTACCAGTTATAT-ACCATGTCTGTCTAGAGAAGTCCAC--TTAT-GAAACGA-------------------------------TGAGGAGCTAATCTCTCTAATGTACATAAGAAAGTTTATTTCT------ATAGTTTGAACGCT-----------------CCATAGATGAACAG-CTA-TGTATATATTTTGTCTCATTTA-TCCTTTTAATAAT-GGGTAAAGGATATATGA i mm10.chr1 C 0 C 0 s canFam3.chr1 112344013 320 - 122678785 ATTCTC-------TTCCTGTaatagcc-tagacttttgagtgaggtagtcctgggtttgagtcct-gctctgaggctata---------ttgtaaattgttgtgaggaattgggctagttatat-gacttttctgaatacagatgtcctcatctgtaaaaatgggtttggaaaatcactaatgtcaaaggacagttgtgacaggta-------agtgagaagaggcaggca-gtccctcagtgcagagcttagGGGATTACTCAAGGAAagctctctagggttaagaag-caactttacataatttgtctcacttaattcttttaacaatcatgcgaatgatgtatga i canFam3.chr1 I 191 C 0 s dasNov3.JH575754 523399 300 - 2150887 GCTCTT-GTAGGTTTCTATTTACATgcttagactttcaagagagacagtcctgagcctgaatccaagctctaagactaaa---------gcataattttctttgacacactgagccaattactt-aacttttctaaatataagtatcctcatctgt-aaaatggggttttgatattactaagtgcataacatacttggaaggttta-------aatgagaagaggcagg-----tCCTTAGGGGagaactttggggattt-----------------------gaaaag-caattttatatactttgtctcctttaagcctgttaacaatcatgtgaatgatatatga i dasNov3.JH575754 C 0 C 0 a score=242016.000000 s hg38.chr18_GL383571v1_alt 172059 14 + 198278 ttaactcaattttg s panTro5.chr18 65082033 14 + 78221452 ttaactcaattttg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201033 14 + 77229886 ttaactcaattttg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420509 14 + 17472758 ttaacccaattttg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461037 14 - 152096393 ttaactcaattttg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410693 14 + 70235451 ttaactcaattttg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102005 14 - 75711847 ttaactcaattttg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661281 14 - 18804593 ttaactcaattttg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273166 14 + 18905526 ttaactcaattttg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101728 14 - 72318688 ttaactcaattttg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438516 14 - 1517660 ttaactcaattttg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534429 14 + 6513552 ttaactcaattttg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105305447 14 + 117903854 TTTACTCAATTTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19492008 14 - 31320352 TTTACTCAATTTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1687760 14 + 2203405 tttgctcaattttg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3640307 14 - 14941987 tttactcaattttg i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41555386 14 + 83067054 TTAACTCAATTTTA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295751 14 - 1406956 ttaactcaatttta i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11268347 14 - 20685099 CTAACTCAATTTAG i otoGar3.GL873546 I 415 C 0 s mm10.chr1 111874488 14 + 195471971 TTAAATCAACACTC i mm10.chr1 C 0 C 0 s canFam3.chr1 112344333 14 - 122678785 ttcactcaattttG i canFam3.chr1 C 0 I 799 s dasNov3.JH575754 523699 14 - 2150887 ttaactcaatgttg i dasNov3.JH575754 C 0 C 0 a score=1107443.000000 s hg38.chr18_GL383571v1_alt 172073 76 + 198278 tgtaccata-------gaactgagaaagaggAA-TTTGGAATCGAAAATATCATAACTTAAGATAGTGTGACAAAAATAGTATT s panTro5.chr18 65082047 76 + 78221452 tgtaccata-------gaactgagaaagaggAA-TTTGGAATCGAAAATATCATAACTTAAGATAGTGTGACAAAAATAGTATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201047 76 + 77229886 tgtactata-------gaactgagaaagaggAA-TTTGGAATCGAAAATATCATAACTTAAGATAGTGTGACAAAAATAGTATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420523 76 + 17472758 tgtaccata-------gaactgagaaagaggAA-TTTGGAATCGAAAATATCATAACTTAAGATAGTGTGACAAAAATAGTATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461051 76 - 152096393 tgtaccata-------gaactgagaaagaggAA-TTTGGAATAGAAAATATCATAACTTAAGATAGTGTGACAAAAATAGTATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410707 76 + 70235451 tgtaccaaa-------gaactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102019 76 - 75711847 tgtaccaaa-------gaactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661295 76 - 18804593 tgtaccaaa-------gaactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273180 76 + 18905526 tgtaccaaa-------gaactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101742 76 - 72318688 tgtaccgaa-------gaactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438530 76 - 1517660 tgtaccaaa-------gaactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534443 76 + 6513552 tgtaccaaa-------taactgagaaagagaaa-ttTGGAATAGAAAATACCATAACTTAAGACAGTGTGACAAAAATAGTATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105305461 76 + 117903854 TGTACTAAA-------GAACTGAGAAAGAGAAA-TGAGGAATAGAAAATATTGTAACTTAGGATAGTGTGACAAAAATAGTATA i calJac3.chr13 C 0 I 1189 s saiBol1.JH378121 19492022 76 - 31320352 TGTGCTAAA-------GAACTGAGAAAGAGAAA-TTAGGAATAGAAAATATTATAATTTAGGATAGTGTGACAAAAATAGTATA i saiBol1.JH378121 C 0 I 1188 s cebCap1.NW_016107689v1 1687774 76 + 2203405 tgtactaaa-------gaactgagaaagagaaa-ttaggAATAGAAAATATTATAACTTAGGATAGTGCGACAAAAATGGTATG i cebCap1.NW_016107689v1 C 0 I 1196 s aotNan1.NW_018502140v1 3640321 76 - 14941987 tatactaaa-------gaactgagaaagagaaa-ttaggAATAGAAAATATTATAACTTAGGATAGTGTGACAAAAATAGTATA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41555400 76 + 83067054 TATACTGAA-------AAAATGAGGAAGAGAAA-TTTAGGATAGGAAATATCATATGTTAGGATAGTGTGACAAAAATAGGACA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295765 76 - 1406956 tatactgaa-------aaaatgtggaagagaaa-tttagCATAGGAAATATTGCATGTTAGGATAGCGTGACAAAAATAGGACA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11268361 80 - 20685099 TATACTGAAATTTCCTATACTGAGGAAGAGGCATTTTAGGATAGAAAATAT----GGTTAGAATAGCATGACAAAAATAGTACA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111874502 63 + 195471971 TATGCTGAA-------ATATCAATTAAGAAAAA-C------TAGGAAATGTCACATTTT-TGATAGTATGACAAATGT------ i mm10.chr1 C 0 C 0 s canFam3.chr1 112345146 76 - 122678785 tgTATTAAA-------AAACTGAGGAAGAAAAA-TTCAGGATATAAAATATCATCCTTTAGGATAATGTGACCAAAATAGTACA i canFam3.chr1 I 799 C 0 s dasNov3.JH575754 523713 77 - 2150887 gatattaaaa------gaactgaggaagagaaa-ttcagGATAGAAATTATCATATCTTAGGAGAGCATGACAAAAATAGTACA i dasNov3.JH575754 C 0 C 0 a score=89301.000000 s hg38.chr18_GL383571v1_alt 172149 6 + 198278 CCAGTG s panTro5.chr18 65082123 6 + 78221452 CCAGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201123 6 + 77229886 CCAGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420599 6 + 17472758 CCAGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461127 6 - 152096393 CCAGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410783 6 + 70235451 CCAATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102095 6 - 75711847 CCAATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661371 6 - 18804593 CCAATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273256 6 + 18905526 CCAATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101818 6 - 72318688 CCAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438606 6 - 1517660 CCAATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534519 6 + 6513552 CCAGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306726 6 + 117903854 CCAGTG i calJac3.chr13 I 1189 C 0 s saiBol1.JH378121 19493286 6 - 31320352 CCAGTG i saiBol1.JH378121 I 1188 C 0 s cebCap1.NW_016107689v1 1689046 6 + 2203405 CCAGTG i cebCap1.NW_016107689v1 I 1196 C 0 s aotNan1.NW_018502140v1 3640397 6 - 14941987 CCAGTG i aotNan1.NW_018502140v1 C 0 I 1226 s micMur3.chr19 41555476 6 + 83067054 CTGGTG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295841 6 - 1406956 CTGGTG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11268441 6 - 20685099 CCGGTG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111874565 2 + 195471971 ----TG i mm10.chr1 C 0 C 0 s canFam3.chr1 112345222 6 - 122678785 CTGATA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 523790 6 - 2150887 CTGGTG i dasNov3.JH575754 C 0 C 0 a score=1019971.000000 s hg38.chr18_GL383571v1_alt 172155 62 + 198278 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACCGAGAATATTTGAAGGAAACAT s panTro5.chr18 65082129 62 + 78221452 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201129 62 + 77229886 TCTACCAACTTGTTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420605 62 + 17472758 TCTACCAACTTGCTTTCTGAACTTGTCTAATGTTAAAGACTGAGAATATTTGAAGGAAACAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461133 62 - 152096393 TCTACCAACTTCCTTTCTGAACTTGTCTAATTTTAAAGACTAAGAATATTTGAaggaaacat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410789 62 + 70235451 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102101 62 - 75711847 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661377 62 - 18804593 TCTACCAACTTGCTTTGTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273262 62 + 18905526 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101824 62 - 72318688 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438612 62 - 1517660 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGACTATTTGAAGGAAACAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534525 62 + 6513552 TCTATCAATTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATATTTGAAGGAAACAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306732 60 + 117903854 TCTACCAGCTTGCTTTCTGAGCTTGTCTAACTTTAAAGACTGAGAAGAGTTGAAGGAAAC-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493292 62 - 31320352 TCTACCAACTTGCTTTCTGAACTTATCTAATTTTAAAGACTGAGTCTGGTCAAAGGAAACAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689052 62 + 2203405 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATAGTTGAaggaaacac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3641629 62 - 14941987 TCTACCAACTTGCTTTCTGAACTTGTCTAATTTTAAAGACTGAGAATAGTTGAaggaaacat i aotNan1.NW_018502140v1 I 1226 C 0 s micMur3.chr19 41555482 62 + 83067054 TCTACCGACTTGCTTTCTGAATTGGTCTAATTTTAAAGACTGTGAATATTTAAaggaaacat i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1295847 61 - 1406956 TCTACCGACTTGCTTTCTGAATTGGTCTAATTTTAAAGACTGTGAATATTTGAAGg-aacat i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11268447 61 - 20685099 TCTACTGACTTGCTTTCCAAAATTGTCTAA-TTTAAAAACTGTTAATATTTGAAGGAAACAT i otoGar3.GL873546 C 0 I 290 s mm10.chr1 111874567 61 + 195471971 TCTATTGACTATCTTTGTAAATTCATA-AATTCTACAAATGAGGATTGTGCTAAAGAAAGAT i mm10.chr1 C 0 C 0 s canFam3.chr1 112345228 62 - 122678785 TCTAGCCACTTGCTTTCCCAATTTATTTaattttaaagattaagagtattttaaggacatag i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 523796 62 - 2150887 TCTAGCAACTTGCTTTCTGAAATTGTCTaattttaaagactgggaatatgttaagaaaacat i dasNov3.JH575754 C 0 C 0 a score=602580.000000 s hg38.chr18_GL383571v1_alt 172217 42 + 198278 GCAGCGCAGTTCCTTCATTGTACTGGTGAAGAATCTGAGCTC s panTro5.chr18 65082191 42 + 78221452 GCAGTGCAGTTCCTTCATTGTACTGGTGAAGAATCTGAGCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201191 42 + 77229886 GCAGTGCAGTTCCTTCATTATACTGGTGAAGAATCTGAGCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420667 42 + 17472758 GCAGTGCAGTTCCTTCATTGTACTGGTGAAGAATCTGAGCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461195 42 - 152096393 gtagtgcagttccttcattttactggtgaagaatctgagCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410851 42 + 70235451 GTAGTGCAGTTTCTTCACTTTACTGGTGAAGAATCTGAGCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102163 42 - 75711847 GTAGTGCAGTTCCTTCACTTTACTGGTGAAGAATCTGAGCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661439 42 - 18804593 GTAGTGCAGTTCCTTCACTTTACTGGTGAAGAATCTGAGCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273324 42 + 18905526 GTAGTGCAGTTCCTTCACTTTACTGGTGAAGAATCTGAGCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101886 42 - 72318688 GTAGTGCAGTTCCTTCACTTTACTGGTGAAGAATCTGAGCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438674 42 - 1517660 GTAGTGCAGTTCCTTCACTTTACTGGTGAAGAATCTGAGCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534587 42 + 6513552 GTAGTGCAGTTCCTTCACTTTACTGGTGAGGAATCTGAGTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306792 42 + 117903854 GTAATGCATTTCTCTCATTTTACTGGTGAAGAATCTGAGCTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493354 42 - 31320352 GTTGTGCAGTTCTCTCATTCTACTGGTGAAGAGTCTGAGCTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689114 42 + 2203405 ttagtgccattctctcattttactgatgaagaatctgagCTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3641691 42 - 14941987 gtagtgcagttctctcattttactggtgaagaatctgagCTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41555544 42 + 83067054 ttaatgcagttcgctcattttactggtgaggaatctgagctc i micMur3.chr19 C 0 I 327 s proCoq1.NW_012148742v1 1295908 42 - 1406956 ttaatgcagttcgctcattttactggttaagaatctgagctc i proCoq1.NW_012148742v1 C 0 I 298 s mm10.chr1 111874628 42 + 195471971 CTACACCTTTTCCTTCATGTTATCCATGACAGGGCTCAGGTC i mm10.chr1 C 0 I 3978 s canFam3.chr1 112345290 42 - 122678785 ctaatccatttccctcattttacaggtaaagaatctgaggcc i canFam3.chr1 C 0 I 23 s dasNov3.JH575754 523858 42 - 2150887 tcagtgtagttgtctcattttactgctgagaaatctgaggtc i dasNov3.JH575754 C 0 I 14 e otoGar3.GL873546 11268508 290 - 20685099 I a score=391804.000000 s hg38.chr18_GL383571v1_alt 172259 42 + 198278 ---------GATGTGTGAGAGAGAAAGAAGGCCTGCTGGACCAGAACACAG s panTro5.chr18 65082233 42 + 78221452 ---------GATGTGTGAGAGAGAAAGAAGGCCTGCTGGACCAGAACACGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201233 42 + 77229886 ---------GATGTGTGAGAGAGAAAGAAGGCCTGCTGGACCAGAACACGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420709 42 + 17472758 ---------GATGTTTGAGAGAGAAAGAAGGCCTGCTGGACCAGAACACAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461237 42 - 152096393 ---------GATGTGTGAGAGAGAAAGAAGGCCTGCTGGACCAGAACACAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410893 42 + 70235451 ---------GATGTGTGAGAGCGACAAAAGGCCTGCTGGACCAGAACACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102205 42 - 75711847 ---------GATGTGTGAGAGCGACAAAAGGCCTGCTGGACCAGAACACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661481 42 - 18804593 ---------GATGTGTGAGAGCGACAAAAGGCCTGCTGGACCAGAACACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273366 42 + 18905526 ---------GATGTGTGAGAGCAACAAAAGGCCTGCTGGACCAGAACACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101928 42 - 72318688 ---------AATGTGTGAGAGCGACAAAAGGCCTGCTGGACCAGAATACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438716 42 - 1517660 ---------GATGTGTGAGAGCGACAAAAGGCCTGCTGGACCAGAACACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534629 31 + 6513552 ---------GATGTGTGAGAGCGACAAAAGGCCTGCTGGA----------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306834 42 + 117903854 ---------GATGTGTGAGACAGACAGAAGGACTGCTGGACCAGAACACAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493396 42 - 31320352 ---------GGTGTGCGAGGCAGACAGAGGCACTGCTGGACCGGAACACAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689156 39 + 2203405 ---------GATGTGTGAGACAGACA---GGACTGCTGGACCAGAACACAG i cebCap1.NW_016107689v1 C 0 I 31 s aotNan1.NW_018502140v1 3641733 42 - 14941987 ---------GATGTGTGAGACAGACAGAAGGACTGCTGGACCAGAACACAG i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112345355 34 - 122678785 ---------aatgtgagagaaagacaga--------ctcacaaagactcag i canFam3.chr1 I 23 C 0 s dasNov3.JH575754 523914 47 - 2150887 gattttttcactgtgagagagaaacaaaaac----ctggatcagaacccag i dasNov3.JH575754 I 14 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e otoGar3.GL873546 11268508 290 - 20685099 I a score=304927.000000 s hg38.chr18_GL383571v1_alt 172301 45 + 198278 GTTTCTTTACTACCTATCTGCAGCTGTGCCGCTACATTGTAGATG s panTro5.chr18 65082275 45 + 78221452 GTTTCTTTACTACCTATCTGCAGCCGTGCCGCTACATTGTAGATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201275 45 + 77229886 GTTTCTTTACTACCTATCTGCAGCCGTGCCGCTACATTGTAGATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420751 45 + 17472758 GTTTCTTTACTACCTATCTGCAGCCGTGCCGCTACATTGTAGATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461279 45 - 152096393 GTTTCTTTACTACCCATCTGCAGCCATGCCACTACATTGTAGATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410935 45 + 70235451 GTTTCTTTACTACCCATCTGCGGCCATGCCACTACATTGTAGATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102247 45 - 75711847 GTTTCTTTACTACCCATCTGCGGCCATGCCACTACATTGTAGATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661523 45 - 18804593 GTTTCTTTACTACTCATCTGCGGCCATGCCACTACATTGTAGATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273408 45 + 18905526 GTTTCTTTACTACCCATCTGCAGCCATGCCACTACATTGTAGACG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60101970 45 - 72318688 GTTTCTTTACTACCCATCTGCAGCCATGCCACTACATTGTAGATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438758 45 - 1517660 GTTTCTTTACTACCCATCTGCAGCCATGCCACTACATTGTAGACG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534660 25 + 6513552 --------------------CAGCCATGCCACTACATTGTAGATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306876 31 + 117903854 -----ATCTCTACCCATCTGCAGCTGTACCATGACA--------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493438 31 - 31320352 -----ATCTCTACTCATCTGCAGCCGTACCATGACA--------- i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3641775 31 - 14941987 -----ATCTCTACCCATCTGCAGCCGTGCCATGACA--------- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112345389 44 - 122678785 -gttttttaatgcaaatctgtagccttgccattgcaTTGTTGAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 523961 45 - 2150887 agtttttcactgtcagtctgcagcctcATGGTGACATTGTTCACA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e otoGar3.GL873546 11268508 290 - 20685099 I e cebCap1.NW_016107689v1 1689195 31 + 2203405 I a score=361448.000000 s hg38.chr18_GL383571v1_alt 172346 28 + 198278 ATGCTATTTGTTTTTAAGCATATTCAGT s panTro5.chr18 65082320 28 + 78221452 ATGCTATTTGTTTTTAAGCATATTCAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201320 28 + 77229886 ATGCTATTTGTTTTTAAGCATATTCAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420796 28 + 17472758 ATGCTATTTGTTTTTAAGCATATTCAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461324 28 - 152096393 ATGCTATTTGTTTTTAAGCATATTCAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57410980 28 + 70235451 ATGCTATTTGTTTTTAAGCATATTCAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102292 28 - 75711847 ATGCTATTTGTTTTTAAGCATATTCAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661568 28 - 18804593 ATGCTATTTGTTTTTAAGCATATTCAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273453 28 + 18905526 ATGCTATTTGTTTTTAAGCATATTCAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102015 28 - 72318688 ATGCTATTTGTTTTTAAGCATATTCAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438803 28 - 1517660 ATGCTATTTGTTTTTAAGCATATTCAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534685 28 + 6513552 ATGCTATTTGTTTTTAAGCATATTCAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306907 28 + 117903854 ATGCTATTTGTTTTTAAGCATATTCAGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493469 28 - 31320352 ATACTATTTGTTTTTAAGCATACTCAGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689226 28 + 2203405 ATGCTATTTGTTTTTAAGCATATTCAGT i cebCap1.NW_016107689v1 I 31 I 29 s aotNan1.NW_018502140v1 3641806 28 - 14941987 ATGCTATTTGTTTTTAAGCATATTCAGT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112345433 28 - 122678785 GTGTGATTTATCTTTAAATAAATCCAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524006 28 - 2150887 AGGCTATTTATTTTTAAGCATATCCAAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e otoGar3.GL873546 11268508 290 - 20685099 I a score=134677.000000 s hg38.chr18_GL383571v1_alt 172374 17 + 198278 GATATATTAAGTTGCTT----- s panTro5.chr18 65082348 17 + 78221452 GATATATTAAGTTGCTT----- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201348 17 + 77229886 GATATATTAAGTTGCTT----- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420824 17 + 17472758 GATATATTAAGTTGCTT----- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461352 17 - 152096393 GATATATTAAGTTGCTT----- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411008 17 + 70235451 GATATATTAAGTTGTTT----- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102320 17 - 75711847 GATATATTAAGTTGTTT----- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661596 17 - 18804593 GATATATTAAGTTGTTT----- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273481 17 + 18905526 GATATATTAAGTTGTTT----- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102043 17 - 72318688 GATATATTAAGTTGTTT----- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438831 17 - 1517660 GATATATTAAGTTGTTT----- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534713 17 + 6513552 GATATATTAAGTTGCTT----- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306935 17 + 117903854 AATACATAAAGTTGCTT----- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493497 17 - 31320352 AATGCATAAAGTTGCTT----- i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3641834 17 - 14941987 AATACATAAAGTTGCTT----- i aotNan1.NW_018502140v1 C 0 I 12 s canFam3.chr1 112345461 8 - 122678785 GATACATA-------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524034 22 - 2150887 GATACGTGTTTTTGTTTTTCTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e otoGar3.GL873546 11268508 290 - 20685099 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I a score=84255.000000 s hg38.chr18_GL383571v1_alt 172391 10 + 198278 CTTTAGATCT s panTro5.chr18 65082365 10 + 78221452 CTTTAGATCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201365 10 + 77229886 CTTTAGATCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420841 10 + 17472758 CTTTAGATCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461369 10 - 152096393 CTTTAGATCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411025 10 + 70235451 CTTTAGATCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102337 10 - 75711847 CTTTAGATCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661613 10 - 18804593 CTTTAGATCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273498 10 + 18905526 CTTTAGATCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102060 10 - 72318688 CTTTAGATCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438848 10 - 1517660 CTTTAGATCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534730 10 + 6513552 CTTTAGATCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306952 10 + 117903854 TTTCTGATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493514 10 - 31320352 TTTCTGATAT i saiBol1.JH378121 C 0 C 0 s canFam3.chr1 112345469 10 - 122678785 TTTTAGATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524056 10 - 2150887 CTTCTGATAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I a score=9555.000000 s hg38.chr18_GL383571v1_alt 172401 1 + 198278 T s panTro5.chr18 65082375 1 + 78221452 T i panTro5.chr18 C 0 I 15 s panPan2.chr18 64201375 1 + 77229886 T i panPan2.chr18 C 0 I 5 s gorGor5.CYUI01014964v1 5420851 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 I 16 s nomLeu3.chr4 139461379 1 - 152096393 T i nomLeu3.chr4 C 0 I 9 s rheMac8.chr18 57411035 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102347 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661623 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273508 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102070 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438858 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534740 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306962 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493524 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s dasNov3.JH575754 524066 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e canFam3.chr1 112345479 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I a score=4772.000000 s hg38.chr18_GL383571v1_alt 172402 7 + 198278 -AAAAAAA s panTro5.chr18 65082391 7 + 78221452 -aaaaaaa i panTro5.chr18 I 15 C 0 s panPan2.chr18 64201381 7 + 77229886 -aaaaaaa i panPan2.chr18 I 5 C 0 s gorGor5.CYUI01014964v1 5420868 7 + 17472758 -aacaaaa i gorGor5.CYUI01014964v1 I 16 C 0 s nomLeu3.chr4 139461389 7 - 152096393 -aaaaaaa i nomLeu3.chr4 I 9 C 0 s calJac3.chr13 105306963 7 + 117903854 -AACAAAA i calJac3.chr13 C 0 C 0 s dasNov3.JH575754 524067 7 - 2150887 GTATATA- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e canFam3.chr1 112345479 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C e colAng1.NW_012115433v1 3534741 0 + 6513552 C e manLeu1.NW_012106698v1 438859 0 - 1517660 C e chlSab2.chr18 60102071 0 - 72318688 C e cerAty1.NW_012001075v1 13273509 0 + 18905526 C e macNem1.NW_012016688v1 13661624 0 - 18804593 C e macFas5.chr18 63102348 0 - 75711847 C e rheMac8.chr18 57411036 0 + 70235451 C a score=419322.000000 s hg38.chr18_GL383571v1_alt 172409 80 + 198278 AAAAAAACAACTCATAAAGT-gccgggcac----ggtggctcacacctgtaatcccagcactttgggaggccgagatgggtggat s panTro5.chr18 65082398 81 + 78221452 aaaaaaaaaaCTCATAAAGTggccgggcac----ggtggctcacacctgtaatcccagcactttgggaggccgagatgggtggat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201388 85 + 77229886 aaaaaaaaaaCTCATAAAGTggctgggcacggtgggtggctcacacttgtaatcccagcactttgggaggccgagatgggtggat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420875 81 + 17472758 caaaaaaaaacTCATAAAGTggccgggcgc----agtggctcacacctgtaatcccagcactttgggaggccgagatgggtggat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461396 81 - 152096393 gcaaaaaaaCCTCATACAGTggccaggtgc----ggtggctcacacctgtaatcccagcactttgggaggccgagatgggtggat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411036 80 + 70235451 -AAAAAAAACCTCATAAAGTggctgggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102348 80 - 75711847 -AAAAAAAACCTCATAAAGTggctgggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661624 80 - 18804593 -TAAAAAAACCTCATAAAGTggctgggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273509 80 + 18905526 -AAAAAAAACCTCATAAAGTggctgggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102071 80 - 72318688 -AAAAAAAACCTCATAAAGTggctgggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438859 81 - 1517660 AAAAAAAAACCTCATAAAGTggctgggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagatgggtggat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534741 80 + 6513552 -AAAAAAAACCTCATAAAGTggccaggcgt----ggtggctcacgcctgtaatcccagcactttgggaggccaagacgggcggat i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 524074 13 - 2150887 ------------------------------------------------------------------------TATATGGATGGAT i dasNov3.JH575754 C 0 I 80 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e canFam3.chr1 112345479 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C a score=261589.000000 s hg38.chr18_GL383571v1_alt 172489 48 + 198278 cacgaggtcaggagattgaga-ccattctggctaacacagtgaaacccc s panTro5.chr18 65082479 48 + 78221452 cacgaggtcaggagattgaga-ccattctggctaacacagtgaaacccc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201473 49 + 77229886 cacgaggtcaggagattgagacccattctggctaacacagtgaaacccc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5420956 48 + 17472758 cacgaggtcaggagatcgaga-ccattctggctaacacagtgaaacccc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461477 48 - 152096393 cacgaggtcaggagatcgaga-ccattgtggctaacacggtgaaaccct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411116 48 + 70235451 cacgaggtcaggagatagaga-ccatcctggctaacatggtgaaacccc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102428 48 - 75711847 cacgaggtcaggagatagaga-ccatcctggctaacatggtgaaacccc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661704 48 - 18804593 cacgaggtcaggagatagaga-ccatcctggctaacatggtgaaacccc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273589 48 + 18905526 cacgaggtcaggagatagaga-ccatcctggctgacatggtgaaacccc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102151 48 - 72318688 cacgaggtcaggagatagaga-ccatcctggctaacatggtgaaacccc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438940 48 - 1517660 cacgaggtcaggagatagaga-ccatcctggctaacatggtgaaacccc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534821 47 + 6513552 tacgaggtca-gagatagaga-tcctcctggctaacatggtgaaacccc i colAng1.NW_012115433v1 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e canFam3.chr1 112345479 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C a score=155553.000000 s hg38.chr18_GL383571v1_alt 172537 30 + 198278 gtctctactaaaaatacaaa-----aaaattagcc s panTro5.chr18 65082527 30 + 78221452 gtctctactaaaaatacaaa-----aaaattagcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201522 30 + 77229886 gtctctactaaaaatacaaa-----aaaattagcc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421004 30 + 17472758 gtctctactaaaaatacaaa-----aaaattagcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461525 30 - 152096393 gtgtctactaaaaatacaaa-----aaaattatcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411164 35 + 70235451 gtctctactaaaaatacacacacacaaaattagcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102476 35 - 75711847 gtctctactaaaaatacacacacacaaaattagcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661752 34 - 18804593 gtctctactaaaaaaacacacaca-aaaattagcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273637 35 + 18905526 gtctctactaaaaatacacacacacaaaattagct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102199 35 - 72318688 gtctctactaaaaagacacacacaaaaaattagcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 438988 35 - 1517660 gtctctactaaaaatacacacacacaaaattagct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534868 35 + 6513552 gtctctactaaaaacacacacacacaaaattagcc i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112345479 24 - 122678785 GTTTCTGCTGATAT-----------TAAATTAACT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C a score=175252.000000 s hg38.chr18_GL383571v1_alt 172567 31 + 198278 gggcgtagtggcgggcgcctgtagtcccagc s panTro5.chr18 65082557 31 + 78221452 gggcgtagtggcgggcgcctgtagtcccagc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201552 31 + 77229886 gggcgtagtggcgggcgcctgtagtcccagc i panPan2.chr18 C 0 I 28 s gorGor5.CYUI01014964v1 5421034 31 + 17472758 gggcgtagtggtgggcgcctgtagtcccagc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461555 31 - 152096393 aggcgtagtggcgggcgcctgtagtctcagc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411199 31 + 70235451 gggcatggtggcgggcgcctgtagtcccagc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102511 31 - 75711847 gggcatggtggcgggcgcctgtagtcccagc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661786 31 - 18804593 gggcatggtggcgggcgcctgtagtcccagc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273672 31 + 18905526 gggcatggtggcgggcgcctgtagtcccagc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102234 31 - 72318688 gggcatggtggcgggtgcctgtagtcccagc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439023 31 - 1517660 gggcatggtggcgggtgcctgtagtcccagc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534903 30 + 6513552 gggtgtggtggcgggcacctgtagt-ccagc i colAng1.NW_012115433v1 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e canFam3.chr1 112345503 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C a score=520328.000000 s hg38.chr18_GL383571v1_alt 172598 113 + 198278 tactcaggaggctgaggcaggagaattgcgtgaacctgggaggcagaggttgcagtgagccgagatcgcacctctgcactccagcctgggcgactaagcaagactctgtctcc s panTro5.chr18 65082588 113 + 78221452 tactcaggaggctgaggcaggagaattgcgtgaacctgggaggcagaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgactgagcaagactctgtctca i panTro5.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421065 113 + 17472758 tactcaggaggctgaggcaggagaattgcgtgaacctgggaggcagaggttgcagtgagccgagatcgcacctctgcactccagcctgggcgactgagcgagactctgtctcC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461586 113 - 152096393 tactcaggaggctgaggcaagagaattgtgtgaacctgggaggtggaggttacagtgagctgagatcgcgcctctgcactccagcctgggcgactgagcaagactctgtctcc i nomLeu3.chr4 C 0 I 7 s rheMac8.chr18 57411230 111 + 70235451 tactcgggaggctgaggcaggagaatggcatgaatccgagaggcagaggttgcagtgagccgggatcgcaccactgcactctagcctgggcgactgagggagac--tgtctcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102542 113 - 75711847 tactcgggaggctgaggcaggagaatggcatgaatccgagaggcagaggttgcagtgagccgggatcgcaccactgcactctagcctgggcgactgagggagactgtgtctcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661817 113 - 18804593 tactcgggaggctgaggcaggagaatggcatgaatccgagaggcagaggttgcagtgagctgggatcgcaccactgcactctagcctgggtgactgagggagactgtgtctcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273703 113 + 18905526 tactcgggaggctgaggcaggagaatggcatgaacccgagaggcagaggttgcagtgagccgggatcgcaccactgcactctagcctgggcgactgagggagactgtgtctcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102265 113 - 72318688 tactcgggaggctgaggcaggagaatggcatgaacccgggaggcagaggttgcagtgagccgggatcgcgccactgcactctagcctgggcgactgagggagactgtgtctcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439054 113 - 1517660 tactcgggaggctgaggcaggagaatggcatgaacccgagaggcagaggttgcagtgagccgggatcgcaccactgcactctagcctgggcgactgagggagactgtgtctcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3534933 113 + 6513552 tactcgggaggctgaggcaggagaatggcatgaacccgggaggcagaggttgcagtgagccaagattgcaccactgcactctagcctgggtgactgcgggagactctgtctcc i colAng1.NW_012115433v1 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e canFam3.chr1 112345503 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C e panPan2.chr18 64201583 28 + 77229886 I a score=33769.000000 s hg38.chr18_GL383571v1_alt 172711 8 + 198278 -aaaaaaaa s panTro5.chr18 65082701 8 + 78221452 -aaaaaaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201611 8 + 77229886 -aaaaaaaa i panPan2.chr18 I 28 C 0 s gorGor5.CYUI01014964v1 5421178 8 + 17472758 -AAaaacaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461706 8 - 152096393 -aaaaaaaa i nomLeu3.chr4 I 7 C 0 s rheMac8.chr18 57411341 9 + 70235451 aaaaaacat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102655 9 - 75711847 aaaaaacat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661930 9 - 18804593 aaaaaacat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273816 9 + 18905526 aaaaaacat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102378 9 - 72318688 aaaaaacat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439167 9 - 1517660 agaaaacat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535046 9 + 6513552 aaaaaacat i colAng1.NW_012115433v1 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e canFam3.chr1 112345503 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I e saiBol1.JH378121 19493525 0 - 31320352 C a score=5634.000000 s hg38.chr18_GL383571v1_alt 172719 1 + 198278 a s panTro5.chr18 65082709 1 + 78221452 a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201619 1 + 77229886 a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421186 1 + 17472758 a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461714 1 - 152096393 a i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411350 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102664 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661939 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273825 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102387 1 - 72318688 g i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439176 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535055 1 + 6513552 a i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19493525 1 - 31320352 A i saiBol1.JH378121 C 0 I 1 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e canFam3.chr1 112345503 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I e aotNan1.NW_018502140v1 3641851 12 - 14941987 I e cebCap1.NW_016107689v1 1689254 29 + 2203405 I a score=33886.000000 s hg38.chr18_GL383571v1_alt 172720 10 + 198278 aaaaaaaa-------------------------aC s panTro5.chr18 65082710 19 + 78221452 aaaaaaaa----------------aaaaaaaaCAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201620 10 + 77229886 aaaaaaaa-------------------------CC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421187 35 + 17472758 caaacaaacaaacaaacaaacaaacaaacaaacaC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461715 10 - 152096393 aaaaaaaa-------------------------aC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411351 23 + 70235451 caaacaaa------------taaacaaacaaaaaC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102665 23 - 75711847 caaacaaa------------taaacaaacaaaaaC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661940 23 - 18804593 caaacaaa------------taaacaaacaaaaaC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273826 23 + 18905526 caaacaaa------------taaacaaacaaaaaC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102388 23 - 72318688 caaacaaa------------caaacaaacaaaaaC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439177 23 - 1517660 caaacaaa------------taaacaaacaaaaaC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535056 23 + 6513552 caaacaaa------------caaacaaacaaaaaC i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19493527 9 - 31320352 --AAAAAA------------TAA------------ i saiBol1.JH378121 I 1 C 0 s cebCap1.NW_016107689v1 1689283 9 + 2203405 --AAAAAA------------TAA------------ i cebCap1.NW_016107689v1 I 29 C 0 s aotNan1.NW_018502140v1 3641863 9 - 14941987 --AAAAAA------------TAA------------ i aotNan1.NW_018502140v1 I 12 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e calJac3.chr13 105306970 0 + 117903854 C e dasNov3.JH575754 524087 80 - 2150887 I e canFam3.chr1 112345503 0 - 122678785 C e otoGar3.GL873546 11268508 290 - 20685099 I a score=686576.000000 s hg38.chr18_GL383571v1_alt 172730 61 + 198278 CT-CATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAACTTTCTA s panTro5.chr18 65082729 61 + 78221452 CT-CATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAACTTTCTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201630 62 + 77229886 CTACATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAACTTTCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421222 61 + 17472758 CT-CATAAAGTAACAATTCTATAAGCAGCTTATATTAGAGCAGTTTTTCAAAGAACTTTCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461725 59 - 152096393 CT-C--AAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAACTTTCTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411374 61 + 70235451 CT-CATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102688 61 - 75711847 CT-CATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13661963 61 - 18804593 CT-CATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273849 61 + 18905526 CT-CATGAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102411 61 - 72318688 CT-CATAAAGTAACAACTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439200 61 - 1517660 CT-CATAAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535079 61 + 6513552 CT-CATGAAGTAACAATTCTATATGCAGCTTATATTAGAGCAGTTTTTCAAAGAATTTTCTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105306970 61 + 117903854 CT-CATAAAATAGCAATTCTATATGCAGCTTAACTTAGAGCAGTTTTTCAAAGAATTTTCTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493536 61 - 31320352 CT-CATAAAATAACAATTCTATGTGCAGCTTACCGTAAAGCAGTTTTTCAAAGAATTTTCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689292 61 + 2203405 CT-CATAAAGTAACAATTCTATGTGCAGCTTACCTTAAAGCAGTTTTTCAAAGAATTTCCTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3641872 61 - 14941987 CT-CATAAAATAACAATTCTATGTGCAGCTTAACTTAGAGCAGTTTTTCAAAGAATTTTCTA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11268798 60 - 20685099 CT-CATAAAATAAATATTCTATGTACGGCTTAAATTAGAGCAA-TTTTCAAAGAGTTTTCTA i otoGar3.GL873546 I 290 C 0 s canFam3.chr1 112345503 57 - 122678785 CT-TAAAAACTATC---CCTATATGCTTCTTAAGATAAAGTGGTATTTC-AGGAATTATCTG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I e dasNov3.JH575754 524087 80 - 2150887 I a score=465615.000000 s hg38.chr18_GL383571v1_alt 172791 49 + 198278 G--------GAC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCCGAATATCTATATA s panTro5.chr18 65082790 49 + 78221452 G--------GAC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCCGAATATCTATATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201692 49 + 77229886 G--------GAC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCCGAATATCTATATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421283 49 + 17472758 G--------GAC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCCGAATATCTATATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461784 49 - 152096393 G--------GAC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCTGACTATCTATATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411435 49 + 70235451 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTATATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102749 49 - 75711847 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTATATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662024 49 - 18804593 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTATATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273910 49 + 18905526 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTATATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102472 49 - 72318688 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTATATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439261 49 - 1517660 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTATATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535140 49 + 6513552 G--------GGC---------CCCAAATTTTTCTGGCAGCATTTTTAAAGGCCAAGTATCTGTATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307031 47 + 117903854 G--------GGC---------CCAAAATTTTTCTGGGAACATTTTTAAAAGCCAAGTATC--TGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493597 47 - 31320352 G--------GGC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCCAAGTATC--TATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689353 47 + 2203405 G--------GGC---------CCCAAATTTTTCTGAGAGCATTTTTAAAAGACAAGTGTC--TATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3641933 47 - 14941987 G--------GGC---------CCAAAATTTTTCTGGGAGCATTTTTAAAAGCCAAGTATC--TACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11268858 57 - 20685099 G--------GTTCTATTTGTACCAAAAATCTTTTAGGAGCATTTTAAAAAACCAGGTATCTGTGT- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112345560 56 - 122678785 GTCTGCATTtgt---------accaaattctttcagaaaccttttaaaaacctaaatttctgtgt- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524167 43 - 2150887 ----------GT---------ACCAAATTTCTTT--CACctttttaaaaacatagattaccgtg-- i dasNov3.JH575754 I 80 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1295950 298 - 1406956 I a score=409321.000000 s hg38.chr18_GL383571v1_alt 172840 30 + 198278 TCCATTACAGATCCTTTCTGAAATAGAGTT s panTro5.chr18 65082839 30 + 78221452 TCCATTACAGATCCTTTCTGAAATAGAGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201741 30 + 77229886 TCCATTACAGATCCTTTCTGAAATAGAGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421332 30 + 17472758 TCCATTACAGATCCTTTCTGAAATAGAGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461833 30 - 152096393 TCCATTACAGATCCTTTCTGAAATAGAGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411484 30 + 70235451 TCCATTACAGATCCtttctgaaatagagtt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102798 30 - 75711847 TCCATTACAGATCCtttctgaaatagagtt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662073 30 - 18804593 TCCATTACAGATCCtttctgaaatagagtt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273959 30 + 18905526 TCCATTACAGATCCtttctgaaatagagtt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102521 30 - 72318688 TCCATTACAGATCCtttctgaaatagagtt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439310 30 - 1517660 TCCATTACAGATCCtttctgaaatagagtt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535189 30 + 6513552 TCCATTACAGATCCtttctgaaatacagtt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307078 30 + 117903854 TCCATTACAGATCCTTTTTGAAACAGAGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493644 30 - 31320352 TCCATTACAGATCCTTTTTGAAACAGAGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689400 30 + 2203405 TCCATTACAGATCCTTTTTGAAACAGAGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3641980 30 - 14941987 TCCATTACAGATCCTTTTTGAAACAGAGTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1296248 30 - 1406956 TCCATTAGAAATCCTTTTTGAATCAGACTG i proCoq1.NW_012148742v1 I 298 C 0 s otoGar3.GL873546 11268915 29 - 20685099 -CCGTTAGGGATCTTTCTTGAACCAGACTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112345616 29 - 122678785 -ctgttagagatccttttggaatcagaatc i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524210 29 - 2150887 tccatcagagacacttt-tgaatctgaatc i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41555586 327 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=4263194.000000 s hg38.chr18_GL383571v1_alt 172870 274 + 198278 TTGATCGGGGCATAAAAATTTGCATTTTTATCAGGTTTACCAATACAATATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC---------------------------------------------------TTTTGTCTTCCCATCAGTTCCAGCCAGAATTTTAGGCACATACTTTCCACTCAGTTAA--CTC--ACTGAATTGAATAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT s panTro5.chr18 65082869 274 + 78221452 TTGATCGGGGCATAAAAATTTGCATTTTTATCAGGTTTACCAATACAATATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTAC---------------------------------------------------TTTTGTCTTCCCATCAGTTCCAGCCAGAATTTTAGGCACATACTTTCCACTCAGTTAA--CTC--ACTGAATTGAATAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64201771 274 + 77229886 TTGATCGGGGCATAAAAATTTGCATTTTTATCAGGTTTACCAATACAATATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTAC---------------------------------------------------TTTTGTCTTCCCATCAGTTCCAGCCAGAATTTTAGGCACATACTTTCCACTCAGTTAA--CTC--ACTGAATTGAATAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421362 274 + 17472758 TTGATCGGGGCATAAAAATTTGCATTTTTATCCGGTTTACCAATACAATATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC---------------------------------------------------TCTTGTCTTCCCATCAGTTCCAGCCAGAATTTTAGGCACATACTTGCCACTCAGTTAA--CTC--ACTGAATTGAATAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139461863 274 - 152096393 TTGATCAGGGCATAAAAATTTGCATTTTTATCAGGTTTACCAATACAAGATTAAGAATCAGCTAATTAAACCATTCTGTCCTTAGAGACAGAAATTGGGCACTGTCCTTC---------------------------------------------------TTTTGTCTTGCCATCAGTTCCAGCCAGAATTTTAGGCACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAGATTAAGGTCAAATGTTTTAGTTATATAAAAATCTATGAAGCACATGTATAAAGGAATCATTTTCAAAGATATAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411514 275 + 70235451 ttgatcggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAACTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63102828 275 - 75711847 ttgattggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAACTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662103 275 - 18804593 ttgatcggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAACTAATTAAACCATTCTGTCCTTGGAGAAAGAAATTGGGCACTGTCCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13273989 275 + 18905526 ttgatcggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102551 275 - 72318688 ttgatcggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439340 275 - 1517660 ttgatcggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAGCTAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGTTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535219 274 + 6513552 ttgatcggggcacgaaaatttgcatttttatcaggttTACCAATACAAGATTAAGAATGAGCTAATTAAACCATCCTGTCCTTGGAGACAGAAATTGGGCACTG-CCTTC--------------------------------------------------TTTTTTTCTTCCCATCAGTTCCAGCCAGAATTTTAGGGACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATCAAATTAAGGTCAAATGCTTTAATTATATAAAAATCTATGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307108 273 + 117903854 ATGACTGGGGCATGAAAATTTGCATTTTTATCAGGTTTACCAATAAAAGATTGAGAACGAGTGAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC---------------------------------------------------TTTTGTCTTCCCATCACTTCCAGCCAGAATTTTAGGCACATACTTTCCACTCAGTTAA--CTC--ATTAAATTGAACAGTGGTGGAATGAAATT-AGGTCAAATGTTTTAATTATATAAAAATCTCTGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493674 272 - 31320352 ATGATTGGGGCATGAAAATTTGCA-TTTTATCAGGTTTACCAATAAAAGATTGAGAACGAGCGAATTAAACCATTCTGTCCTTGGAGACAGAAATTGGGCACTATCCCTC---------------------------------------------------TTTTGTCTTCCGATCACTTCCAGCCAGAATTTTAGACACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATGAAATT-AGGTCAAATGTTTTAATTATATAAAAATCTCTGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689430 273 + 2203405 ATGATTGGGACATGAAAATTTGCATTTTTATCAGGTTTACCAATAAAAGATTGAGAACGAGCGAATTAAATCATTCTGTCCTTGGAGACAGAAATTGGGCACTGTCCTTC---------------------------------------------------TTTTGTCTTCCCATCACTTCCAGCCAGAATTTTCGGCACGTACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATGAAATT-AGGTCAAATGTTTTAATTATATAAAAATCTCTGAAGCACATGTATAGAGGAATCATTTTCAAATATATAATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642010 273 - 14941987 ATGATCAGGGCATGAAAATTTGCATTTTTATCAGGTTTACCAATAAAAGATTGCGAACGAGCTAATTAAACCATTCTGTCCTTAGAGACAGAAATTGGGCACTGTCCTTC---------------------------------------------------TTTTGTCTTCCCATCACTTCCAGCCAGAATTTTAGGCACATACTTTCCACTCAGTTAA--CTC--ATTGAATTGAACAGTGGTGGAATGAAATC-AGGTCAAATGTTTTAATTATATAAAAATCTCTGAAGCACATGTATAGAGGAATCATTTTCAAAGATATAATTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41555913 274 + 83067054 ttgatcagggcatgaaaatttacatttttatcaagttTGCCAATAAAATTTTGAAAAAGAGCTAATTAAACCTTTCTATCCTTAAGGCCAAAAATTATGCATTGTCCTTC---------------------------------------------------TTTTGTCTTCCCACCAGTTCCAGCCAGAATTTTAGGCATATACTTTCTATTTAGTTAA--CTC--ATAGAATTGAATTCTGGTGGAATCAAATTAAGGTCAGATGTTTTGATTATATAAAAATCTGTGAAGCACATCTATAGATGACTCATTTCCAAAGATACAATTT i micMur3.chr19 I 327 I 131 s proCoq1.NW_012148742v1 1296278 274 - 1406956 TTGATCATGGCATGGAAATTTACATTTTTAACAAGTTTGCCAATAAAGGTTTGAGAAAGAACTAATTAAACCATTCTGtccttgaggccagaaattatgcattgtccttc---------------------------------------------------ttttgtcttcccatcagttccagccagaattttaggcatataCTTTCTACTTAGTTAA--CTC--ATAGAATTGAACTGTGGTGGAATCAAATTAAAGTGAGATGTTTTGATTATATAAAAATCTGTGAAGCATATCTATAGATGACTCAATTCCAAATATACAACTT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11268944 270 - 20685099 TTGATCAGGGCATAAAAATTTGCATTTTTATCAAGTTTACCAATAAAAGCTTGAGAAAGAGCTGATTAAACCATTCTATCCTTGAGGCCAAAAATTATGCATTTTC--TC---------------------------------------------------TTTTGTCTTCTCATCAATTCCAGCCAGAAGTTTAGGCCTCCACTTTCTACTTAGTTCA--CTC--ATAGAACTGAACTGTGGTGGAATCAAATTAAGGGCAAATGTTTTGATTCTATAAAACTCTGTGAAATACATCTATAGACAACTCATTTCCAA--ACACAATTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112345645 325 - 122678785 -ttagtggggcataagaatttgcatttttatcaggttTACCAATAACAT-TTGAGAACTAGCTGATTAAACTATTATGTCTTTGGGATCAGAAATTGTGCAttttttcttttctctctctctctctctctctctctctctcttttttttttttttttttttttttGGATTCCCATCTGTTCCAGCCAGAATTTTAGGCAGGCACTTTTCACTCAGTTAA--CTCTTATTGAATTGAACTGTGGTGAAATCAAATTATGGCAAAATGTTTTGATTATATAAAAATCTGTGAAGCACATGTATGGATGAATCATTTCCAAAGATATCATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524239 269 - 2150887 ttgagtggggcttgggaatttgtattttcatgaagtttatcaattaaagtttgagaaccaGCTAATTAGACCATTCTGTCCTTGAGGCCAGAAAGTACACATTGTC---C---------------------------------------------------TTTCATATTTTCATCAGTTCCAGTCAGCATTTTAGGCAT----TTTTCATTCAGCTAATTCTC--ATTGAACTGAACTGTAGTGGAATCAATTAATGGTCAAATGTTTTGATTATACAAAAATTTGTGAAGCACATGGATGAATGAATCAGTTCCAATGATATAGTTT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=1470589.000000 s hg38.chr18_GL383571v1_alt 173144 140 + 198278 TTACAATTTACTGTGAATTACAGGCATAATTATCCTGCCAGATATACTTGTCTGCCTAGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACATACTTCGCATATGTAT-------------TATATATAAGAG---ACAAAGAGGGATAG--------- s panTro5.chr18 65083143 140 + 78221452 TTACAATTTACTGTGAATTACAGGCATAATTATCCTGCCAGATATACTTGTCTGCCTAGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACATACTTCACATATGTAT-------------TATATATAAGAG---ACAAAGAGGGATAG--------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202045 140 + 77229886 TTACAATTTCCTGTGAATTACAGGCATAATTATCCTGCCAGATATACTTGTCTGCCTAGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACATACTTCACATATGTAT-------------TATATATAAGAG---ACAAAGAAGGATAG--------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421636 140 + 17472758 TTACAATTTACTGTGAATTACAGGCATAATTATCCTGCCAGATATACTTGTCTGCCCAGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACATACTTCACATATGTAT-------------TATATATAAGAG---ACAAAGAGGGATAG--------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462137 140 - 152096393 TTACAATTTACTGTGAATTACAGGCATAATTGTCCTGTCAGATATACTTGTCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATGTGATACATACTTCACATATGTAT-------------TATATATAAAAG---ACAAAGAGGGATAG--------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411789 140 + 70235451 TTATAATTTACTTTGAATTACAAGCATAATTATCCTGTCAGATATATCTGTCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACCTGCTTCACATATGTAT-------------TATACATAAAAG---ACAAAGAGAGATAG--------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103103 140 - 75711847 TTATAATTTACTTTGAATTACAAGCATAATTATCCTGTCAGATATATCTGTCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACCTGCTTCACATATGTAT-------------TATACATAAAAG---ACAAAGAGAGATAG--------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662378 140 - 18804593 TTATAATTTACTTTGAATTACAAGCATAATTATCCTGTCAGATATATCTGTCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACCTGCTTCACATATGTAT-------------TATACATAAAAG---ACAAAGAGAGATAG--------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274264 140 + 18905526 TTATAATTTACTTTGAATTACAAGCATAATTATCCTGTCAGATATATCTATCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACCTGCTTCACATATGTAT-------------TATACATAAAAG---ACAAAGAGAGATAG--------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102826 140 - 72318688 TTATAATTTACTTTGAATTACAAGCATAATGATCCTGTCAGATATATTTGTCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATTTGATACCTGCTTCACATATGTAT-------------TATACATAAAAG---ACAAAGAGAGATAG--------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439615 140 - 1517660 TTATAATTTACTTTGAATTACAAGCATAATTATCCTGTCAGATATATCTGTCTGCCTGGCAAATATATGTATATATGA------TACTTGTGAAATTTGTTACCTGCTTCACATATGTAT-------------TATACATAAAAG---ACAAAGAGAGATAG--------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535493 140 + 6513552 TTATAATTTACTTTCAATTACAAGCATAATTATCCTGTCAGATATATTTGTCTGCCTGACAAATATATGTATATATGA------TACTTGTGAAATTTGATACCTCCTTCACATGTGTAT-------------TATGCATAAAAG---ACAAAGAGAGATAG--------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307381 136 + 117903854 ATACAATTCACTCTGAATTACAAGCATGATTCTCCTCTCAGATATATTTGTCTG----TCAAATATATGTATATATGA------TACTTGTGaaatttaatttatactttatatatttat-------------tatatataaatG---ACAAAGAGGGACAG--------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19493946 136 - 31320352 CTATGATTCACTCTGAATTACAAGCATGATTCTCCTGTCAGATATGTCTGTCTG----GCAAATATATGTATATATGA------TACTTGTGAAATTTGATGTATACTTTACATATTTAT-------------TATATATAAAAG---ACAAAGAGGGATAG--------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689703 136 + 2203405 CTACGATTCACTCTGAATTACAAGCATGATTCTCCTGTCAGATATATTTGTCTG----GCAAATATATGTATATAAGA------TGCTTGTGAAATTTGATGTATATTTTACCTATTTAT-------------TATATATAAAAG---ACAAAGAGGGATAG--------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642283 136 - 14941987 CTACGATTCACTCTGAATTACAAGCATGATTCTCCTGTCAGATATATTTGTCTG----GCAAatatatgtatatatga------tacttgtgaaatttgatgtatactttacatatttat-------------tatatataAAAG---ACAAAGAGGGATAG--------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1296552 142 - 1406956 AGATAATTTTCTTTTAATTACAAGCATAATTCTCCTGCCAGATATATTTGTCTG----GAAAatgtatgtgtatgtatatataagacatatgagatatgatatatactttatatttatat-------------catatatataAG---ACAGAGAGGGAGAG--------- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11269214 129 - 20685099 ATCTATGTTTATTTTAATTACAAGCTCAATTCTTCTTCCAGAGATATTTGTCTG----GAAAatatatgtgtatgtat---------atatgagatatgatacata---tatatatataCA------CACACACACACACATCTG---ATAGAA----------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112345970 134 - 122678785 ATAAAATTTTATCTGAATTAGAAACATAGTTCTCTTGCCAGATATATTCCTCTTTCTGGAGAATATATATATGAGAGA------GA-GAGAGAGAGATAGGAGAAAATTAGCCT-----T-------------GAGACAAATGGA---ATCTAGTTTAACAG--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524508 151 - 2150887 ATGTAATGTGCTCTAAATTAGAAGTCTCACTCTCCTGACAGATATA--TATCTA------AAGAATATGTACATA-GA------TA-----GAGAATGCatatatattatatgtgtatataaataattatatatatgtatatatGTGTTTGGGGAGGTGTACTTCAAATGA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41556187 131 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=933045.000000 s hg38.chr18_GL383571v1_alt 173284 65 + 198278 AGAGAGGAGAAAA-TTAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATTTTGGAtattagtcatct-at s panTro5.chr18 65083283 65 + 78221452 AGAGAGGAGAAAA-TTAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATTTTGGAtattagtcatct-at i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202185 65 + 77229886 AGAGAGGAGAAAA-TTAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATTTTGGAtattagtcatct-at i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421776 65 + 17472758 AGAGAGGAGAAAA-TTAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATTTTGGAtattagtcatct-at i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462277 65 - 152096393 AGAGAGGAGAAAA-TTAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATTTTGGAtattagtcatct-at i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411929 65 + 70235451 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103243 65 - 75711847 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662518 65 - 18804593 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274404 65 + 18905526 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60102966 65 - 72318688 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439755 65 - 1517660 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535633 65 + 6513552 AGAGAGGAGAAAA-TCAGCTTTCAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGAtactagtcatct-at i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307517 66 + 117903854 AGAGAGGAGAAAA-ATAGCTTTGAGGTCAGTT----------------------------------------TTTGAAGAATGTTATCTTGGCtattagtcatct-at i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494082 66 - 31320352 AGAGAGGAGAAAA-ATAGCTTTGAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGCtattcgtcatcgaat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689839 65 + 2203405 AGAGAGGAGAAAA-ATAGCTTTGAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGCtattagtcatct-at i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642419 65 - 14941987 AGAGAGGAGAAAA-ATAGCTTTGAGGCCAA-T----------------------------------------TTTGAAGAATGTTATCTTGGCtattagtcatct-at i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41556318 65 + 83067054 AGAGAGAGGAAAA-TTAGCTTTCAAGACAG-T----------------------------------------TTTAAAGAATGTTAACTTGGACatgagttatct-at i micMur3.chr19 I 131 C 0 s proCoq1.NW_012148742v1 1296694 61 - 1406956 ----AGAGGAAAA-TTAGCTTTCAAGACAG-T----------------------------------------TTTGAAGAATGTTAACTTGGAtattagtaatct-at i proCoq1.NW_012148742v1 C 0 I 1171 s otoGar3.GL873546 11269343 64 - 20685099 AAAAAGAGGAAAA-TTAGCTTTTAAAACAG-T----------------------------------------TTTGAAGAATGTTAACTGGAAtattagttatct-a- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112346104 65 - 122678785 AGAGGGGTTAAAACCCAAATATCAGGCCAA-T----------------------------------------TTTGAAGAACGTTAGCTTGGAAATT-gctatcc-at i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524659 105 - 2150887 AAAGTGAGGAAAA-TTAGCTTTCAGACAAA-TGGAATATGGTTTTTCATGGAGGATCCAAATACCATGGTAACTGAAGAAATGTTAGCTTGGGGatttgttatct-at i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=296905.000000 s hg38.chr18_GL383571v1_alt 173349 21 + 198278 tgctgcataacaaattgtcac s panTro5.chr18 65083348 21 + 78221452 tgctgcataacaaattgtcac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202250 21 + 77229886 tgctgcataacaaattgtcac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421841 21 + 17472758 tgctgcataacaaattgtcac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462342 21 - 152096393 tgctgcataacaaattatcac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57411994 21 + 70235451 tgctgcatagcaaattatcac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103308 21 - 75711847 tgctgcatagcaaattatcac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662583 21 - 18804593 tgctgcatagcaaattatcac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274469 21 + 18905526 tgctgcatagcaaattatcac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60103031 21 - 72318688 tgctgtgtaacaaattatcac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439820 21 - 1517660 tgctgcatagcaaattatcac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535698 21 + 6513552 tgctgcgtaacaaattatcac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307583 21 + 117903854 tgctgtataactaattatccc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494148 21 - 31320352 tgctgtataacaaattatccc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689904 21 + 2203405 tgctgtataacaaattatccc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642484 21 - 14941987 tgctgtataacaaattatcct i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41556383 21 + 83067054 tgctacgtcacaaattatcac i micMur3.chr19 C 0 I 1849 s otoGar3.GL873546 11269407 21 - 20685099 tgctacatcacaaatgatcct i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112346169 21 - 122678785 tgctgcataacaaattatccc i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524764 21 - 2150887 tgctacataacaaattatccc i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I a score=1396174.000000 s hg38.chr18_GL383571v1_alt 173370 130 + 198278 caaacttgctagctgaaaagaaacagaagtttattttttcacacaatttctaatcattatcaa-tcaaagcagcttaattaactgaatggttc-tggtctgggtcgctcagagggttatagccaagatgtcT s panTro5.chr18 65083369 130 + 78221452 caaacttgctagccgaaaagaaacagaagtttattttttcacacaatttctaatcattatcaa-tcaaagcagcttaattaactgaatggttc-tggtctgggtcgctcagagggtcatagccaagatgtcT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202271 130 + 77229886 caaacttgctagctgaaaagaaacagaagtttattttttcacacaatttctaatcattatcaa-tcaaagcagcttaattaactgaatggttc-tggtctgggtcgctcagagggttatagccaagatgtcT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421862 130 + 17472758 caaacttgctagctgaaaaggaacagaagtttattttttcacacaatttctaatcattatcaa-tcaaagcagcttaattaactgaatggttc-tggtctgggtcgctcagagggttatagccaagatgtcT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462363 130 - 152096393 caaacttgctagctgaaaagaaacagaagtttattttttcacacaatttctgatcattaccaa-tcaaagcagcttaattaactgaatggttc-tgatctgggtcgctcagagggttatagccaagatgtcg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412015 130 + 70235451 caaacttgccagctgaaaagaaacaaaagtttattttttgacacaatttctgatcattgacaa-taaaagcagcttaattaactgaatggttc-tgatctgggtggctcagagggttatagccaagatgtcT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103329 130 - 75711847 caaacttgccagctgaaaagaaacaaaagtttattttttgacacaatttctgatcattgacaa-taaaagcagcttaattaactgaatggttc-tgatctgggtggctcagagggttatagccaagatgtcT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662604 130 - 18804593 caaacttgccagctgaaaagaaacaaaagtttattttttgatacaatttctgatcattgacaa-taaaagcagcttaattaactgaatggttc-tgatctgggtggctcagagggttatagccaagatgtcT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274490 130 + 18905526 caaacttgccagctgaaaagaaacaaaagtttattttttgacacaatttctgatcattgacaa-taaaagcagcttaattaactgaatggttc-tgatctgggtggctcagagggttatagccaagatgtcT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60103052 130 - 72318688 aaaacttgccagctgaatagaaacaaaagtttattttttgacacaatttctgatcattgacaa-tcaaagcagcttaattaactgaatggtgc-tgatctgggtggctcagagggttatagccaagatatcT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439841 130 - 1517660 caaacttgccagctgaaaagaaacaaaagcttattttttgacacaatttctgatcattgacaa-taaaagcagcttaattaactgaatggttc-tgatctgggtggctcagagggttatagccaagatgtcT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535719 130 + 6513552 aaaacttgccagctgaaaataaacaaaagtttattttttgacacaatttccgattattgacaa-tcaaagcagcttaattaactgaatggttc-tgatctgggtggctcaaaaggttatagccaagatatcT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307604 124 + 117903854 caaacttggcagctgtaaacaaacaacagtttattttttcacacaatttctgagcactaacaa-tcaaagcagcttaattaacagga-------tggtcagggccactcagagggttatagccaatatatTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494169 129 - 31320352 caaacttggcagctgtaaacaaacaacaattta-tttttcacacaatttctaagcattaacaa-tccaagcagcttaattaacaggatggtcc-tggtcagggccactcagagggttatagccaatatAATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1689925 130 + 2203405 caaatttggcagctgtaaacaaacaacagtttattttttcacacaatttctgagcattaacaa-tgaaagcagcttaattaacaggatggtcc-tggtcagggtcacttagagggttatagccaatatatTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642505 130 - 14941987 caaacttggcagctgtaaacaaacaacagtttattttttcacacaatatctgaacattaacaa-tcaaagcagcttaattaacaggatggtcc-tggtcagggtcactcagagggttatagccaatatatTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11269428 124 - 20685099 agcacttggcagctg-aaataggcaaacatttatattctcacataatttctacagactagcaa-ttaaagaaacttact----agaatgtttc-tggtcaaggtctctgaggaggtt-tattcgagatgCTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112346190 127 - 122678785 aaaacttggcagttgaaaacaaacaaacattccttatctcagacaatttttgagaattaacaactgggaacagttta----acaagatggttc-tagccagggtttctcaagaggctggggtcaagatgtcT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524785 125 - 2150887 aaaaattggcagctgaaaa----caaaattttactttcccatacattttctgaagattaagaa-tccaag-agc-tgctgaacaggatagttcttgctctgggtctcctaggaggttgtactgaagatgtct i dasNov3.JH575754 C 0 I 1 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I a score=694389.000000 s hg38.chr18_GL383571v1_alt 173500 65 + 198278 GTATTTTAACCATATTACCTTG-TGTGGG--ATATGATGAGGCCAGATGTAGATCGAAAAAGAGAAAC s panTro5.chr18 65083499 65 + 78221452 GTATTTTAACCATATTACCTTG-AGTGGG--ATATGAAGAGGCCAGATGTAGATCGAAAAAGAGAAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202401 65 + 77229886 GTATTTTAACCATATTACCTTG-TGTGGG--ATATGATGAGGCCAGATGTAGATCGAAAAAGAGAAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5421992 65 + 17472758 GTATTTTAACCATATTACCTTG-TGTGGG--ATATGATGAGGCCAGATGTAGATCGAAAAAGAGAAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462493 64 - 152096393 gTATTTTAACTGTATTACCTTG-TGTGGG--GTATGACAAGGCCAGATGTAGAT-GAAAAAGAGAAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412145 65 + 70235451 GTATTTTAACTGTATTACCTTG-TGTGGG--GTATGGCAAGGTCAGATGTAGATTGAAAAAGAGAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103459 65 - 75711847 GTATTTTAACTGTATTACCTTG-TGTGGG--GTATGGCAAGGTCAGATGTAGATCGAAAAAGAGAAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662734 65 - 18804593 GTATTTTAACTGTATTACCTTG-TGTGGG--GTATGGCAAGATCAGATGTAGATCGAAAAAGAGAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274620 65 + 18905526 GTATTTTAACTGTATTACATTG-TGTGGG--GTATGGCAAGGTCAGATGTAGATCGAAAAAGAGAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60103182 65 - 72318688 GTATTTTAACTGTATTACCTTT-TGTGGG--GTATGGCAAGGTCAGATGTAGATCGAAAAAGAGAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 439971 65 - 1517660 GTATTTTAACTGTATTACCTTG-TGTGGG--GTATGGCAAGGTCAGATGTAGATCGAAAAAGAGAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535849 66 + 6513552 GTATTTTAACCGTATTACCTTGTTGTGGA--GTATGGCAAGGTCAGATGTAGATCGAAAAAGAGAAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307728 65 + 117903854 GTATTTTAACCATATTACCTTG-GGTGGG--GTATGACAAGGCCGGATGCAGATAAAAAAGGAGAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494298 65 - 31320352 GTATTTTAACCATATTACCTTG-GGTAGG--GTATGACAAGGCCAGATGCAGATAAAAAAAGAGAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1690055 65 + 2203405 GTATTTTAACCATATTACCTTA-GGTGGG--GTATGACAAGGCCAGATGCAaataaaaaaagagaaat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642635 65 - 14941987 GTATTTTAACCATATTACCTTG-GGTGAG--GTATGACAAGGCCAGATGCAGataaaaaaaagagaat i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11269552 67 - 20685099 ATATTTTTACCATGTTACCTTA-GGTGGGCACtatggtaaggccagatgcagatcaagagatataaac i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112346317 65 - 122678785 GTGTTTTGACCACATTACACTG-AGTGag--gtatggtgaggcctcactgagatcaagagagaagagc i canFam3.chr1 C 0 I 52 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 524910 1 - 2150887 I a score=15727.000000 s hg38.chr18_GL383571v1_alt 173565 2 + 198278 AG s panTro5.chr18 65083564 2 + 78221452 Ag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202466 2 + 77229886 Ag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5422057 2 + 17472758 Ag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462557 2 - 152096393 Ag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412210 2 + 70235451 gg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103524 2 - 75711847 gg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662799 2 - 18804593 gg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274685 2 + 18905526 gg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60103247 2 - 72318688 gg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 440036 2 - 1517660 gg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535915 2 + 6513552 gg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307793 2 + 117903854 gg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494363 2 - 31320352 AG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1690120 2 + 2203405 gg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642700 2 - 14941987 gg i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11269619 2 - 20685099 tg i otoGar3.GL873546 C 0 I 83 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 524910 1 - 2150887 I e canFam3.chr1 112346382 52 - 122678785 I a score=3403164.000000 s hg38.chr18_GL383571v1_alt 173567 365 + 198278 CTGAGCATGA-TGGATAAGGTGTGaacactttgggaggctgaggtgggaggattgcatgagcccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaatatttttaaaaaattatctggtcatggtagtgtgcacctgtagccccagctgctgaggaagctgaggtggggagatcccttgagcccaaaagttagaggctacagttagctatgatcaggccactgcactccagcctgggcaacagagtgagacAATCTCTAAATA----------------------------------------------------------------ATAGTAAT---AATTTAGAAAGACAGAGGGAGAAACTGGAGGGAGTCCTACAGTTCTGCTAtactcacagctcactggggagaaatag s panTro5.chr18 65083566 365 + 78221452 ctgagcatga-tggatcaggtgtgaacactttgggaggctgaggtgggaggattgcatgagcccaggagttcaagaccagcctgtgcaacatcgtgaaacctcatccataagaaatatttttaaaacattatctggtcatggtagtgtgcacctgtagccccagctgctgaggaagctgaggtggggagatcccttgagcccaaaagttagaggctactgttagctatgatcaggccactgtactccagcctgggcaacagagtgagacAATCTCTAAATA----------------------------------------------------------------ATAATAAT---AATTTGGAAAGACAGAGGGAGAAACTGGAGGGAGTCCTACAGTTCTGCTAtactcacagctcactggggagaaatag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202468 365 + 77229886 ctgagcatga-tggatcaggtgtgaacactttgtgaggctgaggtgggaggattgcatgaacccaggagttcaagaccagcctgtgcaacatcgtgaaacctcatccataagaaatatttttaaaacattatctggtcatggtagtgtgcacctgtagccccagctgctgaggaagctgaggtggggagatcccttgagcccaaaagttagaggctactgttagctatgatcaggccactgtactccagcctgggcaacagagtgagacAATCTCTAAATA----------------------------------------------------------------ATAATAAT---AATTTAGAAAGACAGAGGGAGAAACTGGAGGGAGTCCTACAGTTCTGCTAtactcacagctcactggggagaaatag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5422059 367 + 17472758 ctgagcatga-tggatcaggtgtgaacactttgggaggctaaggtgggaggattgcatgagcccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaatatttaaaaaaaattatctggtcatggtagtgtgcacctgtagccccagctactgaggaagctgaggtggggagatcccttgagcccagaagttagaggctacagttagctatgatcaggccactgcactccagcctgggcaacagagtgagac-ATCTCTAAATA----------------------------------------------------------------ATAATAATAACAATTTAGAAAGACAGAGGGAGAAACTGGAGGGAGTCCTACAGTTGTGCTAtactcacagctcactggggagaaatag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462559 368 - 152096393 ctgagcatga-tggatcaggtgtgaacacgttgggaggctgaggtgggaggattgcatgatcccaggagttcaagaccagcctgtgcaacatagtgaaacctcacccataagaaatattttttaaaaattatctggtcatggtagtgtgcacctgtagccccagctactgaggaagctgaggtggggagatcccttgagcccagaagttagaggctacagttagctatgatcaggccactgcactccagcctgggcaacagagtgagacAATCTCTAaata----------------------------------------------------------------ataataataataatTTAGAAAGACAGAGGGAGAAACTGGAAGGAGTCCTACAGTTGTGCTAtactcacagctcactggggagaaatag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412212 383 + 70235451 ctgagcatga-tggatcaggcgtgaacactttgggaggctgaggtgggaggattgtatgagcccaggagttcaagaccagcctgtgcaacgtagtgaaacctcatccataagaaacattttaaaaaaattatctggtcatggtagtgtacacctgtagcgccagctactgaggaagctgaggtggggagatcccttgagcccagaagtt-gaggctatagttagctatgatcaggtcaatgcactccagcctggccaacagagtgagacaatctctaaaaa----Gatg---------atgataata-----------------------------------ataataataataataatTTAGAAAGACAGAGGGAGAAACTGGAAGGAGTCCTACAGTTGTGCTAtactcacagctcactggggagaaacag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103526 387 - 75711847 ctgagcatga-tggatcaggcgtgaacactttgggaggctgaggtgggaggattgtatgagcccaggagttcaagaccagcctgtgcaacgtagtgaaacctcatccataagaaacattttttaaaaattatctggtcatggtagtgtgcacctgtagcgccagctactgaggaagctgaggtggggagatcccttgagcccagaagtt-gaggctatagttagctatgatcaggtcaatgcactccagcctggccaacggagtgagacaatctctaaaaaTGatgatg---------atgataata-----------------------------------ataataataataataatTTAGAAAGACAGAGGGAGAAACTGGAAGGAGTCCTACAGTTGTGCTAtactcacagcttactggggagaaatag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13662801 396 - 18804593 ctgagcatga-tggatcaggcgtgaacactttgggaggctgaggtgggaggattgtatgagcccaggagttcaagaccagcctgtgcaacgtagtgaaacctcatccataagaaacatttttaaaaaattatctggtcatggtagtgtgcacctgtagcgccagctactgaggaagctgaggtggggagatcccttgagcccagaagtt-gaggctatagttagctatgatcaggtcaatgcactccagcctggccaacggagtgagacaatctctaaaaaTGATGATGataataataataataata-----------------------------------ataataataataataatTTAGAAAGACAGAGGGAGAAACTGGAAGGAGTCCTACAGTTGTGCTAtactcacagctcactggggagaaatag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13274687 384 + 18905526 ctgagcatga-tggatcaggcgtgaacactttgggaggctgaggtgggaggattgtatgagcccaggagttcaagaccagcctgtgcaacgtagtgaaacctcatccataagaaacatttttaaaaaattatctggtcatggtagtgtgcacctgtagcgccagctactgaggaagctgaggtggggagatcccttgagcccagaagtt-gaggctatagttagctatgatcaggtcaatgcactgcagcctggccaacagagtgagacaatctctaaaaa---TGata---------ataataata-----------------------------------ataataataataataatTTAGAAAGACAGAGTGAGAAACTGGAAGGAGTCCTACAGTTGTGCTAtactcacagctcactggggagaaatag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60103249 356 - 72318688 ctgagcatga-tggatcaggtgtgaacactttgggaggctgaggtgggaggattgcatgagcctgggagttcaagaccagcctgtgcaacgtagtgaaacctcatccataagaaacatttaaaaaaaattatctgttgatggtagtgtgcacctgtagcgccagctactgaggaagctgtggtggggagatcccttgagcctggaagttagaggctatagttagctatgatcaggtcaatgcactccagcctggccaacagactgagac---------------------------------------------------------------------------AATAATAATAATAATTTAGAAAGACAGACAGAGAAACTGGAAGGAGTCCTACAG-TGTGCTAtactcacagctcactggggagaaatag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 440038 374 - 1517660 ctgagcatga-tggatcaggcgtgaacactttgggaggctgaggtgggaggattgtatgagcccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaacattttaaaaaaattatctggtcatggtagtgtgcacctgtagcgccagctactgaggaagctgaggtggggagatcccttgagcccagaagtt-gaggctatagttagctatgatcaggtcaatgcactccagcctggccaacagagtgagacaatctctaaaaa---TGatg---------------ata-----------------------------------ataataataataataatTTAGAA----AGAGGGAGAAACTGGAAGGAGTCCTACAGTTGTGCTAtactcacagctcactggggagaaattg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3535917 383 + 6513552 ctgagcatga-tggatcaggtgtgaacactttgggaggctgaggtgggaggattgcatgagcccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaagttttaaaaaaaattatctggtcatggtagtgtgcacctgtagcgccagctactgaggaagctgaggtggggagaccccttgagcccagaagttagaggctatagttagctatgatcaagtcaatgcactccagcctggccaacagagtgagacAATCTCTAaata-----ata---------ataataata-----------------------------------ataataataataataatTTAGAAAGACAGAGGGAGAAACTGGAAGGAGTCCTACAATTGTGCTAtactcacagctcactggggagaaatag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105307795 365 + 117903854 ctgagcttgg-tggattaggcatgaacactttgggaggccaaagtgggaggattgcttgag--caggagttcaagaccagcctgtgcagcatagtgaaacctcatccataagaaatatttttaaaa-attatctgggcatggtagtgtgtacctgtagcccgagctactcaagaaactgaggtgggaagatctgttaagcccagaaggtagaggttacagttagctatgatcaggccactgcactccagactgagcaacagagtgagaccatctctaa----------------------------------------------------------------attattattattattatttaGAAAGACAGGGGGAGAAACTGGGAGGACTCCTACAATTGTGCTGtattcacagctcactgggaagaaatag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494365 415 - 31320352 CTGAGCATGGTTGGATCCGGCATGaacactttaggaggccaaagtgggaagactgcttaagcccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaatattttttaaa-attatctgggcatggtagtgtgtacctatagccccagctactcaggaaactgagatgggaagatccgttaagcccagaagttagaggctacagttagctatgatcaggccactgcattccagactgagcaacagagtgagaccatctctAAATG-----------------ATAATAATAATAattattattattattatcatttaattattattattattattattatcattTAGAAAGACAGAGGGAGAAACTGGAAGGACTCCTACAGTTGTGCTGtattcacagctcactgggaagaaatag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1690122 396 + 2203405 ctgagcatgg-tggattaggcatgaacactttaggaggccaaagtgggaggattgcttgaacccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaatatttttaaaa-attatctggacatggtagtgtgtacctatagccccagctactcaggaaactgaggtgggaagatctgttaagcccagatgttagaggctacagttagctatgatcaggatactgcactccagactgagcaacagagtgagaccatctctaaata-----------------ataataataattataat------------------aatactgtaataataattattattatTTAGAAAGACAGAGGGAGAAACTGGAAGGACTCCTACAGTTGTGCTGtattcacagctcactgggaagaaatag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3642702 382 - 14941987 ctgagcatgg-tggattaggcatgaacactttaggaggccaaagtgggaggattgcttgagcccaggagttcaagaccagcctgtgcaacatagtgaaacctcatccataagaaatatttttaaaa-attatctgggcatggtagtgtgtacctatagccccagctactcaggaaactgaggtgggaagatccgttaagcccagaagttagaggctacagttagctatgatcaggccactgcactccagactgagcaacagagtgagaccatctctaaata-----------------ataataataattatt-----------------------------attattattatcattattTAGAAAGacagatggagaaactggaagga---atacagttgtgctgtattcacagctcactgggaagaaatag i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 524910 1 - 2150887 I e canFam3.chr1 112346382 52 - 122678785 I e otoGar3.GL873546 11269621 83 - 20685099 I a score=196376.000000 s hg38.chr18_GL383571v1_alt 173932 21 + 198278 caggccatgcagtgctgttca s panTro5.chr18 65083931 21 + 78221452 caggccatgcagtgctgttca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64202833 21 + 77229886 caggccatgcagtgctgttca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5422426 21 + 17472758 caggccatgcagtgctgttca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462927 21 - 152096393 caggccatgcagtgctgttca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412595 21 + 70235451 taggtcatgcaatacggttca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63103913 21 - 75711847 taggtcatgcaatacggttca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13663197 21 - 18804593 taggtcatgcaatacggttca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13275071 21 + 18905526 taggtcatgcaatgcggttca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60103605 21 - 72318688 taggtcatgcaatgcggttca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 440412 21 - 1517660 taggtcatgcaatgcggttca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3536300 21 + 6513552 taagtcatgcaatgcgattca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105308160 21 + 117903854 caggcagtgcaatgccgttca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494780 21 - 31320352 caggccgtgcaatgctggtca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1690518 21 + 2203405 caggccatgcaatgctgttca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3643084 21 - 14941987 caggccatgcaatgctgttca i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112346434 21 - 122678785 tatgccatgcagggacactca i canFam3.chr1 I 52 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 524910 1 - 2150887 I e otoGar3.GL873546 11269621 83 - 20685099 I a score=1759105.000000 s hg38.chr18_GL383571v1_alt 173953 168 + 198278 cagaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcaaaagtccttattgttctttctggaggaaggagcaggccaggcagggtaagcaggcttgtgatcaggcggcttgagtatgttcaatgggctctggtcagagggactgttcc------------------------------------------------------------------------------------------tga s panTro5.chr18 65083952 168 + 78221452 cagaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcagaagtccttattgttctttctggaggaaggagcaggccaggcagggtaagcaggcttgtgatcagccggcttaagtatgttcaatgggctctggtcagagggactgttcc------------------------------------------------------------------------------------------tga i panTro5.chr18 C 0 I 45 s panPan2.chr18 64202854 168 + 77229886 cagaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcagaagtccttattgttctttctggaggaaggagcaggccaggcagggtaagcaggcttgtgatcagccggcttgagtatgttcaatgggctctggtcagagggactgttcc------------------------------------------------------------------------------------------tga i panPan2.chr18 C 0 I 30 s gorGor5.CYUI01014964v1 5422447 168 + 17472758 aggaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcaaaagtccttattgttctttctgcaggaaggagcaggccaggcagggtaagcaggcttgcgatcagccagcttgagtacgttcaatggactgtggtcagagggactgttcc------------------------------------------------------------------------------------------tga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139462948 168 - 152096393 cagaaagcattgggcattggtcatgaggcagagggagaaagggtattggtgggcaaaagtccttattgttctttctgcaggaaggagcagaccaggtagggtaagcaggcttgcgatcagccggcttgagtacgttcaatgggctctggtcagaaggactgttcc------------------------------------------------------------------------------------------tga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412616 168 + 70235451 cggaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcaaaagtccttattgttctttctgcaggagggagcaggcaaggcagggtaagcaggcttgcaatcagccggcttgagtatgttcaatgggctctggtcagagggactgtccc------------------------------------------------------------------------------------------tga i rheMac8.chr18 C 0 I 45 s macFas5.chr18 63103934 168 - 75711847 cggaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcaaaagtccttattgttctttctgcaggagggagcaggcaaggcagggtaagcaggcttgcgatcagccggcttgagtatgttcaatgggctctggtcagagggactgtccc------------------------------------------------------------------------------------------tga i macFas5.chr18 C 0 I 45 s macNem1.NW_012016688v1 13663218 168 - 18804593 cggaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcaaaagtccttattgttctttctgcaggagggagcaggcaaggcagggtaagcaggcttgcgatcagccggcttgagtatgttcaatgggctatagtcagagggactgtccc------------------------------------------------------------------------------------------tga i macNem1.NW_012016688v1 C 0 I 90 s cerAty1.NW_012001075v1 13275092 168 + 18905526 cggaaagcactgggcattgatcatgaggcagagggagaaaggggattggtaggcaaaagtccttattgttctttctgcaggagggagcaggcaaggcagggtaagcaggcttgcgatcagccggcttgagtatgttcaatgggctctggtcagagggactgtccc------------------------------------------------------------------------------------------tga i cerAty1.NW_012001075v1 C 0 I 45 s chlSab2.chr18 60103626 165 - 72318688 tggaaagcactgggcattggtcatgaggcagagggagaaaggggattgatgggcaaaagtccttattgttatttctgcaggaggg---aggcaaggcagggtaagcaggcttgcaatcagccggcttgagtatgttcaatgggctctggtcagagggactgcccc------------------------------------------------------------------------------------------cga i chlSab2.chr18 C 0 I 45 s manLeu1.NW_012106698v1 440433 168 - 1517660 cggaaagcactgggcattggtcatgaggcagtgggagaaaggggattggtgggcaaaagtccttattgttctttctgcaggagggagcaggcaaggcagggtaagcaggcttgcgatcagccggcttgagtatgttcaatgggctctggtcagagggactgtccc------------------------------------------------------------------------------------------tga i manLeu1.NW_012106698v1 C 0 I 45 s colAng1.NW_012115433v1 3536321 168 + 6513552 tggaaagcactgggcattggtcatgaggcagagggagaaaggggattggtgggcaacagtccttattgttctttctgcaggagggagcaggcaaggcagggtaggcaggcttgtaatcagccggcttgagtatgttcaatgggctctggtcagagggactgtccc------------------------------------------------------------------------------------------tga i colAng1.NW_012115433v1 C 0 I 45 s calJac3.chr13 105308181 168 + 117903854 tggaaagcagtgggtattggtcatgaggcagaggcagaaaggggattagtgggcaaatgtccttattattctttctgcaggacggagcaggccaggcagggtaagcaggcttgcaatcagctggcttgagtatgttcaatgggttctgatcttatgggttgttcc------------------------------------------------------------------------------------------tgg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19494801 258 - 31320352 cggaaagcaatgggtattggtcatgaggcagaggtagaaaggggattggtgggcaaatgtccttattgttctttctgcagaaaggaggaggccaggcaggataagcaggcatgcaatcagctggcttgagtatgttcaatgggttctgatcatatgggttgttcctggtttcttggtacttggccctgagtgattaaggttgaggtatagtggTTTCCTAGTACTTGGCCCTGAATGATTAGGGTtgaggtatagtgg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1690539 168 + 2203405 cggaaagcaatgggtattggtcatgaggcagaggtagaaaggggattggtgggcaaatgtccttactgttctttctgcaggaaggagcaggccaggcagggtaagcaggcgtgcaatcagctggcttgagtatgttcaatgggttctgatcatatgggttgttcc------------------------------------------------------------------------------------------tgg i cebCap1.NW_016107689v1 C 0 I 180 s aotNan1.NW_018502140v1 3643105 168 - 14941987 cggaaagcaatgtgtagtgatcatgagacagaggtagaaagaggattggtgggcaaatgtccttattgttctttcttcaggaaggaacaggccaggcagggtaagcaggcttgcaatcagctggcttgaatatgttcaatgggttctgatgatatgggttgttcc------------------------------------------------------------------------------------------tgg i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11269704 144 - 20685099 ---------------------caggaggcagtgggag-aaggggaatggggggcaagtatctttaacgtggtttc-gcagtaaggaacaggtgaggcggtgtaagcaggcttaccatcagccagcttgactaaattcagtat-cccttgtcacaggggttgtcct------------------------------------------------------------------------------------------tgg i otoGar3.GL873546 I 83 C 0 s canFam3.chr1 112346455 163 - 122678785 gggaaggcaccaggtg--agtcacaggatagacagagacag---aactgagggcaagggccttccctgtgcttttggagagaaaaaatgagtgacgcagggttagcaagtttaagattggccagtttaaatcatttccttgggttctgggcattggagctgtccc------------------------------------------------------------------------------------------tgt i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 524910 1 - 2150887 I a score=1760827.000000 s hg38.chr18_GL383571v1_alt 174121 175 + 198278 tttcc---------------tggtact-------tggccctga-g-tgattagggttgaggtatagtggcacagattgtgagagcccaagaagggagttgtttgggatttggacttactctctcaagaa--caactgactggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg s panTro5.chr18 65084165 175 + 78221452 tttcc---------------tggtact-------tggccctga-g-tgattagggttgaggtatagtggcacagatcgtgagagcccaagaagggaattgtttgggatttggacttactctctcaagaa--caactgactggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i panTro5.chr18 I 45 C 0 s panPan2.chr18 64203052 190 + 77229886 gttggggtatagtggtttcctggtact-------tggccctga-g-tgattagggttgaggtatagtggcacagatcgtgagagcccaagaagggaattgtttgggatttggacttactctctcaagaa--caactgactggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i panPan2.chr18 I 30 C 0 s gorGor5.CYUI01014964v1 5422615 158 + 17472758 tttcc---------------tggtact-------tggccctga-g-tgattagggttggggtatagtggcacaaagtgtgagagcccaagaagggagttgtttgggatttggacttactctcttaag-----aactgactgga--------------tgaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139463116 176 - 152096393 tttcc---------------tggtact-------tggccctga-g-tgattagggttggggtatagtggcacagagtgtgagagcccaagaagggagttgtttgggatttggacttactctctcaagaa--caactgactggacactagctagggtctcaaaa-tggttca-gatagcattttaaaaaacTATATCACAGCTTg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57412829 175 + 70235451 tttcc---------------tggtact-------tggccttga-g-tgattagggttggggtatagtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--caactgacaggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i rheMac8.chr18 I 45 C 0 s macFas5.chr18 63104147 175 - 75711847 tttcc---------------tggtact-------tggccttga-g-tgattagggttggggtatagtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--caactgacaggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i macFas5.chr18 I 45 C 0 s macNem1.NW_012016688v1 13663476 175 - 18804593 tttcc---------------tggtact-------tggccttga-g-tgattagggttggggtatagtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--caactgacaggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i macNem1.NW_012016688v1 I 90 C 0 s cerAty1.NW_012001075v1 13275305 175 + 18905526 cttcc---------------tggtact-------tggccttga-g-tgattagggttggggtatagtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--caactgacaggacactagctagggtctcaaaa-tggttca-gatagcattta-aacaacTATATCACAGCTTG i cerAty1.NW_012001075v1 I 45 C 0 s chlSab2.chr18 60103836 175 - 72318688 tttcc---------------tggtact-------tggccttgt-g-tgattagggttggggtatagtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--caactgacaggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATCACAGCTTg i chlSab2.chr18 I 45 C 0 s manLeu1.NW_012106698v1 440646 175 - 1517660 tttcc---------------tggtact-------tggccttga-g-tgattagggttggggtatagtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--caactgacaggacactagctagggtctcaaaa-tggttca-gatagcatttt-aaaaaCTATATTACAGCTTG i manLeu1.NW_012106698v1 I 45 C 0 s colAng1.NW_012115433v1 3536534 175 + 6513552 ttt----------------------ccttgtacttggccttga-g-tgattagggttggggtatggtggcccagattgtgagagccaaagaagggagttgtttgggatttggacttactctctcaagaa--taactgacaggacactagctagggtctcaaaa-tggttca-gatagcgtttt-aaaaaCTCTATCACAGCTTG i colAng1.NW_012115433v1 I 45 C 0 s calJac3.chr13 105308349 175 + 117903854 tttcc---------------tggtact-------tggccctga-a-tgattagagttgaggtatagtggcctggagtataagagcccaagaagggagttggttgggacttggacttagtctctcaagaa--gaactgactagagactaactagggtctcacag-tggttta-gataacatttt-aaaaaCTGTATCACAGCTTg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19495059 168 - 31320352 tttcc---------------tggtact-------tggccctga-a-tcattagggttgagatatagtggcctggagtgtaagagcccaggaaggg-------tgggatttggacttagtctcccaagaa--aaactgactacagactagctagggtctcacaa-tggttta-gatagcatttt-aaaaaCTGTATCACAGCTTg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1690887 175 + 2203405 tttcc---------------tggtact-------tggccctga-a-tgattagggttgaggtatagtggcctggagtgtaagagcccaagaagggagttggttgggatttggacttagtctctcaagaa--gaactgactagagactagctagggtctcacag-tggttta-gatagcatttt-aaaaaCTGTATCACAGCTTg i cebCap1.NW_016107689v1 I 180 C 0 s aotNan1.NW_018502140v1 3643273 175 - 14941987 tttcc---------------tggtact-------tggccctga-a-tgattagggttgaggtatagtggcctggagcataagagcccaagaagggaggtggttgggatttggacttagtctctcaagaa--gaactgactagagactagctagggtctcacaa-tggttta-gacagcatttt-aaaaaCTGTATCACAgtttg i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11269848 164 - 20685099 ttctc---------------tgatact-------tgaccctgg-gctgattccagtggatgcaccgtgacttggagtatgagaacc-aaggagagaagtggttgggatgttggct-----gctcaagaa--gga--aaccgtcttctctccaggatcttagaa-tagtcac-aaaaccatttttaaaaacTCT-----AACTTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112346618 177 - 122678785 ttgtc---------------tggtact-------tggccttggtg-tgattcaggtgggtgtatgatgtttcagtgt-tgagatcccaataagaggggcagttggggtgtagacatagccactcaagaaagggattgattggcctctagctagcacctcaaaactgactcaggaaagcatttt-TTTAA--ATATTACAgtggg i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 524910 1 - 2150887 I a score=1705847.000000 s hg38.chr18_GL383571v1_alt 174296 156 + 198278 ccaggcct-acagttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctgctggcatgaagcctctgttcttcttcacatggaccactccctaaggcggcttgactgtcctcacggtatgacccctgaagttc s panTro5.chr18 65084340 156 + 78221452 ccaggcct-acagttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctgctggcatgaagcctctgttcttcttcacatggaccactccctaaggcggcttgactgtcctcacggtatgacccctgaagttc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64203242 156 + 77229886 ccaggcct-acagttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctgctggcatgaagcctctgttcttcttcacatggaccactccctaaggcggcttgactgtcctcacggtatgacccctgaagttc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5422773 156 + 17472758 ccaggcct-acggttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctgctggcatgaagcctctgttcttcttcacatggaccactccctaaggcggcttgactgtcctcacggtatgacccctgaagtcc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139463292 156 - 152096393 ccaggcct-acagttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctgctggcatgaagcctctgttcttcttcacatggaccactacctaaggcggcttgactgtcctcacggtatgacccctgatgtct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57413004 154 + 70235451 ccaggcct---agttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctggaggcatgaagcctctgttcttcttcacgtggaccaccccctaaggcggcttgagtgtcctcatggtatgacccctgaagtcc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63104322 154 - 75711847 ccaggcct---agttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctggaggcatgaagcctctgttcttcttcacgtggaccaccccctaaggcggcttgagtgtcctcatggtatgacccctgaagtcc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13663651 154 - 18804593 ccaggcct---agttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcaac--------------------------------cagtggctggaggcatgaagcctctgttcttcttcacatggaccaccccctaaggcagcttgagtgtcctcatggtatgacccctgaagtcc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13275480 156 + 18905526 CCAGGCCT-ACAGTTTTCTTAGGTCTTGAGTGGGGTTGAAGCAACTGCTTTCTATAGGGT-------------------TCAAC--------------------------------CAGtggctggaggcatgaagcctctgttcttcttcacatggaccaccccctaaggcggcttgagtgtcctcacggtatgacccctgaagtcc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60104011 156 - 72318688 ccaggcct-acagttttcttaggtcttgagtggggttgaagcaactgctttctatagggt-------------------tcggt--------------------------------cagtggctggaggcatgaagcctctgttcttcttcacatggaccaccccctaaggcggcttgactgtcctcatggtatgacccctgaagtcc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 440821 156 - 1517660 CCAGGCCT-ACAGTTTTCTTAGGTCTTGAGTGGGGTTGAAGCAACTGCTTTCTATAGGGT-------------------TCAAC--------------------------------CAGtggctggaggcatgaagcctctgttcttcttcacatggaccaccccctaaggcggcttgagtgtcctcacggtatgacccctgaagtcc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3536709 156 + 6513552 CCGGGCCT-ACAGTTTTCTTAGGTCTTGAGTGGGGTTGAAGCAACTGCTTTCTATAGCGT-------------------TCAAC--------------------------------CAGtggctggaggcacgaagcctctgttcttcttcacacagaccaccccctaaggcggcttgactgtcctcacggtgtgacccctgaagtcc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105308524 152 + 117903854 ccagggct-aca-ttttcttaggtcttgagtgaggttgaaacaactactttctatagtgc-------------------tcacc--------------------------------caggggctgctggcatgaagcctctg---ttcttcatatggtccacaccataaagtggcttgaatgtcctcacagtatggcccctgaagtcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19495227 152 - 31320352 ccagggct-aca-ttttcttaggtcttgagtgaggttgaaacaactactttctatagagc-------------------tcacc--------------------------------caggggctgctggcatgaagcctctg---ttcttcacatggacgacaccataaggtggtttgactgtcctcacagtatagcccctgaggtcc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1691062 151 + 2203405 ccagggct-aca-ttttcttaggtcttgagtgaggttgaaacaactactttctatagggc-------------------tcacc--------------------------------caggggctgctggcatgaagcctctg---ttcttcacatggaccacaccataaggcggctt-actgtcctcacagcatggcccctgaagtcc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3643448 152 - 14941987 ccaggact-aca-ttttcttaggacttgagtgaggttgaaacaactactttctatagggc-------------------tcacc--------------------------------caggggctgctggcatgaagactctg---ttcttcacatggaccacaccataaggcagcttgactgtcctcacagtatggcccctgaagtcc i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11270012 156 - 20685099 GCATggct-ccagtctccagaggtcttgagtggggctggaagatctgctttcaagaagga-------------------tcaca--------------------------------caatggctgttggcatgaaatcttggttcctcattgcttggacctctccacagagtggcttgatagtgcatacaacatggcagctgaagtcc i otoGar3.GL873546 C 0 I 8 s canFam3.chr1 112346795 186 - 122678785 tcagtgttggcagtcttttgaagacttgaataaggtttaaggggatgctttcaagaaggc-------------------tcatccacatggccattggcatgaagtttcagtccctcactggcggaaggcaagaagtcttagttcctcatcacattgacttctccataaggtgacttgatttacttaacagcatggcagctcaag--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 524911 174 - 2150887 ctggggct-acagtct-ctaagagcttgagtggggttaaaggatctgctttctagaaggctgttggtatgaagctttcattcct--------------------------------cactgactgttagttgaagacttctgttcctcactgtgtggacacctccataaggaggcttgattgtccttacttcatagcagttaacatct i dasNov3.JH575754 I 1 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I a score=4025482.000000 s hg38.chr18_GL383571v1_alt 174452 412 + 198278 tccagaattagcctttc-----------gtgagagagagcgaggaggaagctaca-ttccttcgctggccttgtctcagaagtcacaaccttttacttccacattactctgttcctcagaagcaagacattcagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGTCACTATTCTCTCAAAAAAGAA----TTGGCAAGGATATTTTCTTCCAGATTAGGGTTCAGGTAGTGCTGATTGGAGAGAAG-AAAAAATGTTCAGTTTATTTTT--TATTTATTTTGGTCG---TTACGGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCGATTATCACTTTATAAAACCAggct s panTro5.chr18 65084496 412 + 78221452 tccagaattagcctttc-----------gtgagagagagcgaggaggaagctaca-ttccttcgctggccttgtctcagaagtcacaaccttttacttccatattactctgttcctcagaagcaagacattcagtccagcacacaTATGTTAAGCCACCGCAGCATGATGGGCACTATTCTCTCAAAAAAGAG----TTGGCAAGGATATTTTCTTCCAGATTAGGGTTCAGGTAGTGCTGATTGGAGAGAAG-AAAAAATGTTCAGTTTATTTTT--TATTTATTTTGGTCG---TTACGGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCGATTATCACTATATAAAACCAggct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64203398 412 + 77229886 tccagaattagcctttc-----------gtgagagagagcgaggaggaagctaca-ttccttcgctggccttgtctcagaagtcacaaccttttacttccacattactctgttcctcagaagcaagacattcagtccagcacacaTATGTTAAGCCACCGCAGCATGATGGGCACTATTCTCTCAAAAAAGAG----TTGGCAAGGATATTTTCTTCCAGATTAGGGTTCAGGTAGTGCTGATTGGAGAGAAG-AAAAAATGTTCAGTTTATTTTT--TATTTATTTTGGTCG---TTACGGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCACTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCGATTATCACTATATAAAACCAggct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5422929 413 + 17472758 tccagaattagcctttt-----------gtgagagacagcgaggaggaagctaca-ttcctttgctggccttgtctcggaagtcacatccttttacttccacattactctgttcctcagaagcaagacattcagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTATTCTCTCAAAAAAGAG----TTGGCAAGGATATTTTCTTCCAGATTAGGGTTCAGGTAATGCTGATTGGAGGGAAGAAAAAAATGTTCAATTTATTTTT--TATTTATTTTGGTCG---TTACGGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATTGATTATCACTATATAAAACCAggct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139463448 412 - 152096393 tccagaattagcctttc-----------gagagagagagcgaggaggaagctaca-ttccttcgctggccttgtctcggaagtcacaaccttttacttccacattactctgttccttagaagcaaaacattcagtccaacacacacATGTTAAGCCACCCCATCGTGATGGGCACTATTCTCTCAAAAAAGAG----TTGGCAAGGATTTTTTCTTCCAGATTAGGGTTCAGGTAATGCTGATTGGAGAGAAG-AAAAAATGTTCAATTTATTTTT--TATTTATTTTAGTCA---TTACGGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTAATCATTAGGTAAATTCTAGAATAACATAATCGATTATCACTATATAAAACCAggct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57413158 413 + 70235451 tccagaattagcctttt-----------gaaagagaaagcaaggagaaagctata-ttccttcgctggccttgtctcggaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTATCCTCTCAAAAAAGAG----TTGGCGAAGATATTTTCTTCCAGATTAGGATTCAGATAATGCTGATTGGAGGGAAGAAAAAAATATTCAATTTATTTTT--TATTTATTTTGGTCA---TTACAGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCAATTATCACTATATAAAACAAggct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63104476 413 - 75711847 tccagaattagcctttt-----------gaaagagaaagcaaggagaaagctata-ttccttcgctggccttgtctcggaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTATCCTCTCAAAAAAGAG----TTGGCGAAGATATTTTCTTCCAGATTAGGATTCAGATAATGCTGATTGGAGGGAAGAAAAAAATATTCAATTTATTTTT--TATTTATTTTGGTCA---TTACAGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCAATTATCACTATATAAAACCGggct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13663805 413 - 18804593 tccagaattagcctttt-----------gaaagagaaagcaaggagaaagctata-ttccttcgctggccttgtctcggaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTATCCTCTCAAAAAAGAG----TTGGCGAAGATATTTTCTTCCAGATTAGGATTCAGATAATGCTGATTGGAGGGAAGAAAAAAATATTCAATTTATTTTT--TATTTATTTTGGTCA---TTACGGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCAATTATCACTATATAAAACCGggct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13275636 413 + 18905526 tccttaattagcctttt-----------gaaagagaaagcaaggagaaagctata-ttccttcgctggccttgtctcggaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTATCCTCTCAAAAAAGAG----TTGGCGAAGATATTTTCTTCCAGATTAGGATTCAGATAATGCTGATTGGAGGGAAGAAAAAAATATTCAATTTATTTTT--TATTTATTTTGGTCG---TTACAGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTCCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCAATTATCACTATATAAAGCCGggct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60104167 411 - 72318688 tccggaattagcctttt-----------ggaagagaaagcaaggagaaagcgata-ttccctcactggccttgtctggaaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacac--GTGTTAAGCCACACCAGCATGATGGGCACTATTCTCTCAAAAAAGAG----TTGGCGAAGATATTTTCTTCCAGATTAGGATTCAGATAATGCTGATTAGAGGGAAGAAAAAAATGTTCAATTTATTTTT--TATTTATTTTGGTCG---TTACAGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCGATTATCACTGTATAAAACTGggct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 440977 413 - 1517660 tccagaattagcctttt-----------gaaagagaaagcaaggagaaagctata-ttccttcgctggccttgtctcggaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTATCCTCTCAAAAAAGAG----TTGGCGAAGATATTTTCTTCCAGATTAGGATTCAGATAATGCTGATTGGAGGGAAGAAAAAAATATTCAATTTATTTTT--TATTTATTTTGGTCA---TTACAGTTTCATTATTTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCAATTATCACTATATAAAACCGggct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3536865 412 + 6513552 tccggaattagcgtttt-----------gaaagagaaagcaaggagaaagctata-ttccttcgctggccttgtctcagaggtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccagcacacaTATGTTAAGCCACCCCAGCATGATGGGCACTCT-CTCTCAAAAAAGAG----TTGGCAAGGATATTATCTTCCAGAGTAGGATTCAGATAATGCTGATTGGAGAGAAGAAAAAAATGTTCAATTTATTTTT--TATTTATTTTGGTCA---TTACAGTTTCATTATTTTTTGGTATTAAAA-AGTTATGGTTGAAGAAAACAAAGGTCATTTCTTTTCATTAATTTCCTATGTGATCATTAGGTAAATTCTAGAATAACATAATCGATTATCATTGTATAAAACTGggct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105308676 424 + 117903854 tccagagttagcctttca---agagagagagagagagagcaaggaggaaactaca-ttcctttcctggccttgtctctgaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccaggacacctaagTTAAGCCACCTCAGCATGATGAGCACTAGTCTTGCAAAAAAAAAAAG-ACAGCAAGAACATTTTCTTTGAGATTAGGATTCAAGTAATGCTGATTGGAG-GAAG-AACAAATGTTTGATTTATTTTT--CATTTATTTTTGTCATTATTACATTTCCATTA-TTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGGAGTTTCTTTTCATTAATTTCCTATGTGATCATTAGACAAATTCTAAAATAACATTATAGATTATCAATATATCAAAACAGCct i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19495379 420 - 31320352 tccagagttagcctttc--------agagagagagagagcaaggaggaaactaca-ttccttcgctggccttgtctctgaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccaggacacctaagTTAAGCCACCTCAGCATGATGAGCATTAGTCTTTCAAAAAAAAAAAACATAGCAAGAACATTTTCTTCCAGATTAGGATTCAAGTAATGCTTATTGGAG-GAAG-AACAAATGTTGGATTTATTTTT--CATTTATTTTGGTCATTATTACACTTCCATTA-TTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGCAGTTTCTTTTCATTAATTTCCTATGTGATCATTAGGCAAATTCTAAAATAACATTATGGATTATCACTATATCAAAACAGCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1691213 418 + 2203405 tccagagttagcctttca-------agagggagagagagcaaggaggaaactatg-ttccttcattggccttgtctctgaagtcacaaccttttacttccacattactctgttcctcagaagcaagatatttagtccagGACATCTAAGCTAAGCCACCTCAGCATGGTGAGCACTAGTCTTTCAAAAAATAAG---ATAGCAAGAACATTTTCTTCCAGATTAGGATTCAAGTAATGCTGATTGGAG-GAAG-AACAAATGTTTGATTTATTTTT--CATTTATTTTGGTCGTTATTACGTTTCCATTA-TTTTTGACATTAAAA-AGTCATGGTTAAAGAAAACAAAGGCAGTTTCTTTTCATTAATTTCCTATGTGATCATTAGGCAAATTCTAAAATAACATTATGGATTATCACTATATCAAAACAGCct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3643600 417 - 14941987 tccagagttagcctttcg---ag--agagagagagagagaaaggaggaaactaca-ttcctttgctggccttgtctctgaagtcacaaccttttacttccacattactctgttcctcagaagcaagacatttagtccaggacacctaagTTAAGCCATCTCAGCATGATGAGCACTAGTCT--CAAAAAAAAAG---ATAGCAAGAACATTTTCTTCCAGATTAGGATTCAAGTAATGCTGATTGGAG-GAAG-AACAAATGTTTGATTTATTTTT--CCTTTATTTTGGTCATTATTACGTTTCCATTA-TTTTTGATATTAAAA-AGTCATGGTTGAAGAAAACAAAGGCAGTTTCTTTTCATTAATTTCCTATGTGA-CATTAGGCAAATTCTAAAATAACATTTTAGATTATCACTAAATCAAAACAGCct i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112346981 216 - 122678785 tcaggagtgagtc---------------aagagtgagag-gagaaaggaaTTATG-T-----------------------------------------------------------------------GTTTGGTC-------------------------------------------------------AG----T----------------------ATTACGATTCC-----------------------------------ATTTATTTTTTGTGTTTGTTTTAGGGG---TT----TTTTTTTCTTTAGTAATATT--AA-AGTCATGGTTGCAG-AAATAAAGGTCATTTCTTCCCATGATTTTGTTATGTGGTCA-AAAGTAAACTCTAGAAGAACACTATGGCTTGACATTATATCAAAACAG--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 525085 407 - 2150887 accagag--agacatctatacagagagagagactgagagcaaggtaaaagccacacttccttttatgacctagtttaggaagttgctaacatttccttc----tcatactactcattggaagtaagtctttcagtccagctcacaTATTTTAATCCTCCCCAGCTTGATCAGCATTGTTCTCTCCAAAAACAG----GTAACTAGGATCTTTTCT--CAGATTATGGTTAAGGCAAAGCTGACAAGAGGGAAA-AATAAATGGTCAGT----------TTTGTAGTTTGGTTGGTATTAAGATTTCCTTTTATTTTGTTACAAAAACAGTCAAAGTTGCAGAAAAGAAAGGTAATTTCT-----CAACTTTTCTATGTGATCAAAAGATGAGATCTAGGACAATACCAGGAATTGTTATTATATCAAAGCAGTCT i dasNov3.JH575754 C 0 I 217 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e otoGar3.GL873546 11270168 8 - 20685099 I a score=1044619.000000 s hg38.chr18_GL383571v1_alt 174864 119 + 198278 gggtg-tagtggctcacacctgtaatca---cattttaggaggccaaggagggcagatcatacgaggtaaggcatttgaggcccacctgagcaatgtggtgaaacgttgtctctattaaaaat s panTro5.chr18 65084908 119 + 78221452 gggtg-tagtggctcacacctgtaatca---cattttaggaggccaaggagggcagatcatacgaggtaaggcatttgaggcccacctgagcaatgtggtgaaacgttgtctctattaaaaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64203810 119 + 77229886 gggtg-tagtggctcacacctgtaatca---cattttaggaggccaaggagggcagatcatacgaggtaaggcatttgaggcccacctgagcaatgtggtgaaacgttgtctctattaaaaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5423342 119 + 17472758 gggtg-tagtggctcacacctgtaatca---cattttaggaggccaaggagggcagatcatatgaggtaaggcatttgaggcccacctgaccaacgtggtgaaacgttgtctctattaaaaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139463860 119 - 152096393 gggtg-tagtggctcacacctgtaatca---cattttaggaggccaaggagggcagatcatacgaggtaaggcatttgaggcccgcctgaccaacgtggcgaaaccctgtctctattaaaaat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57413571 122 + 70235451 gggtg-tagtggctcacacctgtaatcaccgcattttgggaggccaagaaaggcagatcatatgaggtaaggcatttgaggcctgcctgaccaacgtggcaaaaccctgtctctattaaaaat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63104889 122 - 75711847 gggtg-tagtggctcacacctgtaatcaccgcattttgggaggccaagaaaggcagatcatatgaggtaaggcatttgaggcctgcctgaccaacgtggcaaaaccctgtctctattaaaaat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13664218 122 - 18804593 gggtg-tagtggctcacacctgtaatcaccgcattttgggaggccaagaaaggcagatcatatgaggtaaggcatttgaggcctgcctgaccaacgtggcaaaaccctgtctctatttaaaat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276049 122 + 18905526 gggtg-tagtggctcacacctgtaatcaccgcattttgggaggccaagaaaggcagatcatatgaggtaaggcatttgaggcctgcctgaccaacgtggcaaaaccctgtctctattaaaaat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60104578 122 - 72318688 gggtg-tagtggcttacacctgtaattgccgcgttttgggaggccaagaaaggcagattatatgaggtaaggcatttgaggcctgcttgaccaacgtggcgaaactctgtctctattaaaaat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 441390 122 - 1517660 gggtg-tagtggctcacacctgtaatcaccgcattttgggaggccaagaaaggcagatcatatgaggtaaggcatttgaggcctgcctgaccaacgtggcaaaaccctgtctctattaaaaat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3537277 122 + 6513552 gggtg-tagtggctcacacctgtaattaccgcattttgggaggccaagaaaggcagatcatatgaggtaaggcatttgaggcttgcctgaccaacgtggcgaaaccctgtctctattaaacat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309100 122 + 117903854 gagca-tagtggctcacccctgtaatcacagcattttgggaggccaaggcaggcagatcatctgaggtcaggagtcggaaaccagcttaaccaatgtggcaaaaccttgtctctattacaaat i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19495799 123 - 31320352 GGGCATTAgtggctcacccctgtaatcatagcattttgggaggccaaggcgggcagatcatctgaggtcaggagtctgaaaccagcctaaccaatgtggcaaaaccttgtctctattataaat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1691631 122 + 2203405 gggca-tagtggctcacccctgtaatcgtagcgttttgggaggccaaggcgggcagatcatctgaggtcaggagtctgaaaccagcctaaccaatgtggcaaaacattgtctctattataaat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644017 122 - 14941987 gggca-tagtggctcactcctgtaatcacagcattttgggaggccaaggcgggcagatcatctgaggtcaggagtctgaaaccagcctaaccaatgtagcaaaaccttgtctctattataaat i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112347197 12 - 122678785 ------T------------------------CAT---------------------------------------------------------------------------------TCAAAAAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 525492 217 - 2150887 I e otoGar3.GL873546 11270168 8 - 20685099 I a score=1611918.000000 s hg38.chr18_GL383571v1_alt 174983 163 + 198278 ac--aaaaactatctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttgaacctgggaagtgaaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacggagggagattctgtctga--aaataa s panTro5.chr18 65085027 163 + 78221452 ac--aaaaactatctgggtgtggtggcgtgtgcctgtaatctcagctacttgggaggttgaggaaggagaatcacttgaacctgggaagtggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacggagcgagattctgtctga--aaataa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64203929 163 + 77229886 ac--aaaaactatctgggtgtggtggcgtgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttgaacctgggaagtggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacggagcgagattctgtctga--aaataa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5423461 163 + 17472758 ac--aaaaactatctgggtatggtggcatgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttgaacctgggaagtggaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacggagtgagattctgtctga--aaataa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139463979 163 - 152096393 ac--aaaaactatctgggtgtggtggcgtgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttgaacctgggaagtggaggttgcagtgagctgagatcatgccactacactccagcctgggcaatggagcgagattctgtctga--aaataa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57413693 163 + 70235451 ac--aaaaactacctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttaaacctgggaagtggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgatggagtgagatttcatctga--aaataa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105011 163 - 75711847 ac--aaaaactacctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttaaacctgggaagcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgatggagtgagatttcatctga--aaataa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13664340 163 - 18804593 ac--aaaaactacctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttaaacctgggaagcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgatggagtgagatttcatctga--aaataa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276171 163 + 18905526 ac--aaaaactacctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcacttaaacctgggaagaggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgatggagtgagatttcatctga--aaataa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60104700 163 - 72318688 ac--aaaaactacctgggtgtggtggtgtgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcgcttaaacctgggaagcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgatggagtgagattccgtctga--aaataa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 441512 163 - 1517660 ac--aaaaactacctgggtgtggtggcatgtgcctgtaatcccagctacttgggaggctgaggaaggagaatcacttaaacctgggaagcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgatggagtgagatttcatctga--aaataa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3537399 163 + 6513552 ac--gaaaactacctgggtgtggtggcgtgtgcctgtaatcccagctacttgggaggttgaggaaggagaatcgcttaaacctgggaagcagaggttgcagtgagctgagatcatgccactgcactccagcctgggcaatggagtgagattccgtctga--aaataa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309222 165 + 117903854 ac--aaaaactagccaggtgtggtggtgtgttcctataaacccagctacttggaaggctgaggaaggagaaactcttgaacctgggaagtggaggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagtgagactctatcttaataaataa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19495922 166 - 31320352 ac-aaaaaactagccaggtgtggtggtgtgttcttataaacccagctacttgggaggctgaggaaggagaaattgttgaacctgggaagtggaggttgcagtgagctgagatcatgcctctgcactccagtctgggcaacagagtgagactcaatatcaaTACATAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1691753 167 + 2203405 acaaaaaaactagccgggtgtggtggtgtgttcctataaacccagctacttgggaggctgaggaaggagaaactcttgaacctgggaagtggaggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagtgagactctatctcaataaataa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644139 165 - 14941987 ac--aaaaactagccaggtgtggtggtgtgttcctgtaaacccagctacttgggaggctgaggaaggagaaactcttgaacctgggaagtggaggttgcaatgagctgagattatgccactgcactccagcctgggcaacagagtgagactctatctcaataaataa i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 525492 217 - 2150887 I e canFam3.chr1 112347209 0 - 122678785 C e otoGar3.GL873546 11270168 8 - 20685099 I a score=94700.000000 s hg38.chr18_GL383571v1_alt 175146 16 + 198278 ata----aaTTAAATAATCA s panTro5.chr18 65085190 15 + 78221452 ata----aaTTAAA-AATCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204092 15 + 77229886 ata----aaTTAAA-AATCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5423624 16 + 17472758 ata----aaTTAATTAATCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464142 16 - 152096393 ata----aaTTAATTAATCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57413856 16 + 70235451 ata----aaTTAATTAATCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105174 16 - 75711847 ata----aaTTAATTAATCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13664503 16 - 18804593 ata----aaTTAATTAATCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276334 16 + 18905526 ata----aaTTAATTAATCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60104863 16 - 72318688 ata----aaTTAATTAATCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 441675 12 - 1517660 ata--------aaTTAATCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3537562 16 + 6513552 ata----aaTTAATTAATCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309387 16 + 117903854 aca----aatgaataaataa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496088 16 - 31320352 ATA----AATCAATAAATAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1691920 12 + 2203405 ata--------aataaaTAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644304 20 - 14941987 ataaataaataaataaataa i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112347209 16 - 122678785 ATA----CGTAAAATGATTT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 525492 217 - 2150887 I e otoGar3.GL873546 11270168 8 - 20685099 I a score=3632580.000000 s hg38.chr18_GL383571v1_alt 175162 366 + 198278 TCCATGTAATAA------AACATTATGGAAAAATATGTAGTTAAACATATTTTTATGTTTATTCattcatttattcagca-----gattttattacagttcctagtatgtgccaatctcagtggttagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggtgtagtgcag--gaa-aaagttccattgacatattgacacta----------------------atatatatatataaataaaagctgtgttaaagtg-aaaaaaa---attatgctactttatg---gtagacaggaaacgtggaggaatagttagagaaggcttgttggagaaagtggcaatttgTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac s panTro5.chr18 65085205 362 + 78221452 TCCATGTAATAA------AACATTATGGAAGAATATGTAGTTAAACATATTTTTATGTTTATTCattcatttattcagca-----gattttattacagttcctagtatgtgccaatctcagtggttagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagttcatggtgtagtgcag--gaa-aaagttccattgacatattgacacta----------------------atatatatatataaataaaagctgtgttaaagtg-aaaaaaa---attatactactttatg---gtagacaggaaacgtggaggaa----tagagaaggcttgttggagaaagtggcaattggtccttgag-------ctaaactgtgg---------gaaggggttga-aaaaac i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204107 368 + 77229886 TCCATGTAATAA------AACATTATGGAAGAATATGTAGTTAAACATATTTTTATGTTTATTCattcatttattcagca-----gattttattacagttcctagtatgtgccaatctcagtggttagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagttcatggtgtagtgcag--gaa-aaagttccattgacatattgacacta--------------------atatatatatatataaataaaagctgtgctaaagtg-aaaaaaa---attatactactttatg---gtagacaggaaacgtggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5423640 388 + 17472758 TCCATGTAATAA------AACATTATGGAAAAATATGTAGTTAAACATATTTTTATGTTTATTCattcatttattcaaca-----gattttattacagttcctagtatgtgccaatctcagtggttagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggtgtagtgcag--gaa-aaagttccattgacatattgacactaatatatatatatatatatatatatatatatatgtaaataaaagctgtgttaaagtg-aaaaaaa---attatactactttatg---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattggtccttgag-------ctaaactgtgg---------gaaggggttga-aaaaac i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464158 365 - 152096393 TCCATGTAATAA------AACATTATGGAAAAATATGTAGTTAAACATATTTTTATGTTTATTCGttcatttattcaaca-----gattttattacagttcctagtatgtgccaaactcagtggttagcaatgggtatacaatagtaaa---aagaatagggttgcagctctcattgagtttatggtgtagtgcag--gaa-aaagtgctattgacatattgacacta--------------------atatatatatgtataaataaaagctgtgttaaagtg-aaaaaaa---attatactactttatg---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcGATTGGTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57413872 365 + 70235451 GCCATGTAATAA------AACAATATGCAAAATTATGTAGTTAAACATATTTTTATATTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagtaccattgacatattgacacta------------------------atatatatataaataaaagctgtgttaaaatgaaaaaaaa---attatactactttata---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105190 365 - 75711847 GCCATGTAATAA------AACAATATGCAAAATTATGTAGTTAAACATATTTTTATATTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagttccattgacatattgacacta------------------------atatatatataaataaaagctgtgttaaaatgaaaaaaaa---attatactactttata---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattggtccttgag-------ctaaactgtgg---------gaaggggttga-aaaaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13664519 365 - 18804593 GCCATGTAATAA------AACAATATGCAAAATTATGTAGTTAAACATATTTTTATATTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagttccattgacatattgacacta------------------------atatatatataaataaaagctgtgttaaaatgaaaaaaaa---attatactactttata---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276350 364 + 18905526 GCCATGTAATAA------AACAATATGCAAAATTATGTAGGTAAACATATTTTTATATTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagttccattgacatattgacacta------------------------atatatatataaataaaagctgtgttaaaatg-aaaaaaa---attatactactttata---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCCTTGAG-------CTAAATTGTGG---------GAAGGGGTtga-aaaaac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60104879 365 - 72318688 TCCATGTAATAA------AACAATATGCAAAATTATGTAGTTAAACATATTTTTATGTTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtgtacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagttccattgacatattgacacta------------------------atatatatataaataaaagctgtgttaaagtgaaaaaaaa---attatactactttata---gtagacaggaaatatggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 441687 364 - 1517660 GCCATGTAATAA------AACAATATGCAAAATTATGTAGTTAAACATATTTTTATATTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagttctattgacatattgacacta------------------------atatatagataaataaaagctgtgttaaaatg-aaaaaaa---attatactactttata---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCCTTGAG-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3537578 363 + 6513552 TCCACATAATGA------AACAATATGCAAAATTATGTAGTTAAACATATTTTTATGTTTATTCattcatttattcaaca-----ggttttattacagttcctagtatgtggcaatctcagtggtaagcaatgggtatacaatagtaaaaagaagaacagggttgcagctctcattgagtttatggcgtagtgcag--gaa-aaagttacattgacatattgacacta------------------------atatatatataaataaaagctgtgttaaagtg--aaaaaa---attatactactttata---gtagacaggaaatgtggaggaatagttagagaaggcttgttggagaaagtggcaattgGTCTTTGAA-------CTAAACTGTGG---------GAAGGGGTtga-aaaaac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309403 359 + 117903854 TCCATGTAATAA------AACGATATGCAAAATTATGTAGCTAAACACATTTTTGTGTTTATTCatttgtttattccaca-----gattttattacagttcttagtatgtgccagtctcagtagttagcaatcggtatacgatagtgaaaaaaagaacatagttgtggttctcattgactttgtggcttagtacaa--gaa-aaaagtac-------tattgacacta------------------------atacgtatataaataaaagatgtGTTAAAGTG-AAAAAAATATTTTATCCTACTGTACA----TAGACAGGCAGTGTGGAGGAATAGTTAGAGAAGCCTTGTTGGAGAAAGTGGCAATTGTTCCTTAAG-------CTAAACTGTGG---------GAAGGAGTTGG-AAAAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496104 360 - 31320352 TCCATGTTACAA------AACAATATGCAAAATTATGTAGTTAAACACATTTTTGTGTTTATTCATTTGTTTATTCCACA-----GATTGTATTACAGTTCTGAGTACGTGCCAATCTGAGTAGTTAGCAATGGGTATAAAATAGTGAAATAAAGAACATGGTTGTAGTTCTTATGGACTTTGTGCCTTAGTACAA--GAA-AAACGTTC-------TATTGACACTA------------------------AAACATATATAAATAAAAGATGTGTTAAAGTG-AAAAAAATATTTTATACTGTTTTACA----TAGACAGGCAGTGTGGAGGCATAGTTAGAGAAGCCTTGTTGGAGAAAGTGGCAATTGTTCCTTGAG-------CTAAACTGTGG---------GAAGGGCTTGGAAAAaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1691932 359 + 2203405 TCCATGTAATAA------AACAATATGCAAAATTATGTAGCTAAACACATTTTTGTGTTTATTCatttgtttattcaaca-----gattttactacagttcttagtacgtgccagtctcagtagttagccatgggtatacgataatgaaaaaaagaacatggttatagttctcattgactttgtggcttaatacaa--gaa-aaaagttc-------tattgacacta------------------------atacatatataaataaaagatgtGTTAAAGTG-AAAAAAATATTTTATACTGCTTTACA----TAGACAGGCAGTGTGGAGGCATAGTTAGAGAAGCCTTGTTAGAGAAAGTGGCAATTGTTCCTTGAG-------CTAAACTGTGG---------GAAGGAGTTGg-aaaaca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644324 360 - 14941987 TCCATGTAATAA------AACAATATGCAAAATTATATAGCTAAACACATTTTTGTGTTTATTCatttgtttattcaaca-----gattttattacagttcttagtatgtgccaatctcagtagttagcaaagggtatacaatagtgaacaaaagaatatggttgtagttctcattgactttgtggcttagtacaa--gaa-aaaagttc-------tattgacacta------------------------atacatatataaataaaagatgtGTTAAAGTG-AAAAAAATATTTTATACTACTTTACA----TAGACAGGCAGTATGGAGGAATAGTTACAGAAGCCTTGTTGGAGAAAGTGGCAATTGTTCCTTGAG-------CTAAACTGTGG---------GAAGGAGTTGGAAAAaaa i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11270176 374 - 20685099 TCCATTAAATCATCCATTAAAAATATGTGAAAT--TGGGGCTCAGCGCA-TTTCATGTTAattcattccattctccaataaacataacattattagaggtctcatcatatgccgagctctgcgattaaca------tcacaatagtaac---aagaacctggccccaattctcatggagtttatcctctagtttag--gaacaaagttccacagacagagtcacacta------------------------atacatacataattaaaaactgaattgcagtg-aaaaaaa---attgcctaacacaatgaaagtagacaggaagtgtggaggaattgttagaggaagctacctgttgagggtgg-aattgatctttgag-------ctaaaatctgaaCAAGCTGTAAAGGGATTGG-GAATA- i otoGar3.GL873546 I 8 C 0 s canFam3.chr1 112347225 343 - 122678785 --------------------------------------TCCCAAGTACATTTTCATGTTTAGTCatttatttattcaaca-----agtactaatagggttcttgtcatatgccaaggcctgtggtaagca-ttggtacataataggaagaagagagatgtggtcctaattgtcattgagttaa-attctagtgtaggagaa-aaagttccaataaaatattaggac-a------------------------atgtgtataaaacttaaaactgaattataatg-agacatt---tgcatggtactgtgga--agtggacaaagaatacagaacaatagttacagaagtctttttagagaaaatggcaattactctttgagcaggaatctgaacaatgg----gCTGTGAAGGCAGtga-ggaaa- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1296755 1171 - 1406956 I e dasNov3.JH575754 525492 217 - 2150887 I a score=520339.000000 s hg38.chr18_GL383571v1_alt 175528 42 + 198278 tcagaccttccataatccattgaactttatatcatattttct s panTro5.chr18 65085567 42 + 78221452 tcagaccttccataatccattgaactttatatcatattttct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204475 42 + 77229886 tcagaccttccataatccattgaactttatatcatattttct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424028 42 + 17472758 tcagaccttccataatccattgaactttatatcatattttct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464523 42 - 152096393 tcagaccttccataatccattgaactttatatcatatcttct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414237 42 + 70235451 tcagaccttccgtaatccattgaactttacatcatattttct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105555 42 - 75711847 tcagaccttccgtaatccattgaactttacatcatattttct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13664884 42 - 18804593 tcagaccttccgtaatccattgaactttatatcatattttct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276714 42 + 18905526 tcagaccttccgtaatccattgaactttatatcatattttct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105244 42 - 72318688 tcagaccttccataatcctttgaactttatatcatattttct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442051 42 - 1517660 tcagaccttccgtaatacattgaactttatatcatattttct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3537941 42 + 6513552 tcagaccttccataatccattgaactttatatcatattttct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309762 42 + 117903854 TCAGGCCTTCCATAATCTATTGACCTTTAGATCACATTTTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496464 42 - 31320352 tcaggccttccatgatctattgaactttggaccgtgttttct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692291 41 + 2203405 tcaggctttccgtaatctattgaactttagat-atattttct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644684 42 - 14941987 tcaggccttccataatctattgaactttagatcatattttct i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1297926 42 - 1406956 tcagaccctttataatcaattgaactttgtatcatttattct i proCoq1.NW_012148742v1 I 1171 C 0 s otoGar3.GL873546 11270550 42 - 20685099 TCAGACCCTCTATAATCCATTGAAGTTTATACTATTCATTTA i otoGar3.GL873546 C 0 I 123 s canFam3.chr1 112347568 41 - 122678785 tcagacca-ccataatcgattgaacttgacatcatatatttt i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 525492 217 - 2150887 I a score=1519449.000000 s hg38.chr18_GL383571v1_alt 175570 126 + 198278 aaaagttaagcaatttcaacttacaaagagattctca-------atgttttgctacctcaggcaaataatgttatccttttaaacatctttaata--ttttaatcccctgtctcattaat-------ag-ccttttttataaa s panTro5.chr18 65085609 126 + 78221452 aaaagttaagcaatttcaacttacaaagagattctca-------atgttttgctacctcaggcaaataatgttatccttttaaacatcttaaata--ttttaatcccctgtctcattaat-------ag-ccttttttataaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204517 126 + 77229886 aaaagttaagcaatttcaacttacaaagagattctca-------atgttttgctacctcaggcaaataatgttatccttttaaacatcttaaata--ttttaatcccctgtctcattaat-------ag-ccttttttataaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424070 124 + 17472758 agaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaataatgttatccttttaaacatctttaata--ttttaatccc--atctcattaat-------ag-ccttttttataaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464565 126 - 152096393 gaaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaataatgttatccgtttaaatatctttaata--ttttaatcccctgtctcattaat-------ag-ccttttttataaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414279 126 + 70235451 aaaagttaagcaattttaacttacaaagtgattctga-------atgttttgctacctcaggcaaataatgttatccttttaaatattgttaata--ttttaatcccctgtctcattaat-------ag-cctttttaaaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105597 126 - 75711847 aaaagttaagcaattttaacttacaaagtgattctga-------atgttttgctacctcaggcaaataatgttatccttttaaatattgttaata--ttttaatcccctgtctcattaat-------ag-cctttttaaaaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13664926 126 - 18804593 aaaagttaagcaattttaacttacaaagtgattctga-------atgttttgctacctcaggcaaataatgttatccttttaaatattgttaata--ttttaatcccctgtctcattaat-------ag-ccttttttaaaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276756 126 + 18905526 aaaagttaagcaattttaacttacaaagtgattctga-------atgttttgctacctcaggcaaataatgttatccttttaaatattgttaata--ttttaatcccctgtctcattaat-------ag-cctttttaaaaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105286 126 - 72318688 aaaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaataatgatatccttttaaatatcgttaata--ttttaatcccctgtctcattaat-------ag-ccttttttataaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442093 126 - 1517660 aaaagttaagcaattttaacttataaagtgattctga-------atgttttgctacctcaggcaaataatgttatccttttaaatattgttaata--ttttaatcccctgtctcattaat-------ag-ccctttttaaaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3537983 126 + 6513552 aaaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaataatgttatccttttaaatattgttaata--ttttaatcccctgtctcattaat-------ag-tcttttatataaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309804 125 + 117903854 TAAAGTTAAGCAATTTCAACTTGCAAAGAGATTCTGA-------ATGTTTTGCTACCTCAGGAAAATATTGTTATCCTTTTAAATGCCTTTAAT---TTTTAATCCCCTGTCTCATTAAT-------AG-CCTTTTTTATAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496506 126 - 31320352 aaaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaatattgttatccttttaaatgcctttaat---ttttaatcccccgcttcattaat-------agtctttttttataaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692332 125 + 2203405 aaaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaatattgttatccttttaaatgcctttaat---ttttaatcccttgtctcattaat-------ag-tcttttttataaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644726 125 - 14941987 aaaagttaagcaatttcaacttacaaagagattctga-------atgttttgctacctcaggcaaatattgttatccttttaaatgcctttaat---ttttaatcctctgtctcattaat-------ag-tcttttttataaa i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1297968 127 - 1406956 aaatactaagcaatcttgacttacaaatagatgatca-------atgttttactacttctggaaaatattttcatccttttaaatatcttcaatattttttactcccctatctccttaat-------gg-ccttttc-ataaa i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11270715 126 - 20685099 aaaaattaaa-aatcttaacttataaagaggtgatca-------acgttttattacttctggaaaatattttcatccttttaaatatcttcaatattttttactccactgtctcattcat-------gg-ccttttt-ataaa i otoGar3.GL873546 I 123 C 0 s canFam3.chr1 112347609 140 - 122678785 aaaaagtaagtaatctcaactaaccaagagatcttcagtggtttatggtttactatctcagacaaataatattattcttcagaagatcttcaata--ttttactcccTCATCTCATTTATTTTTTAAAT-TTTTGtttttaaa i canFam3.chr1 C 0 I 170 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 525492 217 - 2150887 I a score=652239.000000 s hg38.chr18_GL383571v1_alt 175696 55 + 198278 tgtgaatattttgctggacaaatatcgtggcctctttcaatatatgttatcagaa s panTro5.chr18 65085735 55 + 78221452 tgtgaatattttgctggacaaatatcgtggcctctttcaatatatgttatcagaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204643 55 + 77229886 tgtgaatattttgctggacaaatatcgtggcctctttcaatatatgttatcagaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424194 55 + 17472758 tgtgaatattttgctggacaaatatcgtggcctctttcaatatatgttatcagaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464691 55 - 152096393 tgtgaatattttgctggacaaatatcatggcctctttcagtatatgttatcagaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414405 55 + 70235451 tgtgaatattttgctggacaaatattgtggcctctttcaatatatgttatcagaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105723 55 - 75711847 tgtgaatattttgctggacaaatattgtggcctctttcaatatatgttatcagaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665052 55 - 18804593 tgtgaatattttgctggacaaatattgtggcctctttcaatatatgttatcagaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276882 55 + 18905526 tgtgaatattttgctggacaactattgtggcctctttcaatatatgttatcagaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105412 55 - 72318688 tgtgaatattttgctggacaaatattgtggcctctttcaatatatgttatcagaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442219 55 - 1517660 tgtgaatattttgctggacaaatattgtggcctctttcaatatatgttatcagaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538109 55 + 6513552 tgtgcatattttgctggacaaatattgtggcctctttcaatatacgttatcagaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309929 55 + 117903854 TGTGAATACTGTTCTGGACAAATATGATGGCCTCTTTCAATATATGTTATCAGAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496632 55 - 31320352 tgtgaatattgttctggacaaatacaatggcctctttcaatatatgttatcagac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692457 55 + 2203405 tgtgaacattgttctggacaaatatgatggcatctttcaatatatgttatcagac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644851 55 - 14941987 tgtgaatattgttctggacaaatatgatggcctccttcaatatatgttatcagac i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298095 55 - 1406956 tgcaaatattttcctggactaatactgtggcttctttcaatatatgttaccaaaa i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11270841 53 - 20685099 tgttactattttactgggcaaatatcatggcttctttcagtgtacctt--cagaa i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 525492 217 - 2150887 I e canFam3.chr1 112347749 170 - 122678785 I a score=1469273.000000 s hg38.chr18_GL383571v1_alt 175751 129 + 198278 attctat-aaaataattattttgacatttactagcttataatcacaaggtccatttctcccaccgtcagtgag-tttgtggaa--agacactattgcttcctgagagtcatggggtgccatcttccctagtgg s panTro5.chr18 65085790 129 + 78221452 attctat-aaaataattattttgatatttactagcttataatcacaaggtccatttctcccactgtcagtgag-tttgtggaa--agacactattgcttcctgagagtcatggggtgccatcttccctattgg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204698 129 + 77229886 attctat-aaaataattattttgatatttactagcttataatcacaaggtccatttctcccactgtcagtgag-tttgtggaa--agacactattgcttcctgagagtcatggggtgccatcttccctactgg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424249 129 + 17472758 attctat-aaaataattattttgacatctactagcttataaacacaaggtccatttctcccaccgtcagtgag-tttgtggaa--agacactgttgcttcctgagagtcatggggtgccatcttccctactgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464746 129 - 152096393 attctat-aaagtaattattttgacatttactagcttataatcacaaggtccatttctcccactgtcagtgag-tttgtggaa--agacactattgcttcctgagagtcatggggtgccatcttccctactgg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414460 129 + 70235451 gttctat-aaaataattagtttgacatttactagcttataatcacaaggtccatttctcccaccctcagtgag-tttgtggaa--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105778 129 - 75711847 gttctat-aaaataattagtttgacatttactagcttataatcacaaggtccatttctcccaccctcagtgag-tttgtggaa--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665107 129 - 18804593 gttctat-aaaataattagtttgacatttactagcttataatcacaaggtccatttctcccaccctcagtgag-tttgtggaa--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13276937 129 + 18905526 gttctat-aaaataattagtttgacatttactagcttataattacaaggtccatttctcccaccctcagtgag-tttgtggaa--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105467 129 - 72318688 gttctat-aaaataattagtttgacatttactagcttataatcacaagagccatttctcccatcctcagtgag-tttgtggaa--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442274 129 - 1517660 gttctat-aaaataattagtttgacatttactagcttataatcacaaggtccatttctcccaccctcagtgag-tttgtggaa--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538164 129 + 6513552 gttctat-aaaataattagtttgacatttacgagcttataatcacaaggtctatttctcccaccctcagtgag-tttgtggag--tgacactattgcctcctgagagtcatgggttgccaccttccctactgg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105309984 129 + 117903854 CTCCTAT-AACATAAGT-TTTTAACATCTACTAGCTTATAATCACAAGGTGCATTTCTCCCACCCTCAGTGAGCTTTGTGGAA--CGACACTATTGCTTCCTGAGAGTCATGGGGTGCCATCTTCCCTACTGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496687 130 - 31320352 ctcctat-aacataattattttaacatttactagcttataatcacaaggtccacttctcccaccctcaatgagctttgtggaa--tgacagtattgctttctgagagtcatggggtgccatcttccctacagg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692512 130 + 2203405 ctcctat-aacataattattttaacatttactagcttataatcacaaggtccatttctcccaccctcaatgagctttgtggaa--tgacactattgctttctgagagtcatggggtaccatcttccctactgg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3644906 130 - 14941987 ctcctat-aacataattattttaacatttactagcttataatcacaaggtctatttctcccaccctcaatgagctttgtggaa--tgacactattgcttcctgagagtcgtggggtaccatcttccctactgg i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298150 131 - 1406956 tttctgtaaaaataaccattttgaaaatcactggcttacaaccacaaagttctttttccccaaccccactgagctttgcagaa--cctcacttttgcttcctgagagccatggggtgtgaccttctctattag i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11270894 130 - 20685099 tttctat-aaaataaccatgtaaagagctactagcttacaatgacaaggtccttttcccctgactcccctgagctttgcagaa--cctcatttttggtccgtgatagccatggggtgtgaccatctctactag i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112347919 128 - 122678785 ATCCCAT-TTATAAGTTTTTTATAAATCTAAAGGTTTTAGGTGACAAATTCCATGGCTTT---TTTCAATATA-CTATCAAAATTtctcacttttgcttcctgaatattatggagtgtgtccttccccgttgg i canFam3.chr1 I 170 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 525492 217 - 2150887 I a score=1231811.000000 s hg38.chr18_GL383571v1_alt 175880 100 + 198278 acacaaggaaaatatgggagagagccttggttatacttacatgttgatggaaatttctc-tttctatgggttgggatacctag-tg-tggt-ggtccAGGCCTT------- s panTro5.chr18 65085919 100 + 78221452 acaaaaggaaaatatgggagagagccttggttatacttacatgttgatggaaatttctc-tttctatgggttgggatacctag-tg-tggt-agtccAGGCCTT------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204827 100 + 77229886 acacaaggaaaatatgggagagagccttggttatacttacatgttgatggaaatttctc-tttctatgggttgggatacctag-tg-tggt-agtccAGGCCTT------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424378 84 + 17472758 acacaaggaaaatatgggagagagccttggttatactcatACGTTGATGGAA-----------------GTTGGGATACCTAG-TG-TGGT-GGTCCAGGCCTT------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464875 100 - 152096393 acacaaggaaaatatgggagagagccttggttatactcacatgttgatggaaatttctc-tttctatgggttgggatacctag-tg-tggt-ggtccAGGCCTT------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414589 100 + 70235451 acacaaggaaaatatgggagagaattctggttgtactcacatgttgatggaaatttctc-tttctgtgggttggaatacttag-tg-tggt-ggtccagacctt------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63105907 100 - 75711847 acacaaggaaaatatgggagagagttctggttgtactcacatgttgatggaaatttctc-tttctgtgggttgggatacttag-tg-tggt-ggtccagacctt------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665236 100 - 18804593 acacaaggaaaatatgggagagagttctggttgtactcacatgttgatggaaatttctc-tttctgtgggttgggatacttag-tg-tggt-ggtccagacctt------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277066 100 + 18905526 acacaaggaaaatatgggagagagttctggttgtactcacatgttgatggaaatttctc-tttctgtgggttgggatacttag-tg-tggt-ggtccAGACCTT------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105596 100 - 72318688 acataaggaaaatatgggagagagttctggttgtactcacatgttgatggaaatttctc-tttctatgggttgggatacttag-tg-tggt-ggtccAGACCTT------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442403 100 - 1517660 acacaaggaaaatatgggagagagttctggttgtactcacatgttgatggaaatttctc-tttctgtgggttgggatacttag-tg-tggt-ggtccAGACCTT------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538293 100 + 6513552 acacaaggaaaatatgggagagagttttggttatactcacgtgttgatggaaatttctc-tttctatgggttgggatacttag-tg-tggt-ggtccAGGCCTT------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310113 100 + 117903854 ACACAGGGAAAACATGGAAGAGAGCCTTGGTTATACTCACATGTTGATGGAAATTTCTC-TTTCTATGGGTGGGGATACTTAG-TG-TGGT-GGTCCAGGCCTT------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496817 100 - 31320352 acacagggaaaatatggaagagaacctcgattatactcacatgtcggtggaaagttctc-tttctacaggtggggatacttag-tg-tggt-ggtcccggcctt------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692642 100 + 2203405 acacagggaaaatatggaagacagccttggttatactcaCATGTTGGTGGAAATTTCTC-TTTCTACAGGTGGGGATACTTAG-TG-TGGT-GGTCCAGGGCTT------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645036 100 - 14941987 acacagggaaaatatggaagagagccttggttatactcacgtgttggtggaaatttctc-tttctaagggtggggatacttag-tg-tggt-ggtccAGGCCTT------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298281 101 - 1406956 ccacaaggaaaacatgggagagaatcttggttatacttacatgttgacaaaaacctgtc-cttttatgggttcagatgcttagatg-tggt-ggtctatgcctt------- i proCoq1.NW_012148742v1 C 0 I 61 s otoGar3.GL873546 11271024 101 - 20685099 ccacaaggaaaatatagaagagaattttagttatactgacccgttgacaataatctgcc-tttctgagggttaggatatttagatg-cgat-ggtccaggcctt------- i otoGar3.GL873546 C 0 I 7 s canFam3.chr1 112348047 96 - 122678785 ccacaaggaagacatgag---gaatcttgg---tacttacatgttcatgaaaatctgtcacttctataggctagtgtacttag-gactggc-agcccagtccct------- i canFam3.chr1 C 0 I 8 s dasNov3.JH575754 525709 109 - 2150887 ACACAATGAGTATATAGTTGAACA-CTTggttcgacttaggtgttaaggaaagcttgtcatttctacaggttaaggtacttgggtg-tggcaggtccagtctccagctggt i dasNov3.JH575754 I 217 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=436157.000000 s hg38.chr18_GL383571v1_alt 175980 50 + 198278 GACCACCA------ATGGT------TCCTACAGTGCA----ACTATTATACTGGAGAC--ACTTTTGG s panTro5.chr18 65086019 50 + 78221452 GACCACCA------ATGGT------TCCTACAGTGCA----ACTATTATACTGGAGAC--ACTTTTGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204927 50 + 77229886 GACCACCA------ATGGT------TCCTACAGTGCA----ACTATTATACTGGAGAC--ACTTTTGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424462 49 + 17472758 GACCACCA------ATGGT------TCCTACAGTGCA----ACTATTATA-TGGAGAC--ACTTTTGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139464975 50 - 152096393 GACCACCA------ATGGT------TCCTACAGTGCA----ATTATTATACTTGAGAC--ACTTTTGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414689 56 + 70235451 gaccacca------atggttcctagtcctagtgtgca----actattctacttgagac--acttttgg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106007 56 - 75711847 gaccacca------atggttcctagtcctagtgtgca----actattctacttgagac--acttttgg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665336 56 - 18804593 gaccacca------atggttcctagtcctagtgtgca----actattctacttgagac--acttttgg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277166 50 + 18905526 GACCACCA------ATGGT------TCCTAGTGTGCA----ACTATTCTACTTGAGAC--ACTTTTGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105696 50 - 72318688 GACCACCA------ATGGT------TCCTAGTGTGCA----ACTATTCTACTTGAGAC--ACTTCTGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442503 50 - 1517660 GACCACCA------GTGGT------TCCTAGTGTGCA----ACTATTCTACTTGAGAC--ACTTTTGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538393 50 + 6513552 GACCACCA------ATGGT------TCCTAGTGTGCA----ACTATTCTACTTGAGAC--ACTTTTGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310213 50 + 117903854 GACCAGCA------ATAGT------TTCTACAGTGTG----GCTATCATACTCGAGAC--ACTTTTGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496917 50 - 31320352 gaccaaca------atagt------tcctacagtgca----actatcatacttgagac--acttttgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692742 50 + 2203405 GACCAACA------ATAGT------TCCTACAGTGCA----ACTATCATACTTGAGAC--ACTTTTGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645136 50 - 14941987 GACCAACA------ATAGT------TCCTACAGTGCA----ACTATCATACATGAGAC--ACTTTTGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11271132 55 - 20685099 gaccactgacctgcacctt------ttctacagtgca----acccttatgtatgatg---atgtctgg i otoGar3.GL873546 I 7 C 0 s canFam3.chr1 112348151 53 - 122678785 gaac-tca------cctgt------tccttccttgcactgcactactgtacgtgataagggctttt-- i canFam3.chr1 I 8 C 0 s dasNov3.JH575754 525818 55 - 2150887 gagtactcccctgcatctt------tccttgagtgaa----gccattataaatgaaaa--tgtcttg- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298382 61 - 1406956 I a score=2453723.000000 s hg38.chr18_GL383571v1_alt 176030 194 + 198278 TTTTTAAAAATCAAACCCATGGTGTGTTTTC-CCAG-C--AAGGGGTGGGGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGGTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC s panTro5.chr18 65086069 194 + 78221452 TTTTTAAAAATCAAACCCATGGTGTGTTTTC-CCAG-C--AAGGGGTGGGGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TCATCTAGATAGAAG-GAAGGTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64204977 194 + 77229886 TTTTTAAAAATCAAACCCATGGTGTGTTTTC-CCAG-C--AAGGGGTGGGGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGGTTAGGATAATGTGA-TGT-GATGGAAGACAAAAGATGTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424511 194 + 17472758 TTTTTAAAAATCAAACCCATGGTGTGTTTTC-CCAG-C--AAGGGGTGGGGAGAAGTATAAG-GTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACACAAATAATTGG---GTATCTAGATAGAAG-GAAGGTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465025 195 - 152096393 TTTGTAAAAATAGAACCTATGGTGTGTTTTC-TCAGCC--AAGGGGTGGGGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414745 194 + 70235451 tttttaaaaattgaacctgtggtgtgttttc-ccaG-C--AAGAGGTGGAGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAACTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106063 194 - 75711847 tttttaaaaattgaacctgtggtgtgttttc-ccaG-C--AAGAGGTGGAGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665392 194 - 18804593 tttttaaaaattgaacctgtggtgtgttttc-ccaG-C--AAGAGGTGGAGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277216 194 + 18905526 TTTTTAAAAATTGAACCTGTGGTGTGTTTTC-CCAG-C--AAGAGGTGGAGAGAAGTATAAG-TTCATGTGGATGAAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105746 194 - 72318688 TTTTTAAAAATTGAACCTGTGGTGTGTTTTC-CCAG-C--AAGAGGTGGAGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGGTAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442553 194 - 1517660 TTTTTAAAAATTGAACCTGTGGTGTGTTTTC-CCAG-C--AAGAGGTGGAGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538443 194 + 6513552 TTTTTAAAAATTGAAACTGTGGTGTGTTTTC-CCAG-C--AAGGGGTGGAGAGAAGTATAAG-TTCATGTGGATGGAATAGGAAGGGCAAATGCCTGTAGTGGGAGGGAGGCAGGCT--CAGAAGAAAAACAAAAATAATTGG---TTATCTAGATAGAAG-GAAGCTTAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310263 196 + 117903854 TTTTTAAAAATCAAACCTTTGGTGTGTTTTC-CTGG-T--AAGGG--TGGGAGAAGAATAAGTTTCATGTGGATGGAATAGCAAGGACAAATGCCTGTAGAGGGAGGGAGGCAGGCT--CACAAGAGAAACAGAAACGATTGGATTTCTTCTGGATAGAAG-AAAGCTGAGGATAATGTGA-TGT-GATGGAAGACTAAAGACGTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19496967 195 - 31320352 ttttaaaAAATCAAACTTATGGTGTGTTTTC-CTAG-T--AAGGGGTGGGGAGAAGAATAAGCTTCATGTGGATGGAATAGCAAGGACAAATGCCTGTAGAGGGAGGGAGGCAGGTT--CACAAGAGAAACAAAAACAATTGG---TTATCTGGGTAGATG-AAAGCTGAGGATAATGCAA-TGT-GATAGAAGACTAAAGATATTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692792 195 + 2203405 TTTTAAAAAATCAAACCTATGGTGTATTTTC-CTAG-T--AAGGGGTGGGGAGAAGAATAAGTTTCATGTGGATGGAATAGCAAGGACAAATGCCTGTAGAGGGAGGGAGGCAGGCT--CACAAGAGAAACAAAAACAATTGG---TTATCTGGTTAGAAG-AAAGCTGAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645186 195 - 14941987 TTTTTAAAAATCAAACCTATAGTGTGTTTTC-CCAG-T--AAGGGGTGGGGAGAAGAATAAGTTTCATGTGGATGGAATAGCAAGGACAAATGTCTGTAGAGGGAGGGAGGCAGGCT--CACAGGAGAAACAAAAACAATTGG---TTATCTGGATAGAAG-AAAGCTGAGGATAATGTGA-TGT-GATGGAAGACTAAAGATGTTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298443 194 - 1406956 tttttaaaaactgagcctatggtgtgttttc-acag-c--aGGGGGTTGGGAGAGAGACACGTTTCATGTGGATAGAAAAGCTGGTGCAGATGCCTATAGTGGGAGGAAGGTAGGCA--CACAGAA-AAACAAAAAGAATTGT---TTATCTGGATAGAAG-GAAGGTTAGGATAATGTGA-TGT-GAAGGAAAACTGGAAATGTTA i proCoq1.NW_012148742v1 I 61 C 0 s otoGar3.GL873546 11271187 197 - 20685099 ttttcaaagcctgagcctataatttgttttcaacag-c--aAGGGGTTGGGAGAGTGACAAGTTTCATGTGGATAAGATAGCAGGTGCAGATGCCTATAGTGGGAGGCAAGTAGGCAAGCACAAGA-AAACAAGAAGAAATGT---TTATCAGGATAGAAG-GAAGCTTAGGATAATGTCA-TGT-GGAGGAAAAGTGGAAACGTTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112348204 189 - 122678785 tttgaaaacactgaatctg--------tTTC-ATAG-C--AGTGAATGGGAAAAAGGATGTATTTTTTGTGGATGAAATAACAAGTGCTAATGCCTGCAGTAGAAGG-AAGCATGCA--TATAAGAAAAACAGAAAGAATTGT---TTATCTGTGTAGGAGAAAAGCTTAGGACAATGTGATTGTGGAAGGAAGCATGGAGATGTAT i canFam3.chr1 C 0 I 12 s dasNov3.JH575754 525873 179 - 2150887 tttttaagcactgaagctctggtgttttttt-ccCA-TAGAAAGGGTGAGGAGAGGGAAAATGTTCATGTGGGTAGAATAGCAAGTTTT-CTGACTGTGCT-------AGGTATGTT---ATAAGAAAACCAG----AATTGT---TTATGTGGATAGGAA-GAAACTGAGAATACAGTGA-TAT-GAGAGAAGACTGGAGA----- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=32040.000000 s hg38.chr18_GL383571v1_alt 176224 3 + 198278 AAC s panTro5.chr18 65086263 3 + 78221452 AAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205171 3 + 77229886 AAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424705 3 + 17472758 AAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465220 3 - 152096393 AAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414939 3 + 70235451 AAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106257 3 - 75711847 AAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665586 3 - 18804593 AAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277410 3 + 18905526 AAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105940 3 - 72318688 AAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442747 3 - 1517660 AAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538637 3 + 6513552 AAC i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19497162 3 - 31320352 AAC i saiBol1.JH378121 C 0 I 306 s cebCap1.NW_016107689v1 1692987 3 + 2203405 AAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645381 3 - 14941987 AAC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298637 3 - 1406956 AAC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11271384 3 - 20685099 AAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112348405 2 - 122678785 AA- i canFam3.chr1 I 12 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e calJac3.chr13 105310459 0 + 117903854 C e dasNov3.JH575754 526052 0 - 2150887 C a score=13600.000000 s hg38.chr18_GL383571v1_alt 176227 1 + 198278 C s panTro5.chr18 65086266 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205174 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424708 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465223 1 - 152096393 C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414942 1 + 70235451 C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106260 1 - 75711847 C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665589 1 - 18804593 C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277413 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105943 1 - 72318688 C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442750 1 - 1517660 C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538640 1 + 6513552 C i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1692990 1 + 2203405 C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645384 1 - 14941987 C i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298640 1 - 1406956 C i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11271387 1 - 20685099 C i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112348407 1 - 122678785 C i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e calJac3.chr13 105310459 0 + 117903854 C e dasNov3.JH575754 526052 0 - 2150887 C e saiBol1.JH378121 19497165 306 - 31320352 I a score=10920.000000 s hg38.chr18_GL383571v1_alt 176228 1 + 198278 A s panTro5.chr18 65086267 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205175 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424709 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465224 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414943 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106261 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665590 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277414 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105944 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442751 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538641 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s cebCap1.NW_016107689v1 1692991 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645385 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298641 1 - 1406956 A i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112348408 1 - 122678785 A i canFam3.chr1 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e calJac3.chr13 105310459 0 + 117903854 C e dasNov3.JH575754 526052 0 - 2150887 C e otoGar3.GL873546 11271388 0 - 20685099 C e saiBol1.JH378121 19497165 306 - 31320352 I a score=311415.000000 s hg38.chr18_GL383571v1_alt 176229 52 + 198278 TGTAAGAGTTAATACATAGGTTTATATA-------------------------GTATGGGGTTGTATTAGCTTTCCC s panTro5.chr18 65086268 52 + 78221452 TGTAAGAGCTAATACATAGGTTTATATA-------------------------GTATGGGGTTGTATTAGCTTTCCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205176 52 + 77229886 TGTAAGAGCTAATACATAGGTTTATATA-------------------------GTATGGGGTTGTATTAGCTTTCCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424710 52 + 17472758 TGTAAGAGCTAATACATGGGTTTATATA-------------------------GTATGGGGTTATATTAGCTTTCCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465225 52 - 152096393 TGTAAGAGCTAATACATAGGTTTATATA-------------------------GTATGGGGTTACATTAGCTTTCCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414944 52 + 70235451 TGTAAGAACTAATACATAGGTTTATATA-------------------------ATATGGGGTTATATTAGCTTTCCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106262 52 - 75711847 TGTAAGAACTAATACATAGGTTTATATA-------------------------ATATGGGGTTATATTAGCTTTCCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665591 52 - 18804593 TGTAAGAACTAATACATAGGTTTATATA-------------------------ATATGGGGTTATATTAGCTTTCCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277415 52 + 18905526 TGTAAGAACTAATACATAGGTTTATATA-------------------------GTATGGGGTTATATTAGCTTTCCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105945 52 - 72318688 TGTAAGAACTAATACATAGGTTTATATA-------------------------ATATGGGGTTATATTAGCTTTCCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442752 52 - 1517660 TGTAAGAACTAATACATAGGTTTATATA-------------------------GTATGGGGTTATATTAGCTTTCCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538642 52 + 6513552 TGTAAGAACTAATACATAGGTTTATATA-------------------------GTATGGGGTTATATCAGCTTTCCC i colAng1.NW_012115433v1 C 0 C 0 s canFam3.chr1 112348409 77 - 122678785 AGTAAGGTCTAATGTGTAGGGTAATAAAAATCAGTCCCATTATACCCAGGGCTGTCCTGGTTTACACTAACTTCTTC i canFam3.chr1 C 0 I 238 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298642 0 - 1406956 C e calJac3.chr13 105310459 0 + 117903854 C e dasNov3.JH575754 526052 0 - 2150887 C e otoGar3.GL873546 11271388 0 - 20685099 C e aotNan1.NW_018502140v1 3645386 0 - 14941987 C e cebCap1.NW_016107689v1 1692992 0 + 2203405 C e saiBol1.JH378121 19497165 306 - 31320352 I a score=291062.000000 s hg38.chr18_GL383571v1_alt 176281 51 + 198278 ATTGTATCTGGATGGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT s panTro5.chr18 65086320 51 + 78221452 ATTGTATCTGGATGGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205228 51 + 77229886 ATTGTATCTGGATGGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424762 51 + 17472758 GTTTTGTCTGGATGGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465277 51 - 152096393 ATTGTATCTGGATAGAAGCAGCTTAGGATAATGTGACATAATGGAAGACTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57414996 51 + 70235451 ATTGTATCTAGATAGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106314 51 - 75711847 ATTGTATCTAGATAGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665643 51 - 18804593 ATTGTATCTAGATAGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277467 51 + 18905526 ATTGTATCTGGATAGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60105997 51 - 72318688 ATTGTATCTGGATAGAAGCAGCTTAGCATAATGTGACATGATGGAAGACTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442804 51 - 1517660 ATTGTATCTGGATAGAAGCAGCTTAGGATAATGTGACATGATGGAAGACTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538694 51 + 6513552 ATTGTATCTGGATAGAAGCAGCTTAGGATAATATGACATGATGGAAGACTT i colAng1.NW_012115433v1 C 0 C 0 s dasNov3.JH575754 526052 13 - 2150887 --------TGGAT-GAAGCAGC----------------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298642 0 - 1406956 C e calJac3.chr13 105310459 0 + 117903854 C e canFam3.chr1 112348486 238 - 122678785 I e otoGar3.GL873546 11271388 0 - 20685099 C e aotNan1.NW_018502140v1 3645386 0 - 14941987 C e cebCap1.NW_016107689v1 1692992 0 + 2203405 C e saiBol1.JH378121 19497165 306 - 31320352 I a score=54392.000000 s hg38.chr18_GL383571v1_alt 176332 9 + 198278 AAGATATTT s panTro5.chr18 65086371 9 + 78221452 AAGATATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205279 9 + 77229886 AAGATATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424813 9 + 17472758 AAGATATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465328 9 - 152096393 AAGATATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415047 9 + 70235451 AAGATATTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106365 9 - 75711847 AAGATATTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665694 9 - 18804593 AAGATATTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277518 9 + 18905526 AAGATATTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106048 9 - 72318688 AAGATATTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442855 9 - 1517660 AAGATATTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538745 9 + 6513552 AAGATATTC i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19497471 9 - 31320352 aaGATATTC i saiBol1.JH378121 I 306 C 0 s dasNov3.JH575754 526065 2 - 2150887 ----TA--- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41556404 1849 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298642 0 - 1406956 C e calJac3.chr13 105310459 0 + 117903854 C e canFam3.chr1 112348486 238 - 122678785 I e otoGar3.GL873546 11271388 0 - 20685099 C e aotNan1.NW_018502140v1 3645386 0 - 14941987 C e cebCap1.NW_016107689v1 1692992 0 + 2203405 C a score=45840.000000 s hg38.chr18_GL383571v1_alt 176341 4 + 198278 AACC s panTro5.chr18 65086380 4 + 78221452 AACC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205288 4 + 77229886 AACC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424822 4 + 17472758 AACC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465337 4 - 152096393 AACC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415056 4 + 70235451 AACC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106374 4 - 75711847 AACC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665703 4 - 18804593 AACC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277527 4 + 18905526 AACC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106057 4 - 72318688 AACC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442864 4 - 1517660 AACC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538754 4 + 6513552 AACC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310459 4 + 117903854 AACC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497480 4 - 31320352 AACC i saiBol1.JH378121 C 0 C 0 s micMur3.chr19 41558253 4 + 83067054 AACC i micMur3.chr19 I 1849 C 0 s dasNov3.JH575754 526067 4 - 2150887 AACC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298642 0 - 1406956 C e canFam3.chr1 112348486 238 - 122678785 I e otoGar3.GL873546 11271388 0 - 20685099 C e aotNan1.NW_018502140v1 3645386 0 - 14941987 C e cebCap1.NW_016107689v1 1692992 0 + 2203405 C a score=5146.000000 s hg38.chr18_GL383571v1_alt 176345 1 + 198278 G s panTro5.chr18 65086384 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205292 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424826 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465341 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415060 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106378 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665707 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277531 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106061 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442868 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538758 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310463 1 + 117903854 G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497484 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s micMur3.chr19 41558257 1 + 83067054 A i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11271388 1 - 20685099 G i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 526071 1 - 2150887 A i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298642 0 - 1406956 C e canFam3.chr1 112348486 238 - 122678785 I e aotNan1.NW_018502140v1 3645386 0 - 14941987 C e cebCap1.NW_016107689v1 1692992 0 + 2203405 C a score=773674.000000 s hg38.chr18_GL383571v1_alt 176346 52 + 198278 AGTAAGATCTAATACATAGGTTTATAATCAATCTCATTTTGCCCAGGGTAGT s panTro5.chr18 65086385 52 + 78221452 AGTAAGATCTAATACATAGGTTTATAATCAATCTCATTTTGCCCAGGGTAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205293 52 + 77229886 AGTAAGATCTAATACATAGGTTTATAATCAATCTCATTTTGCCCAGGGTAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424827 52 + 17472758 AGTAAGATCTAATACCTAGGTTTATAATCAATCTCATTTTGCCCAGGGTAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465342 52 - 152096393 AGTAAGATCTAATACATAGGTTTATAATCAATCTCATTTTGCCCAGGGTAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415061 52 + 70235451 AGTAAGATCTAATACATAGGTTTATAATCAATCCCATTTTGCCCAGGGTAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106379 52 - 75711847 AGTAAGATCTAATACATAGGTTTATAATCAATCCCATTTTGCCCAGGGTAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665708 52 - 18804593 AGTAAGATCTAATACATAGGTTTATAATCAATCCCATTTTGCCCAGGGTAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277532 52 + 18905526 AGTAAGATCTAATACATAGGTTTATAATCAATCCCATTTTGCCCAGGGTAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106062 52 - 72318688 AGTAAGATCTAATACATAGGTTTATAATCAATCCCATTTTGCCCAGGGTAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442869 52 - 1517660 AGTAAGATCTAATACATAGGTTTATAATCAATCCCATTTTGCCCAGGGTAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538759 52 + 6513552 AGTAAGATCTAATACATAGGTTTATAAACAATCCCATTTTGCCCAGGGTAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310464 52 + 117903854 AGTAAGATCTAATACATAGGTTTATAATCAATTCCATTTTGCCCAGGATAGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497485 52 - 31320352 AGTAAGATCTAATACATAGGTTTATAATCAATTCGATTTTGCCCAGGGTAGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1692992 52 + 2203405 AGTAAGATCTAATACATAGGTTTATAATCAATTCCATTTTGCCCAGCGTAGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645386 52 - 14941987 AATAAGATCTAATACATAGATTTATAATCAGTTCCATTTTGCCCAGGATAGT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41558258 52 + 83067054 AGTAAGATCCAATATATAGGGTTATAATCAATCCCATTTTGCCCAGGGCAGT i micMur3.chr19 C 0 I 1688 s proCoq1.NW_012148742v1 1298642 52 - 1406956 AGTAAGATCCAATATATAGGGTTATAATCAATCCCGTTTTGCCCAGGGAAGT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11271389 52 - 20685099 AGTAAGATTCAATACCTGGGATAAAAATCAATTCCATTTTGCTCTGGGCAGT i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 526072 51 - 2150887 AGTAAGATCTAATAGAAAGGGTTATAATCAATCCTGCTtgactcagtttgc- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e canFam3.chr1 112348486 238 - 122678785 I a score=746501.000000 s hg38.chr18_GL383571v1_alt 176398 65 + 198278 ATGGGGTTACAATAGCTTTCCCatcttaagtattggtagtgcttcctgccaatctcaaacgtctc s panTro5.chr18 65086437 65 + 78221452 ATGGGGTTACAATAGCTTTCCCatcttaagtattggtagtgcttcctgccagtctcaaacgtctc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205345 65 + 77229886 ATGGGGTTACAATAGCTTTCCCatcttaagtattggtagtgcttcctgccagtctcaaacgtctc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424879 65 + 17472758 ATGGGGTTACAATAGCTTTCCTGTCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAATGTCTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465394 64 - 152096393 ATGGGATTA-AATAGCTTTCCCatcttaagtgttggtagtgcttcctgccaatctcaaacgtctc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415113 65 + 70235451 ATGGGGTTACATTAAGTTTCCCATCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAACATTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106431 65 - 75711847 ATGGGGTTACATTAAGTTTCCCATCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAACATTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665760 65 - 18804593 ATGGGGTTACATTAAGTTTCCCATCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAACATTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277584 65 + 18905526 ATGGGGTTACATTAAGTTTCCCATCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAACATTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106114 65 - 72318688 ATGGGGTTACATTAAGTTTCCCATCTTAAGTATTGGTAGTGCTTTCTGCCAATCTCAAACATTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 442921 65 - 1517660 ATGGGGTTACGTTAAGTTTCCCATCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAACATTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538811 65 + 6513552 ATGAGGTTACATTAACTTTCCCATCTTAAGTATTGGTAGTGCTTCCTGCCAATCTCAAACATTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310516 65 + 117903854 GTGGGTTTACATTAGCTTTCCCATCTCAAGTACTGGTAGTGCTTCCTGCTAATCTCAATCATTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497537 65 - 31320352 GTGGGTTTACATTAGCTTTCCCATCTCAAGTACTGATAGTGCTTTCTGCTAATCTCAAACATTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693044 65 + 2203405 GTGGGTTTACATTAGCTTTCCCGTCTCAAGTACTGGtagtgcttcctgctaatctcaaacatttc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645438 65 - 14941987 GTGGGTTTACATTAGCTTTCCCATCTCAAGTACTGGTAGTGCTTCCTGCTAATCTCAAACATTTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298694 65 - 1406956 ACTGGCTTACATTAGCTTTCCCAGCACaattattagtagtgctccctgtcaatgttgaaaatctc i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11271441 65 - 20685099 GCCGTCCTGTATTAGCTTTTCCGGCACAATTATTAGAAGCACTTCCAGTCAGTGTTGAAAATCTC i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 526123 65 - 2150887 ctggccctacattagctttcccagcataattttaaatagtgcttcctatctctctccaaagtcac i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e canFam3.chr1 112348486 238 - 122678785 I a score=506799.000000 s hg38.chr18_GL383571v1_alt 176463 41 + 198278 ttggtttggatgatacattttataatcaTGTTATATATGTt s panTro5.chr18 65086502 41 + 78221452 ttggtttggatgatacattttataatcaTGTTATATATGTt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205410 41 + 77229886 ttggtttggatgatacattttataatcaTGTTATATATGTt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424944 41 + 17472758 TTGGTTTGGATGATACATTTTATAATCATGTTATATATGTt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465458 41 - 152096393 ttggtttggatgatacattttataatcaTGTTATATATGTt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415178 41 + 70235451 TTGGTGGGGATGATACATTTTATAATCATGTTATATATATt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106496 41 - 75711847 TTGGTGGGGATGATACATTTTATAATCATGTTATATATGTt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665825 41 - 18804593 TTGGTGGGGATGATACATTTTATAATCATGTTATATATGTt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277649 41 + 18905526 TTGGTGGGGATGATACATTTTATAATCATGTTATATATGTt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106179 41 - 72318688 TTGGTGGGGATGATACATTTTATAATCATGTTATATATGTT i chlSab2.chr18 C 0 I 315 s manLeu1.NW_012106698v1 442986 41 - 1517660 TTGGTGGGGATGATACATTTTATAATCATGTTATATATGTt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538876 41 + 6513552 TTGGTGCGGATGATACATTTTATAATCATGTTATATATGTt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310581 41 + 117903854 TTGGTTTGGATGATACATTTTATGATCATGTTACATAtgtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497602 41 - 31320352 TTGGTTTGGAGGATATATTTCATGATCACATTACATAtgtt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693109 41 + 2203405 ttggtttggatgatacattttatgatcacGTTGCATAtgtt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645503 41 - 14941987 TTGGTTTGTATGATACATTTTATGATCACGTTACATAtgtt i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298759 41 - 1406956 ctggtttggatgatacattatatgatcaccctaTCTGTGTT i proCoq1.NW_012148742v1 C 0 I 148 s otoGar3.GL873546 11271506 41 - 20685099 CTGGCATGGAAGATACATTTTATGATCACCCTATTTGTGTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112348724 41 - 122678785 gtgccccAGATGAAACATTTTGTGATCACACTATCTGTGTt i canFam3.chr1 I 238 C 0 s dasNov3.JH575754 526188 19 - 2150887 ctagtttggatgacacatt---------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=1655006.000000 s hg38.chr18_GL383571v1_alt 176504 142 + 198278 aaagattttggtctttgtcttaacag---ta--agaagctgttaaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctgtcta-tactatgtagaataaattaccaaggca--------cttccaaagagac---- s panTro5.chr18 65086543 142 + 78221452 aaagattttggtctttgtcttaacag---ta--agaagctgttaaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctgtcta-tactaagtagaataaattaccaaggca--------cttccaaagagac---- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205451 142 + 77229886 aaagattttggtctttgtcttaacag---ta--agaagctgttaaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctctctgtctt-tactaagtagaataaattaccaaggca--------cttccaaagagac---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5424985 142 + 17472758 aaagattttggtctttgtcttaacag---ta--agaagctgttaaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctgtcta-tactacatagaataaattaccaaggca--------cttccaaagagac---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465499 142 - 152096393 aaagattttggtctttgtcttaacag---ta--agaagctgttaagaattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctcccgggcta-tactacatagaataaattaccaaggca--------cttccaaagagac---- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415219 142 + 70235451 aaagattttggtctttgtcttaacag---ta--agaagctgataaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctggcta-tactacgtagaataaattaccagggca--------cttctaaagagac---- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106537 142 - 75711847 aaagattttggtctttgtcttaacag---ta--agaagctgataagaattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctggcta-tactacgtagaataaattaccagggca--------cttctaaagagac---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13665866 142 - 18804593 aaagattttggtctttgtcttaacag---ta--agaagctgataaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctggcta-tactacatagaataaattaccagggca--------cttctaaagagac---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277690 141 + 18905526 aaagattttggtctttgtcttaacag---ta--agaa-ctgataaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctggcta-tactacgtagaataaattgccagggca--------cttctaaagagac---- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106535 142 - 72318688 aaagattttggtctttgtcttaacag---ta--agaagctgataaggattttaaatataaattaacatgaatatcagatttgagttttgcac-atatctccctggcta-tactatgtagaataaattaccaaggca--------cttccaaagagaa---- i chlSab2.chr18 I 315 C 0 s manLeu1.NW_012106698v1 443027 142 - 1517660 aaagattttgatctttgtcttaacag---ta--agaagctgataaggattttaaatataaattaacatgaatatcagatttgtgttttgcac-atatctccctggcta-tactacgtagaataaattgccagggca--------cttctaaagagac---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3538917 142 + 6513552 aaagattttggtctctgtcttaacag---ta--agaagctgataaggattttaaatataaattaacatgaatatcagatctgtgttttgcac-atatctccctggcta-tactacgtagaataaattaccgaggca--------cttccaaagagac---- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310622 142 + 117903854 -aagattttggtctttgtcttaacag---ta--agaagctgctaagggttttaaatataaaataatatgaatatcatatttttgtcttgcactatatctccctggcta-tcctgcgtagaataaattaccaaggta--------cttccaaagagac---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497643 142 - 31320352 -aagattttggtctttgtcttaacac---ta--agaagctggtaaaggttttaaatataaaataacatgaatatcacatttgtgttttgcaatatatctccctggcta-tactgcatagaataaattaccaaggta--------tttcaaaagagac---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693150 142 + 2203405 -aagattttggtctttgtcttaacag---ta--agaagctggtaagggttttaaatataaaataacatgaatatcagatttgtgttttgcactatatctccctggcta-tactgcgtagaataaattaccaaggta--------cgtccaaagagac---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645544 141 - 14941987 -aagatttt-ttctttgtcttaacag---ta--agaagctggtaagggttttaaatataaaataacatgaatatcagatttgtgttttgcactatatctctctggcta-tactgcgtagaataaattaccaaggta--------cttccaaagaggc---- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11271547 140 - 20685099 AAAATAtttggtctttcccttaacaa---ca--ataggaaattaagagttttaaacatagg-taacatgaatattacatttgagttttctac-gtatttctctggctattaatgagtagaacaagtcagcaagcag----------tgtagagggcc---- i otoGar3.GL873546 C 0 I 5 s canFam3.chr1 112348765 153 - 122678785 aaagatttttgtctttatcttaataatgtta--ggaagtcattgagactttcaaacatagagtaacatgaatatcagatttgtgttttgcac-atatttctctgacca-taccgagtagaacaaattagcacggggtcgtagagtttgcagggagag---- i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 526207 157 - 2150887 aaagattttggtctttatcttcaaaa---taataggaaccattaagggtttttagctcagggtaacctgaagatcatattttcatttggccccttatgcctctgaatg-tcttgggtagaacaaaccaacaagggatcgcaaagtgtactaagagagcatt i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1298800 148 - 1406956 I a score=417801.000000 s hg38.chr18_GL383571v1_alt 176646 27 + 198278 tagtctattgctgtagttctggcaaga s panTro5.chr18 65086685 27 + 78221452 tagtctattgctgtagttctggcaaga i panTro5.chr18 C 0 I 9 s panPan2.chr18 64205593 27 + 77229886 tagtctattgctgtagttctggcaaga i panPan2.chr18 C 0 I 2 s gorGor5.CYUI01014964v1 5425127 27 + 17472758 tagtttattgctgtagttctggcaaga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465641 27 - 152096393 tagtctattgctgtagttctggcaaga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415361 27 + 70235451 tagtctattgctgtagttctggcaaga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106679 27 - 75711847 tagtctattgctgtagttctggcaaga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666008 27 - 18804593 tagtctattgctgtagttctggcaaga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277831 27 + 18905526 tagtctattgctgtagttctggcaaga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106677 27 - 72318688 tagtctattgctgtagttctggcaaga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443169 27 - 1517660 tagtctattgctgtagttctggcaaga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539059 27 + 6513552 tagtctattgctgtagttctggcaaga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310764 27 + 117903854 aagtctattgctgtagttctggcaaga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497785 27 - 31320352 tagtgtattgctgtagttcgggcaaga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693292 27 + 2203405 tagtctattgctgtagttctggcaaga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645685 27 - 14941987 tagtctattgctgtagttctgacaaga i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298948 27 - 1406956 taatctgttgctgtagttctggcaaga i proCoq1.NW_012148742v1 I 148 C 0 s otoGar3.GL873546 11271692 27 - 20685099 tagtctgttgctatggttttggcaaga i otoGar3.GL873546 I 5 C 0 s canFam3.chr1 112348921 27 - 122678785 gagtccgttgctgtagttctgagtaca i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 526364 27 - 2150887 tagtctgttgcagtagctctggcaatg i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=43118.000000 s hg38.chr18_GL383571v1_alt 176673 5 + 198278 tacgg s panPan2.chr18 64205622 5 + 77229886 tacaa i panPan2.chr18 I 2 I 2 s gorGor5.CYUI01014964v1 5425154 5 + 17472758 tacgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465668 5 - 152096393 tatgg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415388 5 + 70235451 tatgg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106706 5 - 75711847 tatgg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666035 5 - 18804593 tatgg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277858 5 + 18905526 tatgg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106704 5 - 72318688 tatgg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443196 5 - 1517660 tatgg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539086 5 + 6513552 tatgg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310791 5 + 117903854 tatgg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497812 5 - 31320352 tatgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693319 5 + 2203405 tatgg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645712 5 - 14941987 tgtgg i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298975 5 - 1406956 tatgg i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11271719 1 - 20685099 t---- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112348948 5 - 122678785 tatgg i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 526391 5 - 2150887 cataa i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e panTro5.chr18 65086712 9 + 78221452 I a score=26451.000000 s hg38.chr18_GL383571v1_alt 176678 2 + 198278 tg s panTro5.chr18 65086721 2 + 78221452 tg i panTro5.chr18 I 9 C 0 s panPan2.chr18 64205629 2 + 77229886 tg i panPan2.chr18 I 2 C 0 s gorGor5.CYUI01014964v1 5425159 2 + 17472758 tg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465673 2 - 152096393 tg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415393 2 + 70235451 tg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106711 2 - 75711847 tg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666040 2 - 18804593 tg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277863 2 + 18905526 tg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106709 2 - 72318688 tg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443201 2 - 1517660 tg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539091 2 + 6513552 tg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310796 2 + 117903854 tg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497817 2 - 31320352 tg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693324 2 + 2203405 tg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645717 2 - 14941987 tg i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298980 2 - 1406956 ta i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112348954 2 - 122678785 ag i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 526396 2 - 2150887 tg i dasNov3.JH575754 C 0 I 5785 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e otoGar3.GL873546 11271720 0 - 20685099 C a score=1252197.000000 s hg38.chr18_GL383571v1_alt 176680 106 + 198278 cttgaatcagattgatggcagtgaagatggatggatgggacctagttggaGAAATGGGCTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- s panTro5.chr18 65086723 106 + 78221452 cttgaatcagattgatggcagtgaagatggatggatgggacctagttggaGAAATGGGCTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205631 106 + 77229886 cttgaatcagattgatggcagtgaagatggatggatgggacctagttggaGAAATGGGCTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5425161 106 + 17472758 cttgaatcagattgatggcagtgaagatggatggatgggacctagttggaGAAATGGGCTGTCAACTCTGCACTGTAGTCCTTACATGAACCTCTCCTAAACTGA---------T------------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465675 106 - 152096393 cttgaatcagactgatggcagtgaagatggatggatgggacctagttggaGAAATTGGCTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415395 106 + 70235451 cttgaatcagattgatggcagtgaagatggatggatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCGAAACTGA---------T------------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106713 106 - 75711847 cttgaatcagattgatggcagtgaagatggatggatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCGAAACTGA---------T------------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666042 106 - 18804593 cttgaatcagattgatggcagtgaagatggatggatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCGAAACTGA---------T------------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277865 106 + 18905526 cttgaatgagattgatggcagtgaagatggatggatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106711 106 - 72318688 cttgaatcagattgatggcagtgaagatggatggatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443203 106 - 1517660 cttgaatgagattgatggcagtgaagatggatgaatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539093 106 + 6513552 attgaatcagattgatggcagtgaagatggatggatgagacctagctggaGAAATGGACTGTCAACTCTGCACTGTAGTCCTTCCATGAACCTCTCCTAAACTGA---------T------------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310798 115 + 117903854 cttgaatcagattgatagcagtgaaaatggacagatgggacccaactggaGaaatgggctgtcaactctgcactgtattccttccatgatcctctcctcaactgaccttttcagt------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497819 115 - 31320352 cttgaatcagactgatagcagtgaagatggATGGATGGGACCCAACTGGAGaaatgggctgtcaactctgcactgtagtccttccataaaccactcttcgactgaccttttcagt------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693326 115 + 2203405 cttgaatcagattgatagcagtgaagatggatggatgggaccgaactggaGaaatgggctgtcaactctgcactgtagtcctttcatgaacctctccttgactgaccttttcagt------------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645719 110 - 14941987 cttgaatcagattgatagcagtgaagatggATGGATGGGACCCAACTGGAGaaatgggctgtcaactctgcactgtaatccttccatgaacctctcctcaa-----cttttcagt------------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1298982 107 - 1406956 cttgaaccagagcggtggcagcgaagatggatagatggagcctgattccagaaatGGGCTGTCAGCTATACACTGCACTCCTTTCGTGAATCTCTCCTCAACTGAC--------A------------- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11271720 86 - 20685099 --------------gtggcagcggagatggacggctggggcCTCATTCCAGAAATGGGCTGTCAACCATGCACTGCAGTCATTCCGCCAATCTCTCCTCA---------------------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112348956 112 - 122678785 cttgagctagaccagtggtagtgaagatggataga----------------agACAGGCTGTCACCTCTGCCTTGCAGTCCATTCTTGAATATCTGGTCAACTGTCCTTTTCTTTTCCTATAACTAAT i canFam3.chr1 C 0 I 155 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=5388380.000000 s hg38.chr18_GL383571v1_alt 176786 463 + 198278 GTTACACTCC-----------------------------------------------CCATGACTAGTAA-ATGCCCTTTACATTCTCTTAAAAACCAGGACCCCACTAGCACAATCAGACATGTTTCTActtaatct--------ctagaggataaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaaacctgcaagtctacctacatctgcacaaagcttctttccttctcggattacaatatgggaggtatctctctttttacctaaagtcaataataaatccacctctgatttggatcctagaaattatcttctcatctCTGCACCGCACTCAAtctccagattttatcccttctcactatctttttaacccaaagcattctggtgtctcccctcaccgtttcctgaaagggcttcttctgaggacatcaatgacatctatgtcattgaattcaataggactatt-ccaattctcatcttactt s panTro5.chr18 65086829 460 + 78221452 GTTACACTCC-----------------------------------------------CCGTGACTAGTAA-ATGCCCTTTACATTCTCTTAAAAACCAGGACCCCACTAGCACATTCAGACATGTTTCTACTTAATCT--------CTAGAGGAGAAATTGttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaaacctgcaagtctacctacatctgcacaaagcttcttttcttctcggattacaatatgggaggtatctctctttttacctaaagtc---aataaatccacctctgatttggatcctaGAAATTATCTTCTCAtgtctgcaccgcactcaatctccagattttatcccttctcactatcttttaaacccaaagcattctggtgtctcccctcaccgtttcctgaaagggcttctgctgaggacatcaatgacatctatgtcattgaattcaataggactatt-ccaattctcatcttactt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64205737 460 + 77229886 GTTACACTCC-----------------------------------------------CCGTGACTAGTAA-ATGCCCTTTACATTCTCTTAAAAACCAGGACCCCACTAGCACATTCAGACATGTTTCTACTTAATCT--------CTAGAGGAGAAATTGttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaaacctgcaagtctacctacatctgcacaaagcttcttttcttctcggattacaatatgggaggtatctctctttttacctaaagtc---aataaatccacctctgatttggatcctagaaattatcttctcatctCTGCACCGCACTCAAtctccagattttatcccttctcactatcttttaaacccaaagcattctggtgtctcccctcaccgtttcctgaaagggcttcttctgaggacatcaatgacatctatgtcattgaattcaataggactatt-ccaattctcatcttactt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5425267 460 + 17472758 GTTACACTCC-----------------------------------------------CCATGACTAGTAA-ATGCCCTTTACATTCTCTTAAAAACCAGGACCCCACTTGCACATTCAGACATGTTTCTACTTAATCT--------CTAGAGGAGAAATTGttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaaacctgcaagtctacctatatctgcacaaagcttcttttcttctcagattacaatatgtgaggtatctctctttttacctaaagtc---aataaatccacctctgacttggatcctagaaattatcttctcatctctgcacagcactcAAtccccagattttatcccttctcactatctttttaacccaaagcattctggtgtctcccctcaccatttcctgaaagggcttcttctgaggacatcaatgacatctatgtcattgaattcaataggactatt-ccaattctcatcttactt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139465781 460 - 152096393 GTTATACTCC-----------------------------------------------CCATGACTAGTAA-ATGCCCTTTACATTGTCTTAAAAACCAGGACCCCACTTGCACATCCAGACGTGTTTCTActtaatct--------ccacaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaagaattccctcattgtccagctgtcaaaccttcaagtctacctacatctgcacaaagcttcttttcttctcagattacaatataggaggtatctctctttttacctaaagtc---aataaatccacctctgatttggatcctagaaattatcttctcacctCTGCACAGCactcgatccccagattttatcccttctcactatctttttaacccaaattattctggtgtctcccctcactgtttcctgaaagggcttcttctgaggacatcaatgacatctatatcattgaattcaataggactatt-ccaattctcatcttactc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415501 460 + 70235451 GTTAcactct-----------------------------------------------ccatgactagtaa-atgccctttacattctcttaaaagctaggaccccacttgcacatccagacatatttctacttaatct--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcaagtctacctacatctgcacaaagcttcttttcttctcagattactatatgggaggtatctctctttttacctaaagtc---aataaatctacctctgatttggatcctagaaattatcttctcatctCTGCACAGCactcgattcccagattttatcacttctcactatccttttaacccaaagcattctggtgtctctgctcaccatttcctgaaaggacttcttctgaggacatcaatgacatctatgtcattgaattcaatagggctatt-ccaattctcatcttactc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63106819 460 - 75711847 GTTAcactct-----------------------------------------------ccatgactagtaa-atgccctttacattctcttaaaagctaggaccccacttgcacatccagacatatttctacttaatct--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcaagtctacctacatctgcacaaagcttcttttcttctcagattactatatgggaggtacctctctttttacctaaagtc---aataaatctacctctgatttggatcctagaaattatcttctcatctctgcacagcactcgattcccagattttatcacttctcactatccttttaacccaaagcattctggtgtctctgctcaccatttcctgaaaggacttcttctgaggacatcaatgacatctatgtcattgaattcaatagggctatt-ccaattctcatcttactc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666148 457 - 18804593 GTTAcactct-----------------------------------------------ccatgactagtaa-atgccctttacattctcttaaaagctaggaccccacttgcacatccagacatatttctacttaatct--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcaagtctacctacatctgcacaaagcttcttttcttctcagattactatatgggaggtatctctctttttacctaaagtc---aataaatctacctctgatttggatcctagaaattatcttctcatctCTGCACAGCactcgattcccagattttatcacttctcactatccttttaacccaaagcattctggtgtctctgctcaccatttcctgaaaggacttcttctgaggacatcaatgacatctatgtcattgaattcaatagggctatt-ccaatt---atcttactc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13277971 460 + 18905526 GTGAcactct-----------------------------------------------ccatgactagtaa-atgccctttacattctcttaaaagctaggaccccacttgcacatccagacatgtttctacttaatct--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcaagtctacctacatctgcacaaagcttcttttcttctcagattacaatatgggaggtatctctctttttacctaaagtc---aataaatctacctctgatttggatcctagaaattatcttctcatctCTGCACAGCactcgattcccagattttatcacttctcactatccttttaacccaaagcattctggtgtctccgctcaccacttcctgaaaggacttcttctgaggacatcaatgacatctctgtcattgaattcaatagggctatt-ccaattctcatcttactc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60106817 460 - 72318688 GTTACACTCT-----------------------------------------------CCATGACTAGTAA-ATGACCTTTACATTCACTTAAAAGCTAGGACCCCACTTGCACATCCAGACATATTTCTACTTAATCT--------CTAGAGGAGAAATTGttc--ttttttcttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcgagtctacctacatctgcacaaagcttcttttcttctcagattacaatatgggaggtatctctctttttacctaaagtc---aataaatctacctctgatttggatcctagaaattatcttctcatctctgcacagcactcgattcccagattttatcacttctcactatccttttaacccaaagcattctggtgtctccgctcaccatttcctgaaaggacttcttctgaggacatcaatgacatctatgtcattgaattcaatagggctatt-ccaattctcatcttactc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443309 460 - 1517660 GTGAcacttt-----------------------------------------------ccatgactagtaa-atgccctttacattctcttaaaagctagaaccccacttgcacacccagacatgtttctacttaatct--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcaagtctacctacatctgcacaaagcttcttttcttctcagattacaatatgggaggtatctctctttttacctaaagtc---aataaatctacctctgatttggatcctagaaattatcttctcatctCTGCACAGCactcgattcccagattttatcacttctcactatccttttaacccaaagcattctggtgtctccgctcaccatttcctgaaaggacttcttctgaggacatcaatgacatgtatgtcattgaattcaatagggctatt-ccaattctcatcttactc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539199 460 + 6513552 GTTACACTCT-----------------------------------------------CCATGACTAGTAA-ATGCCCTTTACATTCTCTTAAAAGCTAGGACCCCACTTGCACATCCAGACATGTTTCTACTTAATCT--------CTAGAGGAGAAATCGttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaattccctcattgtccagctatcaagcctgcaagtctacctacatctgcacaaagcttcttttcttctcaaattacaatatgggaggtatctctctttttacctaaggtc---aataaatccacctctgatttggatcctagaagttatcttctcatctCTGCACAGCactcgattcccagattttatcacttctcactatccttttaacccaaagcactctggtgtctccgctcaccatttcctgaaacgacttcttctgaggacatcaatgacatctatgtcattgaattcaatagggctatt-ccaattctcatcttactc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105310913 458 + 117903854 ctcccactct-----------------------------------------------ccgtgactagtaa-ataccctttacattctcttaaaaaccaggaccccacttgcacatccagacatgtttctccttaattt--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaactcccttattgtccagctatcaaacctgcaaatctacctacatctgcacaaaggctctttcctcctcagattgcaatatgagagctacctctcttttaacctaaagtc---aataaatccacttctgatttggacccTGGAAATTATCTTCttgtctctgcccagcatatgttccccagattttatcacttctcaccatc--ttcagcccaaagcattctcatgtctcccctcaccatttcctgaaaaggctccttctgaggacatcaatgacatctatgttgtttaattcaatagaactatt-ccaattctcatcttactc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19497934 458 - 31320352 ctcccactct-----------------------------------------------ccatgactagtaa-atactctttacattctcttaaaaactaggaccccacttgcacatccagacatgtttctccttaattt--------ctagaggagacattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaactcccttattgtgcagctatcaaacctgcaaatctacctacatctgcacaaagcctctttcctcctgagattacaatatgagagatatctctcttttaaccttaagtc---aataaatccacctctgatttggatccTGAAAATTATCTTCTTGTCTCTGCCCAGCATTTATtccccagattttatcacttctcactatc--ttcaacccaaagcattgtcctgtctcccctcaccatttcctgaaaaggctccttccgaggacatcaatgacatctatgtcgttttattcaatagaactatt-ccaattctcatcttattt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693441 458 + 2203405 ctcccactct-----------------------------------------------ccatgactagtaa-ataccctttacattctcttaaaaactaggaccccacttgcacatccagacatgtttctccttaattt--------ctagaggagaaattgttc--tttttccttgaaaact------------------------------aaa---------------------atcaatagacaggaacttccttattgtccagctatcaaacctgcaaatctacctacatctgcagaaaacctctttcttcctcagattacaatatgagaggtatctctcttttaacctaaagcc---aataaatccacctctgatttggatcccGGAAATTATCTTCttgtctctgcccagcgtttgttccccagattttatcacttctcactatc--ttcaacccaaagcattctcatgtctcccctcaccatttccggaaaaggctccttctgaggacatcaatgacatctatgtcttttaattcaatagaactatt-ccaattctcatcttattc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3645829 458 - 14941987 ctcccactct-----------------------------------------------ccatgactagtaa-ataccctttacattctcttaaaaactagaaccccacttgcacgtccagacatgtttatccttaattt--------ctagaggtgaaattattc--tttttccttgaaaacg------------------------------aaa---------------------atcaatacacagaaactcccttattgtccagctatcaaacctgcagatctacctacatctgcacaaagcctctttcctcctcagattacaatatgagaggtatctctcttttaacctaaagtc---agtaaatccacctctgatttggatccTGGAAATTATCTTCttgtctctgcccagcatttgttccccagattttatcacttctcactatc--ttcaaccgaaagcattctcatgtctcccctcaccatttcctgaaaaggctccttctgaggacatcaatgacatctatgtcatttaattcgatagaactatt-ccaattctcatcttactc i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1299089 459 - 1406956 TTTTCACTCT-----------------------------------------------CCAT-----GTAA-AAGCCGTTTTCATTCTTTTCTAAACTAGGACCCCATTTTCacttccagacatctttctccttactct--------caggaggggaaattgttccctttttccttgaaaacttaaa--------------------------aaa---------------------atcaataggcagggatgctctccttatccagctatcatacttgcaaatctctctgcaactgcacaaaacccttcttcttctctgattatg-tatgggaggtatcactacctttacctaa-gtc---aat-aatccacctctgatttggatcctgaaaattatcctctctcttctgcATAGCacttgatgcctcgattttctcacctcccgttcactttttaacctgatacattctggtgtcttccgtcaccatttcctgaaagggctatctctgaggacgcggacgaaatctacatcactagatccaacagatttttttccaactctcatcttgctt i proCoq1.NW_012148742v1 C 0 I 181 s otoGar3.GL873546 11271806 494 - 20685099 -----------------------------------------------------------CT-----GTAA-AAG-CATCTCCATTCTCTTCTAATCTAGGACCACCCTTCCACTCCCAAGCATCTTTCTCCTTACTCTCAGAGGGACAGAGGGAGAAATTGTTCATTCTATTCTTGAAAATTTAAATATATCAGCCACTGCAGTGGCCTTAGAAATAGCTGTACTATGATATATATATCAGTAGACGGGAGCATCCTCCTT-TTAGGCTATCAGACTTGCAAATCTCTCTACTTCTGCACAAAGCTCCCCTTTTACACAGATCACACTATGTGAAGTCTCATGACCGCTACCTG--------AAT-AACCCACCTCTGATTTTGATCCTGAAAATTATCCTCTCTCCTCCACACAGCACTGGATGCCTTGGTTTTCTCA---CCCATTACATGTTTAACTCAGTCCATTTTGGTGTCCTCTGTCACCATTTCCTGAAAGGACTCTCTCTGAGGACTACCGTGTGGTCTCTTTCACCGAACCCAATAGGTTTTTTCCCAAATCTCATCTTTCTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112349223 468 - 122678785 atcacgctctgagctgaaggcaggtgccaaaccactgagctacccagggatcccCTCCTATAACTAATAATAAGCCCTTTTCATTCTTTCCTAGACTGGGACCCCACTCCCCCTTATAGACATCTTCCTCCTTACCCT--------C---AGCAAAAGTTATTC-CCTCTTCCTTGAAAATG------------------------------AAA---------------------GCCAATACACTGGAACTCCTTCATTGGTTAGTGATAAGATTTGCAA-TCCACCTGCAGCTGCACAAAGCCCAT---CTTCTCAGATTAGAGTGTGAGAG---------------------GTC---------TCCACTTCCGATTGTGGTCCTGCGAATCATCCTCTC-TCCTGGCGTAGCTGTTAATGTC-AGCTtttctcatctctcactcacttgttattctgatcctttctggtttcttctcttgccatttcctgaaagg-ctccctctgaggacatcaatcaca-ctatgtcgttaaacccaatagatct----ccaggtcacattttacct i canFam3.chr1 I 155 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=1890968.000000 s hg38.chr18_GL383571v1_alt 177249 182 + 198278 gacctctcatcagcatatgatattgttgttcattgtacgtctttgaaactgtcatttacactggcctgtgaacagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--attggaccctcaaagagccttaaggctcctggactgtctcc-ccttctcactctgtcctctca-- s panTro5.chr18 65087289 182 + 78221452 gacctctcatcagcatatgatattgttgttcactgtacgtctttgaaactgtcatttacattggcctctgaacagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--attggaccctcaaagagccttaaggctcctggactgtcttc-ccttctcactctgtcctctca-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64206197 182 + 77229886 gacctctcatcagcatatgatattgttgttcactgtacgtctttgaaactgtcatttacattggcctctgaacagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--attggaccctcaaagagccttaaggctcctggactgtcttc-ccttctcactctgtcctctca-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5425727 182 + 17472758 gacctctcatcagcatatgatattgttgttcactgtacgtctttgaaactgtcatttacattggcctctgaacagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--attggagcctcaaagagcctcaaggatcctggactgtcttc-ccttctcactctgtcctctca-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139466241 180 - 152096393 aacctctcatcagcatatgatattgttgttcactgtacatcttcgaaactgttatttacattggcctctgaatagtaactttcctaattttcacctctacctcctttgcagtcct---tacc----ttggagcctcaaagagtctcaaggctcctggactgtcttc-ccttctcactctgtcctctca-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57415961 182 + 70235451 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaactgttatttacattggcctctgaaaagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--gttggagcctcaaagagcctcaaggctcctggaccgtcttc-ccttctcactctgtcttctca-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63107279 182 - 75711847 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaactgttatttacattggcctctgaaaagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--gttggagcctcaaagagcctcaaggctcctggaccgtcttc-ccttctcactctgtcttctca-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666605 182 - 18804593 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaactgttatttacattggcctctgaaaagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--gttggagcctcaaagagcctcaaggctcctggaccgtcttc-ccttctcactctgtcttctca-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13278431 182 + 18905526 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaactgttatttacattggcctctgaaaagtaactttcctaattttcacctcaacctcctttgcagtcct---tacct--gttggagcctcaaagagcctccaggctcctggaccgtcttc-ccttctcactctttcttctca-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60107277 182 - 72318688 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaactgttatttacattggcctctgaaaagtaactttcctaattttcacctctacctcctttgcagtcct---tACTT--GTTGGAGCCTCAAAGAGCCTCAAGGCTCCTGGACCATCTTC-CCTTCTCACTCTGTCTTCTCA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443769 182 - 1517660 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaactgttatttacattggcctctgaaaagtaactttcctaattttcacctctacctcctttgcagtcct---tacct--gttggagcctcaaagagcctccaggctcctggaccgtcttc-ccttctcactctttcttctca-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539659 182 + 6513552 gacctctcatcagcacatgatattgttgttcactgtacatctttgaaattgttatttacattggcctctgaaaagtaactttcctaattttcacctctacctcctttgcagtctt---tacct--gttggagcctcaaatagcctcaaggctcctggaccgtcttc-ccttctcactctgtcttctca-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105311371 176 + 117903854 gacctctcagcagcctgtgatac---tgttcagtgtatgtctttgaagctattatttacactggcctctg---agtaactttcctcattttcacctctacctcctttgcagtcct---tacct--attggaaccttgaagaacctcaaggctcttggaccatattt-ccttcctactctatcctctca-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19498392 179 - 31320352 gacctctcagcagccaatgatactgttgttcaacgtatgtctttgaagctattatttacactggcctctg---agtaactttcctcattttcacctcttcctcctttgcagtcgt---tacct--attggaacctcaaagaacctcaaggctcttggaccatattt-ccttcctactctgtcctctca-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1693899 179 + 2203405 gacctctcagcagcctatgatactgttgttcagcgtatgtctttgaagctattatttacactgtcctctg---agcaattttcctcattttcacctctacctcctttgcagtcct---tacct--attggaacctcaaagaacctcaaggctcttggaccatattt-ccttcctactctgtcctctca-- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3646287 179 - 14941987 gacctctcagcagcctatgatactgttgttcagtgtatgtctttgaagctgttatttacactggcctctg---aataactttcctcattttcacctctacctcctttgcagtcct---tatct--attggaacctcaaagaacctcaaggctcttggatgatattt-ccttcctactctatcctctca-- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11272300 178 - 20685099 ----------GAGACTGTGATGTTGCCATTCACTCTGTTTCCTTGAAACCATCATTTACACCAGAGTCTGAAGAGAAAATTTTCTTCTTTTTCTCTCTATGTTGTTAGCTGTATTACATACGTGCATTGGAACCCCAGAGATCCTCAAAGTTCCTGGACCCTCTCTACACTCTTGCTGCAGCCTTCCA-- i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112349691 162 - 122678785 gacctctcagtggcatttgatgttgttgtgcactcgctcttcttggaacaGTCACTAACACAGGC-----------AACTTTCC-ACCTATCCCCTCTACCTCTTTAGCAGCCAT---TACAT--GCTGAA---------ATCCTCCAAGATCCTGAACCATCTAT-TCTT-TTACTCTATCCTCTCTAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1299548 181 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=379254.000000 s hg38.chr18_GL383571v1_alt 177431 35 + 198278 ctatacaatcttatatatgaccacgtcttt-------------------------------aacag s panTro5.chr18 65087471 35 + 78221452 ctatacaatcttatatatgaccacgtcttt-------------------------------aacag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64206379 35 + 77229886 ctatacaatcttatatatgaccacgtcttt-------------------------------aacag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5425909 35 + 17472758 ctatacaatcttatatatgaccacgtcttt-------------------------------aacag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139466421 35 - 152096393 ctatacaatcttatatatgaccatgtcttg-------------------------------aacag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416143 35 + 70235451 ctgtacaatcttatatatgaccatgtcttt-------------------------------aacag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63107461 35 - 75711847 ctgtacaatcttatatatgaccatgtcttt-------------------------------aacag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666787 35 - 18804593 ctgtacaatcttatatatgaccatgtcttt-------------------------------aacag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13278613 35 + 18905526 ctgtacaatcttatatatgaccacgtcttt-------------------------------aacag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60107459 35 - 72318688 CTATACAATCTTATATATGACCACGTCTTT-------------------------------AACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443951 35 - 1517660 ctgtacaatcttatatatgaccacgtcttt-------------------------------aacag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539841 35 + 6513552 ctatacaatcttatatatgaccacgtcttt-------------------------------accag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105311547 35 + 117903854 ctgtataatcttatatatggccccatcatt-------------------------------aatag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19498571 35 - 31320352 ctgtataatcttatatacgaccccatcatt-------------------------------aatag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694078 35 + 2203405 ctgtgtaatcttatatatgaccccatcatt-------------------------------aatag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3646466 35 - 14941987 ctgtataatcttatatatgaccccatcatt-------------------------------aatag i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1299729 35 - 1406956 ctataaaatcttgtgtatgtgcacaccttt-------------------------------aatag i proCoq1.NW_012148742v1 I 181 C 0 s otoGar3.GL873546 11272479 25 - 20685099 CATTAAATTCTTATGT----------CTTT-------------------------------AATAG i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112349853 66 - 122678785 CTATCCAATCTTGTACATGATTATGTCttttttttaaagattttatttatttatcctgagaaacag i canFam3.chr1 C 0 I 163 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=2218157.000000 s hg38.chr18_GL383571v1_alt 177466 216 + 198278 ccatccataga---ttaattttctacttttatatgtcgaaatctgggtaatcaactgcctttttagtagtaccaatggaatgtctcaaaaatcaacccaa--------------aaactcaaatggccaaactcaaatttgcaaattcctcttactctaaacctgatccatttccattcccttgtattttgggaagtgtcacatacatccagtcacataagccagaatgccag- s panTro5.chr18 65087506 216 + 78221452 ccatccataga---ttaattttctatatttatatgtcgaaatctgggtaatcaagtgcctttttagtagtaccaatggaatgtctcaaaaatcaacccaa--------------aaactcaaatggccaaactcaaatttgcaaattcctcctactctaaacctgatccatttccattcccttgtattttgggaagtgtcacatacatccagtcacataagccagaatgccag- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64206414 216 + 77229886 ccatccataga---ttaattttctatatttatatgtcgaaatctgggtaatcaagtgcctttttagtagtaccaatggaatgtctcaaaaatcaacccaa--------------aaactcaaatggccaaactcaaatttgcaaattcctcctactctaaacctgatccatttccattcccttgtattttgggaagtgtcacatacatccagtcacataagccagaatgccag- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5425944 214 + 17472758 ccatccataga---ttaattttctacatttatatatcgaaatctggg-aatcaagtgcctttttagtagtaccaatggaatgtctcaaaaatcaacccaa--------------aaactc-aatggccaaactcaaatttgcaaattcctcctactctaaacctgatccatttccattcccttgtattttgggaagtgtcacatacatctagtcacataagccagaatgccag- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139466456 212 - 152096393 ccatccataga---ttaattttctac----atgtatcgaaatccaggtaatcaaatgcctttttagtagtaccaatggaatgtctcgaaaatcaactcaa--------------aaactcaaatggccatactcaaatttgcagattcctcctactctaaacctgatccatttccattcccttgtattttgggaagtgtcacatacatctagtcacataagcgagaatgccag- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416178 215 + 70235451 ccaaccataga---taaattttttacatttatatctcgaaatccaggtaatcaaatgtctttttagtaataccaatggaatgtctcaaaaatcaacccca--------------aaactcaaatggccaaactcaaatttgctaattcctcctactctaaacctgatccatttccattcccttgtattttgagaagtgtcacatacatctagtcacat-agccagaatgccag- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63107496 215 - 75711847 ccaaccataga---taaattttttacatttatatctcgaaatccaggtaatcaaatgtctttttagtaataccaatggaatgtctcaaaaatcaacccca--------------aaactcaaatggccaaactcaaatttgctaattcctcctactctaaacctgatccatttccaTTCCCTTGTATTTTGAGAAGTGTCACATACATCTAGTCACAT-AGCCAGAATGCCAG- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13666822 215 - 18804593 ccaaccataga---taaattttttacatttatatctcgaaatccaggtaatcaaatgtctttttagtaataccaatggaatgtctcaaaaatcaacccca--------------aaactcaaatggccaagctcaaatttgctaattcctcctactctaaacctgatccatttccattcccttgtattttgagaagtgtcacatacatctagtcacat-agccagaatgccag- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13278648 215 + 18905526 ccaaccataga---taaattttttacatttatacctcgaaatccaggtaatcaaatgtctttttagtaataccaatggaatgtctcaaaaatcaacccca--------------aaactcaaatgaccaaactcaaatttgctaattcctcctactctaaacctgatccatttccattcccttgtattttgagaagtgtcacatacatctagtcacat-agccagaatgccag- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60107494 229 - 72318688 CCAACCATAGA---GAAATTTTTTACATTTGTATATCGAAATCCAGGTAATCAAATGTCTTTTTAGTAATACCAATGGAATGTCTCAAAAATCAACCCCAAAACTCAAATGGCCAAACTCAAATGGCCAAACTCAAATTTGCTAATTCCTCCTACTCTAAACCTGATCCATTTCCATTCCCTTGTATTTTGGGAAGTGTCACATACATCTAGTCACAT-AGCCAGAACGCCAG- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 443986 215 - 1517660 ccaaccataga---taaattttttacatttatacctcgaaatccaggtaatcaaatgtctttttagtaataccaatggaatgtctcaaaaatcaacccca--------------aaactcaaatggccaaactcaaatttgctaattcctcctactctaaacctgatccatttccattcccttgtattttgagaagtgtcacatacatctagtcacat-agccagaatgccag- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3539876 215 + 6513552 ccaaccataga---taaattttctacatttatatatcgaaatctgggtaatcaaatgtctttttagtaataccaatgaaatgtctcaaaaatcaacccca--------------aaactcaagtggccaaactcaaatttgctaattcctcctactctaaacctgatccatttccattcccttgtattttgggaagtgtcacatacatctagtcacat-agccagaacgccag- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105311582 198 + 117903854 ccatccataga---ttaattttctacatttacatatccaAGTTAAGGTAATCAAATGCCTTTTTAGTAGTGCCAATGGAACTTCTCATAAATGTAACCAA--------------AAATTCACATGGCCTAACTGAAATTTGCAAATTCCTCCTACTCTAAACCTGATCCATTTCCATTCCC-TGTATTTTAGGAAGTGTCAC--A--------------AGTCA-AACGTCAA- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19498606 201 - 31320352 ccatccttaga---ttaactttctacatttacatattcaAGTTAAGGTAATCAAATGTTCTTTCAGTAGTGCCAGTGGAATTTCTCACAAATGAAACCAA--------------AAATTCACATGGCCAGACTGAAATTTGCAAATTCCTCCTACTCTAAACCTGATCCATTTCAATTCCC-TGTATTTTGGGAAGTGTCACATA--------------AGTCAGAATGCCAA- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694113 201 + 2203405 ccatccataga---ttaattttctacatttacgtatccaAGTTAAGGTAATCAAATGCCCTTTTAGTAGTGCCAACAAAATTTCTCACAAATGAAACCAA--------------AAATTCATATGGCCAGACTGAAATTTGCAAATTCCTCCTACTCTAAACCTGATCCATTTCCATTCCC-TGTATTTTGGGAAGTGTCACATA--------------AGTCAGAATGCCAA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3646501 201 - 14941987 ccatccataga---ttaattttctatatttacatatccaAGTTAAGGTAATCAAATGCCCTTTTAGTAGTGCCAATGGAATTTCTCACAAACGAAACCAG--------------AAATTCACATGGCCAAACTGAAATTTGCAAATTCCTCCTACTCTAAACCTGATCCATTTCCATTCCC-TGTATTTTGGGAAGTGTCACATA--------------AGTCAGAATGCCAA- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1299764 219 - 1406956 ccatacatagattgttaatttcccacactaatatatccggatcaaggtaatcgaatgccttcttaatagtaccaattgaatgtttcaaaaatcaaaccgc--------------aatttcacatagcctagctcaaatttgtgagttccacctaccctaaatctgatcatcttccattcccttgtattttatgaagtgttgcatgcacttaatcacataagtcagaatgccag- i proCoq1.NW_012148742v1 C 0 I 77 s otoGar3.GL873546 11272504 206 - 20685099 TCATCCACACATTGTTCATTT-GGACATTTATATATCGAGATCAAGGTAATTGAACACCTTCGTA--AGTACCATTTGAGTCCCTCAAAAATCGAACTGA--------------AATTTCACAGAGTCATGCTCAGACTTGTGCG--CCACCTTCCCGATGTCT-----TCTTT--TTCCTTCCAATTCAAAGAAACATTGTGC-CGTCTACTCACGTAAATCAGTGTGCCAG- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112350082 213 - 122678785 CAATCCATAGATTATTAATTTCCCACATTTACATAGCCAGGTCAAGGTAACCAAATGATTTCTTAATAGTACCAACTGATTGTCTTGAAAGCAAATC--A--------------AAATTCACAAAGCTAAGTCCAAATCTGTGATTGCTTCCCACCCT-CACTTGGTCATCTTCCA-TCACTCATATGTTA--CAGTGGCCCA-ACATGTAGCCACATATGTCAGAGTGCCACT i canFam3.chr1 I 163 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=819170.000000 s hg38.chr18_GL383571v1_alt 177682 77 + 198278 aatc--ttttatgcttccattatctcatagcttatctttcaaaatgttcggctagctctatt-ctctaaatatTTAAAAG s panTro5.chr18 65087722 77 + 78221452 aatc--ttttatgcttccattatctcataacttatctttcacaaagttctgctagctctatt-ctctaaatatTTAAAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64206630 77 + 77229886 aatc--ttttatgcttccattatctcataacttatctttcacaaagttctgctagctctatt-ctctaaatatTTAAAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426158 77 + 17472758 aatc--ttttatgcttccattatctcatagcttatctttcacaaagttctgctagctctatt-ctctaaatatTTAAAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139466668 77 - 152096393 aatc--ttttatgcttccgttgtctcatagcctatctttcacgaagttctgctagctctatt-ctctaaatatTTAAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416393 77 + 70235451 aatc--ttttatgcttccagtatctcatagtttatctttcatgaagttctgctagtcctctt-ctctaaatatTTAAAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63107711 77 - 75711847 AATC--TTTTATGCTTCCAGTATCTCATAGTTTATCTTTCATGAAGTTCTGCTAGTCCTCTT-CTCTAAATATTTAAAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667037 77 - 18804593 aatc--ttttatgcttccagtatctcatagtttatctttcgtgaagttctgctagtcctatt-ctctaaatatTTAAAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13278863 77 + 18905526 catc--ttttatgcttccagtatctcatagtttatctttcatgaagttctgctagtcctatt-ctctaaatatTTAAAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60107723 77 - 72318688 AATC--TTTTATGCTTCCAGTATCTCATAGTTTATCTTTCATGAAGTTCTGCTAGTCCTATT-CTCTAAATATTTAAAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444201 77 - 1517660 aatc--ttttatgcttccagtatctcatagtttatctttcatgaagttctgctagtcctatt-ctctaaatatTTAAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540091 77 + 6513552 aatc--ttttatgcttccattatctcatagtttatctttcatgaagttctgctagttctatt-ctctaaatatTTAAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105311780 77 + 117903854 CATC--CTTTATGCTTCCATCATCTCATAGTTTATCTTTCACCAAGTTCAGCTAGTTCTTTT-CTCTAAGTATTTAAAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19498807 77 - 31320352 CATC--CTTTATGCTTCCATCATCTCATCGTTTATTTTTCACCAAGTTCAGCTAGTTCTTTT-CTCTAAATATTTAAAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694314 76 + 2203405 CATC--CTTTATGCTTCCATCATCTCATAGTTTATCTTTCACCAACTTCAGCTAGTTCTTTT-CTCTAAA-ATTTAAAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3646702 77 - 14941987 CATC--CTTAATGCTTCCATCATCTCATAGTTTATCTTTCACCAAGTTCAGCTAGTTCTTTT-CTCTAAATATTTAAAAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11272710 78 - 20685099 --TCAACTTTCTGCTTTTGTCTCTCCATAGTTTATTTTTCACCAAGTTCTGTAAATTCTATTCCCCTACGTATCTAAAAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112350295 76 - 122678785 TATC--TTTCATGCTTCTATC-TCCTGTAGCTCATCTGGCACCAATTTCTGTCAGTTCTATT-CCCTGAATATTTAACAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1299983 77 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=3477478.000000 s hg38.chr18_GL383571v1_alt 177759 271 + 198278 AGTGGTATTTGCTGTACTCTCtgattttctgcagtagcaatgaattgtgtgggtacagtcatggagaaagcagattataaagtcaatccaagattaggtttcaccttggacacagtacaaggagactgtggtatttgcagcagtgctactgaaatgatgttccatgaatctatctgtatacagaaggaactatgaatatGGCAAGCTTCTGTAATGAATTTCTGATGCGGCTGACAAATGATCCTAGAGAAAGAGCTGTACAAGTAAGCTG s panTro5.chr18 65087799 270 + 78221452 AGTGGTATTTGCTGTACTCTCtgattttctgcagtagcaatgaattgtgtgggtacagtcatggagaaagcagattataaagtcaatccaagattaggtttcaccttggacacagtacaaggagactgtggtatttgcagcagtgctactgaaatgatgttccatgaatctatctgtatacagaaggaactatgaatatGGCAAGCTTCTGTAATGAATTTCTGATGCGGCTG-CAAATGATCCTAGAGAAAGAGCTGTACAAGTAAGCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64206707 270 + 77229886 AGTGGTATTTGCTGTACTCTCtgattttctgcagtagcaatgaattgtgtgggtacagtcatggagaaagcagattataaagtcaatccaagattaggtttcaccttggacacagtacaaggagactgtggtatttgcagcagtgctactgaaatgatgttccatgaatctatctgtatacagaaggaactatgaatatGGCAAGCTTCTGTAATGAATTTCTGATGCGGCTG-CAAATGATCCTAGAGAAAGAGCTGTACAAGTAAGCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426235 271 + 17472758 AGCGGTATTTGCTGTACTCTCTGATTTTCTGCAGTAGCAATGGATTGTGTGGGTACAGTCATGGAGAAAGCAGATTATAAAGTCAACCCAAGATTAGGTTTCACCTTGGACGCAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCATGAATCTGTCTGTATACAGAAGGAACTATGAATATGGCAAGCTTCTGTAATGAATTTCTGATGCGGCTGACAAATGGTCCTAGAGAAAGAGCTGTACAAGTAAGCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139466745 269 - 152096393 AGTGGTATTTGCTGTA--CTCTGATTTTCTGCAGTAGCAATGAATTGTTTGGGTACAATCATGGAGAAAGCAGATTATAAAGTCAATCCAAGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGAATCTATCTGTATACAGAAGGAACTGTGAATATGGCAAGCTTCTGTAATGAATTTCTGATGCGGCTGACAAATGGTCTTAGAGAAAGAGCTGTACAAGTAAGCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416470 271 + 70235451 AGTGGTATTTGCTGTACTCTCTGATTTTCTGCAGTAGCAATGAATTGTGTGGGTATAATCATGGAGAAAGCAGATTATAAAGTCAATTGAGGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGAATCTAGCTGTATTCAGAAGGAACTATGGATATGGCAAGCTTTTGTAATGAATTTCGGATGCGGCTGACAAATGGTCTTAGAGAAAGAGCTGTACAGGTAAGCTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63107788 271 - 75711847 AGTGGTATTTGCTGTACTCTCTGATTTTCTGCAGTAGCAATGAATTGTGTGGGTATAATCATGGAGAAAGCAGATTATAAAGTCAATTGAGGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGAATCTAGCTGTATTCAGAAGGAACTATGGATATGGCAAGCTTTTGTAATGAATTTCGGATGCGGCTGACAAATGGTCTTAGAGAAAGAGCTGTACAAGTAAGCTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667114 271 - 18804593 AGTGGTATTTGCTGTACTCTCTGATTTTCTGCAGTAGCAATGAATTGTGTGGGTATAATCATGGAGAAAGCAGATTGTAAAGTCAATTCAAGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGAATCTAGCTGTATTCAGAAGGAACTATGGATATGGCAAGCTTTTGTAATGAATTTCGGATGCGGCTGACAAATGGTCTTAGAGAAAGAGCTGTACAAGTAAGCTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13278940 271 + 18905526 AGTGGTATTTGCTGTACTCTCTGATTTTCTGCAGTAGCAATGAATTGTGTGGGTATAATCATGGAGCAAGCAGATTATAAAGTCAATTCAAGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGTATCTAGCTGTATACAGAAGGAACTATGGATATGGCAAGCTTTTGTAATGAATTTCCGATGCGGCTGACAAATGGTCTTAGAGGAAGAGCTGTACAAGTAAGCTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60107800 263 - 72318688 AGTGGTATTTGCTGTACTCTCTGAT--------GTAGCAATGAATTGTGTGGGTATAATCATGGAGAAAGCAGATTATAAAGTCAATTCAAGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGAATCTAGCTGTATACAGAAGGAACTATGAATATGGCAAGCTTTTGTAATGAATTTCTGATGCAGCTGACAAATGGTCTTAGAGAAAGAGCTGTACAAGTAAGCTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444278 271 - 1517660 AGTGGTATTTGCTGTACTCTCTGATTTTCTGCAGTAGCAATGAATTGTGTGGGTATAATCATGGAGAAAGCAGATTATAAAGTCAATTCAAGATTAGGTTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCACGCATCTAGCTGTATACAGAAGGAACTATGGATATGGCAAGCTTTTGTAATGAATTTCCGATGCGGCTGACAAATGGTCTTAGAGAAAGAGCTGTACAAGTAAGCTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540168 271 + 6513552 AGTGGTATTTGCTGTACTCTCTGATTTTCTGTAGTAGCAATGAATTGTGTGGGTGTAATCATGGAGAAAGCAGATTATAAAGTCAATTCAAGATTAGATTTCACCTTGGACACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGATGTTCCATGAATCTAGCTGTTTACAGAAGGAACTATGAATATGGCAAGCTTTTGTAATGAATTTCTGATGTGGCTGACCAATGGTCTTAGAGAAAGAGCTGTACAAGTAAGCTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105311857 270 + 117903854 AGTGACATTTGCTGTACTTTCTTATTCTCTGCAGTAGCAATGAATTGTGTGGGTATACTCATGGAGGAAGCAGATTATAAAGTCAATCCAATATTAGGTTTCACCTTGAAGACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGAGGTTGTATGAATCTAGCTGTGTACAGAAGGAACTATGAATATGGCAAGATTCTCTTTTGAATTTCTGATGTGATCAACAACTGGTCTTAGGGATAGTGTTGTA-AAGTAAGCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19498884 270 - 31320352 AGTGGCATTTGCTGTACTTTCTTATTCTCTGCAGTAGCAATGAATTGTGTGGTTATACTCATGGAGAAGGCAGATTATAAAGTCAATCCAAGATTAGGTTTCACCTTGAAGACAGCACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGAGGTTCTATGAATCTAACTGTGTACAGAAGGAACTATGAATATGGCAAACTTGTGTATTGAATTTCTGATGTGACCAACAACTGGTCTTAGGGAAAGAGTTGTA-AAGTAAGTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694390 270 + 2203405 AGTGGTATTTGCTGTACTTTCTTATTCTCTGCAGTAGCAATGAATTGTGTGGGTATACTCATGGAGAAAGCAGATTATAAAGTCAATCCAAGATTAGGTTTCACCTTGAAGACAGTACAAGGAGACTGTGGTATTTGCAGCAGTGCTACTGAAATGAGGTTCTATGAATCTAGCTGTGTACAGAAGGAACTATGAATATGGCAGGCTTCTGTATTGAATTTCTGATGTGACCAACAACTGGTCTTAGGTAAAGAGTTGTA-AAGTAAGCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3646779 270 - 14941987 AGTGGCATTTGCTGTACTTTCTTATTCTCTGCAGTAGCAATGAATTGTGTGGGTATACTCATGGAGAAAGCAGATTATAAAGTCAATCCAAGATTAGGTTTCACCTTGAAGACAGTACAAGGAGACTGTAGTATTTGCAGCAGTGCTACTGAAATGAGGTTCTATGAATCTAGCTGTGTACAGAAGGAACTATGAATATGGCAAGTTTCTGTATTGAATTTCTGATGTGACCAACAACTGGTCTTAGGGAAAGAGTTTTA-AAGTAAGCTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1300060 271 - 1406956 AATGGCATTTGCTTTATTTTCTTAATCTCTATGGTAGCAGTGAGTTGTGTGGGTATAATCATAGAGAAAACAGATTATAAAGTCAATCCAAGATTAGGTTTTACTTTGTACACAGTACAGGGAGACTGTGGTATTTCCAGCAGTGCTATTGAAAAGATATGTCATGCATCTAGCTGCATACAGAAGGAACTATGAATATGGCAAACTTATGTATTAAATTTCTGATGTGGCTGACAAATGGCCTTGGAGAAATAGCAGTACAAGTAAGCTG i proCoq1.NW_012148742v1 I 77 I 1712 s otoGar3.GL873546 11272788 261 - 20685099 AATGACATTTATTTTATTT--------TCTATAGTAGCAATAAGTTTTGTGGGTACAGTCATAGAGAAAGCAGATTATAAAGTCAATCCAAGATGGGGTTTTACTTTGCACACAGTACAGGGAGGCTGTGGTATTTGCAGCAGTGCGATTGAAAAGATACATCATGAATCTAGCTGCACACAGGAGGGACTATGAATATAGCAAGCTTATGTGTTACATTTCAGATGTGGCAGACGAATGCCCTT--AGAAATAGCTGTACAAGGAAGTTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112350371 263 - 122678785 AATGGCATTTGTCTTATTTTCTTGTTCTCTACAGAAGTAATAAGTTGTATGGATACAATCATGGACAGAGCAGATCATAAAGTCAATCTAAGATTAGATCGTGCCCTGAACACAGTACAAGGAGACGGCAGTATTTGCAGCAGTGATAC-------ATACATCACTAACCGAGCTGCACACAGAAGGAACTATGAATATGGCACACTTGTCTACTGACGTTCTTGTGTAGATAA-AAATGGCCTTAGAGAAATAGCTGCATACGTGAGCTG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=368143.000000 s hg38.chr18_GL383571v1_alt 178030 30 + 198278 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG s panTro5.chr18 65088069 30 + 78221452 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64206977 30 + 77229886 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426506 30 + 17472758 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467014 30 - 152096393 CAGA-AAGAGGAGGTGTTTTAAGAAAACAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416741 30 + 70235451 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63108059 30 - 75711847 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667385 30 - 18804593 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13279211 30 + 18905526 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60108063 30 - 72318688 CAGA-AAGAGGAGGTGTTTTGAGAAAACAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444549 30 - 1517660 CAGA-AAGACGAGGTGTTTTGAGAAAACAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540439 30 + 6513552 CAGA-AAGAGGAGGTGTTTTGAGAACACAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105312127 30 + 117903854 CAGG-AAGAGGAGGTGTTTTGAGGGAACGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499154 30 - 31320352 CAGA-AAGAGGAGGTGTTTTAAGGGAACAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694660 30 + 2203405 CAGA-AAGAGGAGGTGTTTTGAAAGAACAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3647049 30 - 14941987 CAGA-AAGAGGAGGTGTTTTGAGGGAACAAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11273049 30 - 20685099 -AGAGGAGAGGAGATGTTTTCAGGAAATAAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112350634 30 - 122678785 GAAG-AAGAGGAAGTGTTTCCAGAAAACAAG i canFam3.chr1 C 0 I 45 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=232314.000000 s hg38.chr18_GL383571v1_alt 178060 22 + 198278 tgtatcagtccatttttatact s panTro5.chr18 65088099 22 + 78221452 tgtattagtccatttttatact i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207007 22 + 77229886 tgtattagtccatttttatact i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426536 22 + 17472758 tgtattagtccatttttatact i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467044 22 - 152096393 tgtattagtccatttttatact i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416771 22 + 70235451 tgtattagtccatttttatact i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63108089 22 - 75711847 tgtattagtccatttttatact i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667415 22 - 18804593 tgtattagtccatttttatact i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13279241 22 + 18905526 tgtattagtccctttttatact i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60108093 22 - 72318688 tgtattagcccatttttatact i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444579 22 - 1517660 tgtattagtccctttttatact i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540469 22 + 6513552 tgtattagtccatttttatact i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105312157 22 + 117903854 tgcattagtccatttttatgca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499184 22 - 31320352 tgcattagtccatttttatact i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694690 22 + 2203405 tgcattagtccatttttatact i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3647079 22 - 14941987 tgcattagtccatttttatact i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11273079 22 - 20685099 AAtctttatcttttcttatcct i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112350664 45 - 122678785 I a score=294786.000000 s hg38.chr18_GL383571v1_alt 178082 31 + 198278 gctataaagaactgcccgagactggataatt s panTro5.chr18 65088121 31 + 78221452 gctatgaagaactgcccgagactggataatt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207029 31 + 77229886 gctatgaagaactgcccgagactggataatt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426558 31 + 17472758 gctataaagaactgcctgagactggataatt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467066 31 - 152096393 gctataaagaactgcccgagactggataatt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416793 31 + 70235451 gctataaagaacggcccgagactgaataatt i rheMac8.chr18 C 0 I 26 s macFas5.chr18 63108111 31 - 75711847 gctataaagaacggcccgagactgaataatt i macFas5.chr18 C 0 I 26 s macNem1.NW_012016688v1 13667437 31 - 18804593 gctataaagaacggcccgagactgaataatt i macNem1.NW_012016688v1 C 0 I 26 s cerAty1.NW_012001075v1 13279263 31 + 18905526 gctataaagaacggcccgagactgaataatt i cerAty1.NW_012001075v1 C 0 I 26 s chlSab2.chr18 60108115 31 - 72318688 gctataaggaacggcccaagactgaataatt i chlSab2.chr18 C 0 I 26 s manLeu1.NW_012106698v1 444601 31 - 1517660 gctataaagaacggcccgagactgaataatt i manLeu1.NW_012106698v1 C 0 I 26 s colAng1.NW_012115433v1 3540491 31 + 6513552 gctataaagaatggcccgagactgaataatt i colAng1.NW_012115433v1 C 0 I 26 s calJac3.chr13 105312179 31 + 117903854 gttatgaagaactgcccgagactgggtaatt i calJac3.chr13 C 0 I 22 s saiBol1.JH378121 19499206 31 - 31320352 gttataaagaactgcccgagactgggtgatt i saiBol1.JH378121 C 0 I 22 s cebCap1.NW_016107689v1 1694712 31 + 2203405 gttataaagaactgcctgagactgggtaatt i cebCap1.NW_016107689v1 C 0 I 26 s aotNan1.NW_018502140v1 3647101 31 - 14941987 gttacaaagaactgcctgagattgggtattt i aotNan1.NW_018502140v1 C 0 I 22 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112350664 45 - 122678785 I e otoGar3.GL873546 11273101 0 - 20685099 C a score=-1203.000000 s hg38.chr18_GL383571v1_alt 178113 6 + 198278 gcct--ca s panTro5.chr18 65088152 6 + 78221452 gact--ca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207060 6 + 77229886 gact--ca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426589 4 + 17472758 gact---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467097 4 - 152096393 aact---- i nomLeu3.chr4 C 0 C 0 s calJac3.chr13 105312232 4 + 117903854 gact---- i calJac3.chr13 I 22 C 0 s saiBol1.JH378121 19499259 4 - 31320352 gact---- i saiBol1.JH378121 I 22 C 0 s aotNan1.NW_018502140v1 3647154 6 - 14941987 gactca-- i aotNan1.NW_018502140v1 I 22 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112350664 45 - 122678785 I e otoGar3.GL873546 11273101 0 - 20685099 C e cebCap1.NW_016107689v1 1694743 26 + 2203405 I e colAng1.NW_012115433v1 3540522 26 + 6513552 I e manLeu1.NW_012106698v1 444632 26 - 1517660 I e chlSab2.chr18 60108146 26 - 72318688 I e cerAty1.NW_012001075v1 13279294 26 + 18905526 I e macNem1.NW_012016688v1 13667468 26 - 18804593 I e macFas5.chr18 63108142 26 - 75711847 I e rheMac8.chr18 57416824 26 + 70235451 I a score=1211881.000000 s hg38.chr18_GL383571v1_alt 178119 128 + 198278 cacagttcggcgtggctggggaggcctcaggaaacttacaatcatggcagaaggcagagaggaaacaaggcaccttcttcagatctgataagaactcacctatcaggagaacagcatgggagaaacca- s panTro5.chr18 65088158 128 + 78221452 cacagttcggcatggctggggaggcctcaggaaacttacagtcatggcagaaggcaaagaggaaacaaggcatcttcttcagatctgataagaactcacctatcaggagaacagcatgggagaaacca- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207066 128 + 77229886 cacagttcggcatggctggggaggcctcaggaaacttacagtcatggcagaaggcaaagaggaaacaaggcatcttcttcagatctgataagaactcacctatcaggagaacagcatgggagaaacca- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426593 128 + 17472758 cacagttcggcatggctggggaggcctcaggaaacttacaatcatggcagaaggcaaagaggaaacaaggcaccttcttcagatctcatgagaactcacctatcatgagaacagcatgggagaaacca- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467101 128 - 152096393 catagttcagcatggctggggaggcctcaggaaacttataatcatggcagaaggcaaagaggaaacaaggcaccttcttcagatctcatgagaactcacctatcatgagaagagcatgggagaaacca- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416850 128 + 70235451 cacagtttggcgtggctggggaggcatcaggaaacttacagttatggaagaaggccaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaacagcatgggagaaacca- i rheMac8.chr18 I 26 C 0 s macFas5.chr18 63108168 128 - 75711847 cacagttcggcatggctggggaggcatcaggaaacttacagttatggaagaaggccaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaacagcatgggagaaacca- i macFas5.chr18 I 26 C 0 s macNem1.NW_012016688v1 13667494 128 - 18804593 cacagttcggcatggcgggggaggcatcaggaaacttacaattatggaagaaggccaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaacagcatgggagaaacca- i macNem1.NW_012016688v1 I 26 C 0 s cerAty1.NW_012001075v1 13279320 128 + 18905526 cacagttcggcatggctggggaggcatcaggaaacttacaattatggaggaaggccaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaacagcatgggagaaacca- i cerAty1.NW_012001075v1 I 26 C 0 s chlSab2.chr18 60108172 128 - 72318688 cacagttcagcatggctggggaggcatcaggaaacttacaattatagaagaaggccaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaatagcatgggagaaacca- i chlSab2.chr18 I 26 C 0 s manLeu1.NW_012106698v1 444658 128 - 1517660 cacagttcggcatggctggggaggcatcaggaaacttacaattatggaagaaggccaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaacagcatgggagaaacca- i manLeu1.NW_012106698v1 I 26 C 0 s colAng1.NW_012115433v1 3540548 128 + 6513552 cacagttcggcatggctggggaagcatcaggaaacttacaattatggcagaaggaaaagaggaaacaaggcaccttcttcagatctcatgagaactcacctgtcatgagaacagcctgggagaaacca- i colAng1.NW_012115433v1 I 26 C 0 s calJac3.chr13 105312236 128 + 117903854 cacagtttggcatgactggggaggcctcaggaaaattacaaccatggcagaagg-aaaggggaaacaaggcatcttcttcagatctcatgagaacttacctgtcatgggaacagcatgggagaaaccac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499263 127 - 31320352 cacagtttggcatgactggggaggcttcaggaaaactacaatcatggcagaagg-aaa-aggaaataaggcatcttcttcagatcttatgagaacttacctatcatgagaacagcatgggggaaaccac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694769 128 + 2203405 cagagtttggcatgactagggagagctcaggaaaattaaaatcatgacagaagg-aaaggggaaacaaggcatcttcttcagattccatgggaacttacgtatcatgagaacagcatgggagaaactac i cebCap1.NW_016107689v1 I 26 C 0 s aotNan1.NW_018502140v1 3647160 126 - 14941987 --cagtttggcatgactggggaggcctcaggaaaattacaatcatggcagaagg-aaaggggaaacaaggcatcttcttcagatctcatgagaacttacctgtcatgagaacagcatgggagaaaccac i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112350664 45 - 122678785 I e otoGar3.GL873546 11273101 0 - 20685099 C a score=1072167.000000 s hg38.chr18_GL383571v1_alt 178247 115 + 198278 caccatgattcatat----acctccacctggtctctcccttgacacatggaga----ggagattatgggggtt-aaattcaatatgagatttgagtggagactcaaagcctaatcacatcaCGA s panTro5.chr18 65088286 115 + 78221452 caccatgattcatat----acctccacctggtctctcccttgacacatggaga----ggagattatgggggtt-aaattcaatatgagatttgagtggggactcaaagcctaatcacatcaCGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207194 115 + 77229886 caccatgattcatat----acctccacctggtctctcccttgacacatggaga----ggagattatgggggtt-aaattcaatatgagatttgagtggggactcaaagcctaatcacatcaCGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426721 115 + 17472758 caccatgattcatat----acctccacctggtctctcccttgacacacggaga----ggggattatgggggtt-aaattcaatatgagatttgagtggggactcaaagcctaattacatcaTGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467229 115 - 152096393 caccatgattcaatt----acctccacctggtctctcccttgacgcatggaga----ggggattatgggggtt-aaattcaatatgagatttgagtggggactcaaagcctaatcacatcaTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57416978 119 + 70235451 caccatgattcagtc----acctccacctggtctctcccttgacacatggagattatggggattacgggggtt-aaattcaatatgagatctgagtggggactcgaagcctaatcacgtcaCGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63108296 119 - 75711847 caccatgattcagtc----acctccacctggtctctcccttgacacatggagattatggggattacgggggtt-aaattcaatatgagatctgagtggggactcgaagcctaatcacgtcaCGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667622 119 - 18804593 caccatgattcagtc----acctccacctggtctctcccttgacacatggagattatggggattacgggggtt-aaattcaatatgagatctgagtggggactcgaagcctaatcacgtcaCGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13279448 119 + 18905526 caccatgattcagtc----acctccacctggtctctcccttgacacatggagattatggggattacgggggtt-aaattcaatatgagatctgagtggggactcgaagcctaatcacgtcaCGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60108300 119 - 72318688 caccatgattcagtc----acctccacctggtctctcccttgacacatggagattatggggattacgggggtt-aaattcaatatgagatctgagtggggactcgaagcctaatcacgtcaCGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444786 119 - 1517660 caccatgattcagtc----acctccacctggtctttcccttgacacatggagattatggggattacgggggtt-aaattcaatatgagatctgagtggggactcgaagcctaatcacgtcaCGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540676 119 + 6513552 caccatgattcagtc----acctccacctggtctctcctttgacacatggagattgtggggattacgggggtt-aaattcaatatgagatttgagtggggactcaaagcctaatcaCGTTACGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105312364 120 + 117903854 ccccatgattcagta----acctccacctggtctctcccttgacacatagagattatgaggattgtgggggttccaattcaatatgagatttgaagggggactcaaagcctaatcCCAGCACAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499390 120 - 31320352 ccccatgattcagta----acctccacctggtctctcccttgacacatggagattatgaggattatggggattccaattcaatgtgaggtttgagtggggactcaaagcctaatcacagcaCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1694897 120 + 2203405 ccccatgattcagta----acctccacctggtctttccattgacacatggagattatgaggattatgggggttccaattcaatatgagatttgagtggggactcaaagcctaatcacagcaCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3647286 111 - 14941987 ccccatgattcagta----gcctccacctggtctctcccttgacacatggagatta---------tgggggttccaattcaatatgagatttgagtggggactcaaagcctaatcacagcaCAA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112350709 51 - 122678785 caccacaactcctacttcttcctcctcctTTTTTTTTTCTTTTTGCATTGA------------------------------------------------------------------------- i canFam3.chr1 I 45 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e otoGar3.GL873546 11273101 0 - 20685099 C a score=106042.000000 s hg38.chr18_GL383571v1_alt 178362 13 + 198278 -TTCTTTCTGTTTC s panTro5.chr18 65088401 13 + 78221452 -TTCTTTCTGTTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207309 13 + 77229886 -TTCTTTCTGTTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426836 13 + 17472758 -TTCTTTCTGTTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467344 9 - 152096393 -----TTCTGTTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417097 13 + 70235451 -TTCTTTCTGTTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63108415 13 - 75711847 -TTCTTTCTGTTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667741 13 - 18804593 -TTCTTTCTGTTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13279567 13 + 18905526 -TTCTTCCTGTTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60108419 13 - 72318688 -TTCTTTCTGTTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444905 13 - 1517660 -TTCTTTCTGTTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540795 13 + 6513552 -TTCTTTCTGTTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105312484 9 + 117903854 -TTCTTTC----TT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499510 13 - 31320352 -TTCTTTCTTTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695017 10 + 2203405 -TTCTTTT---TTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3647397 13 - 14941987 -TTCTTTCTTTTTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11273101 13 - 20685099 -ttctttcttttct i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112350760 13 - 122678785 CTTTTTTTTTTTT- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41558310 1688 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=280100.000000 s hg38.chr18_GL383571v1_alt 178375 22 + 198278 TTATTTTTCTTGCATTCACATT s panTro5.chr18 65088414 22 + 78221452 TTATTTTTCTTGCATTCACATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207322 22 + 77229886 TTATTTTTCTTGCATTCACATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426849 22 + 17472758 TTATTTTTCTTGCATTCACATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467353 22 - 152096393 TTATTTTTCTTGCATTCATATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417110 22 + 70235451 TTATTTTTCTTGCATTCACATT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63108428 22 - 75711847 TTATTTTTCTTGCATTCACATT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667754 22 - 18804593 TTATTTTTCTTGCATTCACATT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13279580 22 + 18905526 TTATTTTTCTTGCATTCACATT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60108432 22 - 72318688 TTATTTTTCTTGCATTCACATT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444918 22 - 1517660 TTATTTTTCTTGCATTCACATT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540808 22 + 6513552 TTATTTTTCTTGCGTTCACATT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105312493 22 + 117903854 TTATTTTTCTTGCATTCACATT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499523 22 - 31320352 TTATTTTTCTTGCATTCACATT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695027 22 + 2203405 TAATTTTTCTTGCATTCACATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3647410 22 - 14941987 TTATTTTTCTTGCATTCACATT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41559998 22 + 83067054 TTATTTTTCTTGCATTCACATT i micMur3.chr19 I 1688 I 152 s otoGar3.GL873546 11273114 22 - 20685099 ttttttttttttatttttcatt i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112350773 8 - 122678785 --------------TTAATATC i canFam3.chr1 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=1463744.000000 s hg38.chr18_GL383571v1_alt 178397 150 + 198278 TTTAAATTTCTAGTCAGAct----cagtgctaaaaataggccagtgaaccagagaactaaatcccttgatgcctgggaggcttaccttcatgcaaagcta---------------acatacaat--acctacatatac----aaaaat--a-ta----aggtt-ttatagcaacaaataacag s panTro5.chr18 65088436 150 + 78221452 TTTAAATTTCTAGTCAGAct----cagtgctaaaaataggccagtgaaccagagaactaaatcccttgatgcctgggaggcttaccttcatgcaaagcta---------------acatacaat--acctacatatac----aaaaat--a-ta----aggtt-ttatagcaacaaataacag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207344 150 + 77229886 TTTAAATTTCTAGTCAGAct----cagtgctaaaaataggccagtgaaccagagaactaaatcccttgatgcctgggaggcttaccttcatgcaaagcta---------------acatacaat--acctacatatac----aaaaat--a-ta----aggtt-ttatagcgacaaataacag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5426871 150 + 17472758 TTTAAATTTCTAGTCAGAct----cagtgctaaaaataggccagtgaaccagagaactaaatcccttgatgcctgggaggcttaccttcatgcaaagcta---------------acatacaat--acctacatatac----aaaaat--a-ta----aggtt-ttatagcaacaaataacag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467375 149 - 152096393 TTTAAATTTCTAGTCAGAct----cagtgctaaaaatagaccagtgaaccagagaact-aatctcttgatgcctgggaggcttaccttcatgcaaatcta---------------acatacaat--acctacatatac----aaaagt--a-ta----aggtt-ttatagcaacaaataacag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417132 165 + 70235451 TTTATATTTCTAGTCAGAct----cagtgctaaaaatagaccagtgaaccagagcactaaatcccttgatgcccgggaggcttaccttcatgcacagctaatacctacatacaatacatacaat--acctacacatac----aaaagt--a-ta----aggtt-ttatagcaacaaataacag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63108450 165 - 75711847 TTTATATTTCTAGTCAGAct----cagtgctaaaaatagaccagtgaaccagagcactaaatcccttgatgcccaggaggcttaccttcatgcacagctaatacctacatacaatacatacaat--acctacacatac----aaaagt--a-ta----agatt-ttatagcaacaaataacag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13667776 165 - 18804593 TTTATATTTCTAGTCAGAct----cagtgctaaagatagaccagtgaaccagagcactaaatcccttgatgcccgggaggcttaccttcatgcacagctaatacctacatacaatacatacaat--acctacacatac----aaaagt--a-ta----agatt-ttatagcaacaaataacag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13279602 165 + 18905526 TTTATATTTCTAGTCAGAct----cagtgctaaaaatagaccagtgaaccagagcactaaatcccttgatgcccgggaggcttaccttcatgcacagctaatacctacatacaatacatacaat--acctacacatac----aaaagt--a-ta----agatt-ttatagcaacaaataacag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60108454 150 - 72318688 TTTATATTTCTAGACAGAct----cagtgctaaaaatagaccagtgaaccagagcactaaatcccttgatgcccgggaggcttaccttcatgcacagcta---------------acatacaat--acctacatatac----aaaaat--a-ta----agatt-tcatagcaataaataacag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 444940 165 - 1517660 TTTATATTTCTAGTCAGAct----cagtgctaaaaatagaccagtgaaccagagcactaaatcccttgatgcccgggaggcttaccttcatgcacagctaatacctacatacaatacatacaat--acctacacatac----aaaagt--a-ta----agatt-ttatagcaacaaataacag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3540830 151 + 6513552 TTTATATTTCTAGTCAGAct----cagtgctaaaaatagaccagtgaaccagagcactaaatcccttgatgcccgggaggcttaccttcatgcacagcta---------------acatacaat--acttacatatac----aaaaat--atta----agatt-ttatagcaacaaataacag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105312515 147 + 117903854 TTAAAATTTCTAGTTAGAct----cagtgctaaaaatagaccagtgaaccaaagaactaaaacccctgatgcctaggaggattaccttcatgtaaagcta---------------acatatagt--acctacatatac----aaaaaag-a-ta----atgtt-ttgtagcaaa----aacag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19499545 147 - 31320352 TTAAAATTTCTAGTTAGAct----cagtgctaaaaatagactagtgaaccaaataactaaaacccctgatgcctaggaggcttacctttatgtaatgtta---------------acatacaat--acctacatatac----aaaaaag-a-ta----atgtt-ttatagcaac----aacag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695049 147 + 2203405 TTAAAATTTCTAGTTAGAct----cagtgctaaaaatagaccagtgaaccaaagaactaaaacccctgatgcctaggaggcttaccttcatgaaatgcta---------------acatacaat--acctacatatac----aaaaaag-a-ta----atgtt-gtatagcaac----aacag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3647432 148 - 14941987 TTAAAATTTCTAGTTAGAct----cagtgctaaaaatagaccagtgaaccaaagaactaaaacccctgatgcctaggaggcttaccttcgtgtaaagcta---------------acatacaat--acctacatatac----aaaaaaata-ta----atgtt-ttatagcaac----aacag i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11273136 152 - 20685099 ---------tTAGCCAAGTTTCTGCAGTTTTAAAGGTACACAAGTAAACCAGAGGAAAAAATCCCTTGCCACCATAGAGACTTATCTTAGAGTAAAAGCA---------------ACATACAATAAATCTACATGCAC----AAATGC--A-TATCTCATATTATTAATGCAGAGGATTACAA i otoGar3.GL873546 C 0 I 4 s canFam3.chr1 112350781 146 - 122678785 -----AATTCTAGTTAGGTC----CAGTGCTCAAGGTAGGCAaggggaccaaacaaagaaagcccctattctcatgggagttta-ctgtatcttcgaatg-----------------gtccaat--aaacacacatacaactaagcat--a-ta----atgtt-acctagtaagaaatgctag i canFam3.chr1 C 0 C 0 e micMur3.chr19 41560020 152 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=4682862.000000 s hg38.chr18_GL383571v1_alt 178547 407 + 198278 gaaggtaataaagcagattaagaagcaaaagaaacactgaaatgctaatttagagatccttctt-ctgggtgatatttgagccgggaccaaaagaagtgacagaataaggcaagagaatttca-gtcgatacatcagctga----------gacacaggcctggagaca--gaagtgcctagtgagac-----tga-ggaaaagcaaggaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggagcagataatgcatggcctgcgtcccttggtaaggatactaaattgtgtcctcggtgtgtt----------aggaa-----------------gttactagagtgctttgagcaggggatcagtaagatatgaact--atttc-aaaaaaatttctctgacaactgtgtgaagaataagctatg--- s panTro5.chr18 65088586 407 + 78221452 gaaggtaataaagcagattaagaagcaaaagaaacactgaaatgctaatttagagatccttctt-ctgggtgatatttgagccgggaccaaaagaagtgacagaataaggcaagagaatttca-gtcgatacatcagctga----------gacacaggcctggagaca--gaagtgcctagtgagac-----tga-ggaaaagcaaggaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggttttggagaagtaac-taaggagcagataatgcatggcctgcgtcccttggtaaggatactaaattgtgtcctcggtgtgtt----------aggaa-----------------gttactagagtgctttgagcaggggatcagtaagatatgaact--atttc-aaaaaaagttctctgacaactgtgtgaagaataagctatg--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207494 407 + 77229886 gaaggtaataaagcagattaagaagcaaaagaaacactgaaatgctaatttagagatccttctt-ctgggtgatatttgagccgggaccaaaagaagtgacagaataaggcaagagaatttca-gtcgatacatcagctga----------gacacaggcctggagaca--gaagtgcctagtgagac-----tga-ggaaaagcaaggaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggttttggagaagtaac-taaggagcagataatgcatggcctgcgtcccttggtaaggatactaaattgtgtcctcggtgtgtt----------aggaa-----------------gttactagagtgctttgagcaggggatcagtaagatatgaact--atttc-aaaaaaagttctctgacaactgtgtgaagaataagctatg--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5427021 407 + 17472758 gaaagtaataaagcagatcaagaagcaaaagaaacactgaaatgctaatttagagatccttctt-ctgggtgatatttgagccgggaccaaaagaagtgacagaataaggcaagagaatttca-gtcgatacatcagctga----------gacacaggcctggagaca--gaagtgcctagtgagac-----tga-ggaaaagcaaggaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggagcagataatgcatggcctgcgtcccttggtaaggatactaaattgtgccctcagtgtgtt----------aggaa-----------------gttactagagtgctttgagcagggtatcggtaagatatgaact--atttc-aaaaaaatttctctgacaactatgtgaagaataagctatg--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467524 407 - 152096393 gaagataataaagcagattaagaagcaaaagaaacactgaaatgctaatttagagatccttctt-gggggtgatagttgagccgggaccaaaagaagtgacagaataaggcaagagaatttca-gtcgatacatcagctga----------gacacaggcctggagaca--gaagtgcttagtgagac-----tga-ggaacagcaaggaagccagtgcacctgga------aagcatttggaagatgtgaggt-tgaggatttggagaagtaac-taaggaacagataatgcatggcctgtgtcccttggtaaggatactaaattgtgtcctccgtgtgtt----------aggaa-----------------gttactagagtgctttaagcaggggatcagtaagatacgaact--atttc-aaaaaaatttctctgacaactatgtgaagaactagctatg--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417297 408 + 70235451 aaagataataaagcaaattaagaaccaaaagagacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggcgagagaatttca-attgatacatcagctga----------gacacaggcctggagaga--gaagtgcttggtgagac-----tga-ggaacagcaagaaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatcccttggtaaggatactaaattgtgtcctcagtgtgtt----------aggaa-----------------gttactagagtgctttgagcagaggaccagcaagatacgaatt--atttc-aaaaatatttctctgacaactaagtgaagaataagctatg--- i rheMac8.chr18 C 0 I 5 s macFas5.chr18 63108615 409 - 75711847 aaagataataaagcaaattaagaaccaaaagagacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggcgagagaatttca-attgatacatcagctga----------gacacaggcctggagaga--gaagtgcttggtgagac-----tgagggaacagcaagaaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatcccttggtaaggatactaaattgtgtcctcagtgtgtt----------aggaa-----------------gttaccagagtgctttgagcagaggaccagcaagatacgaatt--atttc-aaaaatatttctctgacaactaagtgaagaataagctatg--- i macFas5.chr18 C 0 I 5 s macNem1.NW_012016688v1 13667941 408 - 18804593 aaagataataaagcaaattaagaaccaaaagagacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggcgagagaatttca-attgatacatcagctga----------gacacaggcctggagaga--gaagtgcttggtgagac-----tga-ggaacagcaagaaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatcccttggtaaggatactaaattgtgtcctcagtgtgtt----------aggaa-----------------gttactagagtgctttgagcagaggaccagcaagatacgaatt--atttc-aaaaatatttctctgacaactaagtgaagaataagctatg--- i macNem1.NW_012016688v1 C 0 I 5 s cerAty1.NW_012001075v1 13279767 408 + 18905526 aaagataataaagcaaattaagaaccaaaagagacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggcgagagaatttca-attgatacatcagctga----------gacacaggcctggagaga--gaagtgcttggtgagac-----tga-ggaaaagcaagaaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatcccttggtaaggatactaaattgtgtcctcagtatgtt----------aggaa-----------------gttactagagtgctttgagcagaggaccagcaagatacgaatt--atttc-aaaaatatttctctgacaactaagtgaagaataagctatg--- i cerAty1.NW_012001075v1 C 0 I 5 s chlSab2.chr18 60108604 408 - 72318688 aaagataattaagcaaattaagaagcaaaagaaacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggcaagagaatttca-gtcgatacatcagctga----------gacacaggcctggagaga--gaagtgcttagtgagac-----tga-ggaaaagcaagaaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatctcttggtaaggatactaaattgtgtcctcggtgtgtt----------aggaa-----------------gttactagagtgctttgagcagaggaccagcaagatatgaact--atctc-aaaaatatttatctgacaactaagtgaagaataagctatg--- i chlSab2.chr18 C 0 I 5 s manLeu1.NW_012106698v1 445105 408 - 1517660 aaagataataaagcaaattaagaaccaaaagagacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggtgagagaatttca-attgatacatcagctga----------gacacaggcctggagaga--gaagtgcttggtgagac-----tga-ggaaaagcaagaaagccagtgcacctgga------aagcatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatcctttggtaaggatactaaattgtgtcctcagtgtgtt----------aggaa-----------------gttactagagtgctttgagcagaggaccagcaagatacaaatt--atttc-aaaaatatttctctgacaactaagtgaagaataagctatg--- i manLeu1.NW_012106698v1 C 0 I 5 s colAng1.NW_012115433v1 3540981 408 + 6513552 aaagacaataaagcaaattaagaagcaaaagaaacactgaaatgctaatttagagatccttcttggggggtgatatttgagccaggaccaaaagaaatgtcagaataaggcgagagaatttca-gtcgatacatcagctga----------gatacaggcctggagaga--gaagtgcttagtgagac-----tga-ggaaaagcaaggaagccagtgcacctgga------aaacatttggaggatgtggggt-tgaggatttggagaagtaac-taaggaccagataatgcatagcctgcatcccttggtaaggatactaaattgtgtcctcggtgtgtt----------aggaa-----------------gttactagagtgctttgagcagatgaccagcaagatatgaact--atttc-aaaaatatttctctgacaactaagtgaagaataagctatg--- i colAng1.NW_012115433v1 C 0 I 5 s calJac3.chr13 105312662 409 + 117903854 gaagataataaagcagattaagaagccacagaaacactgaaatgctaatttagaggttcttcttgtggggtgatatttgagccgggaccaaaggaagtgacagaacgaggcaagataatttca-gtaaatggatcagctga----------gacacaggcctggagatg--ggagtgcttagtgagac-----tta-ggaaaagcaaggaaaccagtgcacctgga------aagcttttagaggatgtggggtatgaagatttggagaagtaac-taaggaccaggtaatgcacagcctgcgttctttggtaaggatgctaaattgtgtctccgatgtgtt----------aggaa-----------------gatattagagtgctttgagcaggggggcagcaagatgcgaact--atttc-aaaaaaatttctctgactactatgtgaagaataagatatg--- i calJac3.chr13 C 0 I 6 s saiBol1.JH378121 19499692 366 - 31320352 gaagataataaagcagattaagaagCCACAGAAAC--------------------------------------------AGCCAGGACCAGATGAAGTGACAGAACAAggcaagagaatttca-gtaaatggatcagctga----------gacataggcctggagatg--ggagtgcttagtgagac-----tga-ggaaaagcaaggaaaccagtgcacctgga------aagcatttagaggatgtggagtatgaagatttggggaggtaac-taaggaccaggtaatgcatggcctgcgttccttggtaaggatactaaattgtgtcttcggtgtgtt----------tggaa-----------------gatattagagtgctttgagcagggaagcagcaagatatgaact--atttcaaaaaaaatttctctgactactgtgtgaagaataaggtatg--- i saiBol1.JH378121 C 0 I 6 s cebCap1.NW_016107689v1 1695196 406 + 2203405 gaagataataaaacagattaagaagccacagaagcactgaaatgctaatttagaggttcttcttggggggtgatatctgagccgggaccaaacg--gtgacagaacaaggcacgataatttca-gtaaatggatcagctga----------gacacaggactggagatg--ggagtgcttagtgagac-----tga-ggaaaagcaaggaagccagtgcacctgga------aagcatttagaggatgtggggtatgaagatttggagaagtaac-taaggaccaggtaatgcatggcctgcgttccttggtaaggatattaaattgtgtcttcagtgtgtt----------tggaa-----------------gatattagagtgctttgagcaggggagcagcaagatatgaact--attt--aaaaaaaattctctgaatactatgtgaagaataaggtatg--- i cebCap1.NW_016107689v1 C 0 I 17 s aotNan1.NW_018502140v1 3647580 410 - 14941987 gaagataatgaagcagattaagaagccacagaaacactgaaatgctaatttagaggttcttcttggggggtgatatttgaaccgggaccaaacgaagtgacagaacaaggcaagagaatttca-gtaaatggatcagctga----------gacacaggcctggagatg--ggagtgcttagtgagac-----tgc-ggaaaagcaaggaagccagtgcacctgga------aagcatttagaggatgtggggtatgaagatttggagaagtaacttaaggaccaggtaatgcatggcctgtgttccttggtaagggtactaaattgtgtctttggtgtgtt----------tggaa-----------------gatattagagtgctttgagcaggggagcagcaagatatgaact--atttc-aaaaaattttctctgactactatgtgaagaataagataag--- i aotNan1.NW_018502140v1 C 0 I 3 s micMur3.chr19 41560172 409 + 83067054 gaagataataaaacagatcaagtagcaacagaagcactgaaatgctaatttagaggcttctcctagggagcaatatttgagcagagaccaaaagaagtgacagaa-aaggcaagaaaatttcaggctgatgcgtcagctgg----------tgca-aagcccagagacaaggaagtacttagtgagac-----tga-ggaaaagcaaggaatccagtgcacttgga------gggcatttggaggatgtggca--tgagcatttggaaacataaa-tgaggaccaggtaatgtatggcctgcgtcccctggttaggatactagattgtctccttggtgtgat----------aggaa-----------------attattagagtgttttgatcagaggactggcaagatctgaact--gtttcaaaaaacaattctctgacaagtgtgtggtgaataagcaatg--- i micMur3.chr19 I 152 I 5 s otoGar3.GL873546 11273292 414 - 20685099 GAAGATAATAAAA-AGATTAAGTAGTAACAGAGGCACTAGATTGCTAACCC-----CTTCTCTGAGGGAGCAATATTTGAGCAGAGACCAGGGGAAGTGTCAGAAGAAGACaagaaaatgtcaggttgatgcaccagctgg----------tgca-aggcctggagacacaggagaccttagtgggactgagatga-gataagaccaggaagccagcacacctgga------tggcagttagaggatgtaggg--tgaggatttggagacacaac-caaggaccagataat-----------attccctggtaaagatattagattgcatccttggcgtgattcttattccctgaaaacagctccctcctctccattattaaagagctttgagcagaggactgctaagatctt-------------aaaacattcctttaacaaccatgtgaagaataaactatg--- i otoGar3.GL873546 I 4 I 5 s canFam3.chr1 112350927 412 - 122678785 ---gaaaataaagccaatgaaggagcaa-ataagccctggaatgctaatttggagacctctcca-aggggtgatatttgagcagagatgaaaagaagttataaaacacagtaagagaatttcaggcctaaggatcagctagctgctgcactgacacagagtcgga------gcaatgctgagtg-gcc-----cga-gaaacagcaaggaagccagtgtgactaaggtgcatatgcatatggaagatgtagggcacggggacttgaagacatagc-caggcattacacagaacatggcctgtggctgcagggaaggtcacaggattgtatcctcggtgtgat----------gggaa-----------------gcgatgagggttttttgatca-agaactggaaagtcctgaaccgggtttc-caaagaatttctctgaca--------gagaataaactagggtg i canFam3.chr1 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=78176.000000 s hg38.chr18_GL383571v1_alt 178954 10 + 198278 --aaaaga------gcag s panTro5.chr18 65088993 10 + 78221452 --aaaaga------gcag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207901 10 + 77229886 --aaaaga------gcag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5427428 10 + 17472758 --aaaaga------gcag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467931 10 - 152096393 --aaaaga------gcag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417710 10 + 70235451 --aaaaga------gtgg i rheMac8.chr18 I 5 C 0 s macFas5.chr18 63109029 10 - 75711847 --aaaaga------gtgg i macFas5.chr18 I 5 C 0 s macNem1.NW_012016688v1 13668354 10 - 18804593 --aaaaga------gtgg i macNem1.NW_012016688v1 I 5 C 0 s cerAty1.NW_012001075v1 13280180 10 + 18905526 --aaaaga------gtgg i cerAty1.NW_012001075v1 I 5 C 0 s chlSab2.chr18 60109017 10 - 72318688 --aaaaga------gcgg i chlSab2.chr18 I 5 C 0 s manLeu1.NW_012106698v1 445518 10 - 1517660 --aaaaga------gtgg i manLeu1.NW_012106698v1 I 5 C 0 s colAng1.NW_012115433v1 3541394 10 + 6513552 --aaaaga------gcgg i colAng1.NW_012115433v1 I 5 C 0 s calJac3.chr13 105313077 10 + 117903854 --aaaaaa------gtga i calJac3.chr13 I 6 C 0 s saiBol1.JH378121 19500064 16 - 31320352 --aaaaaaaaaaaggtat i saiBol1.JH378121 I 6 C 0 s aotNan1.NW_018502140v1 3647993 9 - 14941987 ---aaaaa------ataa i aotNan1.NW_018502140v1 I 3 I 4 s micMur3.chr19 41560586 10 + 83067054 --aaaaga------ctgg i micMur3.chr19 I 5 C 0 s otoGar3.GL873546 11273711 10 - 20685099 --aaaaga------gtgg i otoGar3.GL873546 I 5 C 0 s canFam3.chr1 112351339 12 - 122678785 aaacaaga------ctga i canFam3.chr1 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e cebCap1.NW_016107689v1 1695602 17 + 2203405 I a score=2667262.000000 s hg38.chr18_GL383571v1_alt 178964 213 + 198278 catcaggaaaacccaagcaggatgtagaaattagtaa-ttttgcatgacgtaaaggtccagagcatgaccagagat-----ggagtagaggATAAATTCATTGGAATGTGGTGTTCAAGGAGCTTAGAGGCTGTGAAAGTTTCACCCACACAGAAGTGTGCAGGAATTGGATGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCCCTAATGA s panTro5.chr18 65089003 213 + 78221452 catcaggaaaacccaagcaggatgtagaaattagtaa-ttttgcatgatgtaaaggtccagagcatgaccagagat-----ggagtagaggATAAATTCATTGGAATGTGGTGTTCAAGGAGCTTAGAGGCTGTGAAAGGTTCACCCACACAGAAGTGTGCAGGAATTGGATGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTACTTAATGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64207911 213 + 77229886 catcaggaaaacccaagcaggatgtagaaattagtaa-ttttgcgtgatgtaaaggtccagagcatgaccagagat-----ggagtagaggataaattcattggaatgtggtgttcaaagagcttagaggctgtgaaaggttcacccacacagaagtgtgcaggaattggatgggagtaTTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCCTTAATGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5427438 213 + 17472758 catcaggaaaaccggagcaggatgtagaaattagtaa-ttttgcatgacgtaaaggtccagagcatgaccagaggt-----ggagtggaggATAAATTCACTGGAATGTGGTGTTCAAGGAGCTTAGAGGCTGTGAAAGGTTCACCCACACAGAAGTGTGCAGGAATTGGATGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139467941 225 - 152096393 catcaggaaaacTTGAGCAGGatgtagaaattagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagtagaggataaattcattggaatgtggtgttcagggagctgagaggctgtgaaaggttcacccacatagaactgtgcaggaattggatgggagtaTTTCACCTTTGAGGAGGAATCACCTCCTCCTCACCTGTGAGGTCCCTAATGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417720 213 + 70235451 catcaggaaaacctgagcaggatgtagaaattagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagtagaggATAAATTCATTGGAATGTGGTGTTCAAGGAGCTGAGAGGCTGTGAAAGGTTCACCCACACAGAACTGTGCAGGAATTGGGTGGGAGTATTTCACCCGTAAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63109039 212 - 75711847 catcaggaaaacctgagcaggatgtagaaattagtaa-ttttgcatgatgaaaaggt-cagagcatgaccaggggt-----ggagtagaggataaattcattggaatgtggtgttcaaggagctgagaggctgtgaaaggttcacccacacagaACTGTGCAGGAATTGGGTGGGAGTATTTCACCCGTAAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13668364 213 - 18804593 catcaggaaaacctgagcagggtgtaggaattagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagtagaggataaattcattggaatgtggtgttcaaggagctgagaggctgtgaaaggttcacccacacagaactgtgcaggaattgggtgggagtaTTTCACCCATAAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13280190 213 + 18905526 catcaggaaaacctgaggaggatgtagaaattagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagtagaggataaattcattgcaatgtggtgttcaaggagctgagaggctgtgaaaggttcacccacacagaactgtgcaggaattgggtgggagtaTTTCACCCATAAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60109027 213 - 72318688 catcaggaaaacctgagcaggatgtagaaaggagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagtagaggatcaattcattggaatgtggtgttcaaggagctgagaggctgtgaaaggttcacccacacagaAGTGTGTAGGAATTGGGTGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 445528 213 - 1517660 catcaggaaaatctgagcaggatgtagaaattagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagtagaggATAAATTCATTGGAATGTGGTGTTCAAGTAGCTGAGAGGCTGTGAAAGGTTCACCCACACAGAACTGTGCAAGAATTGGGTGGGAGTATTTCACCCGTAAGGAGGAATCA------------TGGTGAGGTCCCTATTGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3541404 213 + 6513552 catcaggaaaacccgagcaagatgtagaaattagtaa-ttttgcatgatgaaaaggtccagagcatgaccagaggt-----ggagcagaggataaattcattggaatgtggcgttcaaggagctgagaggctgtgaaaggttcacccacacagaattgtgcaggaattgggcgggagtaTTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCCCTAATGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105313087 213 + 117903854 catcagaaaaacccgagcaggatatAGAAATTAGTCA-TTTTGCATGTtgtcaaggtccagagcatgaccagaggt-----ggagtagaagataaactcactggaaagtggtgttcaaggagctgagaggctgtgaaatgttcacccatgcagaAGTGTGCAGAAATTGGTTGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCCCCAGTGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19500080 213 - 31320352 catcaggaaaacccaagcaggatgtagaaattagtaa-ttttgcatgatgtaaaggtccagagcatgaccagaggt-----ggagtagaggataaatttactggaaagtggtGTTCAAGGAGCTGAGAGGCTGTGAAAGATTCACCCATGCAGAAGTGTGCAGAAATTGGTTGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGGGGTCCCCAGTGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695619 213 + 2203405 catcaggaaaaccTGAGCAGGatgtagaaattagtaa-ttttgcatgatgtaaatgtccagagcatgaccagaggt-----ggagcagaggataaattcactggaaagtggtgttcaaggagctgagaggctgtgaaagattcacccatgcagaAGTGTGCAGAAATTGGTTGGGAGTCTTTTACCTGTGAGGAGGAATCA------------TGGTGAGGTCCCCAGTGA i cebCap1.NW_016107689v1 I 17 C 0 s aotNan1.NW_018502140v1 3648006 213 - 14941987 catcaggaaaaccctagcaggatgtagaaattagtaa-ttttgcatgatgtaaaggtccagagcatgaccaaaggt-----ggagtagaggATAAATTCACTGGAAAGTGGTGTTCAAGGAGCTGAGAGGCTGTGAAAGGTTCACTCATGCAGAAGCGTGCAGAAATTGGTTGGGAGTATTTCACCTGTGAGGAGGAATCA------------TGGTGAGGTCcccagtga i aotNan1.NW_018502140v1 I 4 C 0 s micMur3.chr19 41560596 208 + 83067054 catcagggaaaccagaacaggatacagtaatTAGTGATTTTTGTGTTATGAGAAAGTCCAGAGCCTGACCATA----------GGCAGAGGATAATTTAATTGGAATGTGATGTTCAAGGAGCTGAGA-GCCATGAAAGGTTCATCCATGAAAATGTTTACAGGAATTGGCTGGGAGTCTTCCACAGGTGATGAGGGATCA------------TGGTGAGGTCCCTAGTGA i micMur3.chr19 C 0 I 1033 s otoGar3.GL873546 11273721 212 - 20685099 tacctggaaaatcagaacaggatacggtaatTAGTGA-TTTTGTGTAATGAGGAGGTCCAGAGCATGG-CATATGT-----AGGGCAGAGGGTACATGTGTTGGAATGTGATGCTCGGGCTGCTGAGAGGCCACTGAAGGTTCGTCCATCCAGATGTTTGCAGGAATTGCACGGGAGTCTTCCACAGGTGGGGAGGAATCG------------GGGTGAAGGCCATAATGG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112351351 218 - 122678785 ctccaggaaaaccagAGCAGCATGTAGAAATCAGTAA-CTTTGCGTGATGCAAAGGCCCTAAGCATGATGATAGGTACGGAAGATCAGAAGAGAAGTTCATTGGAATGTGGTATTCCAGGAGCAAAAAGGCCATGGAAGCTTCATCCACATGACTGTGTGCAAGAACTGGGTTTGAATATTCCGCAGATGATGAAGAGTCA------------CCTTGAGGTCCTTGAGTA i canFam3.chr1 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=252721.000000 s hg38.chr18_GL383571v1_alt 179177 20 + 198278 AAACCATGAGGGACAGAAT------G s panTro5.chr18 65089216 26 + 78221452 AAACCATGAGGGACAGAATGTGATAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64208124 26 + 77229886 AAACCATGAGGGACAGAATGTGATAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5427651 26 + 17472758 AAACCATGAGGGACAGAATGTGATAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139468166 26 - 152096393 AAACCATGAGAGACAGAATGTGATAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417933 26 + 70235451 AAACCATGAGGGATAGAATGTGATAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63109251 26 - 75711847 AAACCATGAGGGATAGAATGTGATAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13668577 26 - 18804593 AAACCATGAGGGATAGAATGTGATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13280403 26 + 18905526 AAACCATGAGGGACAGAATGTGATAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60109240 26 - 72318688 AAACCATGAGAGACAGAATGTGATAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 445741 26 - 1517660 AAACCATGAGGGACAGAATGTGATAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3541617 26 + 6513552 AAACCATGAGAGATAGAATGTGATAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105313300 26 + 117903854 AAACCATATGGGATAGAATGTGATAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19500293 26 - 31320352 AAACCTTGTGGGACAGAATGTGGTAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695832 26 + 2203405 AAACCAGGTGGGACAGAATGTGATAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3648219 26 - 14941987 aaaccatgtgggacagaaagtgatag i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11273933 19 - 20685099 -CATCTGGAGGGGCAGAATG------ i otoGar3.GL873546 C 0 I 521 s canFam3.chr1 112351569 11 - 122678785 ---------------GAATGTGATAG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I a score=379339.000000 s hg38.chr18_GL383571v1_alt 179197 38 + 198278 AATTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa s panTro5.chr18 65089242 38 + 78221452 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64208150 38 + 77229886 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5427677 38 + 17472758 AATTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139468192 38 - 152096393 ACTTGCATAG-GTAATACCCAAAGA---------GCTcaaaaacaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417959 38 + 70235451 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63109277 38 - 75711847 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13668603 38 - 18804593 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13280429 38 + 18905526 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60109266 38 - 72318688 AGTTGAAtag-gtaataccccaaga---------gctcaaaaacaaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 445767 38 - 1517660 AGTTAAAtag-gtaataccccaaga---------gctcaaaaacaaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3541643 37 + 6513552 AGTGGAA-Ag-gtaataccccaaga---------gctcaaaaacaaaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105313326 38 + 117903854 AGTTTAAtag-gtaataccccaaaa---------acttaaaaacaaaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19500319 38 - 31320352 AGTTTAAtag-gtaataccccaaaa---------gcttaaaaacaaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695858 38 + 2203405 AGTTTAAtag-gtaacaccccaaaa---------gcttaaaaacaaaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3648245 38 - 14941987 agtttaatag-ataataccccaaaa---------gcttaaaaacaaca i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112351580 48 - 122678785 CACTGAATAGTACGATTTCCCAGGAAAAGGTGTTGTTCAAGAACAGGA i canFam3.chr1 C 0 I 369 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e otoGar3.GL873546 11273952 521 - 20685099 I a score=7758987.000000 s hg38.chr18_GL383571v1_alt 179235 798 + 198278 atagacaaatgggactatattaaactaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaaatatttgccaattattcatctgacaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaatcaaattactccattaaa---------aaggacatggaaagacgtgtactt-aaaaagacataaaaatgtacagcaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgaaaaccaaatgacaatgagatattatcttaccctagttagaatgactattatcaataagacaacaaataagagatgttagtgagggtgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacaatacggagacttctcaaaaaacttaaaatagaactgccacatgatttagcaatccctctac----tatttatacaaaataaaagaaattagtatatcaaaggcataccttcatcgacatgtttattgaagcacgattcacaatcaagctaagtgtctatcattggacaaatgaataaagaaaacatgtacatacacaatggaatagtattcagccgt--aaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttagctgaaatgagccaggcacagaaagacaaatatcacatgttctcattcacgtgggagct-aaaaaagttgatctcatagtggtgtggtatagaat s panTro5.chr18 65089280 803 + 78221452 atagacaaatgggactatattaaactaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaaaaacctgttgaatgagagaaaatatttgccaattattcatctgacaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaatcaaattactccattaaa---------aaagacatggaaagacacgtactt-aaaaagacataaaaatgtacaacaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgaaaaccaaatgacaatgagatattgtcttaccctagttagaatgactattatcaataagacaataaataacagatgttagtgaggatgtaaagaaaactcttatacactattggtatggatgtaaattagtacaaacactatggaaaacagtatggagacttctcaaaaaacttaaattagaactgccacatgatttagcaatcccactactgagtatttatacaaaggaaaagaaattaatatatcaaaggcataccttcattgacatgtttattgcagcacgattcacaatcaagctaagtgtttatcattggacaagtgaataaagaaaacatgtacatacacaatggaatagtattcagctgt--aaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaggtcattgagttagctgaaataagccaggcacagaaagacaaatatcacatgttctcatttacgtgggagctaaaaaaaattgatctcatagtggtgtggtatagaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64208188 802 + 77229886 atagacaaatgggactatattaaactaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaaaaacctgttgaatgagagaaaatatttgccaattattcatctgacaagggactaatatctagaatgtacaagaaactcaaacaactcatcagtaaaaaatcaaattactccattaaa---------aaggacatggaaagacacgtactt-aaaaagacataaaaatgtacaacaggtatatgaaaaatgctccacattgctaatcgtcaaggaaatgaaaaccaaatgacaatgagatattgtcttaccctaattagaatgactattatcaataagacaataaataacagatgttagtgaggatgtaaagaaaactcttatacactattggtatggatgtaaattagtacaaacactatggaaaacagtatggagacttctcaaaaaacttaaaatagaactgccacatgatttagcaatcccactactgagtatttatacaaaggaaaagaaattaatatatcaaaggcataccttcattgacatgtttattgcagcacgattcacaatcaagctaagtgtttatcattggacaagtgaataaagaaaacatgtacatacacaatggaatagtattcagctgt--aaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaggtcattgagttagctgaaataagccaggcacagaaagacaaatatcacatgttctcattcacgtgggagct-aaaaaaattgatctcatagtggtgtggtatagaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5427715 802 + 17472758 atagacaaatgggactatcttaaactaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaaatatttgccaattattcatctgacaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaactcaaattactccattaaa---------aaggacatggaaagacgtgtactt-aaaaagacataaaaatgtacaacaggtatatgaaaaatgctgcacattgctaatcatcaaggaaatgaaaaccaaatgacaatgagatattatcttaccctagttagaatgactattatcaataagacaacaaataagagatgttagtgagggtgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacagtatggagacttctcaaaaaacttaaaatagaactgccacatgatttagcaatcccactagtgagtatttatacaaaagaaaagaaattagtatatcaaaggcataccttcattgacatgtttattgaagcacgattcacaatcaagctaagtgtctatcattggacaaatgaataaagaaaacatgtacatacacaatggaatagtattcagccgt--aaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttagctgaaataagccaggcacagatagacaaatatcacatgttctcattcacgtgggagct-aaaaaagttgatctcatagtggtgtggtatagaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139468230 798 - 152096393 atagacaaatgggactatattaaactaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaaatatttgccaattattcatctgacaagggactaatatctagaatgtacaagaaact----caactcaacactaaaaaatcaaattactccattaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtatatgaaaaatgtcccacattgctaatcatcaaggaaatgcaaaccaaatgacaatgagatattatcttaccctagttagaataactattatcaataagacaacaaataacagatattagtgaggatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacagtatggagacttctcaaaaaacttaaaatagaactgccacatgatctagcaatcccactactgagtatttacacaaaggaaaagaaattagtatatcaaaggcataccttcactgacatgtttattgcagcacgattcacaatcaagctaagtgtttatcattggacaaattaataaagaaagcatgtacatacacaatggaatagtattcagccat--aaaaaagaatgaaatcctgtcatctgaagcagtgcagatggaattggaagtcattgagttagctgaaataagccaggcccagaaagacaaatatcacatgttctcattcatgcgggagct-aaaaaagttgatcttatagtgatgtggtatagaat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57417997 803 + 70235451 atagacaaatgggagtatgttaaatgaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaactatttgccaattattcatctgaaaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaatcaaattactccatcaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtttatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaatgacaatg-gatattatcttatcctagttagaatgactattattaataagacaacacatcacagatactagtgaagatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacagtatggagccttctcaaaaaacctaaaatagaactgccacatgatctagcaataccactactgagtatttatacaaaggaaaagaatttagtatatcaaaggcataccttcattgacatgtttattgtagcataattcacaatcaagctaagtgtttatcattggacaaatgaataaagaaaacatgtacacacacaagagaatagtattcagacataaaaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttcggtgaaataagccaggcacagaaagacatatatcacatgttctcattcacatgggagct-aaaaaagttgatctcatagtggtgtggtatagaat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63109315 802 - 75711847 atagacaaatgggagtatgttaaatgaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaactatttgccaattattcatctgaaaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaatcaaattactccatcaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtttatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaatgacaatg-gatattatcttatcctagttagaatgactattattaataagacaacacatcacagatactagtgaagatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacagtatggagccttctcaaaaaacctaaaatagaactgccacatgatctagcaataccactactgagtatttatacaaaggaaaagaatttagtatatcaaaggcataccttcattgacatgtttattgtagcataattcacaatcaagttaagtgtttatcattggacaaatgaataaagaaaacatgtacacacacaagagaatagtattcagacat-aaaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttcggtgaaataagccaggcacagaaagacatatatcacatgttctcattcacatgggagct-aaaaaagttgatctcatagtggtgtggtatagaat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13668641 802 - 18804593 atagacaaatgggagtatgttaaatgaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaactatttgccaattattcatctgaaaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaatcaaattactccatcaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtttatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaatgacaatg-gatattatcttatcctagttagaatgactattattaataagacaacacatcacagatactagtgaagatgtaaagaaaactcttatacactattggtgtggatgtaaattagcacaaccactatggaaaacagtatggagccttctcaaaaaacctaaaatagaactgccacatgatctagcaataccactactgagtatttatacaaaggaaaagaatttagtatatcaaaggcataccttcattgacatgtttattgtagcataattcacaatcaagctaagtgtttatcattggacaaatgaataaagaaaacatgtacacacacaagagaatagtattcagacat-aaaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttcggtgaaataagccaggcacagaaagacatatatcacatgttctcattcacatgggagct-aaaaaagttgatctcatagtggtgtggtatagaat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13280467 799 + 18905526 atagacaaatgggagtatgttaaatgaagaagcttctgcgcagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaaccatttgccaattattcatctgaaaagggactaatatctagaatgtacaagaaacacaaacaactcaacagtaaaaaatcaaattactccatcaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtttatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaatgacaatg-gatattatcttatcctagttagaatgactattattaataagacaacaaatcacagatactagtgaagatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacagtatggagccttctcaaaaaacctaaaatagaactgccacatgatctagtaataccactactgagtatttatacaaaggaaaagaatttagtatatcaaaggcataccttcattgacatgtttattgtagcataattcacaatcaagctaagtgtttatcattggacaaatgaataaagaaaacatgtacacacacaagagaatagtattcagacat----aaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttcggtgaaataagccaggcacagaaaaacatatatcacatgttctcattcacatgggagct-aaaaaagttgatctcatagtggtgtggtatagaat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60109304 803 - 72318688 atagacaaatgggagtatattaaatgaagaagcttctgcacagcaaaggaaacaagcaacagaatcagaaaacaacctgttgaatgagagaaactatttgccaattactcatctgaaaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaaccaaattactccattaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtatttgaaaaatgctccacaatgctaatcatcaaggaaatgcaaaccaaatgacaatgagatattatcttatcctagttagaatgactattattaataagacaacaaatcacagatactagtaaggatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccaccatggaaaacagtatggagccttctcaaaaaacctaaaatagaactgccacatgatctagcaatcccactactgagtatttatacaaaggaaaagaaatcagtgtatcaaaggcataccttcattgacatgtttattgcagcacgattcacaatcaagctaagtgtttatcactggacaaatgaataaagaaaacatgtacacacataatggaatagtattcagacat-aaaaaaagaatgaaatcctgtcatctgcagcagtgcagatgcaactggaagtcattgagttcggtgaaataagccaggcacagaaagacatatatcacatgttctcattcacgtgagagct-aaaaaagttgatctcatagtgttgtggtatagaat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 445805 802 - 1517660 atagacaaatgggagtatgttaaatgaagaagcttctgcacagcaaaggaaacaagcaacagaatgagaaaacaacctgttgaatgagagaaactatttgccaattattcatctgaaaagggactaatatctagaatgtacaagaaactcaaacaactcaacagtaaaaaatcaaattactccatcaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtttatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaatgacaatg-gatattaacttatcctagttagaatgactattattaataagacaacaaatcacagatactagtgaagatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaaccactatggaaaacagtatggagccttctcaaaaaacctaaaatagaactgccacatgatctagtaataccactactgagtatttatacaaaggaaaagaatttagtatatcaaaggcacaccttcattgacatgtttattgtagcataattcacaatcaagctaagtgtttatcattggacaaatgaataaagaaaacatgtacacacacaagagaatagtattcagacat-aaaaaaagaatgaaattctgtcatctgcagcagtgcagatggaattggaggtcattgagttcggtgaaataagccaggcacagaaagacatatatcacatgttctcattcacatgggagct-aaaaaagttgatctcatagtggtgtggtatagaat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3541680 796 + 6513552 atagacaaatgggagtatattaaat---gaagtttctgcacagcaaaggaaacaaacaacagaatgagaaaacaacctgttgaatgagagaaactatttgccaattattcatctgaaaagggactaatatctagaatgtacaagaaactcaaacaacgcaacagtaaaaaatcaaattactccattaaa---------aaggacatggaaagacatttactt-aaaaagacataaaaatgtccaacaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaatgacagtgagatattatcttatcctagttagaatgactattat---taagacaacaaatcacagatactagtgaggatgtaaagaaaactcttatacactattggtgtggatgtaaattagtacaa-tactatggaaaacagtatggagccttctctaaaaacttaaaatagagctgccacatggtctagcaatcccactactgagtatttatacaaaggaaaagaaattagtataacaaaggcataccttcattgacatgtttactgcagcacgattcacaatcaagctaagtgtttatcattggacaaatgaataaagaaaacatgcacacacacaatggaatagtattcagacat-aaaaaaagaatgaaatcctgtcatctgcagcagtgcagatggaattggaagtcattgagttcggtgaaataagccaggcacagaaagacatatatcacatgttctcattcacatgggagct-aaaaaagttgatctcatagtggtgtggtacagaat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105313364 806 + 117903854 atagacacatgggattatattaaattaagaaacttctgcacagcaaaggaaacaagcaatagaatgagaaaataacttgttgcatgggagaaaatatttgcctgttattcatctcacaaggggttaatatctagaatgtgcaaaaaactcaaacaactcaaca-tacaaaattaaattattccattaaaaagtgggccaaggacatggaaagacatttatttaaaaaagacataaacatatccaacaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaacgacaatgaggtattatcttaccttagttagaatggcttttatcaattagacaacaaataacagatactagtgaggatgtaaagaaaactcttatatgcaattagtgtggatatacactgctacaaccactatgggaaacagtacggagacttctcaaaacacttcaaatagaactgccacatgatttagcaatcccactac----tatttatacaaaagaaaagaaattagtatatcaaaggcttacctgcattgacatgtttattgcagcatgattcacaatcaacctaaatgttcatgattggaaaaatgaataaagaaaacatgtacatacacaatgggacactattcagccac--aaaaaagaaagaga-tccaccatttgcagcagtgcagatgcaattggaagtcactgtgttaggtcaaataagccaggcacagaaagacaaatattacatgttctcattcatgtgggtgct-aaaaaagttgatatcatagtggtgtggtatagaat i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19500357 810 - 31320352 atagacacatgggattatattaaattaagaaacttctgcacagcaaagtaaacaagcgatagaatgagaaaagaacttgttgaatgggagaaaataattgccagttattcatttggcaaggggctaatacctagaatgtgcaagaaactcaaacaattcaaca-taaaaaatt-aattattccattaaaaagtgggccaaggacctggaaagacaattatttaaaaaagacataaacatgtccaacaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgcaaaccaaaggacaacaaggtattatcttaccttagttagaatggctattgtcaataagacaacaaataacagatactagtgaggatgtaaagaaaactcttatatgcaattagtgtggatgtaaactggtgcaaccactatgggaaacagtatggagactttgcaaaatacttcaaatagaactgccacatgatttagcaatcccactgctgagtatttatacaaaggaaaagaaactagtatatcaaaggcttacctgcattgacatgtttattgcagcatgattcacaatcaacctaagtgttcatcattggacaaatgaataaagaaaacatgtacatatacaatggaacactattcagccac--aaaaaagaaagagattctgtcatttgaagcagtgcagaggcaattggaagtcattgtgttaggtgaaataaggcaggcacagaaagacaaatattacatgctctcattcatgtgggagct-aaaaaagttggtatcatagtagtgtggtatagaat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1695896 810 + 2203405 atagacacatgggattatattaaattaagaaacttccacacagcaaaggaaacaagcaataaaatgagaaaacaacttgttgaatgggagaaaatatttgccaattattcatctgacaaggggctaatatctagaatgtgcaagaaactcaaacaactcaaca-tacaaaatt-aattattccattaaaaagtgggccaaggacatggaaagacatttatttaaaaaagacataaacatgtccaacaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgtaaaccaaatgacaatgaggtattatcttaccttagttaaaatggctattatcaataagacaacgaataacagatactagtgaggatgtaaagaaaactcttatatgcaattagtgtggctgtaaactggtacaacaactatgggaaacagtatggagacttctcaaaacacttcaaatagaactgccacatgatttagtaatcccattattgagtatttatacaaaggaaaacaaattagtatatcaaaggcttacctgcattgacatgtttattgcagcatgattcacaatcaacctaagtgttcatcattggacaaatgaataaagaaaacatgtacatacacaatggaacactattcagccat--gaaaaagaaagagatcctgtcatttgcagcagtacagatgcaattggaagtcattgtgttaggtgaaataaaccaggcacaggaagacaaatattacatgttctcattcatgtgggagct-aaaaaagttgatatcatagtggtgtggtatagaat i cebCap1.NW_016107689v1 C 0 I 19 s aotNan1.NW_018502140v1 3648283 811 - 14941987 atagacacatgggattatattaaattaagaaacttctgcacagcaaaggaaacaagcaatagaatgagaaaacaacttgttgaatgggagaaaatatttgccagttattcatctgacaaggggctaatatctagaatgtgcaagaaactcaaacaactcaaca-tacaaaattaaattattctattaaaaagtgggccaaggacatggaaagacatttatttaaaaaagacataaacttgtccaacaggtatatgaaaaatgctccacattgctaatcatcaaggaaatgcaaagcaaatgacaatgaggtattatcttaccttagttagaatggctattatcagtaagacaacaaagagcagatactagtgaggatgtaaagaaaactcttatatgcaattagtatggatgtaaactggtacaaccactatgggaaacagtatggagacttctcaaaacagttcaaatagaactgccacatgatttagcaatcccactactgagtatttatacaaaggaaaagaagttagtatatcaaaggcttacctgcattgacatgtttattgcagcatgattcacaatcaacctaagtgttcatcactggacaaatgaataaagaaaacatgtacatacacaatggaacactattcagccac--aaaaaagaaagagatcctgtcatttgcagcagtgcagatgcaattggaagtcattgtgttaggtgaaataagccaggcacagaaagacaaatattacatgttctcattcatgtggaagct-aaaaaagttgatctcatagtggtatggcatagaat i aotNan1.NW_018502140v1 C 0 I 25 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112351628 369 - 122678785 I e otoGar3.GL873546 11273952 521 - 20685099 I a score=82144.000000 s hg38.chr18_GL383571v1_alt 180033 12 + 198278 gatagataccag s panTro5.chr18 65090083 12 + 78221452 gatagataccag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64208990 12 + 77229886 gatagataccag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5428517 12 + 17472758 gatagataccag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469028 12 - 152096393 gatagataccag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57418800 12 + 70235451 gatagataccag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110117 12 - 75711847 gatagataccag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13669443 12 - 18804593 gatagataccag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281266 12 + 18905526 gatagataccag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110107 12 - 72318688 gatagataccag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 446607 12 - 1517660 gatagataccag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3542476 12 + 6513552 ggtagacaccag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314170 10 + 117903854 --cagacaacag i calJac3.chr13 C 0 I 9 s saiBol1.JH378121 19501167 10 - 31320352 --cagacaatag i saiBol1.JH378121 C 0 I 9 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112351628 369 - 122678785 I e otoGar3.GL873546 11273952 521 - 20685099 I e aotNan1.NW_018502140v1 3649094 25 - 14941987 I e cebCap1.NW_016107689v1 1696706 19 + 2203405 I a score=39035.000000 s hg38.chr18_GL383571v1_alt 180045 5 + 198278 agggt s panTro5.chr18 65090095 5 + 78221452 agggt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209002 5 + 77229886 agggt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5428529 5 + 17472758 agggt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469040 5 - 152096393 agggt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57418812 5 + 70235451 agcat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110129 5 - 75711847 agcgt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13669455 5 - 18804593 agggt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281278 5 + 18905526 agggt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110119 5 - 72318688 agggt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 446619 5 - 1517660 agggt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3542488 5 + 6513552 agggt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314189 5 + 117903854 agagt i calJac3.chr13 I 9 C 0 s saiBol1.JH378121 19501186 5 - 31320352 agagt i saiBol1.JH378121 I 9 C 0 s cebCap1.NW_016107689v1 1696725 5 + 2203405 agagt i cebCap1.NW_016107689v1 I 19 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112351628 369 - 122678785 I e otoGar3.GL873546 11273952 521 - 20685099 I e aotNan1.NW_018502140v1 3649094 25 - 14941987 I a score=2610675.000000 s hg38.chr18_GL383571v1_alt 180050 293 + 198278 gtgtggttgggaagcgggcatgaagaaaggttggttaattcgtacaaaaatgta-tta---gatagaagatataagttccaatgttcatagcagagtacagtgactatagttagcaatgatgtattatatatttcaaagtgactggaagagtggacttgaaatgttctcattccacagaagtgatatgtactccaggtgatggatactccaaataccctgatttaatcattaaatattttatacatgtaataaatacatgtaccacataaatgtataaaatattatgtatt-aatTTT s panTro5.chr18 65090100 292 + 78221452 gtgtggttgggaagcaggcatgaagaaaggttggttaattcgtacaaaaatata-tta---gatagaagatataagttctaatgttcatagcagagtacagtgactatagttagcaatgatgtattatatatttcaaagtgactggaagagaggacttgaaatgttctcagttcacagaagtgacatgtactccaggtgatggatactccaaataccctgatttaatcattaaat-ttttatacatgtaataaatacatgtaccctataaatgtataaaatattatgtatt-aatTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209007 292 + 77229886 gtgtggttgggaagcaggcatgaagaaaggttggttaattcgtacaaaaatata-tta---gatagaagatataagttctaatgttcatagcagagtacagtgactatagttagcaatgatgtattatatatttcaaagtgactggaagagaggacttgaaatgttctcagttcacagaagtgacatgtactccaggtgatggatactccaaataccctgatttaatcattaaat-ttttatacatgtaataaatacatgtaccctataaatgtataaaatattatgtatt-aatTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5428534 293 + 17472758 gtgtggttgggaagcgggcatgaagaaaggttggttaattcgcacaaaaatata-tta---gatagaagatataagttctaatgttcatagcagagtacagtgactatagttagcaatgatgtattatatatttcaaagtgactggaagattggacttgaaatgttctcaattcacagaagtgatatgtactccaggtgatggatactccaaataccctgatttaatcgttaaatattttatacatgtaataagtacatgtaccccataaacgtataaaatattatgtatt-aatTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469045 292 - 152096393 gtgtggttaggaagcaggcatgaagaaagattggttaattcgtacaaaaatata-ttagatgatagaagatataagttctaatattcatagcagagtacagtgactatagttagccatga-----tatatatttcaaagtgactagaagagaggacttgaaatgttctcaattcacagaagtgacatgtactccaggtgatggatactccaaataccctgatttaatcattaaacattttatgcatgtaataaatacaagtaccccataaatatataaaatattatgtattaaACTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57418817 288 + 70235451 gtgtggttgggaagtgggcaagaagaaaggttggttaattcgtacaaaactacagtta---gatagaagacataagttccaatgttcatagcagagtacagtgactgtagttagcaatgatgtattatatatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgacatgtacttcaggtaatggatactccaactaccctgatttaatcattaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110134 288 - 75711847 gtgtggttgggaagtgggcaagaagaaaggttggttaattcgtacaaaactacagtta---gatagaagacataagttccaatgttcatagcagagtacagtgactgtagttagcaatgatgtattatatatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgacatgtacttcaggtaatggatactccaactaccctgatttaatcattaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13669460 288 - 18804593 gtgtggttgggaagtgggcaagaagaaaggttggttaattcgtacaaaactacagtta---gatagaagacataagttccaatgttcatagcagagtacagtgactgtagttagcaatgatgtattatatatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgacatgtacttcaggtaatggatactccaactaccctgatttaatcattaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281283 286 + 18905526 gtgtggttgggaagtgggcaagaagaaaggttggttaattcgtacaaaactacagtta---gatagaagacataagttccaatgttcatagcagagtacagtgac--tagttagcaatgatgtattatatatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgacatgtacttcaggtaatggatactccaactaccctgatttaatcattaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110124 288 - 72318688 gtgtggttgggaagtgggcaagaagaaaggttggttaattcgtacaaaactacagtta---gatagaagacataagttccaatgttcatagcagagtacagtgactgtagttagcaatgatgtattatgtatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgacatgtacttcaggtaatggatactccaactaccctgatttaatctttaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 446624 288 - 1517660 gtgtggttgggaagtgggcaagaagaaaggttggttaattcgtacaaaactacagtta---gatagaagacataagttccaatgttcacagcagagtacagtgactgtagttagcaatgatctattatatatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgatatgtacttcaggtaatggatactccaactacccagatttaatcattaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3542493 288 + 6513552 gtgtggttgggaagtgggcaagaagaaaggttggttaattcattcaaaattacagtta---gatagaagagataagttccagtattcatagcagagtacagtgactgtagttagcaatgatgtattatatatttcaaagtggctagaagagaggacttgaaatgttcttagttcacagaaatgacatgtacttcaggtaatggatacaccaactaccctgatttaatcattaaacattttatgcatgtaataaa------taccccataaatgtagaaaatattacgtatt-aatttt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314194 286 + 117903854 gtatggttgggaagtgggaataaagagaggttggttaattggtacaaac--------a---gatagaagatagaagttctaatgttcatagcagagtacagtgactatagttagcaatgatgtattatatattacaaagtagctaggagagaggacttgaattgttctcaattcatagaaatgatacttagtgtggatgacggatactccaaataccttgacttaatcatcaaacattttatgtgtgtaataaatacatatgccccataaatgtataaaatactatgtatt-aattta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19501191 292 - 31320352 gtatggttgggaattgggactaaagagaggttggttaattggtacaaac--agagtta---gatagaagatagaaattctaatgttcatagcagagtacagtgactatagttagcaatgatgtattatatatttcaaagtggctaggagagaagacttgaattgttttcaattcatagaaatgatacttagtccggatgatggatactccagataccctgacttaatcatcaaacattgtgtgtgtgtaataaatatatatgccccgtaagtgtataaaatactatgtatt-aattta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1696730 291 + 2203405 gtatggttgggaagtgggaataaagagaggttggttaattggtacaaac--agagtta---gatagaagatagaagttctaatgttcatagcagagtacattgactatacttagcaatgatgttttatatatttcaaagtggctaggagagaggacttgaattgttctcaattcatagaaatgatacttagtccggaagatggatactccaaataccctgacttaatcatc-aacattttgtgtgtgtgataaatacatatgccccataaatgtataaaatactatgtatt-aattta i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649119 292 - 14941987 gtgtggttgggaagtgggaataaagacaggttggttaattggtacaaac--agagtta---aatagaagacagaagttttaatgttcatagcagagtacagtgactatagttagcaacgatgtattatatatttcaaagtggctgggagagaggacttgaattgttctcaattcatagaaatgatacttagtctgcatgatggatactccaaataccctgacttaatcatcaaacattttgtgtgtgtgataaatacatatgccccataaatgtataaaatattatgtatt-aattta i aotNan1.NW_018502140v1 I 25 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 526398 5785 - 2150887 I e canFam3.chr1 112351628 369 - 122678785 I e otoGar3.GL873546 11273952 521 - 20685099 I a score=12376.000000 s hg38.chr18_GL383571v1_alt 180343 1 + 198278 A s panTro5.chr18 65090392 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209299 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5428827 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469337 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419105 1 + 70235451 a i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110422 1 - 75711847 a i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13669748 1 - 18804593 a i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281569 1 + 18905526 a i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110412 1 - 72318688 a i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 446912 1 - 1517660 a i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3542781 1 + 6513552 a i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314480 1 + 117903854 a i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19501483 1 - 31320352 a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697021 1 + 2203405 a i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649411 1 - 14941987 a i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 532183 1 - 2150887 A i dasNov3.JH575754 I 5785 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e canFam3.chr1 112351628 369 - 122678785 I e otoGar3.GL873546 11273952 521 - 20685099 I a score=3430312.000000 s hg38.chr18_GL383571v1_alt 180344 335 + 198278 AAAGGAATCTTTGATAATAAGTGTGGCACATATT----AAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTGTTTTTTATAAAA--A--------AGATACATCGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTACTTTTAAAAAATGGATCTCAACCTCATGTAAATTAGCTTTTATT-GTTC-CCTTAAAATCAATTTTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TTTGTA------------------------------TCTA------------------CCATC-A-----------------------AAAGGGGTAGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCG--------CCTTTCCCTACAGTGAATTA s panTro5.chr18 65090393 333 + 78221452 AAAGGAATCTTTGATAATAAGTGTGGCACACATT----AAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTTTTTTT--TTAAA--A--------AGATACATTGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTACTTTTAAAAAATGGATCTCAACCTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAATTTTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TTTGTA------------------------------TATA------------------CCATC-A-----------------------AAAGGGATATAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCG--------CCTTTCCCTGCAGTGAATTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209300 333 + 77229886 AAAGGAATCTTTGATAATAAGTGTGGCACACATT----AAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTTTTTTT--TTAAA--A--------AGATACATTGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTACTTTTAAAAAATGGATCTCAACCTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAATTTTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TTTGTA------------------------------TATA------------------CCATC-A-----------------------AAAGGGATATAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCG--------CCTTTCCCTGCAGTGAATTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5428828 329 + 17472758 AAAGGAATCTTTGATAATAAGTGTGGCACATATT----TAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTGTTTTTTTTTTTA--A--------AGATACATCGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTACTTTTAAAAAATGGATCTGAACCTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAATTTTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TTTGTA------------------------------TATA------------------CCATC-A-----------------------AAAGGGATAGAAATACCAGTTTTAA-TAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCG-------------CCCTGCAGTGAATTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469338 330 - 152096393 AAAGGAATCTTTGATAATAAGTGTGGCACATATT----AAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTTTTTTT-----AA--A--------AGATACATCGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTACTTTTAAAAAATGGATCTCAACCTCATGTAGATTAGCTTTTATT-GTTC-CCTTCAAATCAATTTTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TTCGTA------------------------------TATA------------------CCATC-A-----------------------AAAGGCATAGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTTG--------CCTTTCCCTGCAGTGAATTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419106 338 + 70235451 aaagaaaTCTTTGATAATAAGTGTGGCACATATT----AATCATTAGATTTGAAACATCAAAAAT-TTAATTCAA-----CTC--TTTTT--TTAAA--A--------AGATACATAGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTGCTTTTAAAAAATGGATCTCAAACTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTGTTCTTAATGTCATTTAAAT---------------AT-------------TTTGCA------------------------------TATA------------------CCGTC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACATGTG---AAAAGGAAGTCACCAGGTCGCCTTTCCCTGCAGTGAATTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110423 338 - 75711847 aaagaaaTCTTTGATAATAAGTGTGGCACATATT----AATCATTAGATTTGAAACATCAAAAAT-TTAATTCAA-----CTC--TTTTT--TTAAA--A--------AGATACATAGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTGCTTTTAAAAAATGGATCTCAAACTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTGTTCTTAATGTCATTTAAAT---------------AT-------------TTTGCA------------------------------TATA------------------CCGTC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACATGTG---AAAAGGAAGTCACCAGGTCGCCTTTCCCTGCAGTGAATTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13669749 338 - 18804593 aaagaaaTCTTTGATAATAAGTGTGGCACATATT----AATCATTAGATTTGAAACATCAAAAAT-TTAATTCAA-----CTC--TTTTT--TTAAA--A--------AGATACATAGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTGCTTTTAAAAAATGGATCTCAAACTCGTGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTGTTCTTAATGTCATTTAAAT---------------AT-------------TTTGCA------------------------------TATA------------------CCGTC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACATGTG---AAAAGGAAGTCACCAGGTCGCCTTTCCCTGCAGTGAATTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281570 340 + 18905526 aaagaaaTCTTTGATAATAAGTGTGGCGCATATT----AATCATTAGATTTGAAACATCAAAAAT-TTAATTCAA-----CTCTGTTTTT--TTAAA--A--------AGATACATAGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTGCTTTTAAAAAATGGATCTCAAACTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTGTTCTTAATGTCATTTAAAT---------------AT-------------TTTGCA------------------------------TATA------------------CCGTC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGGCCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCACCAGGTCGCCTTTCCCTGCAGTGAATTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110413 339 - 72318688 aaagaaaTCTTTGATAATAAGTGTGGCACATATT----AAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTGTTTTT--TAAAA--A--------AGATACATAGGTTTAATAAC-ACTTTT-----------CTTTAGTAAAAAAAGTTGCTTTTAAAAAATGGATCTCAAACTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTATTCTTAATGTCATTTAAAT---------------AT-------------TTTGCA------------------------------TATA------------------CCGTC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCGCCAAGTCGCCTTTCCCTGCAGTGAATTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 446913 340 - 1517660 aaagaaaTCTTTGATAATAAGTGTGGCACATATT----AATCATTAGATTTGAAACATCAAAAAT-TTAATTCAA-----CTCTGTTTTT--TTAAA--A--------AGATACATAGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAAAGTTGCTTTTAAAAAATGGATCTCAAACTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTGTTCTTAATGTCATTTAAAT---------------AT-------------TTTGCA------------------------------TATA------------------CCGTC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----CCTTGTG---AAAAGGAAGTCACCAGGTCGCCTTTCCCTGCAGTGAATTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3542782 338 + 6513552 aaagaaaTCTTTGATAATAAGCGTGGCACATATT----AAACATTAAACTTGAAACATCAAAAAT-TTAATTCAA-----CTCTGTTTTT--TTAAA--A--------AGATACATAGGTTTAATAACTGCTTTT-----------CTTTAGTAAAAAATGTTGCTTTTAAATAATGGATCTCAAACTCATGTAGATTAGCTTTTATT-GTTC-CCTTAAAATCAA-TTTTAATACTGTTCTTAATGTCATTTAAAT----------------T-------------TTTGCA------------------------------TATA------------------CT-TC-A-----------------------AAAGGGATGGAAATATCAGTTTTAACCAAAAAGATACAAAGACCACCAAAGTTT-----ACTTGTG---AAAAGGAAGTCGCCAGGTCTCCTTTCCCTGCAGTGAATTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314481 340 + 117903854 aaaaTAATCTTTG---ATAAGTGTTGCACATACTAGACAAACATTAGACTTTAAACATCGAAAAT-TTAATTCAACCTCTGTTTTTTTTT--TTTAA-------------ATACATAGGTTGAATAAC-GTTTTT-----------CTTTAGTAAAAAATGCTACTTTTAAAAAATGGAGCTCGACCTCATGTAGATTAGCTTTTATTGTTTC-CCTTAAACTCAA-TGTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TGTTCA------------------------------TATA------------------CCATT-A-----------------------AAAGGGATAGAAATATCAGTTTTAACCAAAAAGATACAAAGACTACCAACATTTGATTAGCTTATG---AAAAGGAAGTTG--------CCTTGCCCTGCAGTTAATTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19501484 341 - 31320352 aaaaTAATTTTTGAT-ATAAGCGTTGCACATACTAGACAAACATTAGATTTGAAACATCAAAAAT-TTAATTCAA-CTCTGTTTCTTTTT--TTAAA------------GATACATAGGTTGAATAAC--TTTTT-----------CTTTAGTAAAAAATGCTACTTGTAAAAAATGGAGCTCAACCTCATGTAGATTAGCTTTTATTGTTTC-CCTTAAACTCAA-TGTTAATACTATTCTTAATGTCATTTAAAG---------------AT-------------TTTTCA------------------------------TATA------------------CCATT-A-----------------------AAAGGGATAGAAATACCAGTTTTAACCAAAAAGATACAAAGACTACCAAAGTTTGATTAATGTATG---AAAAGGAAGTTG--------TCTTGCCCTGCAGTTAATTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697022 336 + 2203405 aaaaTAACCTTTG---ATAAGTGTTGCACATACTAGGCAAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA---------CTTTTT--TTAAA-AA--------AGATACATAGGTTGAATAACTGTTTTT-----------CTTTAGTAAAAAATGCTACTTGTAAAAAATGGAGCTCAACCTCATGTAGGTTAGCTTTTGTTGTTTC-CCTTAAACTCAA-TGTTAATATTGTTCTTAATGTCATTTAAAG---------------AT-------------TTTTCA------------------------------TATA------------------CCATT-A-----------------------AAAGGGATAGAAATACCAGTTTTAACCAAAAAGATACAAAGACTACCAAAGTTTGATTAACTTATG---AAAAGGAAGTTG--------CCTTGCCCTGCAGTTAATTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649412 339 - 14941987 aaaaTAATCTTTGATAATAAGTGTTGCACATACTAGACAAACATTAGACTTGAAACATCAAAAAT-TTAATTCAA-------CTGTTTTT--TTAAATAA--------AGATACATAGGTTGAATAAC--TTTTT-----------CTTTAGTAAAAAACACTACTTGTAAAAAATGGAGCTCAACCTCATGTAGATTAGTTTTTATT-TTTC-CCTTAAATTCAA-TGTTAATACTATTCTTAATGTCAGTTAAAG---------------AT-------------TTTTCA------------------------------TATA------------------CCATT-A-----------------------AAAGGGATAGAAATACCAGTTTTAACCAAAAAGATACAAAGACTACCAAAGTTTGATTAACTTATG---AAAAGGAAGTTG--------CCTTGCCCTGCAATTAATTA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11274473 337 - 20685099 AAAAGAATCTTTAGTAAAAGATGTTGTGAATATTTGATAAATATTAGACTCAAAACATCAAAAAT-----TTCAA-----CTTTGTTTTC--TTTAA--AGATGATGCAAATATTTAGTTTTAATAACTGGTTTT-----------ATTCAGTAATAAATGCTACTT-----AAATGGAGATTAAGCTCATATAGCTCCGTTTTCTTG-TTTC-TCTCACAGTTGA-TTTTATTATCACCCTTAATGCCATCGAAAG---------------AT-------------ATT-CA------------------------------GACA------------------TCATTAA-----------------------AAAAGGGAAAGAATATTAATTTTTG-CAAAATAGTGCGAAGACCACAGAAATTT-----TCTTAAGTGTGGAAAGAAGTTG--------GCTTGGCCTACAGCCCACCA i otoGar3.GL873546 I 521 C 0 s canFam3.chr1 112351997 393 - 122678785 AGAAGAATCCTTGATGAAGGATGTTGTAAATATTAGCAAAACATTAGACTTAGAACATCAAAAAA-TTAATTCAA-----CTCTGTTTTC--TCTAA--AGATGAGATAAACATTTAGGTTTAGTAATTACTTTT-----------GTTCTCTAAACAATGCTACTTATAAAAGTTGAAGTTCAATTTCATGTAGATTAGCTTTTATTATTTC-CCTTAAAGTCAA-TTTTAATACCATCTTTAACATCATTTAAAGTCAGCATTTATACTCTT-------------TGTGCATGTACTACTTACTCTTCCACCATTAATTAGTATA------------------CCATG-T-----------------------AAAGGGATAGAAATACCAATTTAA--CGGAAAGATTTGACTACCACCAAAGTTTTCTTAACTTGTG---TAAAGGAAATCG--------CCTTGCTCCACAGTAAATTA i canFam3.chr1 I 369 C 0 s dasNov3.JH575754 532184 406 - 2150887 GAAAGAATCCTGGACATAGGATGTTATAAATATT----AAATAT--ACTTCAGAATATAAAAAAAGTTCATTGAA-----CACAGTTTGT--TTTAG--AAATGAGATAAATATTAAGGTTTAGTAATCGCCCTTGTAATTAAGTAATTAAGTAATTAGTGCTACTT--AAAAAAATGAGGATAACCTCAAGTAGATTAGTTTTTATT-GTTCTCCTTAAAATAGA-TTTTAATAATATTCTTAACATTATTTAAAG---------------TTAGCATGTATACTATTTGCA------------------------------CACAGGTTTCCATGTTGCTTTTCTGTC-ATTAATCAGTCCACTATCTAAACTAAAGGGATGTGAATACTAATATAA--TAAAAAAATATGAAGACCACTAAAATGATCTCAGCTTGTA---GGAGGAGACATG--------CCGAGTGCTGCCATGAATTA i dasNov3.JH575754 C 0 I 1166 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I a score=705518.000000 s hg38.chr18_GL383571v1_alt 180679 72 + 198278 TCATTAACGCCATTGCCAGAACTTAAGGTTTCACATTATGCCTGGGCAATGCTGATGGTAGCTTCCAGTGTT s panTro5.chr18 65090726 72 + 78221452 TCATTAATGCCATTGCCAGAACTTAAGGTTTCACATTATGCCTGGGCAATGCTGATGGTAGCTTCCAGTGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209633 72 + 77229886 TCATTAACGCCATTGCCAGAACTTAAGGTTTCACATTATGCCTGGGCAATGCTGATGGTAGCTTCCAGTGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429157 72 + 17472758 TCATTAACTCCATTGCCAGAACTTAAGGTTTCACATTATGCCTGGGCAATGCTGATGGTAGCTTCCAGTGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469668 72 - 152096393 TCATTAACACCATTGCCAGAACTTAAGGTTTCACATGATGCCCAGGCAATGCTGATGGTAGCTTGCAGTGCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419444 72 + 70235451 TCATTAACGCCATTGCCAGGACTTAAGGGTTCACATTATGCCCAGGCAATGCTGATGGTAGCTTCCAGTGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110761 72 - 75711847 TCATTAACGCCATTGCCAGGACTTAAGGGTTCACATTATGCCCAGGCAATGCTGATGGTAGCTTCCAGTGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670087 72 - 18804593 TCATTAACGCCATTGCCAGGACTTAAGGGTTCACATTATGCCCAGGCAATGCTGATGGTAGCTTCCAGTGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281910 72 + 18905526 TCATTAACGCCATTGCCAGGACTTAAGGGTTCACATTATGCCCAGGCAATGCTGATGGTAGCGTCCAGTGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110752 72 - 72318688 TCATTAACGCCATTGCCAGGATTTAAGGTTTCACGTTATGCCCAGGCAATACTGATGGTAGCTTCCAGTGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447253 72 - 1517660 TCATTAACGCCATTGCCAGGACTTAAGGGTTCACATTATGCCCAGGCAATGCTGATGGTAGCTTCCAGTGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543120 72 + 6513552 TCATTAACGCCATTGCCAGGACTTAAGGGTTCACGTTATGCCCAGGCAATGCTGATGGTAGCTTCCAGTGCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314821 53 + 117903854 TCA-------------------TTAATGTTTCACGTTATGCTCAGGCAGTGCCGATGGTAGCTTTGAGTGCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19501825 72 - 31320352 TCATTAACGCCATTGCCAGAACTTAATGTTTCACATTATGCTCAGGCAGTGCTGATGGTAGCTTTGAGTGCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697358 72 + 2203405 TCATTAACGCCATTACCAGAACTTAATGTTTCACATTGTGCTCAGGCAGTGCTGATGGTAGCTTTGAGTGCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649751 72 - 14941987 TCATTAACGCCATTGCCAGAACTTAATGTTTCACCTTATGCTCAGGCAGTGCTGATGGTAGCTTTGAGTGCT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11274810 71 - 20685099 CCATCAAGGGCATTGAGAGAAGCTGGTGTTGGAGGTTACGC-CAAGCAATGCTCATCCCGATTCACAGAGCA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352390 71 - 122678785 TCATTACAGTCACTGCCAGAACCTAGTAACTCATTTTCTGA-AAGCCCATCAGGATCCTGATTTAGAGAGCA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I e dasNov3.JH575754 532590 1166 - 2150887 I a score=580287.000000 s hg38.chr18_GL383571v1_alt 180751 56 + 198278 TGCTGGTGAGAG----CCTCTGGATCGTGAGGTCCACAAGAGGAAACAAAAGGTTGCATG s panTro5.chr18 65090798 56 + 78221452 TGCTGGTGAGAG----CCTCTGGATCATGAGGTCCACAAGAGGAAACAAAAGGTCGCATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209705 56 + 77229886 TGCTGGTGAGAG----CCTCTGGATCATGAGGTCCACAAGAGGAAACAAAAGGTCGCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429229 56 + 17472758 TGCTGGTGAGAG----CCTATGGATTGTGAGGTCCACAAGAGGAAACAAAAGGTCACATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469740 55 - 152096393 TGCTGATGAGAG----CCTCTGGATCATGAGGCCCATAAGAAGAAA-AAAAGGTCACATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419516 55 + 70235451 TGCTGATGAGAA----ATTCTGGATCATGTGGTCCACAAGAGGAAAC-AAAGGTCACATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110833 56 - 75711847 TGCTGATGAGAA----ATTCTGGATCATGTGGTCCACAAGAGGAAACAAAAGGTCACATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670159 56 - 18804593 TGCTGATGAGAA----ATTCTGGATCATGTGGTCCACAAGAGGAAACAAAAGGTCACATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13281982 56 + 18905526 TGCTGATGAGAA----ATTCTGGATCATGTGGTCCACAAGAGGAAACAAAAGGTCACATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110824 56 - 72318688 TGCTGATGAGAG----GTTCTGGATCGTGTGGTCCACAAGAGGAAACAAAAGGTCACGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447325 56 - 1517660 TGCTGATGAGAA----ATTCTGGATCATGTGGTCCACAAGAGGAAACAAAAGGTCACATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543192 56 + 6513552 TGCTGATGAGAG----ATTCTGGATCGTGTGGTCCACAAATGGAAACAAAAGGTCACATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314874 56 + 117903854 TGCTGATGAGAA----CCTCTGAATGGTGAGGTCCACAAGAGGAAACAAGAAGTCATATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19501897 56 - 31320352 TGCCGATGAGAA----CCTCTGGATGGTGAGGTCTGCAAGAGGAAACAAGAAGTCACGTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697430 56 + 2203405 TGCTGATGAGAA----CCTCTGAATGGTGAGGTCCACAAGAGGAAACAAGAAGTCATGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649823 56 - 14941987 TGCTGATGAGAA----CCTCTGAATGGTGAGGTCCACAAAAGGAAACAAGAAGTCATGTG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11274881 54 - 20685099 T-CTGATGAGAG----TCGCTGTGTGGTGAGGTTAACAGGATAGAACCCAA-GTCATGTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352461 56 - 122678785 TGCTAATGAGAG----TTTCTCTGTGCTGAGGTCGACAGGATGGAACAAAAGGTCATGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 533756 59 - 2150887 TGCTAACGAAAGTCTCTCTCTCAATGGTAAGGTCATCTGGATGGCACAAGA-CTCATACG i dasNov3.JH575754 I 1166 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1300331 1712 - 1406956 I a score=1439305.000000 s hg38.chr18_GL383571v1_alt 180807 117 + 198278 TGAATTCTACATTTTGAAATTATTTTTTGTGTATCTCT-TTTTATAGTTCTCTTTTTGGCAACTTGCAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACATTT-ACCA--TGGCAAG s panTro5.chr18 65090854 118 + 78221452 TGAATTCTACATTTTGAAATTATTTTTTGTGTATCTCT-TTTTATAGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTTAACCA--TGGCAAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209761 118 + 77229886 TGAATTCTACATTTTGAAATTATTTTTTGTGTATCTCT-TTTTATAGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTTAACCA--TGGCAAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429285 114 + 17472758 TGAATTCTACATTTTGAA---ATTTTTTGTGTATCTCT-TTTTATAGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCA--TGGCAAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469795 117 - 152096393 TGAATTCTACATCTTGAAATTATTTTTTATGTATCTCT-TTTTATAGTTCTCTTTTTGGCAACTTACAAAATCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCA--TGGCAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419571 119 + 70235451 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCAAGTGGCAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63110889 119 - 75711847 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCAAGTGGCAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670215 119 - 18804593 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCAAGTGGCAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282038 119 + 18905526 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCAAGTGGCAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110880 117 - 72318688 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCA--TGGCAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447381 119 - 1517660 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTACAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCAAGTGGCAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543248 117 + 6513552 TGAATTCTACATTTTGAAATTATTTTTTATGTATCTCT-TTTTGTTGTTCTCTTTTTGGCAACTTATAAAACCTCTCTTATTTTTTGTGGA-AAAGTAAAGA-ACACTT-ACCA--TGGCAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105314930 115 + 117903854 TGAATTTTACATTCTGAGATTATTTTTGATGTATCTCT-TTTTATAGTTATC-TTTTGGCAACTTATAAAACCTCTCTTATTTTGGGGGG--AAAGTAAAGA-ACACTT-ACGA--TGTCAAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19501953 116 - 31320352 TGAATTCTACATTTTGAGATTATTTTTTATGTATCTCT-TTTTATAGTTATC-TTTTGGCAACTTATAAAACCTCTCTTATTTTGGGGGGA-AAAGTAAAGA-GCACTT-ACCA--TGGGAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697486 116 + 2203405 TGAATTCAACATTTTGAGATTATTTTTTATGTATCTCT-TTTTATAGTTATC-TTTTGGCAACTTATAAAACCTCTCTTATTTTGGGGGGA-AAAGTAAAGA-ACATTT-ACCA--TGGCAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649879 116 - 14941987 TGAATTCTACATTTTGAGATTATTTTTTATGTATCTCT-TTTTATAGTTATC-TTTTGGCAACTTATAAAACCTCTCTTATTTTGGGGGCA-AAAGTAAAGA-ACACTT-ACCG--TGGCAAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1302043 118 - 1406956 TGAATTCTACATTTTGAAATTATTTTCTACATGTCTCTGTTATATAATTCTCTTTTTGGCAACTTATAAAACCTCTCTTTTTTTTTGTGGA-AGAATAAAAA-ACTCTT-AGCA--TCAAAGG i proCoq1.NW_012148742v1 I 1712 C 0 s otoGar3.GL873546 11274935 120 - 20685099 TAAATTCTGAATTTTGAGATTATTTTGCACATATCTCTGTCTTATAGTTCTCTTTTTGGCAATTTATAAAGCATCTCTTATTAAGGGGGGGCAGAGTAAAAATATTCCT-AGTA--CACAAAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352517 84 - 122678785 TAAACTCTACGTTTTGAAATTATTTTTCACATATCTCT-T-------------GTTTG--------------------TATTTTTTGTGGA-AGTACAAAGA-ACATTT-ACCA--TGGCAAG i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 533815 115 - 2150887 TGAATCCTAATTTTTGAAATTCATTTTCATATATGTTT-GTTTATA-TTCTCTATTGGGAAACTTATAAAACTTCTCTTAGGTTTTATAAA-AGAATAAAGA-ACAAT--GCCA--CAGGAAG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41560804 1033 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=762991.000000 s hg38.chr18_GL383571v1_alt 180924 49 + 198278 AACTTTATAGTAGCAGGGGACC-A---------TTTCTTGTGAATTATGCTATTAATTA s panTro5.chr18 65090972 49 + 78221452 AACTTTACAGTAGCAGGGGACC-A---------TTTCTTGTGAATTATGCTATTAATTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209879 49 + 77229886 AACTTTACAGTAGCAGGGGACC-A---------TTTCTTGTGAATTATGCTATTAATTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429399 49 + 17472758 AACTTTACAGTAGCAGGGGACC-A---------TTTCTTGTGAATTATGCTGTTAATTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469912 49 - 152096393 AACTTTACACTAGCAGGGGACC-A---------TTTCTTGTGAATTATGCTATTAATTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419690 49 + 70235451 AACTTTACACTAACAGAGGACC-A---------TTTCTTGTGAATTATACTATTAATTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111008 49 - 75711847 AACTTTACACTAACAGAGGACC-A---------TTTCTTGTGAATTATACTATTAATTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670334 49 - 18804593 AACTTTACACTAACAGAGGACC-A---------TTTCTTGTGAATTATACTATTAATTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282157 49 + 18905526 AACTTTACACTAACAGAGGACC-A---------TTTCTTGTGAATTATACTATTAATTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60110997 49 - 72318688 AACTTTATCCTAACAGAGGATC-A---------TTTATTGTGAATTAAGCTATTAATTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447500 49 - 1517660 AACTTTACACTAACAGAGGACC-A---------TTTCTTGTGAATTATACTATTAATTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543365 49 + 6513552 AACTTTACACTAACAGAGGACC-A---------TTTCTTGTGAATTATGCTATTAATTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315045 49 + 117903854 AATTTTGCACTAGCAGGGGACC-A---------TTCCTTGTGAATTGTGCTATTAATTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502069 49 - 31320352 AATTTTGCACTAGCAGGGGACC-A---------TTTCTTGTGAATTGTGCTATTAATTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697602 49 + 2203405 AATTTTGCACTAGCAGGGGACC-A---------TTTCTTGTGAATTGTGCTATTAATTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3649995 50 - 14941987 AATTTTGCACTAGCAGGGGACCAA---------TTTCTTGTGAATAGTGCTATTAATTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41561837 49 + 83067054 AACTTTACACTAACAGAGGACC-A---------TTTCTAGTGAACTATACTATTAATTA i micMur3.chr19 I 1033 I 28 s proCoq1.NW_012148742v1 1302161 49 - 1406956 AACTTTACACTAACAGGGGACC-A---------TTTCTCATGAACTATACTATTAATTA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11275055 49 - 20685099 AACTTTACACCAACAGGGGACC-A---------TTTCTTGTGAACTATGCTATTAATTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352602 49 - 122678785 AACTTTACACTAACAGGGAACC-A---------CTTCTTTTGAGCTATGTTGTTAGTTA i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 533930 58 - 2150887 AACTTTATACTAACAGGGAACC-AATTTTTCTTTTTTTTTTTTACTAAGCTAATAGTTA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=117615.000000 s hg38.chr18_GL383571v1_alt 180973 39 + 198278 CAGACTTCCTGTGCCTCATG---ACC--A---AAAAAAA-----AAAAA---AAG s panTro5.chr18 65091021 39 + 78221452 CAGACTTCCTGTGCCTCATG---ACC--A---AAAAAAA-----AAAAA---AAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209928 39 + 77229886 CAGACTTCCTGTGCCTCATG---ACC--A---AAAAAAA-----AAAAA---AAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429448 41 + 17472758 CAGACTTCCTGTGCCTCATG---ACCaaa---aaaaaaa-----aaaaa---aaG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469961 38 - 152096393 CAGACTTCCTGTGCCTCATG---ACC------AAAAAAA-----AAAAA---AAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419739 35 + 70235451 CAGACTTCCTGTGCCTCTTG---ACC--G---AAAAAAA-----A-------AGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111057 35 - 75711847 CAGACTTCCTGTGCCTCTTG---ACC--G---AAAAAAA-----A-------AGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670383 35 - 18804593 CAGACTTCCTGTGCCTCTTG---ACC--G---AAAAAAA-----A-------AGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282206 38 + 18905526 CAGACTTCCTGTGCCTCATG---ACC--GAAAAAAAAAA-----A-------AGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111046 39 - 72318688 CAGACTTCCTGTGCCTCATG---ACT--G---AAAAAAA-----AAAA---GAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447549 32 - 1517660 CAGACTTCCTGTGCCTCATG---ACC--G---AAAAA---------------AGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543414 41 + 6513552 CAGACTTCCTGCGCCTCATG---ACC--G---AAAAAAA-----AAAAAG-AAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315094 34 + 117903854 CAGAATTCCTGTGCCTCATG-AAAAC--A---AAACAAA---------------A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502118 49 - 31320352 CAGAATTCCTGTGCCTCATG-aaaac--a---aaacaaaacagaacaaaacaGTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697651 44 + 2203405 CAGAATTCCTGTGCCTCATG-AAAAC--A---AAACAAA-----ACAAAATAATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650045 45 - 14941987 CAGAATTCCTGTGCCTCATGAaaaac--a---aaacaaa-----acaaaacaata i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1302210 30 - 1406956 GAGAGTTCTTTTGCCTCACG---AAA--A---ACAATA----------------- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11275104 30 - 20685099 TTGAGTTCTTTTGCCTTGTG---GAA--A---ACAATA----------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352651 29 - 122678785 CAGAC-TCCTATTTCTCATG---AAA--A---GCAATG----------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 533988 7 - 2150887 CATAGTC------------------------------------------------ i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41561886 28 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=1676172.000000 s hg38.chr18_GL383571v1_alt 181012 129 + 198278 CACTTCTTAAAATGAAGGTAAAATTTGTTATTCTTATCCTTCTTCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattgtgaa-ttaaaaatgtctcaaatatataactt----aaaa----------------------atGCTTA-G s panTro5.chr18 65091060 129 + 78221452 CACTTCTTAAAATGAAGGTAAAATTTGTTATTCTCATCCTTCTTCCTTTCAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattgtgaa-ttaaaaatgtctcaaatatataactt----aaaa----------------------atGCTTA-G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64209967 129 + 77229886 CACTTCTTAAAATGAAGGTAAAATTTGTTATTCTTATCCTTCTTCCTTTCAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattgtgaa-ttaaaaatgtctcaaatatataactt----aaaa----------------------atGCTTA-G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429489 129 + 17472758 CACTTCTTAAAATGAAGGTAAAATTTGTTAATCTTATCCTTCTTCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattgtgaa-ttaaaaatgtctcaaatatataactt----aaaa----------------------atGCTTA-G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139469999 128 - 152096393 CGCTTCTTAAAATGAAGGTAAAGCTTGTTACTCTTATCCTTCTTCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTAATTTAAAATTGTGAA-TT-AAAATGTCTCAAATATATAACTT----AAAA----------------------ATGCTTA-G i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419774 130 + 70235451 CAGTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCGTCATCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtgtcaaatatataactt---aaaaa----------------------ATGCTTA-G i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111092 130 - 75711847 CAGTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCGTCGTCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtgtcaaatatataactt---aaaaA----------------------ATGCTTA-G i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670418 130 - 18804593 CAGTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCGTCGTCCTTTAAACTG-----TCTTTTCTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtgtcaaatatataactt---aaaaA----------------------ATGCTTA-G i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282244 130 + 18905526 CAGTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCGTCGTCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtgtcaaatatataactt---aaaaa----------------------ATGCTTA-G i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111085 135 - 72318688 CACTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCGTCATCCTTTAAACTGTCCTTTCCTTTCTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtgtcaaatatataactt---aaaaA----------------------ATGCTTA-G i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447581 130 - 1517660 CAGTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCATCGTCCTTTAAACTG-----TCCTTTCTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtgtcaaatatataactt---aaaaA----------------------ATGCTTA-G i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543455 130 + 6513552 CACTTCTTAAAATGAAGGTAAAATTTGTTAGTCTTATCCATCGTCCTTTAAATTG-----TCCTTTCTGTGTTAGAAAGTAATTTAAGATTATGAA-TTAAAAATGTGTCAAATATGTAACTT---AAAAA----------------------ATGCTTA-G i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315128 130 + 117903854 CGTTTCTTAAAATGAAGATAGAACTTGTTATTCTTACCCTTTTTCCTTTAAACTG-----TCC-TTCTGTGTTCGAAAGtaatttaaaattatgaa-ttaaaaatgtctcaaatatataattt--ttaaaa----------------------atGCTTA-G i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502167 127 - 31320352 CATTTCTTAAAATAAAGATAGAACTTGTTATTCTTATCCTTTTTCCTTTAAACTG-----TC----CTGTGTTGGAAAGTAACTTAAAATTATGAA-TTAAAAATGTCTCaaatatataattt--ttaaaa----------------------atGCTTA-G i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697695 128 + 2203405 AATTTCTTAAAATGAAGATAGAACTTATTATTCTTATCCTTTTTCCTTTAAACTG-----TC----CTGTGTTAGAAAGTaatttaaaattatgaa-ttaaaaatgtctcaaatatataattt--TTAAAA----------------------ATGCTTAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650090 130 - 14941987 caTTTCTTAAAATCAAGATAGAACTTGTTATTCTTATCTTTTTCCTTTTAAACTG-----TCC-TTCTGTGTTAGAAAGtaatttaaaattatgaa-ttaaaaatgtctcaaatatataattt--ttaaAA----------------------ATGCTTA-G i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41561914 131 + 83067054 CACTTCTTAAAGTAAAGATATAATTCATTATTCTTATCCTTCTGCATTTAAACTG-----TTC-TCCTGTGTTAAAAACTAATTTAAAATTATGAA--TAAAAACTTCTCAAATGTACAATTTAAAAAGAA----------------------ATGCTTA-G i micMur3.chr19 I 28 C 0 s proCoq1.NW_012148742v1 1302240 131 - 1406956 CACTTCTTAAAGTGAAGATATAATTCATTATTCTTATCCTTCTGCCTTTAAACTG-----TTC-TCCTGTGTTAAAAACTaatttaaaattatgaa--taaacacttctcaaatgtacaatttaaaaAGAA----------------------ATGCTTA-G i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11275134 129 - 20685099 CACTTCTTAAAGAGAAGATATAATTTGTTATTCTTATCCTTCTGCATTTAAAC-------TTC-TTTTATATTAAAAAGTAATCGAAAATTATGAA--TAAAAACGTCTCAAATATATAATTTAAAAAGAA----------------------ATGCTAA-G i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352680 141 - 122678785 CACTTCTTGAACTGAAGATATG---------TCTTCTCCTTCTATATTTGAACTG-----TTC-TTCTGTGTTATAAGGTAATTTAGAATTAGGTT-TTAAAAGTTTCTTAAATGTATAATTT----AAAATGCAAGTCTTggggcacctgagttgctca-g i canFam3.chr1 C 0 I 105 s dasNov3.JH575754 533995 102 - 2150887 -------------------------------TCTTATCCTTGTCTCTCCAAACTG-----CTC-TTCTGTGTTATGAGGCAATTTAAAATTAGGGAGTTAAAATTTTCTTAAATACATGATTTTAAAAGAA----------------------AATCTTA-G i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=3020491.000000 s hg38.chr18_GL383571v1_alt 181141 230 + 198278 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCACTCCAGATACCTT-----------TATCTTTGCATTTCATACT---GCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTCG------GTTTTCCTTCCTA-------------AGGACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAACTCAGTATAGTTCA-TAGCTTCAAATATTTTATTCTGGCTTATTTA s panTro5.chr18 65091189 230 + 78221452 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCACTCCAGATACCTT-----------TATCTTTGCATTTCATACT---TCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTTG------GTTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAACTCAGTATAGTTCA-TAGCTTCAAATATTTTATTCTGGCTTATTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210096 230 + 77229886 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCACTCCAGATACCTT-----------TATCTTTGCATTTCATACT---TCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTTG------GTTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAACTCAGTATAGTTCA-TAGCTTCAAATATTTTATTCTGGCTTATTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429618 230 + 17472758 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCACTCCAGATACCTT-----------TATCTTTACATTTCATACT---GCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTTG------GTTTTCCTTCCTA-------------AGGACGTATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAACTCAGTATAGTTCA-TAGCTTCAAATATTTTATTCTGGCTTATTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470127 230 - 152096393 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATAATTTCTTTTACATCCATCTAAGGAACTTAATTTCCATTATTCATTCCAGATACCTT-----------TATCTTTGCATTTCATACT---GCTGTGAATAGTATTATTCAATGTGCTTTTAATTTGCACTCG------GTTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAACTCAGTATAGTTCA-TAGCTTTAAATATTTTATTCTGGCTTATTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57419904 230 + 70235451 GGGAATTTGAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATATTATTATTCAATGTGCTTTTAATTTGGACTCG------ATTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCGGTATAGTTCA-CAGCTTCAAATATTTTATTCTGGCTTCTTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111222 230 - 75711847 GGGAATTTGAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATATTATTATTCAATGTGCTTTTAATTTGGACTCG------ATTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCGGTATAGTTCA-CAGCTTCAAATATTTTATTCTGGCTTCTTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670548 230 - 18804593 GGGAATTTGAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATATTATTATTCAATGTGCTTTTAATTTGGACTCG------ATTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCGGTATAGTTCA-CAGCTTCAAATATTTTATTCTGGCTTCTTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282374 230 + 18905526 GGGGATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTCG------ATTTTCCTTCCTA-------------AGTACATGTTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCGGTATAGTTCA-CAGCTTCAAATATTTTATTCTGGCTTCTTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111220 230 - 72318688 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTCG------GTTTTCCTTCCTA-------------AGTATATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCAGTATAGTTCA-CAGCTTCAAATATTTTATTCTGGCTTCTTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447711 230 - 1517660 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTCG------ATTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCGGTATAGTTCA-CAGCTTCAAATATTTTATTCTGGCTTCTTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543585 230 + 6513552 GGGAATTTAAAAACAGATCCAAA----------------------------------------------------------------------------------------------TAATCATTTCTTTTACATTCATCTAATGAACTTAATTTCCATTATTCATTCCAGTTACTTT-----------TATCTTTGCATTTCATACT---GCTATGAATAGTATTATTCAATGTGCTTTTAATTTGGACTCG------GTTTTCCTTCCTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CCTCAAACTCAGCATAGTTCA-CAGCTTCAAATATTTTGTTCTGGCTTCTTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315258 228 + 117903854 GGGAATTTAAAAACAGATCTGAA---------------------------------------------------------------------------------------------------------TTTACCTTCATCAAATGAACTTAATTTTCATTATTCATTCCAGATGAAATGAATAATGAAATATCTTTGCATTTCATACT---GGTATGAATAGTATTATTCAATGTCCATTTAATTCGGACTCC------TTTTT-CTTCTTA-------------AATACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAA--------------------------------CATCAAA--CAGTATAGTTCAATAGCTTCGGATATTTTATTCTGGCTTATTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502294 240 - 31320352 GGGAATTTAAAAACAGATCTGAA----------------------------------------------------------------------------------------------TGGTCATTTCTTTTACATTCATCAAATGAACTGAATTTTCATTATTCATTCCAGATGAAATGAATAATGAAATATCTTTGCATTTCATACT---GGTATGAATAGTATTATTCAATGTCCATTTAATTCAGACTCC------TTTTTCCTTCTTA-------------AATGCATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATTAGA--CAGTATAGTTCATTAGCTTCAGATATTTTATTCTGGCTTATTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1697823 238 + 2203405 GGGAATTTAAAAAC--ATCTGAA----------------------------------------------------------------------------------------------TGGTCATTTCTTTTACATTCATCAAATGAACTTCATTTTCGTTATTCATTCCAGATGAAATGAATAATGAAATATCTTTGCATTTCATACT---GCTATGAATAGTATTATTCAATGTCTATTTAATTCAGACTCC------TTTTTCCTTCTTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAA--CAGTATAGTTCATTAGCTTCGTATATTTTATTCCGGCTTATTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650220 240 - 14941987 GGGAATTTAAAAACAGATCTGAA----------------------------------------------------------------------------------------------TGGTCATTTCTTTTACATTCATCAAATGAACTTAATTTTCATTATTCATTCCAGATGAAATGAATAATGAAATATCTTTGCATTTCATACT---GGGATGAATAGTATTATTCAATGTCCATTTAATTCGGACTCC------TTTTTCCTTCTTA-------------AGTACATATTA-TTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATCAAA--CAGTATAGTTCAATAGCTTCAGATATTTTATTCTGGCTTATTTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562045 232 + 83067054 GGGAACTTAAAAATGGATCCAAA----------------------------------------------------------------------------------------------TGGtcacttcatttccattcatttacttaacttaatttctattattcattccagatgccct-----------tatctttgcatttcatACTTGTGCTATGAATAGTATTCCTTAATGTACATTTAATTTGGACTCA---------TTTTTGCTTA-------------AGAACATATTATTTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATGAAACCCAGTATAGTTCAATAGCTTCAAATATTTCATTCCAGCTTCTTTA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1302371 233 - 1406956 GGGAACTTAAAAATGGATCCAAA----------------------------------------------------------------------------------------------TGGTCACTTCATTTCCATTCATTTAGTTAACTTAATTTCTATTATTCATTCCAGATGCCCT-----------TATCTTTGCATTTCATACTTGTGCTATGAATAGTATTCCTTAATGTGCATTTAATTTGGACTCA--------TTTTTTGCTTA-------------AGTACATATTATTTTT--------------------------------------------------------------------------------------------------------------------------------TAAAC--------------------------------CATGAAACCCAGTGTAGTTCAACAGCTTCAAATATTTCATTCCAGCTTCTTTA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11275263 227 - 20685099 GGGAACTTAAAAATGGGTCCAAA----------------------------------------------------------------------------------------------TGGTCACTTCATTTCCATTCATTTAG-----TTAATTTCCGTTGCTCATTCCAGATACCCT-----------TATCTTTGCATTTCACACTTGGGGTCTGAATAGTATTATTTAACGTGCATTTAATTTGGACTCA---------TTTTTGCTTA-------------AGTACATATTATTTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATGAAACCCAGGATAGTTCAATAGCTTCAGATATTTCATTCCAAGTTCTTTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112352926 413 - 122678785 AGAATTTCGAAAATAGATCCAAA----------------------------------------------------------------------------------------------CAGTTACCTTTTATTCATTGATTTAATTAGCTTAATTTCTATTACTGTTTCCAGATTCCAT-----------TACCTTTGCATTTCACACTTGTGCAATGAATAGTATTATTTAATGTACATTTAATTTGCTTCCAAAGTATGTATTATTTTTTAAAACTTGGAACTCAGTACACTTCA-ttttttaaaatatttatttattcatgagagatatatagagagaggtagagacacaggcaaagggagaagcaggcttccctcaaggaccccgatatgggaccggatcccggatcctaagatcacaccctgagccaaaggcagacactcaaatgctaagtcacccatgtgtcccTAAACTCAGTATACTTCAATAGCCTCCAATACTCCATCCCAGttttttaa i canFam3.chr1 I 105 I 206 s dasNov3.JH575754 534097 326 - 2150887 -GGGACTTAAAAATGGATTCAAAgagctgatgtagctccgtgattaagagcctgcttctgcttcgcatgtatgaggtcttaggttcaatttcccggtactgactaaaagaaaTGATCCAAGCACTATTTGCTCAATCATATAGTTCACTTAATCTCCATTATTCATTCCAGATGCCAT-----------TATCTTTGCCATTCATATCTGTCCTATGAATAATATAATCCAATGTGCATTTAATTTGGACTAA------TTTTTGTTTTCTA-------------AGTA-ATATTATTTTT--------------------------------------------------------------------------------------------------------------------------------TAAAG--------------------------------CATGAAACCCAATATAGTTTAATAGCTTCAAATATTTCATTTCAGCTTTCTC- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=293561.000000 s hg38.chr18_GL383571v1_alt 181371 17 + 198278 ATTGCTATTTAAAATTT s panTro5.chr18 65091419 17 + 78221452 ATTGCTATTTAAAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210326 17 + 77229886 ATTGCTATTTAAAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429848 17 + 17472758 ATTGCTATTTAAAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470357 17 - 152096393 ATTGCTATTTAAAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420134 17 + 70235451 ATTGCTATTTAAAATTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111452 17 - 75711847 ATTGCTATTTAAAATTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670778 17 - 18804593 ATTGCTATTTAAAATTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282604 17 + 18905526 ATTGCTATTTAAAATTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111450 17 - 72318688 ATTGCTATTTAAAATTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447941 17 - 1517660 ATTGCTATTTAAAATTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543815 17 + 6513552 ATTGCTATTTAAAATTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315486 17 + 117903854 ATTGCTATTTAAAATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502534 17 - 31320352 ACTGCTATTTAAAATTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698061 17 + 2203405 ACTGCTATTTAAAATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650460 17 - 14941987 ACTGCTATTTAAAATTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562277 17 + 83067054 ATTGCTGTTTAAAATTT i micMur3.chr19 C 0 I 1 s proCoq1.NW_012148742v1 1302604 17 - 1406956 ATTGCCATTTAAAATTT i proCoq1.NW_012148742v1 C 0 I 136 s otoGar3.GL873546 11275490 17 - 20685099 ATTGCTGTTTAAAATTT i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112353545 17 - 122678785 ATTACTGTTTAAATTTT i canFam3.chr1 I 206 I 1 s dasNov3.JH575754 534423 15 - 2150887 --TGTTGTTTAAATTTT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=1399222.000000 s hg38.chr18_GL383571v1_alt 181388 131 + 198278 -AAAACATTTAGTATGA-TAAAATT-------------------AC--CAA--GACAGCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTCGATA-----------------------CATATTGTC----------------TTTTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATGTAACTGACTTAAATA s panTro5.chr18 65091436 131 + 78221452 -AAAACATTTAGTATGA-TAAAATT-------------------AC--CAA--AACAACAGCAAACGGAGAAA---ATAATTTGCCCATTTTCTATA-----------------------CATATTTTC----------------TTTTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATGTAACTGACTTAAATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210343 130 + 77229886 -AAAACATTTAGTATGA-TAAAATT-------------------AC--CAA--AACAACAGCAAACGGGGAAA---ATAATTTGCCCATTTTCTATA-----------------------CATATTTTC-----------------TTTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATGTAACTGACTTAAATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429865 131 + 17472758 -AAAACATTTAGTATGA-TAAAATT-------------------AC--CAA--GACAGCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTCTATA-----------------------CATATTTTC----------------TTTTCTT-TCCTATATAAAAGGCTTGCTAATCTGTAATGTAACTGACTTAAATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470374 131 - 152096393 -AAAACATTTAATATGA-TTAAATT-------------------AC--CAA--GACTGCAGCAAAGGGGGAAT---ATAATTTGCCCATTTTCTATA-----------------------CATATTTTC----------------TTTTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGACTTAAATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420151 128 + 70235451 -AAAACATTTAGTATGA-TAAAATT-------------------AT--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTTACTTAAATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111469 128 - 75711847 -AAAACATTTAGTATGA-TAAAATT-------------------AT--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGACTTAAATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670795 128 - 18804593 -AAAACATTTAGTATGA-TAAAATT-------------------AT--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGACTTAAATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282621 128 + 18905526 -AAAACATTTAGTATGA-TAAAATT-------------------AT--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGACTTAAATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111467 128 - 72318688 -AAAACATTTAGTATGA-TAAAATT-------------------AC--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGACTTAAATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 447958 128 - 1517660 -AAAACATTTAGTATGA-TAAAATT-------------------AT--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGACTTAAATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543832 128 + 6513552 -AAAACATTTAGTATGA-TAAAATT-------------------AT--CAA--GACTTCAGCAAAGGGGGAAA---ATAATTTGCCCATTTTTTATA-----------------------CATATAT-------------------ATTTTT-TCCCATATAAAAGGCTTGTTAATCTGTAATCTAACTGACTTAAATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315503 131 + 117903854 -AAAAC-TTTAGTATGA-TAAAATT-------------------TC--CAC--GACTGCAGCAAAGAGGGACA---ATAATTTGCCCATTTTCTATA-----------------------CATATGTTC---------------TTTTTTTT-TCCTATATAAAAGACTTGCTACTCTGTAATCAAACGGATTTAAATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502551 132 - 31320352 -AAAACTTTTAGTATGA-TAAAATT-------------------TC--CAA--GACTGCAGCAAAGGGGGAAA---GTAATTTGCCCATTTTCTATA-----------------------CATATGTTC---------------TTTTTTTC-CCCTATATTAACGGCTTGCCAATCTGTAATCTAACTGATTTAAATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698078 133 + 2203405 -AAAACTTTTAGTATGATTAAAATT-------------------TC--CAA--GACTGCAGCAAAGGGGGAAA---ATAATTTGCCCCTTTTCTATA-----------------------CGTATGTTC---------------TTTTTTTT-TTCTATATAAAAGGCTTGCTAATCTGTAATCTAACTGATTTAAATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650477 132 - 14941987 -AAAACTTTTAGTATGA-TAAAATT-------------------TC--CAA--GACTGCAGCAAAGGGGGA-A---ATAATTTGCCCATTTTCTATA-----------------------CTTATGTTC---------------TTTTTTTTATCCTATACGAAAGGCTTGCTAATCTGTAATCTAACTGATTTAAATG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562295 124 + 83067054 -AAGACTTTTGGTATTA-TATAATC-------------------AC--CAA-----------AAAGGGGAAAAGCTATAATTTCCTTATTTTCTACA-----------------------CATATATTC-----------------TTCTTT-TTCTACATAAGAGGTTTCTTAGTCTGTAATCTCATTCAATCAGATG i micMur3.chr19 I 1 C 0 s otoGar3.GL873546 11275508 132 - 20685099 -AAAACTTTTAGCATTA-TATATTC-------------------AC--CAAAAGCCTACAGTAAAGGAGAAAAGCTGTAATTTCCTTATTTTTTACA-----------------------CATATA--------------------TTCTTT-TTCTATATAAAAGCTTTCTTAGTCCGTAATCTCATTGAATCAGATG i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112353563 190 - 122678785 -AAAGCCTTTTGTATTG-TATAATCAAAAGTTTGAAAAAAAAAAAA--AAA--GACTGAAGTAACAAAAAAAC-CCATAATTTCCTCATTTTCTAAAATATATCTTGGTTTTCTGTATAGTATATGTGCTGCTGAAGCAAGTGCTCTTGCTT-TTCTATATAAAATA-TTGTTAATTTGTAATCTAACTGAATCACGTG i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 534438 132 - 2150887 TATAGCCTTTAGGATTA-TATAATT-------------------ACGGAAA--GACTGCAAGAAAAGAAAACA-ACATAATTTCTTCATTCCCCATA-----------------------TAT---TTC-----------------TTCTCC-TTCTACATGAAAGATATGTCAATGAGGAATCTAACTAAATCACATC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302621 136 - 1406956 I a score=748884.000000 s hg38.chr18_GL383571v1_alt 181519 51 + 198278 ACCTTGATATGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG s panTro5.chr18 65091567 51 + 78221452 ACCTTGATATGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210473 51 + 77229886 ACCTTGATATGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5429996 51 + 17472758 ACCTTGATATGGTTATGTTGTTGATTTAATTATATCACTTGCTCTTGTGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470505 51 - 152096393 ACCTTAATATGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420279 51 + 70235451 ACTTTGATACGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111597 51 - 75711847 ACTTTGATACGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670923 51 - 18804593 ACTTTGATACGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282749 51 + 18905526 ACCTTGATACGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111595 51 - 72318688 ACCTTGATATGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448086 51 - 1517660 ACCTTGATACGGTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3543960 48 + 6513552 ACCTTGAT---TTTATATTGTTGATTTAATTATATCACTTGCTCTTGTGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315634 51 + 117903854 ACCTTGATATGGTTGTATTGTTGATTTAATTATATCATTTACTCTTGTGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502683 51 - 31320352 ACCTTGATATGGTTGTATTGTTGATTCAATTATATCATTTACTCTTGTGAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698211 51 + 2203405 ACCTTGATACTGTTGTATTGTTGATTCAATTATATCATTAACTCTTGTGAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650609 51 - 14941987 ACCTTGATACGGTTGTATTGTTGATTCAATTATATCATTTACTCTTGTGAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562419 51 + 83067054 ACCTTTATATTATGATACTGTTGATTTAATTACATCACTTGCTCTGATGAG i micMur3.chr19 C 0 I 15 s proCoq1.NW_012148742v1 1302757 51 - 1406956 ACCTTTATATTGTGATACTGTTGATTTAATTGCATCACTTGCTCTAATGAG i proCoq1.NW_012148742v1 I 136 I 2 s otoGar3.GL873546 11275640 51 - 20685099 ACCTTTATATTATAATACCATTGATTTAATTACATTGCTTGCTCTTGTGAG i otoGar3.GL873546 C 0 I 2 s canFam3.chr1 112353753 43 - 122678785 --------ATCTATATATTGTTGAATTAATTACAAACACTGCTTTTGTGAG i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 534570 44 - 2150887 ACCTTTATAT-------TTGTAGATTTAATCACACCACTTGCTTTTGTGAG i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=117564.000000 s hg38.chr18_GL383571v1_alt 181570 11 + 198278 -ATT-GGGAGTTT s panTro5.chr18 65091618 11 + 78221452 -ATC-AGGAGTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210524 11 + 77229886 -ATC-AGGAGTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430047 11 + 17472758 -ATC-AGGAGTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470556 11 - 152096393 -ATC-AGAAGTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420330 12 + 70235451 -ATCTATGAGTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111648 12 - 75711847 -ATCTATGAGTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670974 12 - 18804593 -ATCTATGAGTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282800 12 + 18905526 -ATCTATGAGTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111646 12 - 72318688 -ATCTAGGAGTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448137 12 - 1517660 -ATCTATGAGTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544008 12 + 6513552 -ATCTAGGAGTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315685 12 + 117903854 -ATCTAGGAGTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502734 12 - 31320352 -ATCTAGGAGTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698262 12 + 2203405 -ATCTAGGAGTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650660 12 - 14941987 -ATCTAGGAGTTT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1302810 11 - 1406956 -AGC-AGGAGTTT i proCoq1.NW_012148742v1 I 2 C 0 s otoGar3.GL873546 11275693 11 - 20685099 -TTC-AGGAGTTT i otoGar3.GL873546 I 2 C 0 s canFam3.chr1 112353797 12 - 122678785 -ACCCAAGAGTTT i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 534614 13 - 2150887 AAGCAAAGAATTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41562470 15 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=501764.000000 s hg38.chr18_GL383571v1_alt 181581 32 + 198278 TGGATTTCAGTGGGATTAAAATAGATTTGAAA s panTro5.chr18 65091629 32 + 78221452 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210535 32 + 77229886 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430058 32 + 17472758 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470567 32 - 152096393 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420342 32 + 70235451 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111660 32 - 75711847 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13670986 32 - 18804593 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282812 32 + 18905526 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111658 32 - 72318688 TGGATTTCAGTGAGATTAAAACAGATTTGAAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448149 32 - 1517660 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544020 32 + 6513552 TGGATTTCAGTGGGATTAAAATAGATTTGAAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315697 32 + 117903854 TGGATTTCAGTGGAATTAAAAGAGATTTCAAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502746 32 - 31320352 TGGATTTCAGTGAAATTAAAAGAGATTTCAAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698274 32 + 2203405 TGGATTTCAGTGAAATTAAAAGAGATTTCAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650672 32 - 14941987 TGGATTTCCGTGAAATTAAAAGAGATTTGAAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562485 32 + 83067054 TATATTTCAGTGGAATTAAAATAGATTGGAAA i micMur3.chr19 I 15 I 25 s proCoq1.NW_012148742v1 1302821 32 - 1406956 TATATTTCAGTGGAATTAAAATAGATTGGAAA i proCoq1.NW_012148742v1 C 0 I 45 s otoGar3.GL873546 11275704 32 - 20685099 TGTATTTCAGTGGAATTAAAATAGATTGGAAA i otoGar3.GL873546 C 0 I 2 s canFam3.chr1 112353809 31 - 122678785 TGAATATCAGTGGAATT-AAATAAATTGAAAA i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 534627 32 - 2150887 TGGCTATCACTGGAATTAAACTAGATTGGAAA i dasNov3.JH575754 C 0 I 2 e mm10.chr1 111874670 3978 + 195471971 I a score=201257.000000 s hg38.chr18_GL383571v1_alt 181613 24 + 198278 GTTAGGTGAGTTTAAAACAAATTT s panTro5.chr18 65091661 24 + 78221452 GTTAGGTGAGTTTAAAACAAATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210567 24 + 77229886 GTTAGGTGAGTTTAAAACAAATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430090 24 + 17472758 GTTAGGTGAGTTTAAAACAAATTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470599 24 - 152096393 GTTAGGTGAGTTTAAAACAAATTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420374 23 + 70235451 GTTAGGTGAGTTTAAAACAAA-TT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111692 23 - 75711847 GTTAGGTGAGTTTAAAACAAA-TT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671018 23 - 18804593 GTTAGGTGAGTTTAAAACAAA-TT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282844 23 + 18905526 GTTAGGTGAGTTTAAAACAAA-TT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111690 23 - 72318688 GTTAGGTGAGTTTAAAACAAA-TT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448181 23 - 1517660 GTTAGGTGAGTTTAAAACAAA-TT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544052 23 + 6513552 GTTAGGTGAGTTTAAAACAAA-TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315729 21 + 117903854 GTTAGGTAAGTTGGAAACAAA--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502778 21 - 31320352 GTTAGGTAAGTTGGAAACAAA--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698306 20 + 2203405 GTTAGGTAAGTTGGAAAC-AA--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650704 21 - 14941987 GTTAGGTAAGTTGGAAACAAA--- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11275738 23 - 20685099 GTCAAGTGGGTGAGAAGCAAG-TC i otoGar3.GL873546 I 2 C 0 s canFam3.chr1 112353843 23 - 122678785 GCCAAATATATTGGCAACAAA-TC i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 534661 22 - 2150887 GTAAATTTAATTAGAAACAAA-T- i dasNov3.JH575754 I 2 C 0 e micMur3.chr19 41562517 25 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302853 45 - 1406956 I a score=209536.000000 s hg38.chr18_GL383571v1_alt 181637 20 + 198278 AAAAAAATATTCAGAAACCC s panTro5.chr18 65091685 20 + 78221452 AAAAAAATATTCAGAAACCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210591 20 + 77229886 AAAAAAATATTCAGAAACCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430114 20 + 17472758 AAAAAAATATTCAGAAACCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470623 20 - 152096393 AAAAAAATATTCAGAAACCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420397 20 + 70235451 AAAGAAATATTCAGAAACAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111715 20 - 75711847 AAAGAAATATTCAGAAACCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671041 20 - 18804593 AAAGAAATATTCAGAAACCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282867 20 + 18905526 AAAGAAATATTCAGAAACCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111713 20 - 72318688 AAAGAAATATTCAGAAACCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448204 20 - 1517660 AAAGAAATATTCAGAAACCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544075 20 + 6513552 AAAGAAATATTCAGAAACCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315750 17 + 117903854 ---AAAATCCTCAGAAAGCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502799 17 - 31320352 ---AAAATCCTCAGAAAGTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698326 17 + 2203405 ---AAAATCCTCAGAAAGCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650725 17 - 14941987 ---AGAATCCTCAGAAAGCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562542 20 + 83067054 AAATAATTCTTCAGAAACAT i micMur3.chr19 I 25 C 0 s otoGar3.GL873546 11275761 20 - 20685099 AAATCCATCTTCAGAAACAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112353866 20 - 122678785 AAATAATTCTTCAGAGACCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 534683 16 - 2150887 ----AATTCCTCAGAAATTC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302853 45 - 1406956 I a score=440444.000000 s hg38.chr18_GL383571v1_alt 181657 29 + 198278 TTGAAGAAAATTATACCCATACATATTTT s panTro5.chr18 65091705 29 + 78221452 TTGAAGAAAATTATACCCATACATATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210611 29 + 77229886 TTGAAGAAAATTATACCCATACATATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430134 29 + 17472758 TTGAAGAAAATTATACCCATACATATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470643 29 - 152096393 TTGAAGAAAATTATACCTATACATATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420417 29 + 70235451 TTGAAGAAAATTATACCCATACACATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111735 29 - 75711847 TTGAAGAAAATTATACCCATACACATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671061 29 - 18804593 TTGAAGAAAATTATACCCATACACATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282887 29 + 18905526 TTGAAGAAAATTATACCCATACATATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111733 29 - 72318688 TTGAAGAAAATTATACCCATACACATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448224 29 - 1517660 TTGAAGAAAATTATACCCATACATATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544095 29 + 6513552 TTGAAGAAAATTATACCCATACATTTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315767 29 + 117903854 TTGAAGAAAAATATGTCCATACatatata i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502816 29 - 31320352 TTGAAGAAAAATATGTCCATACatatatt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698343 29 + 2203405 TTGAAGAAAAATATGTCCATATATATATT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3650742 29 - 14941987 TTGAAGAAAAATATGTCCATACATATATT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562562 28 + 83067054 TTGAAGAAAACT-TACCCATACATATTTT i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1302898 29 - 1406956 TTGAAGAAAACTATACCCATACGTATTTT i proCoq1.NW_012148742v1 I 45 I 91 s otoGar3.GL873546 11275781 29 - 20685099 TTGAAGAACACTATGCCCAGAGATATTTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112353886 29 - 122678785 TTGAAGAAAACTTCACCCATACATATTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 534699 28 - 2150887 TTGAAAAAAACTTTA-CCATACATATTTT i dasNov3.JH575754 C 0 I 1 e mm10.chr1 111874670 3978 + 195471971 I a score=215520.000000 s hg38.chr18_GL383571v1_alt 181686 36 + 198278 TTT-A----AAAAAATTAAGCAAAACT------CATTATTTCTAAGA- s panTro5.chr18 65091734 35 + 78221452 TTT------TAAAAATTAAGCAAACCT------CATTATTTCTAAGA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210640 36 + 77229886 TTT-T----AAAAAATTAAGCAAACCT------CATTATTTCTAAGA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430163 35 + 17472758 TTT-A----AAAAAATTAAGCAAAACT------CATTA-TTCTAAGA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470672 37 - 152096393 TTTAA----AAAAAATTAAGCAAAACT------CATTATTTCTAAGA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420446 31 + 70235451 TTT----------AATTAAGCAAAATT------CATTATTTTTAAGA- i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63111764 31 - 75711847 TTT----------AATTAAGCAAAATT------CATTATTTTTAAGA- i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13671090 31 - 18804593 TTT----------AATTAAGCAAAATT------CATTATTTTTAAGA- i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13282916 33 + 18905526 TTT--------AAAATTAAGCAAAATT------CATTATTTTTAAGA- i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60111762 32 - 72318688 TTT---------AAATTAAGCAAAATT------CATTATTTTTAAGA- i chlSab2.chr18 C 0 I 1 s manLeu1.NW_012106698v1 448253 33 - 1517660 TTT--------AAAATTAAGCAAAATT------CATTATTTTTAAGA- i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3544124 32 + 6513552 TTT---------AAATTAAGCAAAATT------CATTATTTTTAAGA- i colAng1.NW_012115433v1 C 0 I 1 s calJac3.chr13 105315796 37 + 117903854 tatat----ttttaattaaacaaaact------tattatttttaaGA- i calJac3.chr13 C 0 I 1 s saiBol1.JH378121 19502845 35 - 31320352 ttttt----aaaaaattaaacaaaac--------attatttttaaGA- i saiBol1.JH378121 C 0 I 1 s cebCap1.NW_016107689v1 1698372 35 + 2203405 TTTTT----AAAAAATTAAACAAAAC--------GTTATTTTTAAGA- i cebCap1.NW_016107689v1 C 0 I 1 s aotNan1.NW_018502140v1 3650771 36 - 14941987 TTTTTA---AAAAAATTAAACAAAAC--------ATTATTTTTAAGA- i aotNan1.NW_018502140v1 C 0 I 1 s micMur3.chr19 41562590 32 + 83067054 -----CTTTTAAAAATT----AAAAGT------CATTAATTTTAAGA- i micMur3.chr19 C 0 I 53 s otoGar3.GL873546 11275810 36 - 20685099 -----CTTGGAAAAATTAAACAAAACT------CAGTAATTTTAAGA- i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112353915 36 - 122678785 -----CTTTCTAAAATTAAATAAAACT------CTTTACTTTTAAGA- i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 534728 43 - 2150887 -----TTTTTTTAAGTTTGGTAAAACTATTTGCCATTACCATGTAGGC i dasNov3.JH575754 I 1 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302927 91 - 1406956 I a score=335962.000000 s hg38.chr18_GL383571v1_alt 181722 29 + 198278 TATCTGTGTATTCTGCAACTATATAGATT s panTro5.chr18 65091769 29 + 78221452 TATCTGTGTATTCTGCAACTATATAGATT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210676 29 + 77229886 TATCTGTGTATTCTGCAACTATATAGATT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430198 29 + 17472758 TACCTGTGTATTCTGCAACTATATAGATT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470709 29 - 152096393 TATCTGTGTATTCTGCAACTATATAGATT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420478 29 + 70235451 TATTGATGTATTCTGCAACTATATAGATT i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63111796 29 - 75711847 TATTGATGTATTCTGCAACTATATAGATT i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13671122 29 - 18804593 TATTGATGTATTCTGCAACTATATAGATT i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13282950 29 + 18905526 TGTTGATGTATTCTGCAACTATATAGATT i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60111795 29 - 72318688 TATTGATGTATTTTGCAACTATATAGATT i chlSab2.chr18 I 1 C 0 s manLeu1.NW_012106698v1 448287 29 - 1517660 TGTTGATGTATTCTGCAACTATATAGATT i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3544157 29 + 6513552 TCTTGATGTATTCTGCAACTACATAGATT i colAng1.NW_012115433v1 I 1 C 0 s calJac3.chr13 105315834 29 + 117903854 TATCTGTGTATTCTACAACCATGTAGATT i calJac3.chr13 I 1 I 22 s saiBol1.JH378121 19502881 29 - 31320352 TATCTGTGTATTCTACAACCATATAGATT i saiBol1.JH378121 I 1 I 22 s cebCap1.NW_016107689v1 1698408 29 + 2203405 TATCTGTGTATTCTACAACCATATAGATT i cebCap1.NW_016107689v1 I 1 I 22 s aotNan1.NW_018502140v1 3650808 29 - 14941987 TATCTGTGTATTCTACAACCATATAGATT i aotNan1.NW_018502140v1 I 1 I 343 s otoGar3.GL873546 11275847 29 - 20685099 TATCAGCTTATTCTGCTACTATAGAGTTT i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112353952 29 - 122678785 TATCGGCTTATGCTGAAACCATCTAGATT i canFam3.chr1 I 1 I 22 s dasNov3.JH575754 534771 29 - 2150887 TACTAGCTAATTCTGCAATCATATAGATG i dasNov3.JH575754 C 0 I 22 e micMur3.chr19 41562622 53 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302927 91 - 1406956 I a score=75622.000000 s hg38.chr18_GL383571v1_alt 181751 7 + 198278 CTTTGTA s panTro5.chr18 65091798 7 + 78221452 CTTTGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210705 7 + 77229886 CTTTGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430227 7 + 17472758 CTTTGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470738 7 - 152096393 CTTTGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420507 7 + 70235451 CTTTGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111825 7 - 75711847 CTTTGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671151 7 - 18804593 CTTTGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282979 7 + 18905526 CTTTGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111824 7 - 72318688 CTTTGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448316 7 - 1517660 CTTTGTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544186 7 + 6513552 CTTTGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315885 7 + 117903854 CTTTGTG i calJac3.chr13 I 22 C 0 s saiBol1.JH378121 19502932 7 - 31320352 CTTTGTG i saiBol1.JH378121 I 22 C 0 s cebCap1.NW_016107689v1 1698459 7 + 2203405 CTTTCTG i cebCap1.NW_016107689v1 I 22 C 0 s otoGar3.GL873546 11275876 7 - 20685099 ATTTGAA i otoGar3.GL873546 C 0 I 17 s canFam3.chr1 112354003 7 - 122678785 CTTCATG i canFam3.chr1 I 22 C 0 s dasNov3.JH575754 534822 7 - 2150887 TTTTGTG i dasNov3.JH575754 I 22 C 0 e micMur3.chr19 41562622 53 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302927 91 - 1406956 I e aotNan1.NW_018502140v1 3650837 343 - 14941987 I a score=9117.000000 s hg38.chr18_GL383571v1_alt 181758 3 + 198278 TTT-- s panTro5.chr18 65091805 3 + 78221452 TTA-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210712 3 + 77229886 TTA-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430234 3 + 17472758 TTA-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470745 3 - 152096393 TTA-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420514 3 + 70235451 TTA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111832 3 - 75711847 TTA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671158 3 - 18804593 TTA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282986 3 + 18905526 TTA-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111831 3 - 72318688 TTA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448323 3 - 1517660 TTA-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544193 3 + 6513552 TTA-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315892 3 + 117903854 TCA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502939 3 - 31320352 TTA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698466 3 + 2203405 TTA-- i cebCap1.NW_016107689v1 C 0 C 0 s micMur3.chr19 41562675 2 + 83067054 TT--- i micMur3.chr19 I 53 I 5 s otoGar3.GL873546 11275900 2 - 20685099 TT--- i otoGar3.GL873546 I 17 I 5 s canFam3.chr1 112354010 2 - 122678785 -TA-- i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 534829 3 - 2150887 --AAA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1302927 91 - 1406956 I e aotNan1.NW_018502140v1 3650837 343 - 14941987 I a score=28385.000000 s hg38.chr18_GL383571v1_alt 181761 2 + 198278 AT s panTro5.chr18 65091808 2 + 78221452 AT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210715 2 + 77229886 AT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430237 2 + 17472758 AT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470748 2 - 152096393 AT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420517 2 + 70235451 AT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111835 2 - 75711847 AT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671161 2 - 18804593 AT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282989 2 + 18905526 AT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111834 2 - 72318688 AC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448326 2 - 1517660 AT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544196 2 + 6513552 AT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315895 2 + 117903854 AT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502942 2 - 31320352 AT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698469 2 + 2203405 AT i cebCap1.NW_016107689v1 C 0 C 0 s micMur3.chr19 41562682 2 + 83067054 AT i micMur3.chr19 I 5 C 0 s proCoq1.NW_012148742v1 1303018 2 - 1406956 AT i proCoq1.NW_012148742v1 I 91 C 0 s otoGar3.GL873546 11275907 2 - 20685099 AT i otoGar3.GL873546 I 5 C 0 s canFam3.chr1 112354013 2 - 122678785 AC i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 534832 2 - 2150887 AC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e aotNan1.NW_018502140v1 3650837 343 - 14941987 I a score=1682289.000000 s hg38.chr18_GL383571v1_alt 181763 122 + 198278 AGATTTGATTTTTT---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATTCTATCCCTATTTCTTTCAAAAG--GGTACAGGTAATGAAATCAAAAGGAAAGCCATCTAAAGTTAAATTTA s panTro5.chr18 65091810 122 + 78221452 AGATTTGATTTTTT---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATTCTATCGCTATTTCTTTCAAAAG--GGTATGGGTAATGAAATCAAAAGGAAAGCCATCTAAAGTTAAATTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210717 122 + 77229886 AGATTTGATTTTTT---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATTCTATCGCTATTTCTTTCAAAAG--GGTATGGGTAATGAAATCAAAAGGAAAGCCATCTAAAGTTAAATTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430239 122 + 17472758 AGATTTGATTTTTT---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATTCTATCACTATTTCTTTCAAAAG--GGTACAGGTAATGAAATCAAAAGGAAAGTCATCTAAAGTTAAATTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470750 122 - 152096393 AGATTTGATTTTTT---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTGTTTGGTTGGGATTCTATCACTATTTCTTTTAAAAG--AGTACATGTAATGAAATTAAAAGGAAAGCCATCTAAAATTAAATTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420519 122 + 70235451 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATCAAATTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111837 122 - 75711847 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATCAAATTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671163 122 - 18804593 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATCAAATTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13282991 122 + 18905526 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATCAAATTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111836 122 - 72318688 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATCAAATTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448328 122 - 1517660 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATCAAATTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544198 116 + 6513552 AGATTTGATTTTTT---AAACGTGCTTTTGTGTAATTCTG---------------------------CTATGTGGTTGGAATTCTATCACTATTCCTTTCAAAAG--GGTACAGGTAGTG------AAAGGAAAGCCATCTAAAATCAAATTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105315897 125 + 117903854 AGATTTGATTTTTTTTAAAAAGCACTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGAATTCTATGACCATTTCTTTCAAAAG--TGTACAGGTAATAAAACTAAGAGAAAAACCATCTAAAATTAAATGTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19502944 122 - 31320352 AGATTTGATTTTTT---AAAAGCATTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATCCTATGACTATTTTTTTCAAAAG--TGTACAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATTAAATATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698471 122 + 2203405 AGATTTGATTTTTT---AAAAGCACTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATTCTGTGACAATTTCTTTCAAAAG--TGTGCAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATTAAATATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651180 122 - 14941987 AGATTTGATTTTTT---AAAAGCACTTTTGTGTAATTCTG---------------------------CTATTTGGTTGGGATTCTGTGACTATTTCTTTCCAAAG--TGTGCAGGTAATGAAATTAAAAGGAAAGCCATCTAAAATTAAATATA i aotNan1.NW_018502140v1 I 343 C 0 s micMur3.chr19 41562684 121 + 83067054 AGATTTAATTATTA---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTGTTTGGTTGGGATTATATGACTATTTCTTTCAAAAC--TGCATAGTTaattaacttaaaaggaaaacaatttaaa-ttaaattta i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1303020 121 - 1406956 AGATTTAATTATTA---AAAAGTGCTTTTGTGTAATTCTG---------------------------CTGTTTGGTTGGGATTATATAACTATTTCTTTCAAAAC--TGCACAGATTATTAACTTAAAAGGAAAACAGTCTAAA-TTAAATTTA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11275909 110 - 20685099 AGATTTAATTGCTA---AAGAGTG-TTTTGTTTAATTCTG---------------------------CTGTTTGGTCGAGATTATATGAACTGTTCTTTCAAAAC--TGCACAGGTAA-----TTAAAAAGAAAACAGT------GTAAATATA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112354015 122 - 122678785 AGATTTAGTTTAAA---AAAAGTGCTTCCATATAACTCTA---------------------------CCGCTTGGCTGGTATTATATGACCATTGTCCTCCACTT--TGTATGCATAATGAACTTAAAAAGAAAATAGTTTAAAATAAAATTTA i canFam3.chr1 C 0 I 200 s dasNov3.JH575754 534834 150 - 2150887 AGGCTTAATTTTT----AGAAGTGCCTCTGTATAATTGTGATAACATTTTCTCTAGAGTTATGTTGATTATTTGGTTGCTACTAGAATACTATTGCTTTCACAACTTGGCACAGATAATGATTTGAAAAGGaaaataatctaaaattaaattta i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=6750.000000 s hg38.chr18_GL383571v1_alt 181885 2 + 198278 GT- s panTro5.chr18 65091932 2 + 78221452 GT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210839 2 + 77229886 GT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430361 2 + 17472758 GT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470872 2 - 152096393 GT- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420641 2 + 70235451 GT- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111959 2 - 75711847 GT- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671285 2 - 18804593 GT- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283113 2 + 18905526 GT- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111958 2 - 72318688 GT- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448450 2 - 1517660 GT- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544314 2 + 6513552 GT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316022 2 + 117903854 CT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503066 2 - 31320352 CT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698593 2 + 2203405 CT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651302 2 - 14941987 CT- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562805 2 + 83067054 ct- i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1303141 2 - 1406956 CT- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11276019 2 - 20685099 CT- i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 534984 2 - 2150887 -ta i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e canFam3.chr1 112354137 200 - 122678785 I a score=757942.000000 s hg38.chr18_GL383571v1_alt 181887 57 + 198278 AAATATGAGTCATCCAAATGTTATGTTTTA--CCTAATCAAAAATAAAAATTAAACA-TC s panTro5.chr18 65091934 57 + 78221452 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAACA-TC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210841 57 + 77229886 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAACA-TC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430363 57 + 17472758 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAACA-TC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470874 57 - 152096393 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAACA-TC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420643 57 + 70235451 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAGCA-TC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63111961 57 - 75711847 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAGCA-TC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671287 57 - 18804593 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAGCA-TC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283115 57 + 18905526 AAATATGAGTCATCCAAATGTTATACTTTA--CCTAATCAAAAATAAAAATTAAGCA-TC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60111960 57 - 72318688 AAATATGAGTCATCCAAATGTTATATTTTA--CTTAATCAAAAATAAAAATTAAGCA-TC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448452 57 - 1517660 AAATATGAGTCATCCAAATGTTATACTTTA--CCTAATCAAAAATAAAAATTAAGCA-TC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544316 57 + 6513552 AAATATGAGTCATCCAAATGTTATATTTTA--CCTAATCAAAAATAAAAATTAAACA-TC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316024 50 + 117903854 AAATATGAGTCATTCAAATATTA-----TA--TCTAATCAAAA--TAAAGTTAAACA-TT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503068 55 - 31320352 AAATATGAATCATTAAAATGTTATATTTTA--TCTAATCAAAA--TGAGGTTAAACA-TT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698595 56 + 2203405 AAATACGAATCATTAATATGTTATATTTTA--TCTAATCAAAA--TGAAGTTAAACATTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651304 55 - 14941987 AAATATGAGTCATTCAAATGTTATATTTTA--TCTAATCAAAA--TGAAGTTAAACA-TT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562807 53 + 83067054 aaatatgaattaTGCAAA---TATATTTTA--CCTAATC-AAAATAAAAAGTAAACA-TC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1303143 56 - 1406956 AAATATGAATTATGCAAATATTATATTTTA--CTTCATC-AAAATAAAAACTAAACA-TC i proCoq1.NW_012148742v1 C 0 I 477 s otoGar3.GL873546 11276021 59 - 20685099 ACATATGAATTATGCAAATTTAACATTTTAATCCGAATCAAAAATAAAAATTAAATA-TC i otoGar3.GL873546 C 0 I 3 s canFam3.chr1 112354337 56 - 122678785 AAATAGAAATCATTTAGATGTTATATTTTA--CCTAATCAAAAAT-AAAATTAAATG-CC i canFam3.chr1 I 200 C 0 s dasNov3.JH575754 534986 54 - 2150887 aaatatGAGTCATGCAAATGTTATCTTTTG--CTTAATCAAAAAGAGAAATAAAGC---- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I a score=64299.000000 s hg38.chr18_GL383571v1_alt 181944 5 + 198278 CATAA s panTro5.chr18 65091991 5 + 78221452 CATAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210898 5 + 77229886 CATAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430420 5 + 17472758 CATAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470931 5 - 152096393 CATAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420700 5 + 70235451 CATAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112018 5 - 75711847 CATAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671344 5 - 18804593 CATAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283172 5 + 18905526 CATAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112017 5 - 72318688 CATAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448509 5 - 1517660 CATAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544373 5 + 6513552 CATAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316074 5 + 117903854 TATAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503123 5 - 31320352 TATAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1698651 5 + 2203405 TATAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651359 5 - 14941987 TATAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41562860 5 + 83067054 TATAA i micMur3.chr19 C 0 I 171 s otoGar3.GL873546 11276083 5 - 20685099 TTTAA i otoGar3.GL873546 I 3 C 0 s canFam3.chr1 112354393 5 - 122678785 TATAA i canFam3.chr1 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303199 477 - 1406956 I e dasNov3.JH575754 535040 0 - 2150887 C a score=1394824.000000 s hg38.chr18_GL383571v1_alt 181949 149 + 198278 ATATT-----------------------------------------------------TTATATTCTATAT-ATTGTTATGTAATTTACATAATATAAGCATATTTTAAAAATCA--AGTTTTATATATATCTA----TTTGAATC-TTTACTTCATTAAAA-AAA---TGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA s panTro5.chr18 65091996 148 + 78221452 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTATGTAATTTACATAATATAAGGATATTTTAAAAATCAGTAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-AAA-AAA---TGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64210903 148 + 77229886 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTATGTAATTTACATAATATAAGGATATTTTAAAAATCAGTAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-AAA-AAA---TGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430425 150 + 17472758 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTATGTAATTTACATAATATAAGGATATTTTAAAAATCAATAGTTT--TATGTATCTA----TTTGAATC-TTTACTTCATT-AAA-AAA-ATTGACATATTCGAATTACCCCAATTGCCATGACCTTAGTTATAGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139470936 202 - 152096393 ATATTTTATATTATATGTATTGTTACATAATTTACATATTCTATGTATTTTTACATAATTATATTCTATGT-ATTGTTACATAATTTACATAATATAAGGATATTTTAAAAATCAATAGTTT--TATATATCTA----TTTGAATC-TTCACTTCATT-AAA-AAA--TTGACATATTCAAATTACCTGAATTGCTATGACCTTAGTTATAGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420705 137 + 70235451 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTACATAATTTATATAATGTAAGGATAGTTTAAAAATCGATAGTTT--TATATATCTA----TTTG-ATC-TTTACTTCATT-TAACAAA-ATTGACATATTCAAATTACCTCAATT-------------CTATGATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112023 150 - 75711847 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTACATAATTTATATAATATAAGGATAGTTTAAAAATCGATAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-TAA-AAA-ATTGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671349 150 - 18804593 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTACATAATTTATATAATATAAGGATAGTTTAAAAATCGATAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-TAA-AAA-ATTGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283177 150 + 18905526 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTACATAATTTACATAATATAGGGATAGTTTAAAAATTGATAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-TTA-AAA-ATTGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112022 150 - 72318688 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTGCATAACTTACATAATATAAGGATAGTTTAAAACTTGATAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-TAA-AAA-ATTGACGTATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448514 150 - 1517660 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTACATAATTTACATAATATAAGGATAGTTTAAAAATTGATAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-TTA-AAA-ATTGACATATTCAAATTACCTCAATTGCTATGACCTTAGTTATAGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544378 150 + 6513552 ATATT-----------------------------------------------------TTATATTCTATGT-ATTGTTACATAATTTACATAATATAAGGATAGTTTAAAAATTGATAGTTT--TATATATCTA----TTTGAATC-TTTACTTCATT-TAA-AAA-ACTGACATATTCAAATGACCTCAATTGCTATGACCTTAGTTATAGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316079 136 + 117903854 ATATT-----------------------------------------------------TTCTATTCTATGT-ATTGTT--------------ACATAAGGACA-TTTATTAATCAGTAGTTT--TATATATCGATTATTTTGAATC-TTTACTTCATT-AA--AAA-ATGGAAATATGCAAATTACCTCAAATGCTATGACCTTAGTTATAG-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503128 139 - 31320352 ATATT-----------------------------------------------------TTCTATTCTATGT-GTTGTT--------------ATATAAGGACATTTTAAAAATCAGTAGTTT--TATATATCGATTATTTTGAATC-GTTACTTCATT-AA--AAA-ATGGACATATGCAAATTACCTCAAATGCTATGATCCTAGTTATAGTG i saiBol1.JH378121 C 0 I 10 s cebCap1.NW_016107689v1 1698656 139 + 2203405 ATATT-----------------------------------------------------TTCTATTCTATGT-ATTGTT--------------ATATAAGGACATTTTAAAAATCAGTAGTTT--TATACATTGATTATTTTGAATC-TTTACTTCATT-AA--AAA-ATGGACATATGTAAATTACCTCAAATGCTATGACCTTAGTTATAGTG i cebCap1.NW_016107689v1 C 0 I 240 s aotNan1.NW_018502140v1 3651364 136 - 14941987 ATATT-----------------------------------------------------TTCTATTGTATGT-ATTGTT--------------ATATAAGGACATTTTAAAAATCAATAGTTT--TATAT----ATTATTTTGAATC-TTTACTTCATT-AAG-AAA-ATGGACATATGCAAATTACCTCAAATGCTATGACCTTAGTtatagta i aotNan1.NW_018502140v1 C 0 I 4 s otoGar3.GL873546 11276088 145 - 20685099 TTAGA-----------------------------------------------------CTCCATTCTATCT-ATTGCT---------GTATAATGAGAGGCTATTTAAAAAATCAACAGTTT--TATATATTTATTTCTTAGAATC-TTTACTTCACA-TAA-AAA-GTTGAACTGCCCAAATTACTGCCAATGTTAAGGACTTAGTTGTAGGa i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112354398 147 - 122678785 ATATT-----------------------------------------------------ACTTATTTAACCT-ATGGTC---------ATATAATATAAGGATATTTTTTAAATAAATAGTTT--TGTATCACTCTCATTTAGAATCTTTTGCTTTATA-AAA-AAAGATTGACATATTCAAGTTTCCTCTAATGCTAAGGGCTTAGTTGTAGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535040 139 - 2150887 ---TC-----------------------------------------------------CTATATTTTGTATAATTGTT---------AAATAGTATCAGAATACTTTAAAAAT----AGTTG--TATATCTCTATTACTTAGAATCTTTTACTTTAC--AAA-AGT-GTTGACATATTCAAGTTACCTCAAATGCTAAGAGCTTAGTTTCAGAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41562865 171 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303199 477 - 1406956 I a score=69233.000000 s hg38.chr18_GL383571v1_alt 182098 6 + 198278 TATATA s panTro5.chr18 65092144 6 + 78221452 TATATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211051 6 + 77229886 TATATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430575 6 + 17472758 TATATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471138 6 - 152096393 CATATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420842 6 + 70235451 TATATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112173 6 - 75711847 TATATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671499 6 - 18804593 TATATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283327 6 + 18905526 TATATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112172 6 - 72318688 TATATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448664 6 - 1517660 TATATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544528 6 + 6513552 TATATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316215 2 + 117903854 ----TA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503277 6 - 31320352 TATATA i saiBol1.JH378121 I 10 C 0 s cebCap1.NW_016107689v1 1699035 6 + 2203405 tatata i cebCap1.NW_016107689v1 I 240 C 0 s aotNan1.NW_018502140v1 3651504 6 - 14941987 tatata i aotNan1.NW_018502140v1 I 4 C 0 s otoGar3.GL873546 11276233 6 - 20685099 tatata i otoGar3.GL873546 C 0 I 252 s canFam3.chr1 112354545 6 - 122678785 GATACG i canFam3.chr1 C 0 I 6 s dasNov3.JH575754 535179 6 - 2150887 TATTTG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41562865 171 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303199 477 - 1406956 I a score=129154.000000 s hg38.chr18_GL383571v1_alt 182104 11 + 198278 TAAAAATCCAG s panTro5.chr18 65092150 11 + 78221452 TAAAAATCCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211057 11 + 77229886 TAAAAATCCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430581 11 + 17472758 TAAAAATCCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471144 11 - 152096393 TAAAAATCCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420848 11 + 70235451 TAAAAATCCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112179 11 - 75711847 TAAAAATCCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671505 11 - 18804593 TAAAAATCCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283333 11 + 18905526 TAAAAATCCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112178 11 - 72318688 TAAAAATCCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448670 11 - 1517660 TAAAAATCCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544534 11 + 6513552 TAAAAATCCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316217 11 + 117903854 TATATATCCAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503283 11 - 31320352 TATATATCCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699041 11 + 2203405 tataaatCCAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651510 11 - 14941987 tataaatCCAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11276491 11 - 20685099 tataAATTTAA i otoGar3.GL873546 I 252 C 0 s canFam3.chr1 112354557 11 - 122678785 CAAAAGTAGAG i canFam3.chr1 I 6 C 0 s dasNov3.JH575754 535185 11 - 2150887 TAAAAATATAG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41562865 171 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303199 477 - 1406956 I a score=762148.000000 s hg38.chr18_GL383571v1_alt 182115 56 + 198278 AA------------------GTTCAGAAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAGATAC s panTro5.chr18 65092161 56 + 78221452 AA------------------GTTCAGAAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAGATAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211068 56 + 77229886 AA------------------GTTCAGAAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAGATAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430592 56 + 17472758 AA------------------GTTCAGAAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAGATAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471155 56 - 152096393 AA------------------GTTCAGGAAGTATTTTATCAGTTCCATAGAAAACTTAAATTATGTTCAAGATAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420859 55 + 70235451 AA------------------GTTCAGAAAGTATTTTATCAGTTCCACAGAAAATTGAAA-TATGTTTAAGATAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112190 55 - 75711847 AA------------------GTTCAGAAAGTATTTTATCAGTTCCACAGAAAATTGAAA-TATGTTTAAGATAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671516 55 - 18804593 AA------------------GTTCAGAAAGTATTTTATCAGTTCCACAGAAAATTGAAA-TATGTTTAAGATAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283344 56 + 18905526 AA------------------GTTCAGAAAGTATTTTATCAGTTCCACAGAAAATTGAAATTATGTTTAAGATAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112189 56 - 72318688 AA------------------GTTCAGAAAGTATTTTATCAGTTCCATAGAAAATTGAAATTATGTTTAAGATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448681 56 - 1517660 AA------------------GTTCAGAAAGTATTTTATCAGTTCCACAGAAAATTGAAATTATGTTTAAGATAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544545 56 + 6513552 AA------------------GTTCAGAAAGGATTTTATCAGTTCCACAGAAAATTGAAATTATGTTTAAGATAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316228 56 + 117903854 AA------------------GTTCAGAAAGTATTTTATCAGTTCCACAGAAAACTGAAATTATGTTCAAGAGAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503294 56 - 31320352 AA------------------GTTCAGAAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAAAGAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699052 56 + 2203405 AA------------------GTTCAGCAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAAAGAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651521 56 - 14941987 AA------------------ATTCAGAAAGTATTTTATCAGTTCCATAGAAAACTGAAATTATGTTCAAGAGAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41563036 56 + 83067054 AA------------------GTTCAGAAAACATTTTATGAGCCCCATAGAAAACTGCAATTTTGTTCAAGATAC i micMur3.chr19 I 171 I 434 s otoGar3.GL873546 11276502 56 - 20685099 AA------------------CTTCAGAAAGCATTTTATGAGCCCCATGGAAAACTATAATTTTGTTCAAGATAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112354568 74 - 122678785 AATGtattttattatttttttttaaaGAAGTATTTTATAAGCTCCACAGGAAATTGAACTTTTGTTCACAGCAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535196 56 - 2150887 AA------------------GTACAGACAGTATCTTATGAGTCCCGTAAGAAACTGGAATTTTGCTCAAGATAC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303199 477 - 1406956 I a score=1568168.000000 s hg38.chr18_GL383571v1_alt 182171 155 + 198278 TCTGAAGA--------------------------------TCTGGT-ACTTAGATATTAGATATTTGGACAATTCTCACCTCCACTTACTGGTT---------------------------------ACTCTA-AATGTTAGCAACTCACTTAGTCCTTCTGTAATGGCTCAT----AGGAA---------------ACCCCCCAGGCACCG----GATTTAATTGAATCATTCTGTATGGGAGG s panTro5.chr18 65092217 155 + 78221452 TCTGAAGA--------------------------------TCTGGT-ACTTAGATATTAGATATTTGGACAATTCTCACCTCCACTTACTGGTT---------------------------------ACTCTT-AATGTTAGCAACTCACTTAGTCCTTCTGTAATGGCTCAT----AGGAA---------------ACCCCCCAAGCACCG----GATTTAATTGAATCATTCTGTATGGGAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211124 155 + 77229886 TCTGAAGA--------------------------------TCTGGT-ACTTAGATATTAGATATTTGGACAATTCTCACCTCCACTTACTGGTT---------------------------------ACTCTT-AATGTTAGCAACTCACTTAGTCCTTCTGTAATGGCTCAT----AGGAA---------------ACCCCCCAAGCACCG----GATTTAATTGAATCATTCTGTATGGGAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430648 155 + 17472758 TCTGAAGA--------------------------------TCTGGT-ACTTAGATATTAGATATTTGGACAATTCTCACCTCTGCTTACTGGTT---------------------------------ACTCTT-AATGTTAGCAACTCACTTAGTCCTTCTGTAACGGCTCAT----AGGAA---------------ACTCCCCAAGCACCG----GATTTAATTGAATCATTCTGTATAGGAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471211 148 - 152096393 TCTGAAGA--------------------------------TCTGGT-AC-------TTAGATATTTGGACAATTCTCACCTCCACTTACTGGTT---------------------------------ACTCTT-AATGTTAGCAACTCACTTAGTCCTTCTGTAATGGCTCAT----AGGAA---------------ACTCCCCAAGCACTG----GATTTAATTGAATCATTCTGTATGGAAGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57420914 148 + 70235451 TCTGAAGA--------------------------------TCTGGT-AC-------TTACATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGAAACTCACTTAGTCCTCCCGTAATGGTTCAT----AGGAA---------------ACTCCCCAAGCACCG----GATTTAATTGAATCATTCTGTATGGGAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112245 148 - 75711847 TCTGAAGA--------------------------------TCTGGT-AC-------TTACATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGAAACTCACTTAGTCCTCCCGTAATGGTTCAT----AGGAA---------------ACTCCCCAAGCACCG----GATTTAATTGAATCATTCTGTATGGGAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671571 148 - 18804593 TCTGAAGA--------------------------------TCTGGT-AC-------TTACATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGAAACTCACTTAGTCCTCCCGTAATGGTTCAT----AGGAA---------------ACTCCCCAAGCACCG----GATTTAATTGAATCATTCTGTATGGGAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283400 148 + 18905526 TCTGAAGA--------------------------------TCTGGT-AC-------TTACATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGCAACTCACTTAGTCCTTCTGTAATGGCTCAT----AGGAA---------------ACTCCCCAAGCCCCG----AATTTAATTGAATCATTCTGTATGGGAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112245 148 - 72318688 TCTGAAGA--------------------------------TCTGGT-AC-------TTAGATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGCAACTCACTTGGTCCTTCTGTAATGGTTCAT----AGGAA---------------ACTCCCCAAGCACCG----GATTTAATTGAGTCATTCTATATGGGAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448737 180 - 1517660 TCTGAAGATCTGGTACTTACATATTTGGACAACTCTCACCTCTGGT-AC-------TTACATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGCAACTCACTTAGTCCTTCTGTAATGGCTCAT----AGGAA---------------ACTCCCCAAGCCCCG----AATTTAATTGAATCATTCTGTATGGGAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544601 148 + 6513552 TCTGAAGA--------------------------------TCTGGT-AC-------TTAGATATTTGGACAACTCTCACCTCCACTTACTGGTT---------------------------------ATTCTT-AATGTTAGGAACTCA----GTCCTTCTGCAACGGCTCAT----AGGAA---------------ACTCCCCAAGCACCGGCCAGATTTAATTGAATCATTCTGTATGGGAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316284 149 + 117903854 TTTAAAGA--------------------------------TCTGTTAAC-------TTACATAGTTGGACAATTCTCACCTCCACTTACAGGTT---------------------------------ACTCTGAAATGCTAGCAACTCACTTAGTCCTTCTGTAATAGCTCAT----AGGAA---------------ACT-CCCAAGCACCA----GATTGAATTGAATTTTTCTGTATGGGAGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503350 147 - 31320352 TTTAAAGA--------------------------------TCTGGT-AC-------TTACCTAGTTGGACAATTCTCACTTCCACTGACTGGTT---------------------------------ACTCTG-AATGCTAGAAACTCACTTAGTCCTTCTGTAATAGTTCAT----AGGAA---------------AGT-CCCAAGCACCA----GATTTAATTGAGTTTTTCTGTATGGGAGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699108 148 + 2203405 TTTAAAGA--------------------------------TCTGGT-AC-------TTACATAGTTGGACAATTCTCACCTCCACTGACTGATT---------------------------------ACTCTGAAATGCTAGCAACTCACTTAATCCTTCTGTAATAGCGCAT----AGGAA---------------ACT-CCCAAGCACCA----GATTTAATTGAGTTTTTCTGTATGGGAGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651577 148 - 14941987 TTTAAAGA--------------------------------TCTGGT-AC-------TTACATAGTTGGACAATTCTCAGCTCCACTTACTGGTT---------------------------------ACTCTGAAATGCTAGCAACTCACTTAGTCCTTCTGTAATAGCTCAC----AGGAA---------------ACT-CCCAAGCACCA----GATTTAATTGAATTTTTCTGTATGGGAAC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11276558 162 - 20685099 CATAAGGA--------------------------------TATGta-at-------ttatatatttgaatttttttaatttCCATCTATGGGTC-----------------------TGCTTCTTTGACTCTT-GACATTAGCAACTAACTTAGTTCTTCTGTAAGGGCTCATCCTAAATGA---------------ACTCCCCAAGCACTA----GACTTAATTAAGTCATTCTATATGGGAAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112354642 179 - 122678785 CTTGAAGA--------------------------------TCAAGA-AC-------TTAAGTATATTGACTATTCTGACCTCCATTTACTGGTTTTCTGACAGTGTT------AGTCTGCTTCTATGGCTCTT-GACACCAGAAACTTAATCAGTCCCTCTACAGTGGCACACACTAAATGA---------------ACTACTCAGCCATTG----GATTTCACTGACTTAATCTGTATGGGGAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535252 191 - 2150887 TCTAAAGA--------------------------------TCAAGC-AC-------TTAGATATTTTGCCAATTCTAAACTCCATTTACTATAT-TTTGCCATTATTATTCTGAGTCTGCTTCTATGACTATT-GACAATAGAAATTCA----GTCTCTCTCTAATGGCTCAT----ACTAAATGATCCTCCCCCCCACCCCCCAAACACTG----GATTTGACAGAATCAGTCTGTGCAGAGAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563092 434 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303199 477 - 1406956 I a score=693412.000000 s hg38.chr18_GL383571v1_alt 182326 57 + 198278 TCTTATAGCCACCGCTCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG s panTro5.chr18 65092372 57 + 78221452 TCTTATAGCCACCGCTGTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211279 57 + 77229886 TCTTATAGCCACCGCTCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430803 57 + 17472758 TCTTATAGCCACTGCTCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471359 57 - 152096393 TCTTGTAGCTGCCGCTCTAATGAAAGTCTTACTTTAATTCTACTGGCCAGTCAGCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421062 57 + 70235451 TCTTGTAGCCACTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112393 57 - 75711847 TCTTGTAGCCACTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671719 57 - 18804593 TCTTGTAGCCACTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCACCTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283548 57 + 18905526 TCTTGTAGCCACTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCACTCAGCTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112393 57 - 72318688 TCTTGTAGCCACTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448917 57 - 1517660 TCTTGTAGCCACTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCACTCAGCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544749 57 + 6513552 TCTTGTAGCCGCTGCCCTAATGAAAGTCTTACTTTAATTCTGCTGGCCAGTCAGCTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316433 54 + 117903854 TCTTGTAGCCACTACTCT-GTGAAAGTCCTACTTTAA--CTGCTGATCAGTCAGCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503497 57 - 31320352 TCTTGTAGCCACCACCTTAATGAAAGTCCTACTTTAACTCTGCTGATCAGTCAGCTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699256 57 + 2203405 TCTTGTAGCCACTACTCTAATGAAAGTCCTACTTTAACTCTGCTGATCAGTCAACTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651725 57 - 14941987 TCTTGTAGCCACTACTCTAATGAAAGTCCTACTTTAACTCTGCTGATCAGTCAGCTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1303676 57 - 1406956 TCTTATAGCCAGAGCTCTAATGAGAGGCCTACTTTAACTCTGCTGGCCAGTGAGCTG i proCoq1.NW_012148742v1 I 477 I 106 s otoGar3.GL873546 11276720 56 - 20685099 CCTTGTAGCCAGAGCTCTAATGAAAGGTCTACTTGGACTTTCCTGG-CAGGAAGCTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112354821 54 - 122678785 GACTATAGCCAGTGCTCT---CAAAGTCCTATTGGGATGTTGCTGGCCAGTCTGCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535443 48 - 2150887 TACATTAGCCAGTGCTTGCATCTAAGTCCTACTCAAAATACCCTGGCA--------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563092 434 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I a score=1076361.000000 s hg38.chr18_GL383571v1_alt 182383 109 + 198278 TAGCCAACTGGGCAAGGTTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCTCTTAAGACAGGCCTGTATGTGTGCG-----TCCCTTGCAGGACTTGGGTTATGTAG s panTro5.chr18 65092429 109 + 78221452 TAGCCAATTGGGCAAGGTTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCTCTTAAGACAGGCCTGTATGTGTGAG-----TCCCTTGCAGGACTTGGGTTATGTAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211336 109 + 77229886 TAGCCAATTGGGCAAGGTTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCTCTTAAGACAGGCCTGTATGTGTGAG-----TCCCTTGCAGGACTTGGGTTATGTAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430860 109 + 17472758 TAGCCAACTGGGCAAGGTTCTAATTGGTC-AAAGTGCTATAATTTGTTTGAAGACCCCTCTTAAGACAGGCCTGTATGTGTGAG-----TCCCTTGCAGGACTTGGGTTATGCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471416 109 - 152096393 TAGCCAACTGGGCAAGGTTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACTCCTCTTAAGACAGGCCTGTGTGTGTGAA-----TCCCTTGCAGGACTTGGGTTATGTAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421119 114 + 70235451 TAGCCAACTGGGCAAGGCTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCCCTTAAGACAGGCCTGTATGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112450 114 - 75711847 TAGCCAACTGGGCAAGGCTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCCCTTAAGACAGGCCTGTATGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671776 114 - 18804593 TAGCCAACTGGGCAAGGCTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCCCTTAAGACAGGCCTGTATGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283605 114 + 18905526 TAGCCAACTGGGCAAGGTTCTAAGTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCACCTTAAGACAGGCCTGTATGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112450 114 - 72318688 TAGCCAATTGGGCAAGGTTCTAATTGTTC-AAAGCGCTATAATTTGTTTGAAGACCCCCCTTAAGACAGGCCTGTATGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 448974 114 - 1517660 TAGCCAACTGGGCAAGGTTCTAAGTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCCCCTTAAGACAGGCCTGTATGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544806 114 + 6513552 TAGTCAACTGGGCAAGGTTCTAATTGGTC-AAAGCGCTATAATTTGTTTGAAGACCCTCCTTAAGACAGGCCTGTAGGTGTGAGTCCCTTCCCTTCCAGGACTTGGGTTATACAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316487 107 + 117903854 TAGCCAATTGGGCAAGGTTCTG--TGGTCAAAAGCATTATAATTTGTTTGAAGACCC-TCTTAATACAGGCCTCTATGTGTGAG-----TCCCTTCCAGGAGTTGGGTTATGTAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503554 107 - 31320352 TAGTCAATCGGGCAAGGTTCTG--TGGTCAAAAGCATTATAATTTGTTTGAAGACCC-TCTTAATACAGGCCTGTATGTGTGAG-----TCCCTTCCAGGAGTTGGGTTATGTAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699313 105 + 2203405 TAGCCAACTGGGCAAGGTTC----TGGTCAAAAGCATTATAATTTGTTTGAAGACCC-TCTTAATACAGGCCTGTATGTGTGAG-----TCCCTTCCAGGAGTTGGGTTATGTAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651782 107 - 14941987 TAGCCAATTGGGCAAGGTTCTG--TGGTCAAAAGCATTATAATTTGTTTGAAGACCC-TTTTAATACAGGCCTGTATGTGTGAG-----TCCCTTCCAGGAGTTGAGTTATGTAG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11276776 89 - 20685099 -------CTGGTTGTGG--------GGTC-AAAGCATTAGAACTTGTCTGTAGGCCC--CTTGAAAGCAGAGTGTACATGACAG-----TGCTTTGCAGGACTGTGTCCAAA--- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112354875 103 - 122678785 AGACCAAGTGGGCAGAGTTGTG--TGGTC-AAA--ACCATGACTTGTTTGAAAGCCT-TCTTGGAAAGGGCCTGGATACACAAG------GTCTTGCAAGTTGTGTGTCATACAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535491 85 - 2150887 ------------------------TGGTAAAAACCATAATGACCTGTTTGAGGGCTG-CCTTGGAAGGGACCGGTATATGCACA-----TTCCTTTCATTTCTTGTGCTGTACAG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563092 434 + 83067054 I e mm10.chr1 111874670 3978 + 195471971 I e proCoq1.NW_012148742v1 1303733 106 - 1406956 I a score=-5253.000000 s hg38.chr18_GL383571v1_alt 182492 1 + 198278 A s panTro5.chr18 65092538 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211445 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430969 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471525 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421233 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112564 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671890 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283719 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112564 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449088 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544920 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316594 1 + 117903854 C i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503661 1 - 31320352 C i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699418 1 + 2203405 C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651889 1 - 14941987 C i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111878648 1 + 195471971 A i mm10.chr1 I 3978 C 0 s canFam3.chr1 112354978 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535576 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563092 434 + 83067054 I e proCoq1.NW_012148742v1 1303733 106 - 1406956 I e otoGar3.GL873546 11276865 0 - 20685099 C a score=980730.000000 s hg38.chr18_GL383571v1_alt 182493 77 + 198278 AGCCCT---AGCACTCTTGCTGATTCTTGATCCTCAAAT-T-T-AGAAGAGGAAAGGACCTTAG---TGGGTAATGTAAGCTAAC-T s panTro5.chr18 65092539 77 + 78221452 AGCCCT---AGCACTCTTGCTGATTCTTGATCCTCAAAT-T-T-AGAAGAGGAAAGGACCTTAG---TGGGTAATGTAAGCTAAC-T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211446 77 + 77229886 AGCCCT---AGCACTCTTGCTGATTCTTGATCCTCAAAT-T-T-AGAAGAGGAAAGGACCTTAG---TGGGTAATGTAAGCTAAC-T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5430970 77 + 17472758 AGCCCT---AGCACTCTTGCTGATTCTTGATCCTCAAAT-T-T-AGAAGAGGAAAGGACCTTAG---TGGGTAATGTAAGTTAAC-T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471526 77 - 152096393 AGCCCT---AGCACTCTTGCTGATTCTTGATCCTCAAAT-T-T-AGAAGAGGAAAGGACCTTAG---TGGTTAATGTAAGCTAAC-T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421234 76 + 70235451 AGCCCT---AGCACTCTTGCTGATTCTTCatcctcaaat-t-t-agaacaggaaaggaccttag---tgg-taatgtaaactaac-t i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112565 76 - 75711847 AGCCCT---AGCACTCTTGCTGATTCTTCatcctcaaat-t-t-agaacaggaaaggaccttag---tgg-taatgtaaactaac-t i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671891 76 - 18804593 AGCCCT---AGCACTCTTGCTGATTCTTCatcctcaaat-t-t-agaacaggaaaggaccttag---tgg-taatgtaaactaac-t i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283720 76 + 18905526 AGCCCT---AGCACTCTTGCTGATTCTTCatcctcaaat-t-t-agaacaagaaaggaccttag---tag-taatgtaaactaac-t i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112565 76 - 72318688 AGCCCT---AGCACTCTTGCTGATTCTTCATCCTCACAT-t-t-agaacaggagaggaccttag---tgg-taatgtaaactaac-t i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449089 76 - 1517660 AGCCCT---AGCACTCTTGCTGATTCTTCATCCTCAAAT-T-T-AGAACAAGAAAGCACCTTAG---TAG-TAATGTAAACTAAC-T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544921 76 + 6513552 AGCCCT---AGCACTCTTGCTGATTCTTCATCCCCAAAT-t-t-agaacaggaaaagaccttag---tgg-taatgtaaactaac-t i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316595 79 + 117903854 AGACCT---AGCACTTTTGCTGATCCTTGATTCTCAAAT-T-T-AGAACAGAAAAGGACCTTAGTGATGA-TAATGTAAGCTACC-T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503662 76 - 31320352 AGCCCT---AGCACTCTTGCTGATCCTTGATTCTCAAAT-t-t-agaacaggaaaggaccttag---tgg-taatgtaagctacc-t i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699419 76 + 2203405 AGCCCT---AGCACTCTTGCTGATCCTTGATTCTCAAAT-t-t-agaacaggaaaggaccttag---tgg-taatgtaagctacc-t i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651890 76 - 14941987 AGCCCT---AGCACTCTTGCTGATCCTTGATTCTCAAAT-t-t-agaacaggaaaggaccttag---tgg-taatgtaagctacc-t i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1303839 75 - 1406956 AGCCCT---AGCACTTTTGATGATTCCTGattctaaaatct-t-agaacaggaagggaacttag---tgg--aatataagctaac-- i proCoq1.NW_012148742v1 I 106 C 0 s otoGar3.GL873546 11276865 77 - 20685099 AGCCCT---AGAACTTTTGCTGATTCTTGATATTAAAATCT-T-GGACGGGGAAGTGACTTTAG---TGG-AAATATAAGCTAACG- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111878649 74 + 195471971 AGTCCTTGCAGGACTTTTACTG--TTTTGGTCCTAAAAT-T-TCAGAATTATAA---ACCTTAT---GAG-TAA-ATAAGCTTAT-T i mm10.chr1 C 0 C 0 s canFam3.chr1 112354979 77 - 122678785 AGTTCT---AGCACTTTTCCCGATTCTCGATCCTAAAGT-TGT-TGAACAGGAAGTGGCCTTTA---TGA-TAATATAAACTAAC-C i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535577 69 - 2150887 AGTCTT---AGCAATCTTGCTAATTCTTTATCCTAACAT-T-TAAGACCAGGAAGGAGCCTTAG---TGG----TATAAAC------ i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563092 434 + 83067054 I a score=995712.000000 s hg38.chr18_GL383571v1_alt 182570 65 + 198278 CCTCA--TTTTGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTTTCATCGAATTC s panTro5.chr18 65092616 65 + 78221452 CCTCA--TTTTGTCCTGAAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTTTCATCGAATTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211523 65 + 77229886 CCTCA--TTTTGTCCTGAAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTTTCATCGAATTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431047 65 + 17472758 CCTCA--TTTTGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTTTCATCGAATTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471603 65 - 152096393 CCTCA--TTTTGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTTTCATTGAATTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421310 65 + 70235451 cctca--ttttGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTCTCATCGAATTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112641 65 - 75711847 cctca--ttttGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTCTCATCGAATTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13671967 65 - 18804593 cctca--ttttGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTCTCATCGAATTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283796 65 + 18905526 cctca--ttttGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTCTCATCGAATTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112641 65 - 72318688 cctca--ttttGTCCCGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTCTCATCGAATTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449165 65 - 1517660 CCTCA--TTTTGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTGATTTTAATCTTCTCATCGAATTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3544997 65 + 6513552 cctca--ttttGTCCTGGAGAAAA--GATCATTGTTTC-ACTTACTAATTTTAATCTTCTCATCGAATTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316674 65 + 117903854 CCTCA--TTTTGTCCTGGAGAAAA--GATCATTGTTTC-ACTTGCTGATTCTAATCTTTTCATAGAATTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503738 65 - 31320352 cttca--ttttgtcctggAGAAAA--GATCATTGCTTC-ACTTGCTGATTCTAATCTTTTCATATAATTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699495 65 + 2203405 cttca--ttttGTCCTGGAGAAAA--GATCATTGCTTA-ACTTGCTGATTCTAATCTTTTCATAGAATTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3651966 65 - 14941987 cctca--ttttGTCCTGGAGAAAA--GATCATTGCTTC-ACTTGGTGATTCTAATCTTTTCATAGAATTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41563526 65 + 83067054 CCTTA--TTTTGTCCTGGGGGAAA--GATCACTGTTTC-ACTCATTGATTCTAACCTCTTTATAGAATTC i micMur3.chr19 I 434 I 59 s proCoq1.NW_012148742v1 1303914 65 - 1406956 cctta--ttttGTCCTGGGGAAAA--GATCACTGTTTC-ACTCACTGACCCTAACCTCTTTATAGAGTTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11276942 67 - 20685099 CCTTA--TTTTGTCCTTGGGAGAAATAATCACTGCTTC-ACTTACTGATCCTAAACTCTTTATGGAATTC i otoGar3.GL873546 C 0 I 7 s mm10.chr1 111878723 65 + 195471971 CTTTA--TTTTATCCTAGGAAAAT--TACTGTTCTTCT-ACTTGATAATCTTAGCCTTGTCCTGGGATGA i mm10.chr1 C 0 C 0 s canFam3.chr1 112355056 67 - 122678785 CCTTATTTTTTGTACTAGACAAAA-TGATTATTGTTCC-CCTTGCTTGTCGTACTATTTT-AGAGAATTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535646 66 - 2150887 CTTTG--TTATGAAGTGGGGAAAT--GATCACTGTTTCTATTTTATGACCCTACCTTCTTTACAGAATCC i dasNov3.JH575754 C 0 C 0 a score=708111.000000 s hg38.chr18_GL383571v1_alt 182635 64 + 198278 AAAAATTCTAA-----ACTA-TATT-ATTCTGAGGGCTGCCCTTAAAATATAAAGGATA---AAAAAC--ACTGTG s panTro5.chr18 65092681 64 + 78221452 AAAAATTCTAA-----ACTA-TATT-ATTCCAAGGGCTGCCCTTAAAATATAAAGGATA---AAAAAC--ACTGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211588 64 + 77229886 AAAAATTCTAA-----ACTA-TATT-ATTCCAAGGGCTGCCCTTAAAATATAAAGGATA---AAAAAC--ACTGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431112 64 + 17472758 AAAAATTCTAA-----ACTA-TATT-ATTCCAAGGGCTGCCCTTAAAATATAAAGGATA---AAAAAC--ACTGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471668 65 - 152096393 AAAAATTCTAA-----ACTATTATT-ATTCCAAGGGCTGCCCTTAAAATAAAAAGGATA---AAATAC--ATTGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421375 64 + 70235451 AAAAATTCTGA-----ACTATTATT-ATTCCAAGGGCTCCCCTTAAAATATAAAGGATT---AAAAA---ATTGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112706 64 - 75711847 AAAAATTCTGA-----ACTATTATT-ATTCCAAGGGCTCCCCTTAAAATATAAAGGATT---AAAAA---ATTGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672032 64 - 18804593 AAAAATTCTGA-----ACTATTATT-ATTCCAAGGGCTCCCCTTAAAATATAAAGGATT---AAAAA---ATTGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283861 64 + 18905526 AAAAATTCTGA-----ACTATTATT-ATTCCAAGGGCTCCCCTTAAAATATAAAGGATT---AAAAA---ATTGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112706 65 - 72318688 AAAAATTCTGA-----ACTATTATTGATTCCAAGGGTTTCCTTTAAAATATAAAGGATT---AAAAA---ATTGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449230 64 - 1517660 AAAAATTCTGA-----ACTATTATT-ATTCCAAGGGCTCCCCTTAAAATATAAAGGATT---AAAAA---ATTGTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545062 60 + 6513552 AAAAATTCTGA-----ACTATT----ATTCCAAGGGCTTCCCTTAAAATATAAAGGATT----AAAA---ATTGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316739 67 + 117903854 AAACATTCTAA-----ACTAGTATT-ATTCCAAGGGCCACCCTTGAAATATAAGGGATT---AAACACAGATTGTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503803 67 - 31320352 AAAAATTCTAA-----ACTAGTATT-ATTCTAAGTGATGCCCTTGAAATATAAGGGATT---AAAAACAGATTGTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699560 67 + 2203405 AAAAATTCTAA-----ACTAGTATT-ATTCCAAGGGCCGCCCTTGAAATATAAGGGATT---AAAAACAGATTGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652031 67 - 14941987 AAAAATTCTAA-----ACTAGTATT-ATTCCAAGGGCCACCCTTGAAATATAAGGGTTT---AAAAACAGATTGTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1303979 67 - 1406956 AAAAATTCTAA-----ACTATTATT-ATCCCCAAGGCCACTCTTGAAATATAAAGGATA---GAAAAGAGATTATG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11277016 72 - 20685099 AAAAATTATTATTATCACTATTATT-ATCCCAATTGCTGCCCTTGAAATGCAAAAGATG---GAAAAGAAATTATA i otoGar3.GL873546 I 7 I 1 s mm10.chr1 111878788 45 + 195471971 AAAAAACC--------ACTATTATC-ATTGCAAA-----------------AAGAAGTT---ATCAAC--CTTGAG i mm10.chr1 C 0 C 0 s canFam3.chr1 112355123 68 - 122678785 CACAATTCTGA-----ACTATTATT-ATTCAAAATACAACCTTTGCAATGTAAACAATTTTGAAAAAG--ACTGTG i canFam3.chr1 C 0 I 24 s dasNov3.JH575754 535712 65 - 2150887 AAAAGCTCTAA-----ACTGCTATT-ATTCCAAACCCAGCCCTTGCCAGGTAAAGATGA---AAGAAG--ATTATG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563591 59 + 83067054 I a score=1437410.000000 s hg38.chr18_GL383571v1_alt 182699 104 + 198278 AAAAATAGAAAACTTGAGGAATAATAGC-AACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAATAC----ATATGTCATGTAAATAGCACatcac s panTro5.chr18 65092745 104 + 78221452 CAAAATAGAAAACTTGAGGAATAATAGC-AACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGAGAGAATCAATAC----ATATATCATGTAAATAGCACATCAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211652 104 + 77229886 CAAAATAGAAAACTTGAGGAATAATAGC-AACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGAGAGAATCAATAC----ATATATCATGTAAATAGCACATCAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431176 104 + 17472758 AAAAATAGAAAACTTGAGGAATAATAGC-AACAGTAAACTTTTAGCTAAGCAACTGTTAGGGATTAGGGAGAATCAATAC----ATATGTCATGTAAATAGCACATCAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471733 98 - 152096393 AAAAATAGAAAACTTGAGGAATAGTAGC-------AAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATATCATGTAAATAGCACATCAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421439 105 + 70235451 AAAAATAGAAAACTTCAGGAATAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATACCATGTAAATAGCACATCAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112770 105 - 75711847 AAAAATAGAAAACTTCAGGAATAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATACCATGTAAATAGCACATCAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672096 105 - 18804593 AAAAATAGAAAACTTCAGGAATAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATACCATGTAAATAGCACATCAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13283925 105 + 18905526 AAAAATAGAAAACTTCAGGAATAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATACCATGTAAATAGCACATCAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112771 105 - 72318688 AAAAATAGAAAACTTCAGGAGTAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCCGTAC----CTATACCATGTAAATAGCACATCAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449294 105 - 1517660 AAAAATAGAAAACTTCAGGAATAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATACCATGTAAATAGCACATCAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545122 105 + 6513552 AAAAATAGAAAACTTCAGGAATAATAGCCAACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCAGTAC----CTATACCATGTAAATAGCACATCAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316806 86 + 117903854 AAAA------------------AATAGC-AACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCGGTAC----ATACATCATCTAAATAGCACATCAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503870 86 - 31320352 AAAA------------------AATAGC-AGCAATAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCGGTAC----ATAAGTCATGTAAATAGCACATCAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699627 86 + 2203405 AGAA------------------AATAGC-AACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAAGGAGAATCGGTAC----ATACATCATGTAAATAGCACATCAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652098 86 - 14941987 AAAA------------------AATAGC-AACAGTAAACTTTTAGCTAAGCAACTATTAGGGATTAGGGAGAATCGGTAC----ATACATCATGTAAATAGCACATCAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41563650 104 + 83067054 AAAAATAGAGAACCTTAGGAATAATAGC-AGCAGTAGACATTTAGCTTAGCAATTATTAGGGATTTAGGAGAATCAGTGT----ATATGTGATACAAATAGCACATCAC i micMur3.chr19 I 59 C 0 s proCoq1.NW_012148742v1 1304046 104 - 1406956 AAAAATAGAGAACCTCAGGAATAATAGC-AGCAGTAGACATTTAGCTTAGCAATTATTAGGAATTTAGGAGAATCAGTGT----ATATGTGATACAAATAGCACATCAC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11277089 97 - 20685099 AAAGAGAGATAACCTCAGCAATAATAAC-AGCAATAGATATTTAGCTAAGCAATTTTTAGGTATTAGGGAGAATCGGGATACACATATATGATGCAAG----------- i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111878833 91 + 195471971 AAAA----------TTAGAATTGATAGC----AGTAGACTTTTAGATAGTCAGTTACTAGGGACTTGGGAGAGACAGCAT----ATGTTGAACGGCAAAAGCACAACAC i mm10.chr1 C 0 I 349 s canFam3.chr1 112355215 103 - 122678785 AAAAAAAGAAAACTTTAGGAATAACAGC-AACAGTAGGCTTTTAACTAAGCAGTTTTAAGAGATCACGAAGAATCAGTAC----ATACA-CATGTAAACATTACATCAC i canFam3.chr1 I 24 C 0 s dasNov3.JH575754 535777 103 - 2150887 AAAAATAGAGAATTTCAGGACTAATAGC-AGCAGGAGACTTTTAGCTAAGCAATTGTTAGGGATTAGGAAGAATCAGTAC----ATACATACTGTAAATCACACTCTA- i dasNov3.JH575754 C 0 C 0 a score=369349.000000 s hg38.chr18_GL383571v1_alt 182803 37 + 198278 tggggtgatcac-tggggtgaGA--GGAGCAGAAAAGGAG s panTro5.chr18 65092849 32 + 78221452 -----AGATCAC-TGGGGTGAGA--GGAGCAGAAAAGGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211756 32 + 77229886 -----AGATCAC-TGGGGTGAGA--GGAGCAGAAAAGGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431280 37 + 17472758 TGGGGTGATCAC-TAGGGTGAGA--GGAGCAGAAAAGGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471831 32 - 152096393 -----AGATCAC-TGGGGTGAGA--GGAGCAGAAAAGGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421544 32 + 70235451 -----AGATCAC-TGGGATGGTA--AGAGCAGAAAAGGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112875 32 - 75711847 -----AGATCAC-TGGGATGGTA--AGAGCAGAAAAGGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672201 32 - 18804593 -----AGATCAC-TGGGATGGTA--AGAGCAGAAAAGGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284030 32 + 18905526 -----AGATCAC-TGGGATGGTA--AGAGCAGAAAAGGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112876 32 - 72318688 -----AGATCAC-TGGGGTTAGA--AGAGCAGAAAAGGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449399 32 - 1517660 -----AGATCAC-TGGGATGGTA--AGAGCAGAAAAGGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545227 32 + 6513552 -----AGATCAC-TGGGGTGAGA--AGAGCAGAAAAGGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316892 32 + 117903854 -----AGATCAC-TGGGGTGAGA--GAAGCAGAAAAGAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503956 32 - 31320352 -----AGATCAT-TGGGGTGAGA--GAAGCAGAAAAGGAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699713 32 + 2203405 -----AGATCAC-TGGGGTGAGA--GAAGCAGAAAAGGAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652184 32 - 14941987 -----AGATGAC-TGGGGTGAGA--GAAGCAGAAAAGGAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41563754 36 + 83067054 -AGTCAGATCAT-TGGGGTATGA--GAAGCAGAAAAGGAG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1304150 36 - 1406956 -AGTGAGATCAT-TGGGGTACGA--GAAGCAGAAAAGGAG i proCoq1.NW_012148742v1 C 0 I 124 s otoGar3.GL873546 11277186 17 - 20685099 -------------TGTTGTCAGA--GAAGTGG-------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112355318 33 - 122678785 -----AGTTAGCATTCAGTAAGA--GTAGCCACAAAGGAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535880 39 - 2150887 TAGTTAGATCAC-TTGATTAAGAATGTAGCAGAACTGGAG i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I a score=151687.000000 s hg38.chr18_GL383571v1_alt 182840 10 + 198278 AAAAGGACTC s panTro5.chr18 65092881 10 + 78221452 AAAAGGACTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211788 10 + 77229886 AAAAGGACTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431317 10 + 17472758 AAAAGGACTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471863 10 - 152096393 AAAAAGACTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421576 10 + 70235451 AAAAGGACTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112907 10 - 75711847 AAAAGGACTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672233 10 - 18804593 AAAAGGACTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284062 10 + 18905526 AAAAGGACTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112908 10 - 72318688 AAAGGGACTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449431 10 - 1517660 AAAAGGACTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545259 10 + 6513552 AAAAGGACTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316924 10 + 117903854 AAAAGGACTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503988 10 - 31320352 AAAAGGATTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699745 10 + 2203405 AAAAGGACTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652216 10 - 14941987 AAAAAGACTC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41563790 10 + 83067054 AGAAGGACTC i micMur3.chr19 C 0 I 122 s otoGar3.GL873546 11277203 10 - 20685099 GGAAGGACTT i otoGar3.GL873546 C 0 I 3 s canFam3.chr1 112355351 10 - 122678785 GGAAGGACTC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535919 10 - 2150887 AGCAGGACTC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1304186 124 - 1406956 I a score=1039700.000000 s hg38.chr18_GL383571v1_alt 182850 111 + 198278 GT----GGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTCTCCTTAAGTCAAAGCAAGCATGCTGTTGGAAAAAGCCATGAACTCACTTATCATGACAT-------CTTTCATCGTT s panTro5.chr18 65092891 111 + 78221452 TT----GGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTCTCCTTAAGTCAAAGCAAGCATGCTGTTGGAAAAAGCCATGAACTCACTTATCATGACAT-------CTTTCATGGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211798 111 + 77229886 TT----GGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTCTCCTTAAGTCAAAGCAAGCATGCTGTTGGAAAAAGCCATGAACTCACTTATCATGACAT-------CTTTCATGGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431327 110 + 17472758 GT----GGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTCTCCTTAAGTCAAAGCAAGCATGCTGTTGG-AAAAGCCATGAACTCACTTATCATGACAT-------CTTTCATGGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471873 113 - 152096393 TT-AAGAGAAAGAATCTTATACCAGACCCTCTCATATCTCATCTAT-CTTAAGTCAAAGCAAGCATGCTGATGGAAAAAACCATTAACTCACTTATCATGACAT-------CTTTCATGGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421586 111 + 70235451 TTTAAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCGTGCTGATGGAAAAAACCATGAACTAACT----ATGACAT-------CTTTCATGGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63112917 111 - 75711847 TTTAAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCGTGCTGATGGAAAAAACCATGAACTAACT----ATGACAT-------CTTTCATGGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672243 111 - 18804593 TTTAAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCGTGCTGATGGAAAAAACCATGAACTAACT----ATGACAT-------CTTTCATGGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284072 111 + 18905526 TTTAAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCATGCTGATGGAAAAAACCATGAACTAAGT----ATGACAT-------CTTTCATGGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60112918 111 - 72318688 TTTAAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCGTGCTGATGGAAAAAACCATGAACTCACT----ATGACAT-------CTTTCATGGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449441 107 - 1517660 TTTAAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCGTCCTGATGGAAAAAACCATGA----ACT----ATGACAT-------CTTTCATGGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545269 111 + 6513552 TTTTAGAGAAGGAATCTTATACCAGACCCTCTCATATCTCATCTATCCTTAAGTCAAAGCAAGCGTGCTGATGGAAAAAACCATGAACTCACT----ATGACAT-------CTTTCATGGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105316934 115 + 117903854 TTTAAGAAAAGGAATCATATACCAGACCCTCTCATATCTCATCCATCCTTAAGTCAAAGCAAAAGTGCTTATGGAAAAAGCCATGAACTCACTTATAGTGACAT-------ATTTCATGGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19503998 115 - 31320352 TTTAAGAAAAGTAATCATATACCAGACCCTCTCATATTTCATCCATCTTAAAGTCAAAGCGAAAGTGCTTATGGAAAAAGCCATGAACTCACTTATAATGACAT-------ACTTCATGGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699755 115 + 2203405 TTTAAGAAAAGTAATCATATACCAGACCCTCTCATGTCTCATCCATCCTTAAGTCAAAGCAAAAGTGCTTATGGAAAAAGCCCTGAACTCACTTATAATGACAT-------ATTTCATGGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652226 115 - 14941987 TTTAAGAAAAGGAATCATATACCAGACCCTCTCATATCTCATCCATCCTTAAGTCAAAGCAAAAATGCTTATGGAAAAAGCCATGAACTCATTTATAATGACAT-------ATTTCATGGTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11277216 120 - 20685099 CCTACTAAATTGATTCTCACTCCAAATCCTCTGATCCCTCATCCATCCT--GTTTAAAGCAAGTGTGCTCAAGGGCAAAGCAATGAACTCCCACATGGTGCCATTGAGAGCCTTGCCTGGTC i otoGar3.GL873546 I 3 C 0 s canFam3.chr1 112355361 95 - 122678785 -----------------------AAACCCTTGGAAACC---AGCAGATTCAGCTTAAGGCAAGTGTGCTTCTGGACAAAGCACTGGACTC-CTCATGATGCTATGTATAGCTTTGCCCGATT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 535929 106 - 2150887 ------------AGTCCTGTTCCAGACTCT-TATTACCTTGTTCATGC--AGCTCAAGGCAAGTGCACTTATAGACATGGTACTGAG-TCACCCATAATGCTGTGTAGAGCCCTGACTGGTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41563800 122 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1304186 124 - 1406956 I a score=4299859.000000 s hg38.chr18_GL383571v1_alt 182961 304 + 198278 AATGTTATTAGGGAAAATAAAGGCA-AATCTATTATGGAAAATTGTTCCTTTATAGCGAATTGAATTATAAAGTGAGGTTATGCTAATTATTACTATATACGAAATTCCAGAATCATTGTGAAGCTGTTGAT---TTTTTTTCATAGCAGATCCAATTCTGAACAAGGCAAATCAATTTGCTG-TGTGA-GTTAAAGAAGA------------------AATTGTCATCTGATTGACACA-GCAGTGTTTATTTTTATTTTT--------------ATAATACCAGAACTACATTTTGAAAAGAGACAAA-A--AGGAAG--AGACACTGGCAATTTTGCATCCACAA s panTro5.chr18 65093002 306 + 78221452 AATGTTATTAGGGAAAATAAAGGCA-AATCTATTATGGAAAATTGTTCCTTTATAGCGAATTGAATTATAAAGTTAGGTTATGCTAATTATTACTATATATGAAATTCCAGAATCATTGTGAAGCTGGTGAT---TTTTTTAAATAGCAGATCCAATTCTGAACAAGGCAAATCAATTTGCTG-TGTGAGGTTAAAGAAGA------------------AATTGTCATCTGATTGACCCA-GCAGTGTTTATTTTTATTTTT--------------ATAATACCAGAACTACATTTTGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64211909 306 + 77229886 AATGTTATTAGGGAAAATAAAGGCA-AATCTATTATGGAAAATTGTTCCTTTATAGAGAATTGAATTATAAAGTTAGGTTATGCTAATTATTACTATATATGAAATTCCAGAATCATTGTGAAGCTGGTGAT---TTTTTTAAATAGCAGATCCAATTCTGAACAAGGCAAATCAATTTGCTG-TGTGAGGTTAAAGAAGA------------------AATTGTCATCTGATTGACCCA-GCAGTGTTTATTTTTATTTTT--------------ATAATACCAGAACTACATTTTGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431437 306 + 17472758 AATGTTATTAGGGAAAATAAAGGCA-AATCTATTATGGAAAATTGTTCCTTTATAGCGAATTGAATTATAAAGTGAGGTTATGCTAATTATTAATATATATGAAATTCCAGAATCATTGTGAAGCCGGTGAT---TTTTTTTCATAGCAGATCCATTTCTGAACAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACA-GCAGTGTTTATTTTTATTTTT--------------ATAATACCAGAACTACATTTTGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139471986 300 - 152096393 AATGTTATTAGGGAAAATAAACACA-AATCTATTATAGAAAATTGTTCCTTTATAGCAAATTGAGTTATAAAGTGAGGTTATGCTAATTATTACTAT----GAAATTCCAGAATCATTGTGAAGCTGGTGAT---TTTTTT--ATAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAAA------------------AATTGTCATCTGATTGACACA-GCAGTATTTATTTTTATTTTT--------------ATAATACCAGAACTACCTTTTGAAAAGAGACAAA-A--AGGAAGA-AGATACTGGCAATTTTGCATCCACGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57421697 309 + 70235451 AATGTTACTAGGGATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTGAATTGAATTATAAAATGAGGTTATGTTGATTATTACTATATATGAAATTCCAGAATCATTGTGAAGGTGGTGACTTTTTTTTTTTACAGCAGATCCATTTCTGAGCAAGGCAAATAAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACA-CCAGTATTTATTTTTATTTTT--------------ATCCTACCAGAACTACCTTTCGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113028 308 - 75711847 AATGTTATTAGGGATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTGAATTGAATTATAAAATGAGGTTATGTTGATTATTACTATATATGAAATTCCAGAATCATTGTGAAGGTGGTGAC-TTTTTTTTTTACAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACA-CCAGTATTTATTTTTATTTTT--------------ATCCTACCAGAACTACCTTTCGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672354 307 - 18804593 AATGTTATTAGGGATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTGAATTGAATTATAAAATGAGGTTATGTTGATTATTACTATATATGAAATTCCAGAATCATTGTGAAGGTGGTGAC--TTTTTTTTTACAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACA-CCAGTATTTATTTTTATTTTT--------------ATCCTACCAGAACTACCTTTCGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284183 307 + 18905526 AATGTTATTAGGAATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTGAATTGAATTATAAAATGAGGTTATGTTGATTATTACTATATATGAAATTCCAGAATCATTGTGAAGGTGGTGAC--TTTTTTTTTACAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACA-CCAGTATTTATTTTTATTTTT--------------ATCATATCAGAACTACCTTTTGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTACATCCACAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113029 306 - 72318688 AATGTTATTAGGGATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTGAATTGAATTATAAAATGAGGTTATGCTGATTATCACTATATATGAAATTCCAGAATCATTGCGAAGCTGGTGAC---TCTTTTTTACAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACATG-CTAGTATTTATTTTTATTTTT--------------ATCATAGCAGAACTACCTTTCGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCGATTTTCCATCCACAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449548 306 - 1517660 AATGTTATTAGGAATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTGAATTGAATTATAAAATGAGGTTATGTTGATTATTACTATATATGAAATTCCAGAATCATTGTGAAGGTGGTGAC---TTTTTTTCACAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACC-CCAGTATTTATTTTTATTTTT--------------ATCATACCAGAACTACCTTTCGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545380 305 + 6513552 AATGTTATTAGGGATAATAAAGGCA-AATCTATTATAGAAAATTGTTCCTTTGTAGTG-ATTGAATTATAAAATGAGGTTATGCTGATTATTACTATATATGAAATTCCAGAATCATTGTGAAGCTGGTGAC---TTTTTTTTACAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAGAAGA------------------AATTGTCATCTGATTGACACA-TCAGTATTTATTTTTATTTTT--------------ATCATACCAGAACTAACTTTCGAAAAGAGACAAA-A--AGGAAGA-AGACACTGGCAATTTTGCATCCACAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317049 298 + 117903854 AATGTTATTAGGGAAAATAGAGGTG-AATATGTTATAGAAAATTGTTCCTTTATAGCTAATTGAATTATAAAATGAGTTTATGCTAATTATTA-TATATATGAAATTCCAGAATCATTGTGAGGCTGGTGAT--ATTTTTTAAATAGTCGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TG-----TTAAAG---G------------------AATTGTCGTCTGATTGACACA-GCAGTATTTATTTCTATTTTT--------------ATAATACCAGAACTATCTTTTAAAAATAGACAAA-A--AGGAAGA-AGACACTGACAATTTTGCATCCATAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504113 303 - 31320352 AATGTTATTAGGGAAAATAGAGGTG-AATATATTATAGAAAATTGTACCTTTATAGCTAATTGAATTATAAAATGAGGTTATGCTAATTATTA-TATGTATGAAATTCCAGAGTCATTGTGAGGCTGGTGAT--ATTTTTTAAATAGCAGGTCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAG---G------------------AATTGTCCTCTGATTGACACA-GCAGTATTTATTTCTATTTTT--------------ATAATACCAGAACTATCTTTTGAAAATAGACAAA-A--AGGAAGA-AGACGTTGGCAAGTCTGCATCCATAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1699870 303 + 2203405 AATGTTATTAGGGAAAATGGAGGTG-AATATATTATAGAAAATTATTCCTTTATAGCTAATTGAATTATAAAATGAGGTTATGCTAATTATTA-TATATATGAAATTCCAGAATCATTGTGAGGCTGGTGAT--ATTTTTTAAATAGCAGATCCATTTCTGAGCAAGGCAAATCAATTTGCTG-TGTGAGATTAAAG---G------------------AATAGTCATCTGATTGACACA-GCAGTATTTATTTCTATTTTT--------------ATAATACCAGAACTATCTTTTGAAAATAGACAAA-A--AGGGAGA-AGACACTGACAAGTTTGCATCCATAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652341 303 - 14941987 AATGTTATTAGGGAAAATAGAGGTG-AATATATTATAGAAAATTGTTCCTTTATAGCTAATTGAATTATAAAATGAGGTTATGCGAATTATTA-TATATATGAAATTCCAGAATCATTGTGAGGCTGGTGAT--ATTTTTTAAATAGCAAATCCATTTCTGAGCAAGGGAAATCAATTTGCTG-TGTGAGATTAAAG---G------------------AATTGTCATCTGATGGACACA-GCAGTATTTATTTCTATTTTT--------------ATAATACCAGAACTATCTTTTGAAAATAGACAAA-A--AGGAAGA-AGACACTGACAATTTTGCATCCATAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41563922 322 + 83067054 AATGTTATTAGGGATAATAGAGGTG-AATCTATTGTAGAAAATTGTTCTTTTGGAGCTAATTGAATTATAAAGCAAGGCCATGCTAATTATTACTATACAGGAGATTCCAGAATCATTGTGAATCTGGTAAT--ATTTTTT--ATATTAGATCCATTTCTGAGCAAGGAAAATCAATTTGCTGAAGTGAAATTAAAGAAGGAATG--GGAAAGGAGACTAATTGTCATCTGATTTACACA-GCAATATTTATTTCTGTTTTT--------------ATAATGCCAGAACATCCTTTTGAAAGGAGAGAAA-A--GCAAAGA-AGACACTGGCAATTTTGCATCCACAA i micMur3.chr19 I 122 I 54 s proCoq1.NW_012148742v1 1304310 321 - 1406956 AATGTTATTAGGGATAATAGAGGTG-AATCTGTTGTAGAAAATTGTTCTTTTGGAGCTAATTGAATTATAAAGCAAGGCCATGCTAATTATTACTATACATGAGATTCCAGAATCATTGTGAAGCTGGTAAT--ATTTTTT--ATATCAGATCCATTTCCGAGCAAGGAAAATCAATTTGCTGAAGTGAGATTAAAGGAGGAATG--GGAAAGGAGACTAATTGACATCTGATTTACGCA-GCAGTATTTATTTCTGTTCTT--------------ATAATGCCAGAACATCCTTTTGAAAGGAGAGAAA-A--GCGAAGA-AGACACT-GCAATTTTGCATCCACAA i proCoq1.NW_012148742v1 I 124 C 0 s otoGar3.GL873546 11277336 324 - 20685099 CACGTTATCAGGGATAATAGAGGTGAAATCTATTAGAGAAAATGGTTCTTTTGGAGATAATTGAATTATAAAGCAAGGCCATGCTAATTATTACTACATAGGAGATTCCGGGTTCATTGTGAAGCTGGTAAT--ATTTTTT--ATATCAGATCCATTTCTGAGCAAGGAAAATCAATTTACCT-AGTGAGATAAAAGAAGGAACA--GGGAAGGAGACTAATTGCCGTCTGATTTGCCCA-GCACTATTTGTTTCCATTTTT--------------ATAATGCCAGGACATCCTTTTGAAAGGAAAAACA-ATGACATCAA-CGACACCAGAAATTTTATATGCACAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112355456 339 - 122678785 AATGCTGTTAGGGATAATAGAGGTG-AATCTATTATAGGAAATTGTTCTTTTGGAGCTAATTGAATTAGAAAGGGAGGTCATGCTAATTATTACGATTTATGAGATTCTAGATTCATTATGCAGATGGTAAT--ATTTTTT--ACAGCAGATCCATTTCTTAGCAAGGCATATCAATTTGCTG-AGTGAGACTGAAGAAGGAATGGAGGGGAAGAGATGAGTTGCCAACTGATTTACATATGTGCTATTCCTTTCTTTCTTTCTTTTATTTTTAAAATAATGCCAGAACAACCACTTGAAAGAAGAAAAAGA--ATGAAGA-ACATATGGGCAATTTTGCATCAACAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 536035 316 - 2150887 TATGCTATTAGGGATAATAG------AATTTATTATAACAAATTTTTCCTTTGGAGCTAATTGAATTATAAGG-GAGGTCATGTTAATTTTTGTGATTTACGAGAGTCTAGAATCATTGTGAGGCTGGTAAT--ATTTTTT--ATAGCAGATTCATTTCTGAATAAGGCATATCAGTTTGCTG-AGTGAGATTAAAGGAAA--AATGGAGAAGGAGACTAACTGTCCTCTGATTTACATG-GCAGTATTTATGCCCCTTTTT--------------ATAATGCCAGAACATCAGTTTGAAAGTTAAAAGA-A--AGTCAAACACACCCTGGCTTTTTTGCATCTAAAG i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I a score=104778.000000 s hg38.chr18_GL383571v1_alt 183265 20 + 198278 TGGCAACTTT---------------GTTTTTT-CTC s panTro5.chr18 65093308 20 + 78221452 TGGCAACTTC---------------GTTTTTT-CTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212215 20 + 77229886 TGGCAACTTT---------------GTTTTTT-CTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431743 20 + 17472758 TGGCAACTTT---------------GTTTTTT-CTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472286 18 - 152096393 TGGCAAATT-----------------TTTTTT-CTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422006 24 + 70235451 TGGCAACTTTTTT-----------TGTTTTTT-CCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113336 24 - 75711847 TGGCAACTTTTTT-----------TGTTTTTT-CCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672661 24 - 18804593 TGGCAACTTTCTT-----------TGTTTTTT-CCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284490 24 + 18905526 TGGCAACTTTTTT-----------TGTTTTTT-CCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113335 22 - 72318688 TGGAAACTTTTTT-------------TTTTTC-CTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 449854 24 - 1517660 TGGCAACTTTTTT-----------TGTTTTTT-CCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545685 22 + 6513552 TGGCAACTTTTTT-------------TTTTTT-CTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317347 20 + 117903854 TGGAAACTTT----------------TTTTTTCCCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504416 19 - 31320352 TGGAAACTTT----------------TTTTTT-CTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700173 19 + 2203405 TGGAAACTTT----------------TGTTTT-CTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652644 19 - 14941987 TGGAAACTTT----------------TTTTTT-CTC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1304631 32 - 1406956 TGTCAACTCtgtgt---gtgtgtgtgtgtTTC-CTC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11277660 32 - 20685099 TGTTAACTTTTTGT---GTGTGTGTGTGTGTG-TTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112355795 31 - 122678785 TGTTAACTTG-TGA---GTTTGGTTGTTTTGT-TTC i canFam3.chr1 C 0 I 13 s dasNov3.JH575754 536351 35 - 2150887 TGTCAACTTGTATATAGTTTTTGTTTTGTTTT-CTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564244 54 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I a score=1986219.000000 s hg38.chr18_GL383571v1_alt 183285 144 + 198278 ACCATATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTCGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTTAAAACAAAACTACGGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT s panTro5.chr18 65093328 144 + 78221452 ACCATATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTGTAGTCAGATCAGTTAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212235 144 + 77229886 ACCATATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTTAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431763 144 + 17472758 GCCATATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTGGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTTAAAACAAAACTACGGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472304 144 - 152096393 ACCAAATTGACTAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTTAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACCAGGGCAGTTGACTGAGTTGATTTAACGAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422030 144 + 70235451 ACCAAATTGACCAAACGCTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTAAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113360 144 - 75711847 ACCAAATTGACCAAACGCTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTAAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCCCAAGGGCAGTTGACTGAGTTGATTTAACGAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672685 144 - 18804593 ACCAAATTGACCAAACGCTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTAAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284514 144 + 18905526 ACCAAATTGACCAAACGTTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTAAAAACAAAACTACAGTC--TGCAAATGTCTGTTAAGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113357 144 - 72318688 ACCAAATTGACCAAACGTTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAGCTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTTAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAACGAAt i chlSab2.chr18 C 0 I 298 s manLeu1.NW_012106698v1 449878 144 - 1517660 ACCAAATTGACCAAACGTTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTAAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAAAGCAGTTGACTGAGTTGATTTAATGAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545707 144 + 6513552 ACCAAATTGACCAAACGTTTTTGC-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCAGATCAGTTAAAACAAAACTACAGTC--TGCAAATGTCTGTTAGGGT-GGCACAAGGGCAGTTGACTGAGTTGATTTAGCAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317367 143 + 117903854 ACCAAATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGAAACTGTCTACATAAC--TGTGTATTCTAGTCATATCCGTT-AAACAAAACTACAGTC--TGCTAATGTCTAATAGGGT-GGCAAGGGGAGAGCTGACTGAGTTGATTTAACAAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504435 143 - 31320352 ACCAAATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGAAGCTATCTATATAAC--TGTGTATTCTAGTCAGATGCGTT-AAACAAAACTACAGTC--TGCTAATGTCTGATAGGGT-GGCGCAAGGAGAGCTGACTGAGTTGATTTTACAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700192 141 + 2203405 ACCAAATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGTAACTATCTATATAAC--TGTGTATTCTAGTCAGATCCGTT-AAACAAAACT--AGTC--TGCTAATGTCTGATAGGGT-GGCACAAGGAGAGCTGACTGAGTTGATTTAACAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652663 134 - 14941987 ACCAAATTGACCAAATGTTTTTGT-----------------------------------------------------------------------------ATTCTAGAGAAACTATCTATATAAC--TGTGTATTCTAGTCATATCCGTT-AAACAAAACTACAGTC--TGCTAATGTCTGATAGGGT-GGCACAAGGA---------GAGGTGATTTAACAAAT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41564298 148 + 83067054 ACCATATTGACCAGACGTTTTTGT-----------------------------------------------------------------------------ATTCTGGAGAAACCATTTATATAACAGTATATATTGTATTCAGATTATTTCAAACAAAACTATAGTCTGTGCAGATGTCTGAGGGGGT-GACAAAAGGGCATTTGACTGAGCTGATTTAACCAGT i micMur3.chr19 I 54 C 0 s proCoq1.NW_012148742v1 1304663 148 - 1406956 GCCAAATTGACCAGACGTTTTTGT-----------------------------------------------------------------------------ATTCTGGAGAAACCATTTATATAACAGTATATATTCTATTCAAATCAGTTCAAACAAAACTATAGTCTGTGCAGATGTCTGAGGGGGT-GGCAAAAGGGCATTTGAATGAGTCTATTTAACCAAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11277692 152 - 20685099 ACCAAATTGACAAGACGCTTTTTT-----------------------------------------------------------------------CTTTTCATTCTAGAGCTACTGTCTATATAACAGTGTATATTCTAGTCAGATCAGTTCAAACAAAACTAT-GCCTGTGCAGATGTTTGATGCGGA-GGCAAAAGGGCATTTAAAC-AGTTGACTTAACCAAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112355839 223 - 122678785 ACCAAACTGACCAGATGTTTTTGTTTTAgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgGTTttttgttttgttttgttttgttttgttttTTGTATTCTAGAGAAATTGTCTATATAGCAATTTGTATTCTAGTCAGATCAGTTCAAAC-AAACTACAGTCCATGCAGAGGTCTGAAGTGGT-GGTAAGAAAACAG-TGGCTGAGTTAATTTAACAAAT i canFam3.chr1 I 13 C 0 s dasNov3.JH575754 536386 138 - 2150887 ACCAAAATG----GATGTTTTTGT-----------------------------------------------------------------------------ATTATTAAGAAACTGTCCATATAGCAATACATATTCTAGTCTGATCAGTTCAAACAAAACTACAGTCCATGCAGGTATCTGATGTGGTAGGGAATAGGACAATTGAGTGAATTGATAT------- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I a score=13845.000000 s hg38.chr18_GL383571v1_alt 183429 2 + 198278 AC s panTro5.chr18 65093472 2 + 78221452 AC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212379 2 + 77229886 AC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431907 2 + 17472758 AC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472448 2 - 152096393 AT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422174 1 + 70235451 -T i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63113504 1 - 75711847 -T i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13672829 1 - 18804593 -T i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13284658 1 + 18905526 -T i cerAty1.NW_012001075v1 C 0 I 1 s manLeu1.NW_012106698v1 450022 1 - 1517660 -T i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3545851 2 + 6513552 TT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317510 2 + 117903854 AT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504578 2 - 31320352 AT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700333 2 + 2203405 AT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652797 2 - 14941987 AT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41564446 2 + 83067054 AT i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1304811 2 - 1406956 AT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11277844 2 - 20685099 AT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356062 2 - 122678785 AT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 536524 2 - 2150887 AT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I e chlSab2.chr18 60113501 298 - 72318688 I a score=636166.000000 s hg38.chr18_GL383571v1_alt 183431 45 + 198278 TTATTACAGGCCTAAGATGCTCTAAACAGCATTGTAAATTTGTTA s panTro5.chr18 65093474 45 + 78221452 TTATTACAGGCCTAAGATGCTCTAAACAGCATTGTAAATTTGTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212381 45 + 77229886 TTATTACAGGCCTAAGATGCTCTAAACAGCATTGTAAATTTGTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431909 41 + 17472758 TTATTACAGGCCTAAGATGCTC----CAGCATTGTAAATTTGTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472450 45 - 152096393 TTATTACAGGCCTAAGATGCTCTAAACAGCATTGTAAATTTGTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422176 45 + 70235451 TTATTATAGGCCTAAGAGGCTCTAAATAACATTGTAAATTTGTTA i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63113506 45 - 75711847 TTATTATAGGCCTAAGATGCTCTAAATAACATTGTAAATTTGTTA i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13672831 45 - 18804593 TTATTATAGGCCTAAGATGCTCTAAATAACATTGTAAATTTGTTA i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13284660 45 + 18905526 TTATTACAGGCCTAAGATGCTCTAAATAACATTGTAAATTTGTTA i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60113799 45 - 72318688 TTATTATAGGCCTAAGATGCTCTAAATAACATTGTAAATTTGTTA i chlSab2.chr18 I 298 C 0 s manLeu1.NW_012106698v1 450024 45 - 1517660 TTATTATAGGCCTAAGATGCTCTAAATAACATTGTAAATTTGTTA i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3545853 45 + 6513552 TTATTATAGGCCTAAGATGCTCTAAATAACATTGTAAATTTGTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317512 45 + 117903854 TTATTGCAGGCTTTAGATGCCCCATACAGCATTGTAAATTTGTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504580 45 - 31320352 TTATTGCAGGCTTTAGATGCTCCATACAGCATTGTAAGTTTGTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700335 45 + 2203405 TTACTGCAGGCTTTAGATGCTCCATACAGCACTGTAAATTTGTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652799 45 - 14941987 TTATTGCAGGCTTTAGATGCTCCATACAGCACTGTAAATTTGTTA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41564448 45 + 83067054 TTATTGCATGGCTAAGCTGTTCCCAATAACATTGTAAATTTGTTA i micMur3.chr19 C 0 I 222 s proCoq1.NW_012148742v1 1304813 45 - 1406956 TTATTGCAAGGCTAAGATGTTCCCAATAACATTGTAAATTTGTTA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11277846 45 - 20685099 TTACTGCATGGCTAGGACGTTCCAAACAACATTGTAAATTTGTGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356064 45 - 122678785 TTATTGCTTGGCTAAGATGTTGCAAACAATGTGGTAAATTTGTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 536526 45 - 2150887 TTATTGCACAGTTAAGATGTTACAGGCAGAATGCTAGATTTGTTA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I a score=102733.000000 s hg38.chr18_GL383571v1_alt 183476 7 + 198278 TTAATAG s panTro5.chr18 65093519 7 + 78221452 TTAATAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212426 7 + 77229886 TTAATAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431950 7 + 17472758 TTAATAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472495 7 - 152096393 TTAATAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422221 7 + 70235451 TTAATAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113551 7 - 75711847 TTAATAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672876 7 - 18804593 TTAATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284705 7 + 18905526 TTAATAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113844 7 - 72318688 TTAATAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450069 7 - 1517660 TTAATAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545898 7 + 6513552 TTAATAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317557 7 + 117903854 TTAATAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504625 7 - 31320352 TGAATAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700380 7 + 2203405 TTAATAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652844 7 - 14941987 TTAATAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1304858 7 - 1406956 CTAATAG i proCoq1.NW_012148742v1 C 0 I 156 s otoGar3.GL873546 11277891 7 - 20685099 CTAATAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356109 7 - 122678785 TCAATAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 536571 7 - 2150887 GCAAGAG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564493 222 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I a score=887682.000000 s hg38.chr18_GL383571v1_alt 183483 97 + 198278 A-------TTTAGAGGCAAGA-TTTGCAAAATGAGTAAGTCCTTGAAAGGTTACTGTCCTTGAAAAAGTCACAAT-------------------CTATTGAGGAAAG--AG--------A----------AATAATTACAATAT s panTro5.chr18 65093526 98 + 78221452 A-------TTTAGAGGCAAGATTTTGCAAAATGAGTAAGTCCTTGAAAGGTTACTGTCCTTGAAAAAGTCACAAT-------------------CTATTGAGGAAAG--AG--------A----------AATAATTACAATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212433 98 + 77229886 A-------TTTAGAGGCAAGATTTTGCAAAATGAGTAAGTCCTTGAAAGGTTACTGTCCTTGAAAAAGTCACAAT-------------------CTATTGAGGAAAG--AG--------A----------AATAATTACAATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5431957 98 + 17472758 A-------TTTAGAGGCAAGATTTTGCAAAATGAGTAAGTCCTTGAAAGGTTACTGTCCTTGAAAAAGTCACAAT-------------------CTATTGAGGAAAG--AG--------A----------AATAATTACAATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472502 100 - 152096393 A-------TTTAGAGGCAAGATTTTGCaaaatgagtaagtccttgaaaggttactgtccttaaaaaagtcacaat-------------------ctattgaagaaagatag--------a----------aataattacaataT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422228 95 + 70235451 A-------TTTAGAGGCAAGATTTTGCaaaatgagtaagtc-----atggttactgtccttgaaaaagtcactat-------------------ctattgaggaaagatag--------a----------aataattgcaatat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113558 95 - 75711847 A-------TTTAGAGGCAAGATTTTGCAAAATGAGTAAGTC-----ATGGTTACTGTCCTTGAAAAAGTCACTAT-------------------CTATTGAGGAAAGATAG--------A----------AATAATTGCAATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672883 95 - 18804593 A-------TTTAGAGGCAAGATTTTGCaaaatgagtaagtc-----atggttactgtccttgaaaaagtcactat-------------------ctattgaggaaagatag--------a----------aataattgcaatat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284712 95 + 18905526 A-------TTTAGAGGCAAGATTTTGCaaaatgagtcagtc-----atggttactgtccttgaaaaagtcactat-------------------ctattgaggaaagatag--------a----------aataattacaatat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113851 95 - 72318688 A-------TTTAGAGGCAAGATTTTGCaaaatgagtaagtc-----atggttacagtccttgaaaaagtcactat-------------------ctattgaggaaagacag--------a----------aataattacaatat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450076 95 - 1517660 A-------TTTAGAGGCAAGATTTTGCaaaatgagtaagtc-----acggttactgtccttgaaaaagtcactat-------------------ctattgaggaaagatag--------a----------aataattacaatat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545905 94 + 6513552 A-------TTTAGAGGCAAGATTTTGCaaaatgagtaagtc-----acggttactgtccttgaaaaagttactat-------------------cta-tgaggaaagatag--------a----------aataattacaacat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317564 92 + 117903854 AGGAGA---------GAGAGATTTTGC-aaataagtaagtc-----acagttgctgtccttgaaaaagtcacaat-------------------ctattgagcagagatag--------a----------aataattacaataT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504632 88 - 31320352 AG-------------GAGAGATTTTGC-aaataagtaagtc-----atggttgctgtcgttgaaaaagtcacaat-------------------ctattgagcaaagatag--------a----------aataattacaatat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700387 120 + 2203405 AGGAGAGATTTAGAGGAGAGATTTTGC-AAATAAGTATGTC-----ATGGTTGCTGTCCTTGAAAAAGTTACAATATAAAATAGATAGAAATAATTACAATAAAAAGATAG--------A----------AATAATTACAATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652851 101 - 14941987 AGGAGAGATTTAGAGGAGAGATTTTGC-aaataagtaagtc-----atggttgctgtccttgaaaaagtcacaat-------------------ctattgagcaaagatag--------a----------aataattacaatat i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11277898 100 - 20685099 -------AGTTAGCACAGagatgccggaaaatgagtaagtc-----atggttactgtccttgaggaagtcacagt-------------------tggttgag-aaagatagatgta--ta----------aataattaccatat i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356116 97 - 122678785 -------AATTAGACA------TTCCCAAAATGTGTAAGTC-----ATGGTTACGGTTTTTGAAAAAGATACAGC-------------------TTACTCAAGAAAAATAAATATAATCA----------AATAAATACAGTAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 536578 98 - 2150887 -------AGTTAGAGCAGAGATTCTCAAAGATTATTA--TC-----ATCATTAC-----TTGAAAAATTCACAGT-------------------TTAGCAATGAAATACAG--------AAAtaaaaaggaataattataacat i dasNov3.JH575754 C 0 I 2003 e micMur3.chr19 41564493 222 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1304865 156 - 1406956 I a score=537672.000000 s hg38.chr18_GL383571v1_alt 183580 50 + 198278 GTGGCAATGGTGTTATGTTAGAAAGCTAGGACTTGAAGTGTTGAGTTAAT s panTro5.chr18 65093624 50 + 78221452 GTGGCAATGGTGTTATGTTAGAAAGCTAGGACATGAAGTGTTGAGTTAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212531 50 + 77229886 GTGGCAATGGTGTTATGTTAGAAAGCTAGGACATGAAGTGTTGAGTTAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432055 50 + 17472758 GTGGCAATGGTGTTATGTTAGAAAGCTAGGACTTGAAGTGTTGAGTTAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472602 45 - 152096393 GTGGCAACGG-----TGTTAGAAAGCTCGGACTTGAAGTGTTGAGTTAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422323 50 + 70235451 gtggcaatggtgttatgttagaaagctagaACTTGAAGTGTTGAGTTAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113653 50 - 75711847 GTGGCAATGGTGTTATGTTAGAAAGCTAGAACTTGAAGTGTTGAGTTAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13672978 50 - 18804593 gtggcaatggtgttatgttagaaagctagaACTTGAAGTGTTGAGTTAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284807 50 + 18905526 gtggcaatggtgttatgttagaaagctagaACTTGAAGTGTTGAGTTAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113946 50 - 72318688 gtggcaatggtgttatgttagaaagctagaACTTGAAGTGTTGAGTTAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450171 50 - 1517660 gtggcaatggtaTTATGTTAGAAAGCTAGAACTTGAAGTGTTGAGTTAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3545999 50 + 6513552 gtggcaatggtgttatgttagaaagctagaACTTGAAGTGTTGAGTTAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317656 50 + 117903854 GTGGCAATAACATTTTGTTAAAAAGCTAGGACTTGAAGTGTTGAGTTAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504720 50 - 31320352 atggcaataacaTTATGTTAAAAAGCTGGGACTTGAAGTGTTGAGTTAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700507 50 + 2203405 GTGGCAATAACATTATATTAAAAAGCTCGGACTTGAAGTGTTGAATTAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3652952 50 - 14941987 gtggcaatAACATTATGTTAAAAAGCTAGAACTTGAAGTGTTGAGTTAAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11277998 48 - 20685099 atgtt-aCATTGTTATGTTAAAAATCTA-AACCAAAAGTGATGAGTTAAC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356213 48 - 122678785 GTGGAAATAGTGTC-TGTTACCAAGCTAG-ACCCAAAGTACTGAGCTAAC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564493 222 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1304865 156 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=587829.000000 s hg38.chr18_GL383571v1_alt 183630 49 + 198278 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------GCATGAGTAAGGAT--- s panTro5.chr18 65093674 49 + 78221452 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------GCATGAGTAAGGAT--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212581 49 + 77229886 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------GCATGAGTAAGGAT--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432105 49 + 17472758 CGTTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------GCATAAGTAAGGAT--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472647 71 - 152096393 CATTGTGTTCAGGGACTGAATATAGGTATTATTGTACTGTTTAGGGACTGAATATAGGTATTATTAAGGAT--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422373 49 + 70235451 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113703 49 - 75711847 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673028 49 - 18804593 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284857 49 + 18905526 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60113996 49 - 72318688 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450221 49 - 1517660 CATTGTGTTTAGGGACTGAGTATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546049 49 + 6513552 CATTGTGTTTAGGGACTGAATATAGGTATTATTGT----------------------ACATGTGTAAGGAT--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317706 49 + 117903854 CATTGTGTTTAGGGACTGAATATAGATATTATTGT----------------------ACATTAGTAAGGAT--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504770 49 - 31320352 CATTGTGTTTAGGGGCTGAATATAGATATTATTGT----------------------ACGTGAATAAAGAT--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700557 49 + 2203405 CATTGTGTTTAGGGACTGAATATAGATATTATTGT----------------------ACATGAGTAAggat--- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3653002 49 - 14941987 CATTGTGTTTAGGGACTGAATATAGATATTATTGT----------------------ACATGAGTAAggat--- i aotNan1.NW_018502140v1 C 0 I 166 s proCoq1.NW_012148742v1 1305021 46 - 1406956 CATTGTGTTTTGGGACTGAATATAGGTATTTT-------------------------ACATGAGTAAGGAC--- i proCoq1.NW_012148742v1 I 156 C 0 s otoGar3.GL873546 11278046 46 - 20685099 CTTTGTGTTCGGGGAGTAGATATAGGTATTAT-------------------------ACCTGAGTAAGGAT--- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356261 43 - 122678785 CATTATGCTTTGGGATTGAATA---------TTAT----------------------ACATGAAAAAGAAGGAG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564493 222 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=91099.000000 s hg38.chr18_GL383571v1_alt 183679 11 + 198278 ACAAAG--ATAGT s panTro5.chr18 65093723 11 + 78221452 ACAAAG--ATAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212630 11 + 77229886 ACAAAG--ATAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432154 11 + 17472758 ACAAAG--ATAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472718 11 - 152096393 ACAAAG--ATAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422422 11 + 70235451 ACAAAG--ATAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113752 11 - 75711847 ACAAAG--ATAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673077 11 - 18804593 ACAAAG--ATAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284906 11 + 18905526 ACAAAG--ATAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114045 11 - 72318688 ACAAAG--ATAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450270 11 - 1517660 ACAAAG--ATAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546098 11 + 6513552 ACAAAG--ATAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317755 11 + 117903854 TGAAAG--Acagc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504819 11 - 31320352 CGAAAG--AGagc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700606 11 + 2203405 tgaaag--acagt i cebCap1.NW_016107689v1 C 0 C 0 s proCoq1.NW_012148742v1 1305067 9 - 1406956 --AAAA--GAAGC i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11278092 11 - 20685099 --AAAAATGAAAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356304 11 - 122678785 GCAAAG--GCAGT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564493 222 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e aotNan1.NW_018502140v1 3653051 166 - 14941987 I a score=34738.000000 s hg38.chr18_GL383571v1_alt 183690 3 + 198278 AAA- s panTro5.chr18 65093734 3 + 78221452 AAA- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212641 3 + 77229886 AAA- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432165 3 + 17472758 AAA- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472729 3 - 152096393 AAA- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422433 3 + 70235451 AAA- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113763 3 - 75711847 AAA- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673088 3 - 18804593 AAA- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284917 3 + 18905526 AAA- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114056 3 - 72318688 AAA- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450281 3 - 1517660 AAA- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546109 3 + 6513552 AAA- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317766 3 + 117903854 aaa- i calJac3.chr13 C 0 I 11 s saiBol1.JH378121 19504830 3 - 31320352 aaa- i saiBol1.JH378121 C 0 I 70 s cebCap1.NW_016107689v1 1700617 3 + 2203405 aaa- i cebCap1.NW_016107689v1 C 0 I 157 s micMur3.chr19 41564715 3 + 83067054 AAA- i micMur3.chr19 I 222 C 0 s proCoq1.NW_012148742v1 1305076 3 - 1406956 AAA- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11278103 2 - 20685099 -AA- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356315 3 - 122678785 -AAT i canFam3.chr1 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e aotNan1.NW_018502140v1 3653051 166 - 14941987 I a score=323326.000000 s hg38.chr18_GL383571v1_alt 183693 38 + 198278 TGCAAACACTGAAATTAGTAGTCACTTTTCTTCATTTA s panTro5.chr18 65093737 38 + 78221452 TGCAAACACTGAAATTAGTAGTAACTTTTCTTCATTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212644 38 + 77229886 TGCAAACACTGAAATTAGTAGTAACTTTTCTTCATTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432168 38 + 17472758 TGCAAACACTGAAATTAGTAGTAACTTTTCTTCATTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472732 38 - 152096393 TGCAAACACTGAAATTGGTAGTAACTTTTCTTCATTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422436 38 + 70235451 TGCAAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113766 38 - 75711847 TGCAAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673091 38 - 18804593 TGCAAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284920 38 + 18905526 TGCAAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114059 38 - 72318688 TGCGAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450284 38 - 1517660 TGCAAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546112 38 + 6513552 TGCAAACACTGAAATTAGTAGTAACTTTTCTGCATTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317780 34 + 117903854 tgtatgtaccta----tggaacaatccttttgcacatg i calJac3.chr13 I 11 I 12 s micMur3.chr19 41564718 35 + 83067054 TGCAAACACTGAAAT---TAGTAGATCTTCTACATTTA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1305079 38 - 1406956 TGGAAACACTGAAATTAGTAGTAGTGCTTCTGAATTTA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11278105 38 - 20685099 TGCAAACACTGAAATTAGTAGCAGCTCTTCTGCATTCA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356318 34 - 122678785 TCCAAACAC----ATTAGGAGCAGCTTTGCAGCATTTA i canFam3.chr1 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e aotNan1.NW_018502140v1 3653051 166 - 14941987 I e cebCap1.NW_016107689v1 1700620 157 + 2203405 I e saiBol1.JH378121 19504833 70 - 31320352 I a score=444164.000000 s hg38.chr18_GL383571v1_alt 183731 50 + 198278 ----CAAGATA---------------CGA-------ACAGATAACATCTATAATTTCTGCTAG-AGAAATTTAAGTA s panTro5.chr18 65093775 50 + 78221452 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGCTAG-AGAAATTTAAGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212682 50 + 77229886 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGCTAG-AGAAATTTAAGTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432206 50 + 17472758 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGCTAG-AGAAATTTAAGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472770 50 - 152096393 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGCTAG-AGAAATTTAAGTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422474 50 + 70235451 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGTTAG-AGAAAATTAAGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113804 50 - 75711847 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGTTAG-AGAAAATTAAGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673129 50 - 18804593 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGTTAG-AGAAAATTAAGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13284958 50 + 18905526 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGTTAG-AGAAAATTAAGTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114097 50 - 72318688 ----CAAGATA---------------TGA-------ACAGATAACATCTATAATTGCTGCTAG-AGAAAATTAAGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450322 50 - 1517660 ----CAAGATA---------------TGA-------ACAGATAACATTTATAATTGCTGTTAG-AGAAAATTAAGTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546150 50 + 6513552 ----CAAGATA---------------TGA-------ACAGACAACATCTATAATTGCTGCTAG-AGAAAATTAAGTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317826 51 + 117903854 ----caaagta-----------CGACTGA-------AAAAATAAAGTCAGTAAATGTTTGTTG-ATAAA---AGGTG i calJac3.chr13 I 12 C 0 s saiBol1.JH378121 19504903 52 - 31320352 ----caaagta-----------caactga-------aaaaataaaGTCAGTAAATGTTTGTTGAATAAA---AGGTG i saiBol1.JH378121 I 70 C 0 s micMur3.chr19 41564753 50 + 83067054 ----TAAGATA---------------TGA-------ACAGATAATATCTATAATTGCTGACAA-AGAAATTCAAGTA i micMur3.chr19 C 0 I 337 s proCoq1.NW_012148742v1 1305117 50 - 1406956 ----TAAGATA---------------TGA-------ACAGATAATATCTATAATTGCTGACAA-GGAAATTCAAGTA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11278143 49 - 20685099 ----TAAGATA---------------TGA-------ACAGATAATAT-TGTAATTGTTGGCAA-AACAATTCAAGTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356352 76 - 122678785 TAAGCACAATAATACGGTTTACCAAATGACAAGTTCATGGATAAAATCTGTAATTGCTGCCAG-AGAATTTAAAAAA i canFam3.chr1 C 0 C 0 e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e aotNan1.NW_018502140v1 3653051 166 - 14941987 I e cebCap1.NW_016107689v1 1700620 157 + 2203405 I a score=28251.000000 s hg38.chr18_GL383571v1_alt 183781 5 + 198278 --ACACA------------------ s panTro5.chr18 65093825 5 + 78221452 --ACACA------------------ i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212732 5 + 77229886 --ACACA------------------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432256 5 + 17472758 --ACACA------------------ i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472820 5 - 152096393 --ACACA------------------ i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422524 5 + 70235451 --ACACA------------------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113854 5 - 75711847 --ACACA------------------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673179 5 - 18804593 --ACACA------------------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285008 5 + 18905526 --ACACA------------------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114147 5 - 72318688 --ATACA------------------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450372 5 - 1517660 --ACACA------------------ i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546200 5 + 6513552 --ACACA------------------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317877 5 + 117903854 --AATTA------------------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19504955 5 - 31320352 --AATCA------------------ i saiBol1.JH378121 C 0 C 0 s proCoq1.NW_012148742v1 1305167 5 - 1406956 --ACACA------------------ i proCoq1.NW_012148742v1 C 0 I 56 s otoGar3.GL873546 11278192 5 - 20685099 --CCACA------------------ i otoGar3.GL873546 C 0 I 18 s canFam3.chr1 112356428 25 - 122678785 AAACACAGCCCTAAATTGAAAATCA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e aotNan1.NW_018502140v1 3653051 166 - 14941987 I e cebCap1.NW_016107689v1 1700620 157 + 2203405 I a score=88178.000000 s hg38.chr18_GL383571v1_alt 183786 11 + 198278 TTCTTAAGGAC s panTro5.chr18 65093830 11 + 78221452 TTCTTAAGGAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212737 11 + 77229886 TTCTTAAGGAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432261 11 + 17472758 TTCTTAAGGAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472825 11 - 152096393 TTCTTAAGGAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422529 11 + 70235451 TTCTTCAGGAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113859 11 - 75711847 TTCTTCAGGAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673184 11 - 18804593 TTCTTCAGGAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285013 11 + 18905526 TTCTTCAGGAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114152 11 - 72318688 TTCTTCAGGAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450377 11 - 1517660 TTCTTCAGGAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546205 11 + 6513552 TTCTTAAGGGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317882 11 + 117903854 TTCTTGAAAAA i calJac3.chr13 C 0 I 5 s saiBol1.JH378121 19504960 11 - 31320352 TTCTTaaaaaa i saiBol1.JH378121 C 0 I 5 s otoGar3.GL873546 11278215 11 - 20685099 TTCTTAAGGTC i otoGar3.GL873546 I 18 C 0 s canFam3.chr1 112356453 11 - 122678785 TACTTAAGAAC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305172 56 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e aotNan1.NW_018502140v1 3653051 166 - 14941987 I e cebCap1.NW_016107689v1 1700620 157 + 2203405 I a score=65900.000000 s hg38.chr18_GL383571v1_alt 183797 8 + 198278 AG-----------------------------AATGTG s panTro5.chr18 65093841 8 + 78221452 AG-----------------------------AATGTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212748 8 + 77229886 AG-----------------------------AATGTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432272 8 + 17472758 AG-----------------------------AATGTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472836 8 - 152096393 AG-----------------------------AATGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422540 8 + 70235451 AG-----------------------------AATGTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113870 8 - 75711847 AG-----------------------------AATGTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673195 8 - 18804593 AG-----------------------------AATGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285024 8 + 18905526 AG-----------------------------AATGTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114163 8 - 72318688 AG-----------------------------AATGTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450388 8 - 1517660 AG-----------------------------AATGTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546216 8 + 6513552 AG-----------------------------AATGTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317898 8 + 117903854 AG-----------------------------AAAGTG i calJac3.chr13 I 5 C 0 s saiBol1.JH378121 19504976 37 - 31320352 aaaaaaaaaaaaaaaaaaaaaaaaaaGGAACAAAGTG i saiBol1.JH378121 I 5 C 0 s aotNan1.NW_018502140v1 3653217 8 - 14941987 ag-----------------------------aaagtg i aotNan1.NW_018502140v1 I 166 C 0 s otoGar3.GL873546 11278226 8 - 20685099 AG-----------------------------AATGTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356464 8 - 122678785 AG-----------------------------ACTATG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305172 56 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e cebCap1.NW_016107689v1 1700620 157 + 2203405 I a score=257056.000000 s hg38.chr18_GL383571v1_alt 183805 22 + 198278 AGTTAGCTAAAGTAATGTATCG s panTro5.chr18 65093849 22 + 78221452 AGTTAGCCAAAGTAATGTATCG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212756 22 + 77229886 AGTTAGCCAAAGTAATGTATCG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432280 22 + 17472758 AGTTAACCAAAGTAATGTATCG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472844 22 - 152096393 AGTTAGCCAAAGTAATGTATAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422548 22 + 70235451 AGTTAGCCAAAGTAATGTACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113878 22 - 75711847 AGTTAGCCAAAGTAATGTATAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673203 22 - 18804593 AGTTAGCCAAAGTAATGTATAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285032 22 + 18905526 AGTTAGCCAAAGTAATGTATAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114171 22 - 72318688 AGTTAGCCAAAGTAATCTATAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450396 22 - 1517660 AGTTAGCCAAAGTAATGTATAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546224 22 + 6513552 AGTTAGCCAAAGTAATCTATAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317906 22 + 117903854 AGTTAGCCAAAGAAATGTATAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505013 22 - 31320352 AGTTAGCCAAAGAAATGTATAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700777 22 + 2203405 agttagccaaagaaatgtatag i cebCap1.NW_016107689v1 I 157 C 0 s aotNan1.NW_018502140v1 3653225 22 - 14941987 agttagccaaagaaatgtatag i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11278234 22 - 20685099 GTTTGACCAAAGGAATGTATAA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356472 22 - 122678785 GGTCAGCCAAAGAAATATATAG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305172 56 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=934913.000000 s hg38.chr18_GL383571v1_alt 183827 71 + 198278 ATAAAAGGAAGAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA s panTro5.chr18 65093871 71 + 78221452 ATAAAAGGAAGAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212778 71 + 77229886 ATAAAAGGAAGAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432302 71 + 17472758 ATAAAAGGAAGAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472866 71 - 152096393 ATAAAAGGAAAAAAATGATC-AAAAATTATTATTTTGGGAACGAAAGCAGTTGACTAAGCATGACTTATTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422570 71 + 70235451 ATAAAAGGAAAAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113900 71 - 75711847 ATAAAAGGAAAAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673225 71 - 18804593 ATAAAAGGAAAAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285054 71 + 18905526 ATAAAAGGAAAAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114193 72 - 72318688 ATAAAAGGAAAAAAATGATCAAAAAATTATTATTTTGGGACAGAAAGCAGTTGACAAAGCACGATTTATTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450418 71 - 1517660 ATAAAAGGAAAAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546246 70 + 6513552 ATAAAAGG-AAAAAATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105317928 63 + 117903854 --------AAAAAAAAGATA-AAAAATTATTATTTTGGGACAGAAAGGAGTTGACTAAGCATGATTTATTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505035 71 - 31320352 ATAAAAGAAAAAAAAAGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAGGCATGATTTATTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700799 70 + 2203405 ataaaag-aaaaaaaTGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3653247 71 - 14941987 ataaaagaaaaaaaATGATC-AAAAATTATTATTTTGGGACAGAAAGCAGTTGACTAAGCATGATTTATTCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1305228 70 - 1406956 ATAAAAG-GAAAAAATGATA-AAAAATTATTATTTTAGGGCAGAAAGAAGTTGACTAAGCATGatttattca i proCoq1.NW_012148742v1 I 56 I 257 s otoGar3.GL873546 11278256 70 - 20685099 ATAACAG-AGAGAAGTGATC-AAAAGTTATTATTTTGTGGCAGAAAGAAGTTGACTAAGCCTGATTTATTCT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356494 67 - 122678785 ATAAAGG--AAAAAATAATG-AAAAAGTATTATTTTGGAACAGAAAGAAATTGAAGAAGCATGAC--ATTAA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=97142.000000 s hg38.chr18_GL383571v1_alt 183898 8 + 198278 CTAATTCA s panTro5.chr18 65093942 8 + 78221452 CTAATTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212849 8 + 77229886 CTAATTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432373 8 + 17472758 CTAATTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139472937 8 - 152096393 CTAATTCA i nomLeu3.chr4 C 0 I 443 s rheMac8.chr18 57422641 8 + 70235451 CTAATTCA i rheMac8.chr18 C 0 I 1 s macFas5.chr18 63113971 8 - 75711847 CTAATTCA i macFas5.chr18 C 0 I 1 s macNem1.NW_012016688v1 13673296 8 - 18804593 CTAATTCA i macNem1.NW_012016688v1 C 0 I 1 s cerAty1.NW_012001075v1 13285125 8 + 18905526 CTAATTCA i cerAty1.NW_012001075v1 C 0 I 1 s chlSab2.chr18 60114265 8 - 72318688 CTAACTCA i chlSab2.chr18 C 0 I 1 s manLeu1.NW_012106698v1 450489 8 - 1517660 CTAATTCA i manLeu1.NW_012106698v1 C 0 I 1 s colAng1.NW_012115433v1 3546316 8 + 6513552 CTAACTCA i colAng1.NW_012115433v1 C 0 I 1 s calJac3.chr13 105317991 8 + 117903854 CTAATTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505106 8 - 31320352 CTAATTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700869 8 + 2203405 CTAATTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3653318 8 - 14941987 CTAATTCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11278326 8 - 20685099 CTCATTTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356561 8 - 122678785 CTTATTTG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=12376.000000 s hg38.chr18_GL383571v1_alt 183906 1 + 198278 T s panTro5.chr18 65093950 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212857 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432381 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s rheMac8.chr18 57422650 1 + 70235451 T i rheMac8.chr18 I 1 C 0 s macFas5.chr18 63113980 1 - 75711847 T i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13673305 1 - 18804593 T i macNem1.NW_012016688v1 I 1 C 0 s cerAty1.NW_012001075v1 13285134 1 + 18905526 T i cerAty1.NW_012001075v1 I 1 C 0 s chlSab2.chr18 60114274 1 - 72318688 T i chlSab2.chr18 I 1 C 0 s manLeu1.NW_012106698v1 450498 1 - 1517660 T i manLeu1.NW_012106698v1 I 1 C 0 s colAng1.NW_012115433v1 3546325 1 + 6513552 T i colAng1.NW_012115433v1 I 1 C 0 s calJac3.chr13 105317999 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505114 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700877 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3653326 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11278334 1 - 20685099 T i otoGar3.GL873546 C 0 I 7 s canFam3.chr1 112356569 1 - 122678785 T i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e nomLeu3.chr4 139472945 443 - 152096393 I a score=802182.000000 s hg38.chr18_GL383571v1_alt 183907 70 + 198278 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC s panTro5.chr18 65093951 70 + 78221452 ---TTTTTCATTC--------TTGAA-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212858 70 + 77229886 ---TTTTTCATTC--------TTGAA-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432382 70 + 17472758 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCGAAGTGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473388 70 - 152096393 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTTTAAGTGC i nomLeu3.chr4 I 443 C 0 s rheMac8.chr18 57422651 70 + 70235451 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTTTAAGTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63113981 70 - 75711847 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673306 70 - 18804593 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285135 70 + 18905526 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114275 70 - 72318688 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGACCAGGTAAGTAAATGTTCTAAGTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450499 70 - 1517660 ---TTTTTCATTC--------TTGAT-AAACCTCTTTAGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTAAGTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546326 70 + 6513552 ---TTTTTCATTC--------TTGGT-AAACCTCTTTTGAGACTT----CACTTCCAGGGGCCAGATAAGTAAATGTTCTGAGTGC i colAng1.NW_012115433v1 C 0 I 121 s calJac3.chr13 105318000 71 + 117903854 ---TTTTTCATTC--------TTGATAAAACCTTTTCAGAGACTT----CATTTCCAGTGGCCAGATAAGTAAATGGACTAAGTGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505115 70 - 31320352 ---TTTTTCATTC--------TTGAT-AAACCTTTTTAGAGACTT----CACTTCCAGTGGCCAGATAAGTAAATGGTCTAAGTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700878 70 + 2203405 ---TTTTTCATTC--------TTGAT-AAACCTTTTTAGAGACTT----CACTTCCAGTGGCCAGATAAGAAAATGATCTAAGTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3653327 70 - 14941987 ---TTTTTCATTC--------TTGAT-AAACCTTTTTAGAGACTT----CATTTCCAGTAGCCAGATAAGTAAATGGTCTAAGTGC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11278342 77 - 20685099 ---TTTTTCGTTCATTTCCTGTTAAT-AAA-CTACTTAGGGATGT----CACTTCCAGGGGTGAGATAGTTAAATACCCTAACTGA i otoGar3.GL873546 I 7 C 0 s canFam3.chr1 112356570 85 - 122678785 TCTTTTATCATTCATTTAATGTTGAT-AAAGTACTTTACAGAACTTACATACTTACAGGGGTCAAATAATTAAGTGTTCTAAATGA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=49563.000000 s hg38.chr18_GL383571v1_alt 183977 5 + 198278 CAAGA s panTro5.chr18 65094021 5 + 78221452 CAAGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212928 5 + 77229886 CAAGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432452 5 + 17472758 CAAGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473458 5 - 152096393 TAAGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422721 5 + 70235451 TAAGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114051 5 - 75711847 TAAGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673376 5 - 18804593 TAAGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285205 5 + 18905526 TAAGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114345 5 - 72318688 TAAGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450569 5 - 1517660 TAAGA i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105318071 5 + 117903854 TAACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505185 5 - 31320352 TAAGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1700948 5 + 2203405 TAAGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3653397 5 - 14941987 TAAGA i aotNan1.NW_018502140v1 C 0 I 116 s otoGar3.GL873546 11278419 5 - 20685099 TAGGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356655 5 - 122678785 TAGGA i canFam3.chr1 C 0 I 115 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e colAng1.NW_012115433v1 3546396 121 + 6513552 I a score=11504.000000 s hg38.chr18_GL383571v1_alt 183982 1 + 198278 G s panTro5.chr18 65094026 1 + 78221452 G i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212933 1 + 77229886 G i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432457 1 + 17472758 G i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473463 1 - 152096393 G i nomLeu3.chr4 C 0 I 115 s rheMac8.chr18 57422726 1 + 70235451 G i rheMac8.chr18 C 0 I 115 s macFas5.chr18 63114056 1 - 75711847 G i macFas5.chr18 C 0 I 115 s macNem1.NW_012016688v1 13673381 1 - 18804593 G i macNem1.NW_012016688v1 C 0 I 115 s cerAty1.NW_012001075v1 13285210 1 + 18905526 G i cerAty1.NW_012001075v1 C 0 I 115 s chlSab2.chr18 60114350 1 - 72318688 G i chlSab2.chr18 C 0 I 115 s manLeu1.NW_012106698v1 450574 1 - 1517660 G i manLeu1.NW_012106698v1 C 0 I 115 s calJac3.chr13 105318076 1 + 117903854 G i calJac3.chr13 C 0 I 105 s saiBol1.JH378121 19505190 1 - 31320352 G i saiBol1.JH378121 C 0 I 116 s cebCap1.NW_016107689v1 1700953 1 + 2203405 G i cebCap1.NW_016107689v1 C 0 I 127 s aotNan1.NW_018502140v1 3653518 1 - 14941987 G i aotNan1.NW_018502140v1 I 116 C 0 s otoGar3.GL873546 11278424 1 - 20685099 G i otoGar3.GL873546 C 0 I 142 s canFam3.chr1 112356775 1 - 122678785 A i canFam3.chr1 I 115 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e colAng1.NW_012115433v1 3546396 121 + 6513552 I a score=108770.000000 s hg38.chr18_GL383571v1_alt 183983 11 + 198278 AATATTATAAA s panTro5.chr18 65094027 11 + 78221452 AATATTATAAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212934 11 + 77229886 AATATTATAAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432458 11 + 17472758 AATATTATAAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473579 11 - 152096393 AAAACTATAAA i nomLeu3.chr4 I 115 C 0 s rheMac8.chr18 57422842 11 + 70235451 AATACTATAAA i rheMac8.chr18 I 115 C 0 s macFas5.chr18 63114172 11 - 75711847 AATACTATAAA i macFas5.chr18 I 115 C 0 s macNem1.NW_012016688v1 13673497 11 - 18804593 AATACTATAAA i macNem1.NW_012016688v1 I 115 C 0 s cerAty1.NW_012001075v1 13285326 11 + 18905526 AATACTATAAA i cerAty1.NW_012001075v1 I 115 C 0 s chlSab2.chr18 60114466 11 - 72318688 AATACTATAAA i chlSab2.chr18 I 115 C 0 s manLeu1.NW_012106698v1 450690 11 - 1517660 AATACTATAAA i manLeu1.NW_012106698v1 I 115 C 0 s colAng1.NW_012115433v1 3546517 11 + 6513552 AATATTATAAA i colAng1.NW_012115433v1 I 121 C 0 s calJac3.chr13 105318182 11 + 117903854 AATACTATACA i calJac3.chr13 I 105 C 0 s saiBol1.JH378121 19505307 11 - 31320352 AATACTATACA i saiBol1.JH378121 I 116 C 0 s aotNan1.NW_018502140v1 3653519 11 - 14941987 AATACTATACA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11278567 11 - 20685099 AATAATATTAA i otoGar3.GL873546 I 142 C 0 s canFam3.chr1 112356776 11 - 122678785 AATAATATAAA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e cebCap1.NW_016107689v1 1700954 127 + 2203405 I a score=329882.000000 s hg38.chr18_GL383571v1_alt 183994 33 + 198278 TGTTTTA--AAATA--AACTCTGACACACCACCATAT s panTro5.chr18 65094038 33 + 78221452 TGTTTTA--AAATA--AACTCTGACACACCACCATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212945 33 + 77229886 TGTTTTA--AAATA--AACTCTGACACACCACCATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432469 33 + 17472758 TGTTTTA--AAATA--AACTCTGACACACCACCATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473590 30 - 152096393 TGTTATA--AAATA--AA--CTGACACA-CGCCATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422853 33 + 70235451 TGCCATA--AAACA--AACTCTGACACAACGCCGTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114183 33 - 75711847 TGCCATA--AAACA--AACTCTGACACAACGCCGTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673508 33 - 18804593 TGCCATA--AAACA--AACTCTGACACAACGCCGTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285337 33 + 18905526 TGTTATA--AAATA--AACTCTGACACAACGCCATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114477 33 - 72318688 TGTTACA--AAATA--AACTCTGACACAAAGCTGTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450701 33 - 1517660 TGTTATA--AAGTA--AACTCTGACACAACGCCATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546528 33 + 6513552 TGTTATA--AAATA--AACTCTGACACAACGCCATAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318193 33 + 117903854 TGTTATA--AAATA--AACTTGGACACAACACCATGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505318 33 - 31320352 TGTTATA--AAATA--AACTCTGACATAACACCATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1701081 33 + 2203405 TGTTATA--AAATA--AACTCTGACACAACACCATAT i cebCap1.NW_016107689v1 I 127 C 0 s aotNan1.NW_018502140v1 3653530 33 - 14941987 TGTTATA--AAATA--AACTCTGACACAACACCATAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11278578 35 - 20685099 TGTTACAAGAAATA--AAATCTAACACAAGGCCATAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356787 35 - 122678785 TGATATA--AAAAAGTAAATCTAACAAAAGGTCATAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1305298 257 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=119046.000000 s hg38.chr18_GL383571v1_alt 184027 8 + 198278 GCAAAGAT s panTro5.chr18 65094071 8 + 78221452 GCAAAGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212978 8 + 77229886 GCAAAGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432502 8 + 17472758 GCAAAGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473620 8 - 152096393 GCAAAGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422886 8 + 70235451 GCAGAGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114216 8 - 75711847 GCAGAGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673541 8 - 18804593 GCAGAGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285370 8 + 18905526 GCAGAGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114510 8 - 72318688 GCAGAGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450734 8 - 1517660 GCAGAGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546561 8 + 6513552 GCAGAGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318226 8 + 117903854 GCAAAGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505351 8 - 31320352 GCAAAGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1701114 8 + 2203405 GCAAAGAT i cebCap1.NW_016107689v1 C 0 I 3 s aotNan1.NW_018502140v1 3653563 8 - 14941987 GCAAAGAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1305555 8 - 1406956 GCAAAGAT i proCoq1.NW_012148742v1 I 257 C 0 s otoGar3.GL873546 11278613 8 - 20685099 GCAAAGAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356822 8 - 122678785 GCAAAGAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=237024.000000 s hg38.chr18_GL383571v1_alt 184035 20 + 198278 TCCACTTAGCTTTATCAATG s panTro5.chr18 65094079 20 + 78221452 TCCACTTAGCTTTATCAATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64212986 20 + 77229886 TCCACTTAGCTTTATCAATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432510 20 + 17472758 TCCACTTAGCTTTATCAATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473628 20 - 152096393 TCCACTTAGCTTTATCAATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422894 20 + 70235451 TCCACTTAGCTTTATCAACG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114224 20 - 75711847 TCCACTTAGCTTTATCAACG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673549 20 - 18804593 TCCACTTAGCTTTATCAACG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285378 20 + 18905526 TCCACTTAGCTTTATCAATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114518 20 - 72318688 TCCACTTAGCTTTATCAATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450742 20 - 1517660 TCCACTTAGCTTTATCAATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546569 20 + 6513552 TCCACTTAGCTTTATCAATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318234 20 + 117903854 TCCACTTGGCTTTATCAACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505359 20 - 31320352 TCCACTTGGCTTTATCAACA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3653571 20 - 14941987 TCCACTTGGCTTTATCAACA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1305563 20 - 1406956 TCTACTTAGTTTTATCAATG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11278621 20 - 20685099 TCTAGTTAGTTTTATCAATG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356830 19 - 122678785 TTTACTT-GCTCCATTAATG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e cebCap1.NW_016107689v1 1701122 3 + 2203405 I a score=2297233.000000 s hg38.chr18_GL383571v1_alt 184055 193 + 198278 GCAATAAAGAAAGAGGAGACAGTGGTACTGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--AGTTTCCATAGGAATGTTTATAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTAAAG-TATCAGATTAAATACAAATGTCTTATTTGCTCCCACCTGATA---TTTTACTGGAGTT s panTro5.chr18 65094099 193 + 78221452 GCAATAAAGAAAGAGGAGACAGTGGTATTGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--AGTTTCCACAGGAATGTTTATAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGtaaag-tatcagattaaatacaaatgtcttatttgctcccacctgata---ttttattggagtt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213006 193 + 77229886 GCAATAAAGAAAGAGGAGACAGTGGTATTGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--AGTTTCCACAGGAATGTTTATAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTAAAG-TATCAGATTAAATACAAATGTCTTATTTGCTCCCACCTGATA---TTTTATTGGAGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432530 193 + 17472758 GCAATAAAGAAAGAGGAGACAGTGGTATTGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--AGTTTCCATAGGAATGTTTATAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTAAAG-TTTcagattaaatacaaatgtcttatttgctcccacctgata---ttttattggagtt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473648 193 - 152096393 GCAATAAAGAAAGAGGAGACAGTGGTGTTGACCAGTTCAATGTGTTTTAGGAAAAGTTGGAGTCT--AGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTATGTTG-AAACACTA---TCACAGGG---AATACCAAGtaaag-tatcagattaaattcaaatgtcttatttgctcccacctgata---ttttattggagtt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57422914 193 + 70235451 GCAATAATGAAATAGGAGACATTGGTATGGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTaagg-tatcagattaaatacaaatgtcttatttgttcccacctgata---ttttattggagtt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114244 193 - 75711847 GCAATAATGAAATAGGAGACATTGGTATGGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTaagg-tatcagattaaatacaaatgtcttatttgttcccacctgata---ttttattggagtt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673569 193 - 18804593 GCAATAATGAAATAGGAGACATTGGTATGGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTaagg-tatcagattaaatacaaatgtcttatttgttcccacctgata---ttttattggagtt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285398 193 + 18905526 GCAATAATGAAATAGGAGACATTGGTATGGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTaagg-tatcagattaaatacaaatgtcttatttgttcccacctgata---ttttattggagtt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114538 193 - 72318688 GCAATAATGAAATAGGAGACATTGGTATGGACGAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCGTAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACGAAGTaagg-tatcagattaaatacaaatgtcttatttgttcccacctgata---ttttattggagtt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450762 193 - 1517660 GCAGTAATGAAATAGGAGACATTGGTATGGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGACTA---TCACAGGG---AATACCAAGTaagg-tatcagattaaatacaaatgtcttatttgttcccacctgata---ttttattggagtt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546589 193 + 6513552 GCAATAATGAAATAGGAGACATTGGTATGGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--GGTTTCCATAGGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAGGCTA---TCACAGGG---AATACCAAGTaagg-tatcaaattaaatacaaatgtcttatttgttcccacttgata---ttttattggagtt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318254 190 + 117903854 GCAATAAAGAAAGGGGAGACATTGGTATTGACTAGTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--AGTTTCTATATGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAAACTA---TCACAGGG---AATACCAAGTAAAA----cagattaaatacaaatgtcttatttgctcccacctgatg---ttttattggagtt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505379 193 - 31320352 GAAATAAAGAAAGGGGAATCATTGGTATTGAATAGTTCAATGTGTTTTAAGAAAAGTTGAAGGCT--AGTTTCCATATGAATGTTTGCAATAA----TGTTAGATTGTGTGTTG-AAAAACTA---TCACAGGGAATAATACCAAGTAAAA----cggattaaatacaaatgtcttatttgctcccacctaatg---ttttattggagtt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1701125 190 + 2203405 GCAATAAAGAAAGGGGAGACATTGGTATTGAATACTTCAATGTGTTTTAGGAAAAGTTGAAGTCT--AGTTTCCATATGAATGTTTACAATAA----TGTTAGATTGTGTGTTG-AAAAACTA---TCACAGGG---AATACCAAGTAAAA----CAGATTAAATACAAATGTCTCATTTGCTCCCACCCGATG---TTTTATTGGAGTT i cebCap1.NW_016107689v1 I 3 C 0 s aotNan1.NW_018502140v1 3653591 189 - 14941987 GCAGTAAAGAAAGGGGAGACATTGGTATTGACTAGTTCAATGTGTTTTAGG-AAAGTTGAAGTCT--AGTTTCCATGTGAATGTTAACAATAA----TGTTAGACTGTGTGTTG-AAAAACTA---TCACAGGG---AATACCAAGTAAAA----CAGATTAAATACAAATGTCTTATTTGCTCCCACCTGATG---TTTTATTGGAGTT i aotNan1.NW_018502140v1 C 0 I 1418 s proCoq1.NW_012148742v1 1305583 197 - 1406956 GCAATAAAGAAAGAGGAAGCATTGATATTGTTTAGTGCAGTGAGTTTTAGGAAAAGTTGAACTCTAAAGTGTTTATATGAATGTTTACAATGA----TATCAGATTCTCTGTTGAAAAAAATA---TCATGGAG---AATACCAGAAAAAGGTGTGAGATTAAATATGAATGTCTAATTTGCCCCCTTCTGATG---TTTTAATAGAGTT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11278641 206 - 20685099 GCGATAAAGAAGGAAGAGGCCTTGATATTCATTACGGCAGTGAGTGTTGGGAAAAGTTGAACTCCAAAGTG-TTACAGGAATAATTACAGTGGCATCTATCAGACTGTATGTTGGAAAAAAAAAACACACAGGG---TATATCAGGAaaaggtgtgagattaaatacaaatgtttaatttgttcccttctgatgatatgttaatggagtt i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112356849 172 - 122678785 ACAATAAACAAAGGGAAGGCATT-ATATTG-----------GAATTTTAGAAAAAGTGAAAATCTGAAGTGTTCATGTGCATGTTTACGATGG----TGTCAGATTGTGTGTTG-AAAAA-TA---TCACAGTA-------------AGGG-TATGAGATGAAGTAGAAATGTCCAACTCACTGCCTCTTGATG---CTTTATTAAGGTT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=655116.000000 s hg38.chr18_GL383571v1_alt 184248 54 + 198278 Tagaaatg-gg-atttttaaaaccacaacagcagaagaactaaagaaaatataaga s panTro5.chr18 65094292 53 + 78221452 tagaactg-gg-agttttaaaaccacaacagcagaagaactaaagaaaatataag- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213199 53 + 77229886 TAGAACTG-GG-AGTTTTAAAACCACAACAGCAGAAGAACTAAAGAAAATATAAG- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432723 53 + 17472758 tagaaatg-gg-atttttaaaaccacaacagcagaagaactaaagaaaatataag- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473841 53 - 152096393 tagaaatg-ga-atttttaaaaccacaagagcagaagaactaaagaaaatataag- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423107 53 + 70235451 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatgtaag- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114437 53 - 75711847 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatgtaag- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673762 53 - 18804593 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatgtaag- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285591 53 + 18905526 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatgtaag- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114731 53 - 72318688 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatgtaag- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 450955 53 - 1517660 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatgtaag- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546782 53 + 6513552 tagaaatg-gg-atttttaaaaccacaagagcagaagaactgaagaaaatataag- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318444 53 + 117903854 tagaaatg-ga-ttttttaaaaccacaagagcaggagagctaaggaaaatataag- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505572 53 - 31320352 tagaaatg-ga-ttttttaaaaccacaagagcaggagaactaaagaaaatataat- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1701315 54 + 2203405 TAGAAATG-GATTTTTTtaaaaccacaagagcaggagagctaaagaaaatataag- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3655198 53 - 14941987 tagAAATG-GA-TTTTTtaaaaccacaagagcaggagaactaaagaaaatataag- i aotNan1.NW_018502140v1 I 1418 C 0 s proCoq1.NW_012148742v1 1305780 52 - 1406956 TAGAAATA-AG-ATTT-Ttaaaccaaaaaataaggggaactaaagaaaatataag- i proCoq1.NW_012148742v1 C 0 I 1 s otoGar3.GL873546 11278847 53 - 20685099 tagaagta-aa-ttttcttaaaccacagggtcaagggaattaaagaaaatataag- i otoGar3.GL873546 C 0 I 258 s canFam3.chr1 112357021 54 - 122678785 TAGAAATGAGA-ATTTTtaaaaacacaagatcaagggaactaaagagaagataag- i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=4451455.000000 s hg38.chr18_GL383571v1_alt 184302 416 + 198278 aaaa-----------------------------aaaaa---a-aaaaatttgaaatatagaaaata--------ggtgacttaccatacctgagaaagctgtcaagtattt-gtcactggaaaaactgaaaacat---aggattacagtgcagtgtcctgaaaataccaaggaatttgagccaccagattcatgagggaatggaaatgaa-ggtttcaacatgaggaggatGAATTATTTAGGTTGTTGATTAGGTGTTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTCGGCAAATTGCCTTAGCAAATG-GGAAATGGCGTTTTGAAAAAAGACATCTATGGAATAGAACAACGACA----AATA-CCCACCCAGTTTAATTCACTTCTGCAG-TGAGTC-AAATGCTTCTTGGCTTCATTGAACACAAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGCTTTCTAAAAGTAT s panTro5.chr18 65094345 414 + 78221452 --aa-----------------------------aaaaa---a-cgaaatttgaactatagaaaata--------ggtgacttaccatacctgagaaagctgtcaagtattt-gtcactggaaaaactgaaaacat---aggattacagtgcagtgtcctgaaaataccaaggaatttgagccaccagattcatgagggaatggaaatgaa-ggtttcaacatgaggaggatGAATTATTTAGGATGTTGATTAGGTGTTTAAGAAA-T-GTTAGTTGAAACCTTGTGTTCGGCAAATTGCCTTAGCAAATG-GGAAATGGCGTTTTGAAAAAAGACATCTATGGAATAGAACAACGACA----AATA-CCCACCCAGTTTAATTCACTTCTGCAG-TGAGTC-AAATGCTTCTTGGCTTCATTGAACACAAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGCTTTCTAAAAGTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213252 414 + 77229886 --AA-----------------------------AAAAA---A-CGAAATTTGAACTATAGAAAATA--------GGtgacttaccatacctgagaaagctgtcaagtattt-gtcactggaaaaactgaaaacat---aggattacagtgcagtgtcctgaaaataccaaggaatttgagccaccagattcatgagggaatggaaatgaa-ggtttcaacatgaggaggatGAATTATTTAGGATGTTGATTAGGTGTTTAAGAAA-T-GTTAGTTGAAACCTTGTGTTCGGCAAATTGCCTTAGCAAATG-GGAAATGGCGTTTTGAAAAAAGACATCTATGGAATAGAACAACGACA----AATA-CCCACCCAGTTTAATTCACTTCTGCAG-TGAGTC-AAATGCTTCTTGGCTTCATTGAACACAAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGCTTTCTAAAAGTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5432776 415 + 17472758 --aa-----------------------------aaaaa--ca-caaaatttgaaatatagaaaata--------ggtgatttaccatacctgagaaagctgtcaagtattt-gtcactggaaaaactgaaaacat---aggattacagtgcagtgtcctgaaaataccaaggaatttgagccaccagattcatgagggaatggaaatgaa-ggtttcaacatgaggaggatGAATTATTTAGGATGTTGATTAGGTGTTTAAGAGA-G-GTTAGTTGAAACCTTGTGTTCGGCAAATTGCCTTAGCAAATG-GGAAATGGCGTTTTGAAAAAAGACATCTATGGAATAGAACAACAACA----AATA-CCCACCCAGTTTAATTCAGTTCTGCAG-TGAGTC-AAATGCTTCTTGGCTTCATTGAACACAAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGCTTTCTAAAAGTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139473894 413 - 152096393 --aa-----------------------------aaaaaacca-caaaatttgaaatatagaaaata--------ggtgacttaccatacctgagaaagctgtcaagtattt-gtcactggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattcatgagggaatggaaatgaa-ggtTTCAACATAAGGGGCATGAATTATTTAGGATGTTGATTAGGTGTTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTCAGCAAACTGCCTTAGCAAATG-GGAAATGGCGTTTTG-AAAAAGACATCTATGGAATAGAACA---ACA----AAAA-CCCACCCAGTTTAATTCAGATCTGCAG-TGAGTC-AAATGCTTCTTGGCTTCATTGAACACAAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGCTTTCTAAAAGTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423160 415 + 70235451 --aa-----------------------------aaaaa---accaaattttgaaatatagaaaata--------aatgacttaccatagctgagaaagctgtcaagtattt-gtcagtggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattccagagggaatggaaatgaa-agtttcaagatgaggaggatGAATTATTTAGGATGTTGATTAGGTATTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTTGTCAAATTGCCTTAGCAAATG-GGAAATGGCATTTTGAAAAAAGACATCTATAGAATAGAACAACAACA----AAAC-CCCACCCA-TTTAATTCAGTTCTGCAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACCAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTCTAAAAGTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114490 415 - 75711847 --aa-----------------------------aaaaa---accaaattttgaaatatagaaaata--------aatgacttaccatagctgagaaagctgtcaagtattt-gtcagtggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattccggagggaatggaaatgaa-agtttcaagatgaggaggatGAATTATTTAGGATGTTGATTAGGTATTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTTGTCAAATTGCCTTAGCAAATG-GGAAATGGCATTTTGAAAAAAGACATCTATAGAATAGAACAACAACA----AAAC-CCCACCCA-TTTAATTCAGTTCTGCAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACCAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTCTAAAAGTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13673815 415 - 18804593 --aa-----------------------------aaaaa---accaaattttgaaatatagaaaata--------aatgacttaccatagctgagaaagctgtcaagtattt-gtcagtggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattccggagggaatggaaatgaa-agtttcaagatgaggaggatGAATTATTTAGGATGTTGATTAGGTATTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTTGTCAAATTACCTTAGCAAATG-GGAAATGGCATTTTGAAAAAAGACATCTATAGAATAGAACAACAACA----AAAC-CCCACCCA-TTTAATTCAGTTCTGCAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACCAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTCTAAAAGTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13285644 413 + 18905526 ---a-----------------------------aaaaa---accaaattttgaaatatagaaaata--------aatgacttaccatagctgagaaagctgtgaagtattt-gtcagtggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattcgggagggaatggaaatg---agtttcaagatgaggaggatGAATTATTTAGGATGTTGATGAGGTATTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTCATCAAATTGCCTTAGCAAATG-GGAAATGGCATTTTGAAAAAAGACATCTATAGAATAGAACAACAACA----AAAC-CCCACCCAGTTTAATTCAGTTCTGCAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACGAACCAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTCTAAAAGTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60114784 412 - 72318688 --aa-----------------------------aaaaa---a-caaattttgaaatatagaaaata--------aatgacttaccatacctgagaaagctgtcaagtattt-gtcagtggaaaaattgaaaacat---atgattacagtgcagtgacctgaaaatatcaaggaatctgagccaccagattcgggagggaatggaaatg---agtttcaagatgaggaggatGAATTATTTAGCATGTTGATTAGGTATTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTTGTCAAATTGCCTTAGCAAATG-GTAAATGGCATTTTGAAAAAAGACATCAATAGAATAGAACAACAACG----AAAC-CCCACCCAGTTTAATTCAGTTCTGCAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACCAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTC-AAAAGTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451008 415 - 1517660 --aa-----------------------------aaaaa---accaaattttgaaatatagaaaata--------aatgacttaccatagctgagaaagctgtcaagtatttagtcagtggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattcgggagggaatggaaatg---agtttcaagatgaagaggatGAATTATTTAGGATGTTGATGAGGTATTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTCATCAAATTGGCTTAGCAAATG-GGAAATGGCATTTTGAAAAAAGACATCTATAGAATAGAACAACAACA----AAAC-CCCACCCAGTTTAATTCAGTTCTGCAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACGAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTCTAAAAGTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3546835 417 + 6513552 -gaa-----------------------------aaaaa---accaaattttgaaatatagaaaata--------aatgacttaccatacctgagaaagctgtcaagtattt-gtcagtggaaaaattgaaaacat---atgattacagtgcagtgtcctgaaaataccaaggaatctgagccaccagattcgggagggaatggaaatgaa-agtTTCAGGATGAGGAGGATGAATTATTTAGGATGTGGATTAGGTGTTTAAGAAA-G-GTTAGTTGAAACCTTGTGTTCGTCAAATTGCCTTAGCAAACG-GGAAATGGCATTGTGAAAAAAGACATCTATAGAATAGAACAGCAACA----AAAC-CCCACCCAGTTTAATTCAGTTCTACAG-TGAGTCAAAATGCTTCTTGGCTTCATTGAAGACGAAACAATTAATA--------------------------------TGTCCCTGTCAACCAGTTTTCTAAAAGTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318497 401 + 117903854 --aa-----------------------------aaaaa---t---aaatttgaaatctagaaaata--------ggtgacttaccatatctgagaaagctatcaagtattt-gtcagtgaaaaagttg-aaatat---ctgattacagtgca-tgtcctgaaaataccaaggaatctgagccatcagattcctgaggaaatggaaatgaa-gatttcaacatgaggagcattagttATTTAGGTTGTTGATTAGGTGTTTAAGAAA-G-GTTAGTTAAAACCTTGTGTTCAGCGAATTATCTTAGGAAATG-GGAATTAGCATTTTGAAAAAAGACATCTATAGAATACAACAACAGCAA--GAAAA-CCTACCCAGTTTAATTCAGTTCTTCAG-TGAGTCAAAATGCTGCTTGGTTTCATTGAACACAAAA--------------------------------------------CACTGTCATACAGCTTTCTAAAAGTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19505625 413 - 31320352 --aa-----------------------------aaaca---t---aaatttgaaatctagaaaata--------ggtgacttaccatatctgagaaagctatcaagtatcc-atcagtgaaaaagttg-aaacat---ctgattacagtgcagtgtcctgaaaataccaaggaatctgagccatcagattcccaaggaaatggaaatgaa-gatttcaacatgaggagcattagttATTCAGGATGTTGATTAGGTGTTTAAGAAA---GTTAGTTAAAACCTTGTATTCAGCAAATTATCTTAGGAAATG-GGAATTGGCATTTTGAAAAAAGACGTCTATAGAATATAACAACAGCAA--AAAAA-CCTACCCAGTTTAATTCAGTTCTTCAG-TGAGTCAAAATGCTGCTTGGTTTCATTGAACACAAAACAATTAATA--------------------------------CATCACTGTCATACAGCTTTCTAAAAGTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1701369 414 + 2203405 --aa-----------------------------aaaaa---t---aaatttgaaatctagaaaata--------ggtgacttaccatatctgagaaagctatcaagtatcc-gtcagtgaaaaagttg-aaacat---ctgattacagtgcagtgtcctgaaaataccaaggaatctgagccatcagattcccaaggaagtggaaatgaa-gatTTCAACATGAGGAGCACTAGATATTTAGGATGTTGATTAGGTGTTTAAGAAA-G-TTTAGTTAAAGCCTTGTGTTCAGCAAATTATCTTAGGAAATG-GGAATTGGCATTTTGAAAAAAGACATCTATAGAATATAACAACAGCAA--AAAAA-CCTACCCAGTTTAATTCAGTTCTTCAG-TGAGTCAAAATGCTGCTTGGTTTCATTGAACACAAAACAATTAATA--------------------------------CATCACTGTCATACAGCTTTCTAAAAGTAT i cebCap1.NW_016107689v1 C 0 I 6280 s aotNan1.NW_018502140v1 3655251 414 - 14941987 --aa-----------------------------aaaaa---t---aaatttgaaatctaaaaaata--------ggtgacttaccatatctgagaaagctatcaagtatct-gtcagtgaaaaagttg-aaacat---ctgattacagtgcagtgtcctgaaaataccaagaaatctgagccatcagattcccaaggaaatggaaatgaa-gatttcaatatgaggagcattagttATTTAGGATGTTGATTAGGTGTTTAAGAAA-G-GTTAGTTAAAACCTTGTGTTCGGCAAATTATCTTAGGAAATG-GAAATCAGCATTTTGAAAAAAGACATCTATAGAATACAACAACAGCAA--AAAAA-CCTACCCAGTTTAATTCAGTTCTTCAG-TGGGTCAAAATGCTGCTTGGTTTCATTGAACACAAAACAATTAATA--------------------------------CATCACTGTCATACAGCTTTCTAAAAGTAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1305833 422 - 1406956 ---------------------------------aaata---a-taaattttggaatctagaaaatagag----ggataacttaccatacctgagaaagctgttagataact-ggcagtaaaaaagttgagaac-tataatgattgcagtgcc--ctcctgacaataccaaggaatctgagacgacagatacctaagggattgggaatgaaggGTTTCAATGGGAGGGAGATTAGTTGTTTAGGATGTTGATTAGCTGTTTCAGAAA-GAATTAGTTGAAACC-TGTGTTTGGCAAATTACCTTAGCAAATG-GGAATCGGCATTTTGCATGAAGCCATCTATATAATAGAAGAACAACAACCAAAAA-ATCACCCAGTTAATTCAAGTTCTGCAG-TAAGTCAGACTGCTTCTTGGCTCCACTGAGGACAAAACTATTAGTA--------------------------------TATCCCTATCATACAACTTTTTAAAAGTAT i proCoq1.NW_012148742v1 I 1 C 0 s otoGar3.GL873546 11279158 430 - 20685099 --aaaaaaaaaaaaaaagaaagaaaatataagaaaata---a-tacatttttgcatctagaaaatatag----ggatgacttaccctacctgaaaaagctgcaatgtaact-ggtaataaaaaagttgagaacgtataatgattacagggca--accttgacagtaccaaggaatccgagatgccaggtacctaagggg-tgggaatggggaatttcaggaagaaggagattagtCATTTG--------------------AGAAA-GCATTAGTTGAAACC-TGTGTTT-GCAAATTACCTCACCAAATG-GGAATTGGCATTTTGAACAAAG---TCTATATAGTAGGAAAAAAAAAAAAAAAAACAGTGCCCAGTTAATTTAAGTTCTTCAGTTAAGTCAGAATGCTTCTTGCCTCCTCTGAGGAC-AAACAATTAATA--------------------------------TATTCATGTGATACAGCTTTCCAAAGTTAT i otoGar3.GL873546 I 258 C 0 s canFam3.chr1 112357075 438 - 122678785 --aa-----------------------------aaata---c---agttttgaagcacagaaaatagagaggtaggtgacttagcatatctgagaaaacaatcacttgatt-ggcagtggaagagctgagaaCAAGTAGTGTTTCCATGACCAGATCCTAAAAATATCAC-AAATCCCAGGCA-CAGGTATCTGAAGGT-TGTATGTAAG-CGATTCAGCAGGAGGAG---TAGTTGTTGAAG-TGTTGGTTAGATGTTTAAGAAAAG-GTTAGTTGAAACC--GCGTTCAGCAAATTACCTTAGCCAAGGAGGAATTTGCATT-TGGAATAAGACACCTCTCCGA------AACAGCAC---AAAG-CCCAC-----TTAATTCAGTTCTACAG-GGAATCAGACTGATCTTTGGCTCCAATGAAGACAAAACAACTAATGACatttaaattaaaaatattttgaattttaataGTCCGTCCCACACACTTTTCTGAAAGTAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=18641.000000 s hg38.chr18_GL383571v1_alt 184718 2 + 198278 TG s panTro5.chr18 65094759 2 + 78221452 TG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213666 2 + 77229886 TG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433191 2 + 17472758 TG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474307 2 - 152096393 TG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423575 2 + 70235451 TA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114905 2 - 75711847 TA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674230 2 - 18804593 TA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286057 2 + 18905526 TA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115196 2 - 72318688 TA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451423 2 - 1517660 TA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547252 2 + 6513552 TA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318898 2 + 117903854 TA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506038 2 - 31320352 TA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3655665 2 - 14941987 TA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306255 2 - 1406956 TG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11279588 2 - 20685099 TG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112357513 2 - 122678785 TA i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e cebCap1.NW_016107689v1 1701783 6280 + 2203405 I a score=168977.000000 s hg38.chr18_GL383571v1_alt 184720 14 + 198278 TAAGTTTCTATCAT s panTro5.chr18 65094761 14 + 78221452 TAAGTTTCTATCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213668 14 + 77229886 TAAGTTTCTATCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433193 14 + 17472758 TAAGTTTCTATTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474309 14 - 152096393 TAAGTTTCTATTAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423577 14 + 70235451 TAAGTTTCTGTTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114907 14 - 75711847 TAAGTTTCTGTTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674232 14 - 18804593 TAAGTTTCTGTTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286059 14 + 18905526 TAAGTTTCTGTTAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115198 14 - 72318688 TAAGTTTCTGTTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451425 14 - 1517660 TAAGTTTCTGTTAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547254 14 + 6513552 TAAGTTTCTATTAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318900 14 + 117903854 TAAATTTCTATTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506040 14 - 31320352 TAAATTTCTATTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708063 14 + 2203405 TAAATTTCTATTGT i cebCap1.NW_016107689v1 I 6280 C 0 s aotNan1.NW_018502140v1 3655667 14 - 14941987 TAAATTTCTATTAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306257 14 - 1406956 TAAGTTACTAGTAT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11279590 14 - 20685099 TACGTAACTATTAT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112357515 14 - 122678785 TAAGTCACTTTTAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I a score=908811.000000 s hg38.chr18_GL383571v1_alt 184734 83 + 198278 TTATGTTAAAATTTGGTATGGTGGCAATGATTTCACATATATTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA s panTro5.chr18 65094775 83 + 78221452 TTATGTTAAAATTTGGTATGGTGGCAATGATTTCACATATATTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213682 80 + 77229886 TTATGTTAAAATTTGGTATGGTGGCAATGATTTCACATATAT---TAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433207 83 + 17472758 TTATGTTAAAATTTGGTATGGTGGCAATGATTTCACATATATTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474323 81 - 152096393 TTATGTTTAAATTTGGTATGGTGGCAATGATTTCAC--ATATTAATAATTGGATAATGGATGAAATTATTTTGCAGGTATTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423591 83 + 70235451 TTATGTTAAAATTTGGTATGGTGGCAATGATTTTACATATGTTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63114921 83 - 75711847 TTATGTTAAAATTTGGTATGGTGGCAATGATTTTACATATGTTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674246 83 - 18804593 TTATGTTAAAATTTGGTATTGTGGCAATGATTTTACATATGTTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286073 83 + 18905526 TTATGTTAAAATTTGGTATGGTGGCAATGATTTTACATACGTTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115212 83 - 72318688 TTATGTTAAAATTTGGTATGGTGGCAATGATTTTACATATGTGAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451439 83 - 1517660 TTATGTTAAAATTTGGTATGGTGGCAATGATTTTACATACGTTAATAATTGGATTATGGATGAAATTATTTTGCAGGTATTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547268 83 + 6513552 TTATGTTAAAATTTGGTATGATGGCAATGGTTTTACATATGTTAATAATTGGATTATGGGTGAAATTATTTTGCAGGTATTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318914 76 + 117903854 TTGTGTTAAAATTTGGTATAGTGCCAAAGATTTTACATATATT-------GGATTATGGATGAAATTATGTTGCTAGTATTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506054 83 - 31320352 TTGTTTTAAAATTTGGTATAGTGACAAAGATTTTACATATATTAATAATGGGATTATGGATGAAATTATGTTGCTAGTATTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708077 83 + 2203405 TTGTGTTAAAATTTGGTATAGTGCCAAAGATTTTACATATGCTAATAATTGGATTATGGATGAAATTATATTGCTAGTATTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3655681 83 - 14941987 TTGTGTTAAAATTTGGTATAGTGCCAAATATTTTACATATATTAATAATTGGATTATGGATGAAATTATGTTGCTAGTATTCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306271 83 - 1406956 CTGAGTTAAAACTTATTATAGTTTCAACAATTTTACATATATTAATAATTGGATTATGGATGGAATTCCTTTGCACATATTCA i proCoq1.NW_012148742v1 C 0 C 0 s canFam3.chr1 112357529 74 - 122678785 ---------AATTTGTGAGAGTTTCAACAATTCTGCATATATTAATAACTGGATCATGGCTAAATTTCCTTTGCACGCATGCA i canFam3.chr1 C 0 I 2814 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=885500.000000 s hg38.chr18_GL383571v1_alt 184817 91 + 198278 CAATGGTAGAAATACATAATAATGATTTTTT------T-GTTTATGGAAATTTGAAAGCACATTTCTTCACACATCCATTCAATAAATATTTAC-TGTA s panTro5.chr18 65094858 91 + 78221452 CAATGGTAGAAATACATAATAATGATTTTTT------T-GTTTATGGAAATTTGAAAGCACATTTCTTCACACATCCATTCAATAAATGTTTAC-TGTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213762 91 + 77229886 CAATGGTAGAAATACATAATAATGATTTTTT------T-GTTTATGGAAATTTGAAAGCACATTTCTTCACAcatccattcaataaatgtttac-tgta i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433290 91 + 17472758 CAATGGTAGAAATACATAATAATGATTTTTT------T-GTTTATGGAAATTTGAAAGCACATTTCTTCACACATCCATTCAATAAATGTTTAC-TGTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474404 91 - 152096393 CAATGGTAGAAATACATAATAATGATTTTTT------T-GTTTATGGAAATTTGAAAGCACATTTCTTCACAcgtccattcaataaatgtttaa-tgta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423674 95 + 70235451 CAATGGTAGAAATACACAATAATTATTTTTT--TTTCT-GTTTTTGGAAATTTGAAAGCACATTGCTTCACACATCCATTCTATAAATGTTTAC-TGTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115004 95 - 75711847 CAATGGTAGAAATACACAATAATTATTTTTT--TTTCT-GTTTTTGGAAATTTGAAAGCACATTGCTTCACACATCCATTCTATAAATGTTTAC-TGTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674329 95 - 18804593 CAATGGTAGAAATACACAATAATTATTTTTT--TTTCT-GTTTTTGGAAATTTGAAAGCACATTGCTTCACACATCCATTCTATAAATGTTTAC-TGTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286156 97 + 18905526 CAATGGTAGAAATACACGATAATGATTTTTTTGTTGTT-GTTTTTGGAAATTTGAAAGCACATTGCTTCACAcatccattcaataaatgtttac-tgta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115295 94 - 72318688 CAATGGTAGAAATACACAATAATGATTTCTTT-TTG---GTTTTTGGAAATTTGAAAGCACATTTCTTCACACATCCATTCAATAAATGTTTAC-TGTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451522 97 - 1517660 CAACGGTAGAAATACACGATAATGATTTTTTTGTTGTT-GTTTTTGGAAATTTGAAAGCACATTGCTTCACAcatccattcaataaatgtttac-tgta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547351 94 + 6513552 CAATGGTAGAAATACACAATGATGATTTTT---TTTCT-GTTTTTGGAAATTTGAAAGCACATTTCTTCACAcattcattcaataaatgtttac-tgta i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105318990 85 + 117903854 CAATGGTAGAAATACAT-------ATATTTT-----TT-ATTTATAGAAATTTGAAAGAAAATTTATTCACAcatcaattcaataaatgtttac-tgta i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506137 92 - 31320352 CAATGGTAGAAATACATATTAATGATTTTTT-----TT-GTTTATGGAAATTTGAAAGCAAATTTATTCACAcatcaattcaataaatgtttac-tgta i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708160 94 + 2203405 CAATGGTAGAAATACATATTAATGATGTTTT-----TTCGTTTATGGAAATTTGAAAGCAAATTTATTCACACATCAGTTAAATAAATGTTTACTTGTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3655764 92 - 14941987 CAATGGTAGAAATACATATTAATGATTTTTT-----TT-GTTTATGGAAATTTGAAAGCAAATTTATTCACACATCAATTCAATAAATGTTTAC-TGTA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306354 89 - 1406956 CAATGGTAGAAAGAAATAATAATGAATTTTT------T-GTCTACTGAACTTTGAAAGCACATTTATTCACACATCTAT--AATAAATGTTTAC-TGTA i proCoq1.NW_012148742v1 C 0 I 139 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=1228385.000000 s hg38.chr18_GL383571v1_alt 184908 135 + 198278 -AATATACTAGGGATTGGGTGATTTGGGGAGATAATGAACTATGTAAATGTGGGCCAGCTTTTCAAATTGCTCTTAGCCT---AACTAGGAAGTCAGATGCTAACAATAACTAATACAATATGTGGGGGAAACATCTAT s panTro5.chr18 65094949 135 + 78221452 -AATATACTAGGGATTGGGTGATTTGGGGAGATAATGAACTATGTAAATGTGGGCCAGCTTTTCAAATTGCTCTTAGCCT---AACTAGGAAGTCAGATGCTAACAATAACTAATACAATATGTGGGGGAAACATCTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213853 135 + 77229886 -aatatactagggattgggtgatttggggagataatgaactatgtaaatgtgggccagcttttcaaattgctcttagcct---aactaggaagtcagatgctaacaataactaatacaatatgtgggggaaacatctat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433381 135 + 17472758 -AATATACCAGGGATTGGGTGATTTGGGGAGAAAATGAACTATGTAAATGTGGGCCAGCTTTTCAAATTGCTCTTAGCCT---AACTAGGAAGTCAGATGCTAACAATAACTAATACAGTATGTGGGGGAAACATCTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474495 135 - 152096393 -aatatactaggaattgggtgatttggggagataatgaactatgtaaatatgggccagcttttcaaattgctcttagcct---aactgagaagtcagatgctaaaaataactaatacaatatgtgggggaaacatcaat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423769 136 + 70235451 CAATATACTAGGAACTGGGTGATTTGGGGAGCTAATGAACTATGTAAACGTGGGCCAGCTTTTCAAATTTTTCTTAGCCT---AACTGGGAAGTCAGATGCTAACAATAACTAATACAGTATGTGGGGGAAACGTCTAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115099 136 - 75711847 CAATATACTAGGAACTGGGTGATTTGGGGAGCTAATGAACTATGTAAACGTGGGCCAGCTTTTCAAATTTTTCTTAGCCT---AACTGGGAAGTCAGATGCTAACAATAACTAATACAGTATGTGGGGGAAACGTCTAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674424 136 - 18804593 CAATATACTAGGAACTGGGTGATTTGGGGAGCTAATGAACTATGTAAACGTGGGCCAGCTTTTCAAATTTTTCTTAGCCT---AACTGGGAAGTCAGATGCTAACAATAACTAATACAGTATGTGGGGGAAACGTCTAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286253 136 + 18905526 caatatactaggaactgggtgatttggggagctaatgaactatgtaaaagtggaccagcttttcaaattgttcttagcct---aactgggaagtcagatgctaacaacaactaatacaatatgtgggggaaacatctat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115389 136 - 72318688 CAATATACTAGGAACTGGGTGATTTGGGGAGCTAATGAACTATGTAAACGTGGGCCAGCTTTTCAAATTGTTCTTAGCCT---AACTGGGAAGTCAGATGCTAACAACAACTAATACAATATGTGGGGGAAACATCTAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451619 136 - 1517660 caatatactaggaactgggtgatttggggagctaatgaactgtgtaaaagtggaccagcttttcaaattgttcttagcct---aactgggaagtcagatgctaacaacaactaatacaatatgtgggggaaacatctat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547445 136 + 6513552 caatatactaggaactgggtgatttggggagctaacgaactatgtaaacatgggccagcttttcaaattgttctaagcct---aactgggaagtcagatgctaacaacaactaatacgatatgtgggggaaacatctat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319075 134 + 117903854 ctatatactaggaattgggtgatttggggacataatgTACTTGGTGATCATGGGCCGGCTTTCCAAA-TGTTCTTATCCT---ACCTGGGATGTCAGATGCTAACAATAACTAATACAATATGTGGCAGGAA-ATCTAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506229 137 - 31320352 ctgtatactagaaattgggtgatttggggacataatgAACTTGGTGATTACGGGCCAGCTTTCCAAA-TGTTCTTATCCTTAAACCTGGGAAGTCAGATGCTAACAATAAGTAATACAGTATGTGGTGGGAA-ATCTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708254 134 + 2203405 CTATATACTAGGAATTGGGTGATTTGGGGACATAATTAACTTGGTGATCATGGGCCAGCTTTCCAAA-TGTTCTTATCCT---ACCTGGGAAGTCAGATGCTAACAATAACTAATACAATATGTGGTGGGAA-ATCTGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3655856 134 - 14941987 CTATATACTAGGAATTGGATGATTTGGGGACATAATGAACTTGGTGATCATGGGCCAGCTTTCCAAA-TGTTCTTATCCT---ACCTGGGAAGTCAGATGCTAACAATAACTAATGCAATATGGGGCAGGAA-ATCTAT i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1306443 139 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=447335.000000 s hg38.chr18_GL383571v1_alt 185043 39 + 198278 TTTGGATGTGCACACATACTTCAGGAACACTGAGGAAGG s panTro5.chr18 65095084 39 + 78221452 TTTGGATGTGCACACATACTTCAGGAACACTGAGGAAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64213988 39 + 77229886 tttggatgtgcacacatacttcaggaacactgaggaagg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433516 39 + 17472758 TTTGGGTGTGCACACATACTTCAGGAACACTGAGGAAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474630 39 - 152096393 tttaggtgtgcacacatacttcaggaacactgaggaagg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423905 39 + 70235451 TTTGAGTGTGCACACATACTTCAGGAACACTGAGGAAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115235 39 - 75711847 TTTGAGTGTGCACACATACTTCAGGAACACTGAGGAAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674560 39 - 18804593 TTTGAGTGTGCACACATACTTCAGGAACACTGAGGAAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286389 39 + 18905526 tttgagtgtgcacacatacttcaggaacactgaggaagg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115525 39 - 72318688 TTTGAGTGTGCACACATACTTCGGGAACACTGAGGAAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451755 39 - 1517660 tttgagtgtgcacacatacttcaggaacactgaggaagg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547581 39 + 6513552 tttgagtgtgcacacatacttcaggaacactgaggaagg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319209 39 + 117903854 CTTGGATGTGCACACATACTTCAGGAACACTGAGGAAGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506366 39 - 31320352 CTTGGACGTGCACACATACTTCAGGAACACTGAGGAAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708388 33 + 2203405 CT------TGCACACATACTTCAGGAACACTGAGGAAGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3655990 39 - 14941987 CTTGGATGTGCACACATACTTCAGGAACACTGAGGAAGG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306582 39 - 1406956 TTTGGATGTGCACATAGATTTCAGGAACACTGAGCAAGG i proCoq1.NW_012148742v1 I 139 I 84 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=1111936.000000 s hg38.chr18_GL383571v1_alt 185082 122 + 198278 ATAATTGTTTCTTCACGGGAAGG-AATTTACGAGAGTGGATTACCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTTA s panTro5.chr18 65095123 122 + 78221452 ATAATTGTTTCTTCACGGGAAGG-AATTTACGAGAGTGGATTACCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214027 122 + 77229886 ATAATTGTTTCTTCACGGGAAGG-AATTTACGAGAGTGGATTACCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433555 122 + 17472758 ATAATTGTTTCTTCATGGGAAGG-AATTTACGAGAGTGGATTACCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGGACTATACCGGTGATTTACCTGAGAGCTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474669 122 - 152096393 ATAATTGTTTCTTCATGGGAAGG-AATTTATGAGAGTGGATTACCAATGCCCTCCACTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57423944 122 + 70235451 AAAATTGTTTCTTCATGGGAAGG-AATTTACAAGCATGGATTAGCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115274 122 - 75711847 AAAATTGTTTCTTCATGGGAAGG-AATTTACAAGCATGGATTAGCAATGCCCTCCAGTCTCTATCCACATCTACCGACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674599 122 - 18804593 AAAATTGTTTCTTCATGGGAAGG-AATTTACAAGCATGGATTAGCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCGGTGATTTACCTGAGAGCTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286428 123 + 18905526 ATAATTGTTTCTTCACGGGAAGGAAATTTACAAGCGTGGATTAGCGATGCCCTCCAGTCTCTATCCACATCTACCCATAGGCACCAGGCTTCCAACTATACCGGTGATTTACCTGAGAGCTTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115564 123 - 72318688 ATAATTGTTTCTTCACGGGAAGGAAATTTACAAGCGTGGATTAGCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTTGAACTATACCAGTGATTTACCTGAGAGCTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451794 123 - 1517660 ATAATTGTTTCTTCACGGGAAGGAAATTTACAAGCGTGGATTAGCGATGCCCTCCAGTCTCTATCCACATCTACCCATAGGCACCAGGCTTCCAACTATACCGGTGATTTACCTGAGAGCTTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547620 123 + 6513552 ACAATTGTTTCTTCACGGGAAGGAAATTTACAAGCGTGGATTAGCAATGCCCTCCAGTCTCTATCCACATCTACCCACAGGCACCAGGCTTCGAACTATACCAGTGATTTACCTGTCAGCTTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319248 116 + 117903854 A----TGTTTCTGCATGGGTGGG-AATTTATGAGAGTGGATTACCAGTGCCCTCCAGTCTCTATCTACATCTCCCCACA-GCACCAGCCTTCCAA-TATACTGGTGATTTACCTAAGAGCTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506405 116 - 31320352 A----TGTTTCTGAATGGGAAGG-AATTTATGAAAGTGGATTACCAGTGCCCTCCAGTCTCTATCTACATCTACCCACA-ATACCAGGCTTCCAA-TATACTGGTGATTTACCTGAGAGCTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708421 116 + 2203405 A----TGTTTCTGCATGGGAAGG-AATTTATGAGAGTGGATTACCAGTGCCTTCCGATCTCTATCTACATCTACCCACA-GCACCAGGCTTCCAA-TATACTGGTGATTTACCTGAGAGCTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656029 116 - 14941987 A----TGTTTCTGCATGGGAAGG-AATTTATGAGAGTGGATTACCAGTGCCCTCCAGTCTCTATCTACATCTACCCACA-GCACCAGGCTTCCAA-TATACTGGTGATTTACCTGAGAGCTTA i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1306621 84 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=609971.000000 s hg38.chr18_GL383571v1_alt 185204 55 + 198278 CCTTTGCTCATCCTGTTCCTATGTTTGGACTGAGCCTTTCACTTGCCTCTTTATA s panTro5.chr18 65095245 55 + 78221452 CCTTTGCTCATCCTCTTCCTATGTTTGGACTGAGCCTTTCACTTGCCTCTTTATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214149 55 + 77229886 CCTTTGCTCATCCTCTTCCTATGTTTGGACTGAGCCTTTCACTTGCCTCTTTATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433677 55 + 17472758 CCTTTGCTCATCCTGTTCCTATGTTTGGACTGAGCCTTTCACTTGCCTCTTTATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474791 55 - 152096393 CCTTTGCTCATCCTGTTCCTATGCTTGGACTGAGCCTCTCACTTGCCTCTTTATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424066 55 + 70235451 TCTTTGCTCATCCTGTTCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115396 55 - 75711847 TCTTTGCTCATCCTGTTCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674721 55 - 18804593 TCTTTGCTCATCCTGTTCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286551 55 + 18905526 TCTTTGCTCATCCTGTTCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115687 55 - 72318688 TGTTTGCTCATCCTGTGCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451917 55 - 1517660 TCTTTGCTCATCCTGTTCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547743 55 + 6513552 TCTTTGCTCATTCTGTTCCTATGCTTGCACTGAGCCTTTCACTTACCTCTTTATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319364 55 + 117903854 CCTTTGCACATCCTGTTTCTGTGTTTGGACTGAGCCTTTCACTTACCTCTGTATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506521 55 - 31320352 CCTTTGCTCATCCTGTTTCTATGCTTGAACTGAGCCTTTCACTTACCTCTGTATA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708537 55 + 2203405 CCTTTGCTCATCCTGTTTCTATGCTTGGACTGAGCCTTTCACTTACCTCTGTATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656145 55 - 14941987 CCTTTGCTCATCCTGTTTCTATGCTTGGACTGAGCCTTTCACTTACCTCTGTATA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306705 55 - 1406956 CCTTTGCTCTTCCTATTCCTATGCTTGGGCTGTACCTGTCACTTGCCTCTGTATA i proCoq1.NW_012148742v1 I 84 I 223 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e dasNov3.JH575754 536676 2003 - 2150887 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=662266.000000 s hg38.chr18_GL383571v1_alt 185259 69 + 198278 GGATGATGTTATGAAGACTTAGGCTTAAGACTCAGATTGAATATGTGTTG-AAAAAATAAAACAAATCAA s panTro5.chr18 65095300 69 + 78221452 GGATGATGTTATGAAGACTTAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214204 69 + 77229886 GGATGATGTTATGAAGACTTAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433732 69 + 17472758 GGATGATGTTATGAAGACTTAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474846 69 - 152096393 GGATGATGTTATGAAGACTTAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAACATAAAACAAATCAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424121 69 + 70235451 GGATGATGTTACGAAGACTCAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115451 69 - 75711847 GGATGATGTTACGAAGACTCAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674776 69 - 18804593 GGATGATGTTACGAAGACTCAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286606 69 + 18905526 GGATGATGTTACGAAGACTCAGGCTTCAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115742 69 - 72318688 GGATGATGTTATGAAGACTCAGGCTTAAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 451972 69 - 1517660 GGATGATGTTACGAAGACTCAGGCTTGAGACTCAGATTAAATATGTGTTG-AAAAAATAAAACAAATCAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547798 69 + 6513552 GGATGATGCTATGAAGACTCAGGCTTAAGACTCAGATTAAATATGTATTG-AAAAAATAAAACAAATCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319419 70 + 117903854 GGATGATTTAATGAAGACTCAGACTTAAGACTCAGATTAAATACGTCCTGAAAAAAATAAAACAAATCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506576 65 - 31320352 GGATGATTTAATGAAGACTCAGGCTTAAGACTCAGATTAAATATGTCTTGAAAAAAAT-----AAATCAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708592 65 + 2203405 GGATGATTTAATGAAGACTCAGGCTTAAGACTCAGATTAAATATGTCTTGAAAAAAAT-----AAATCAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656200 70 - 14941987 GGATGATTTAATGAAGACTCAGGCTTAAGACTCAGATTAAATATGTCTTGAAAAAAATAAAACAAATCAA i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1306760 223 - 1406956 I e dasNov3.JH575754 536676 2003 - 2150887 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=23008.000000 s hg38.chr18_GL383571v1_alt 185328 2 + 198278 CC s panTro5.chr18 65095369 2 + 78221452 CC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214273 2 + 77229886 CC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433801 2 + 17472758 CC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474915 2 - 152096393 CC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424190 2 + 70235451 CC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115520 2 - 75711847 CC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674845 2 - 18804593 CC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286675 2 + 18905526 CC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115811 2 - 72318688 CT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452041 2 - 1517660 CC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547867 2 + 6513552 CC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319489 2 + 117903854 CC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506641 2 - 31320352 CC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708657 2 + 2203405 TC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656270 2 - 14941987 CC i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 538679 2 - 2150887 cc i dasNov3.JH575754 I 2003 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1306760 223 - 1406956 I e canFam3.chr1 112357603 2814 - 122678785 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=2631681.000000 s hg38.chr18_GL383571v1_alt 185330 276 + 198278 CAGAAACAGAC-----------CTGTAG---------TGAAACAAAGGTATGGTA------TTTTGCATAAGTTAAAT--------TGTTTTCACTATCAGTGTTCTAGAAATTCTTTTTCTGCCTTTA-AGATGGAGATTAATGTTGAAG-----------AGAAAAAGATTTTCCTGGATAGAGAC-TTTTAAGAGGCCCAAGACACTTATGGAGTCCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCATTTGTGTGGTAAAGAGCCATCCGTAGTACAGT-----GAGGGCATATATTCAAG---AAAAATTTAAGAAAGGTGATTTC s panTro5.chr18 65095371 276 + 78221452 CAGAAACAGAC-----------CTGTAG---------TGAAACAAAGGTATGGTA------TTTTGCATAAGTTAAAT--------TGTTTTCACTATCAGTGTTCTAGAAATTCTTTTTCTGCCTTTA-AGATGGAGATTAATGTTGAAG-----------AGAAAAAGATTTTCCTGGATAGAGAC-TTTTAAGAGGCCCAAGACACTTATGGAGTCCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCATTTGTGTGGTAAAGAGCCATCCGTAGTACAGT-----GAGGGCATATATTCAAG---AAAAATTTAAGAAAGGTGATTTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214275 276 + 77229886 CAGAAACAGAC-----------CTGTAG---------TGAAACAAAGGTATGGTA------TTTTGCATAAGTTAAAT--------TGTTTTCACTATCAGTGTTCTAGAAATTCTTTTTCTGCCTTTA-AGATGGAGATTAATGTTGAAG-----------AGAAAAAGATTTTCCTGGATAGAGAC-TTTTAAGAGGCCCAAGACACTTATGGAGTCCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCATTTGTGTGGTAAAGAGCCATCCGTAGTACAGT-----GAGGGCATATATTCAAG---AAAAATTTAAGAAAGGTGATTTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5433803 276 + 17472758 CAGAAACAGAC-----------CTGTAG---------TGAAACAAAGGTATGGTA------TTTTGCATAAGTTAAAT--------TGTTTTcactatcagtgttctagaaattcttttcctgccttta-ggatggagaTTAATGTTGAAG-----------AGAAAAAGATTTTCCTGGATAGAGAC-TTTTAAGAGGCCCAAGACACTTATGGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCATTTGTGTGGTAAAGAGCCATCCGTAGTACAGT-----GAGGGCATATATTCAAG---AAAAATTTAAGAAAGCTGATTTC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139474917 276 - 152096393 TAGAAACAGGC-----------CTGCAG---------TGAAACAAAGGTATGCTA------TTTTGCATAAGTTAAAT--------TGTTTTcactatcagtgttctagaaattctttttctgccttta-ggatggagaTTAATGTTAAAG-----------AGAAAAAGGTTTTCCTCGATAGAGAC-TTTTAAGAGGCCCAAGACACTTATGGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCATTTGTGTGGTAAAGAGCCATCCGTAGTACAGT-----GGGGGCATATATTCAAG---AAAAATTTAAGAAAGGTGATTTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424192 275 + 70235451 CAGAAACACA------------CTGCAG---------TGAAACAAAGGTGTGCTA------TTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGAGATTAATGTTGAAG-----------AGAAAAAGATTTGCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTCATAGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCTTTTGTGTGGTAAAGAGCCATCCGTGGTACAGT-----AGGGGCATATATTCAAG---AAAAACTTAAGAACGGTGATTTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115522 275 - 75711847 CAGAAACACA------------CTGCAG---------TGAAACAAAGGTGTGCTA------TTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGAGATTAATGTTGAAG-----------AGAAAAAGATTTGCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTCATAGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCTTTTGTGTGGTAAAGAGCCATCCGTGGTACAGT-----AGGGGCATATATTCAAG---AAAAACTTAAGAACGGTGATTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13674847 275 - 18804593 CAGAAACACA------------CTGCAG---------TGAAACAAAGGTGTGCTA------TTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGAGACTAATGTTGAAG-----------AGAAAAAGATTTGCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTCATAGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCTTTTGTGTGGTAAAGAGCCATCCGTGGTACAGT-----AGGGGCATATATTCAAG---AAAAACTTAAGAACGGTGATTTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286677 275 + 18905526 CAGAAACACA------------CTGCAG---------TGAAACAAAGGTGTGCTA------TTTTGTGTAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGAGATTAATGTTGAAG-----------AGAAAAAGATTTGCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTCATAGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCTTTCGTGTGGTAAAGAGCCATCCGTGGTACAGT-----GGGGACATATATTCAAG---AAAAACTTAAGAACGGTGATTTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60115813 276 - 72318688 GAGAAACACAC-----------CTGCAG---------TGAAACAAAGGTATGCTA------TTTTGTATAAGTTAAAT--------GGTCTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGGGATTAATGTTGAAG-----------AGAAAAAGATTTGCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACAGTCACAGAGCGCTAGAATTCTAGAGTTCTTAGTGGTAAGGTCTTTTGTGTGGTAAGGAGCCATCCGTGGTACAGC-----GGGGGCATATATTCAAG---AAAAACTTAAGAATGGTGATTTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452043 275 - 1517660 CAGAAACACA------------CTGCAG---------TGAAACAAAGGTGTGCTA------TTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGAGATTAATGTTGAAG-----------AGAAAAAGATGTGCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTCATAGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCTTTCGTGTGGTAAAGAGCCATCCGTGGTACAGT-----GGGGACATACATTCCAG---AAAAACTTAAGAACGGTGATTTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3547869 276 + 6513552 CAGAAACACAC-----------CTGCAG---------TGAAACAAAGGTGTGCTA------TTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTATTTTTCTGCCTTTA-GGGTGGAGATTAATGTTGAAG-----------AGAAAAAGATTTGCCTGGATAGAGACTTTTTAGGAGGCCCAAGACACTC-TAGAGTGCTAGAATTCTAGAGTCCTTAGTGGTAAGGTCTTTTGTGTGGTAAAGAGCCATCCGTGGTACAGT-----GGGGGCACATATTCAAG---AAAAACTTAAAAACAGTGATTTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319491 276 + 117903854 CAGAAACACAC-----------CTGTAG---------TGAAATGAGGGTGTACTACCATCTTTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGGAATTCCTTTTCTGCCTTTAGGGGTGGAGGTTAATGTAGAAG-----------ATAAAAAGATTTTCCTGGATAGAGAC-TTTTTGGAGGCCCAAGACACTTACAGAGTG--------CTAGAGTCTTTAGTGGCAAGGTAATTTGTGTGGTAAATTGCTATCGGTGGTACAGT----GGGGGGCATATATTCAAT---ACAAAATTAGAAAGGGTGATTTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506643 275 - 31320352 CAGAAACACAC-----------CTGTAG---------TAAAATGAGGGTGTACTACCATCTTTTTGTATAAGTTAAAT--------TGTTTTGACTATCAGTGTTCTAGGAATT-TTTTTCTGCCTTTAGGGGTGGATGTTAATGTAGAAG-----------ATAAAAAGATTTTCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTTACAGAGTG--------CTAGAGTCTTTAGTGGTAAGGTAATTTGTATGGTAAATCACTATCGGTGGTACAGT-----GGGGGCATATATTCAAT--AAAAAAATTAAGAAGGGTGATTTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708659 280 + 2203405 CAGAAACACAC-----------TTGTAG---------TGAAATGAGGGTGTACTCCCATCTTTTTGTATAAGTTAAAT--------TATTTTGACTATCAGTGTTCTAGGAATTCTTTTTTTGCCTTTAGGGGTGGAGGTTAATGTAGAAG-----------ATAAAAAGATTTTCCTAGATAGAGAC-TTTTAGGAGGCCCAAGACCCTTACAGAGTG--------CTAGAGTCTTTAGTGGTAAGGTAATTTGTCTGGTAAATCGCTATCGGTGATATGGGGTTGGGGGGGCATATGTTCAAT---AAAAACTTAAGAAGGGTGATTTC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656272 276 - 14941987 CAGAAACACAC-----------CTGTAG---------TGAAATGAGGGTATATTACCATCTTTTTGTATAAGATAAAT--------TGTTTTGACTATCAGTGTTCTAGAAATTCTTTTTCTGCCTTTAGGGGTGGAGGTTAATGTAGAAG-----------ATAAAAAGATTTTCCTGGATAGAGAC-TTTTAGGAGGCCCAAGACACTTACAGAGTG--------CTAGAGTCTTTAGTGGTAAGGTAATTTGTGTGGTAAATGGCTATCGGTGATACAGT----GGGGGGTATATATTCAAT---AAAAAATTAAGAAGGGTGATTTC i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112360417 244 - 122678785 cagaaacacac-----------tttgagaactattgCTACATTCAGGATGCTGGA------CTTTGAATGATTTTAAT--------C-------CTGTTAATACTTTAGATATT-TCTCTCTGGCTTCA-GGATGGAGATCAGTATGAATG-----------AGAAAAAGAATGTACTGAACAGGGAA-TTTTAGGAGGCCCAAGACACATAAGGAGAG--------CTAGTATCTT--GTCGTGAGG----------AGTGAGGAG---------------------GACAGCATATATTCAATAAAAAAAAATTAAGATGTGAGATTCT i canFam3.chr1 I 2814 C 0 s dasNov3.JH575754 538681 260 - 2150887 caggaacacactttgtgagttactgTCA---------T-AAACAGGGATGGGAGA------CTTTGAATGATTTTAAGCCCTCTAATGTTTTATCTCTC-----TCT-----CTCTCTCTCTGGCTTTC-CATTGAATATCAATGTGGAAGGCAAAAAAAAAAAAAAAAGATTGCCCTGGATTGCAAA-TTACAGGAGTCCCAAGGCACATATGGAGAGTTAGCATCTT---GTCCTTAGTGGTGAAG--------------------------------AGA-----TAGAGGATGTATTCACC---AAATATTTAAGAAGGCAGGATTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1306760 223 - 1406956 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=1818105.000000 s hg38.chr18_GL383571v1_alt 185606 159 + 198278 -TTCCCAGGGAGAAAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACAGGTCATGAATATTCGGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAATTTGGTGATAGTATATGAAAAGG----T s panTro5.chr18 65095647 159 + 78221452 -TTCCCAGGGAGAAAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACAGGTCATGAATATTCAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAATTTGGTGATAGTATATGAAAAGG----T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214551 159 + 77229886 -TTCCCAGGGAGAAAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACAGGTCATGAATATTCAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAATTTGGTGATAGTATATGAAAAGG----T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434079 159 + 17472758 -TTCCCAGGGAGAAAAATGGTGCAAGTCAAAATTCTAGAATTCTCACAAAGATAACAAAGCA-ACAGGTCATGAATATTCAGTGAAGAAAGTAATTTTAGAGGAAGATCTGATTTCTGAG-GAAAAATAAAAATTTAATTTGGTGATAGTATATGAAAAGG----T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475193 159 - 152096393 -TTCCCAGGGAGAAAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACAGGTCATGAATATTCAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAATTTGGTGATAGTATATGAAAAGC----T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424467 159 + 70235451 -TTCCCAGGGAGAGAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACGGATCATGACTATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAGTTTGCTGATAATATATGAAAAGG----T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115797 159 - 75711847 -TTCCCAGGGAGAGAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACGGATCATGACTATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAGTTTGCTGATAATATATGAAAAGG----T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675122 159 - 18804593 -TTCCCAGGGAGAGAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACGGATCATGACTATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAGTTTGCTGATAATATATGAAAAGG----T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13286952 159 + 18905526 -TTCCCAGGGAGAGAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACGGATCATAACTATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAGTGTGCTGATAATATATGAAAAGG----T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116089 163 - 72318688 -TTCCCAGGGAGAGAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACGGATCATGAATATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTGGTTTGCTGATAATATATGAAAAGGTTGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452318 159 - 1517660 -TTCCCAGGGAGAGAAATGGTGCAAGTCAAAATTCTAGAATTCTGACAAAGATAACAAAGCA-ACGGCTCATGACTATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAGTTTGCTGATAATATATGAAAAGG----T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548145 157 + 6513552 -TTCCCAGGGAGAGAAATCCTGCAAGTCAAAATTCTAGAAT--CAACAGAGATAACAAAGCA-ACAGATCATGAATATTAAGTGAAGAAAGTAATTTTAGAGGAAGAGCTGATTTCTGAG-GAAAAATAAAAATTTAGTTTGCTGATAATATATGAAAAGG----T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319767 153 + 117903854 -TTCCCAGGGAGAAGAATGATGCGGGTCAAAATCCTAGAGTTCTGACAAAGATAA-----CA-ACAGGTCATGAATATTAAATGAAGAAAGAAATTTTAGAGAAAGAACTGATTTCCGGG-GAGAAATAAAAGTTTAGTTTGGTGATAATATA-TAAAGAA----A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19506918 151 - 31320352 -TTCCCAGGGAGAAGAATAATGCAGGTCAAAATCCTAGAATTCTGACAAAGATAA-----CA-ACAGGTCATGAATATTAAGTGAAGAAAGTAATTTTAGAGAAACAACTGATTTCTGAG-GAAAAATAAAAGTTTAGTT---TGATAATATAGGAAAAAA----A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1708939 154 + 2203405 -TTCCCAGGGAGAAGAATGATGCAGGTCAAAATCCTAGAATTCTGACAAAGATAA-----CA-ACAGGTCATGAATATTAAGTGAAGAAAGTAATTTTAGAGAAAGAACTGATTTCTGAG-GAAAAATAAAAGTTTAGTTTGGTGGTAATATGGGAAAAAA----A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656548 150 - 14941987 -TTCCCAGGGAGAAGAATGATGCAGGTCTAAATCCTAGAATTCTGACAAAGAT--------A-ACAGGTCATGAATATTAAGTGAAGAAAGTAATTTTAGAGAAAGAACTGATTTCTGAG-GAAAAACAAAAGTTTAGTTTGATGATAATATA-TGAAAAA----A i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1306983 161 - 1406956 -TTCCCAGGGAGAGTGATGATGCAAATTGAAATCCTAGGATTCTGACAAAGATAACAAGGCAGAAAGGTCATGCATACTAAATGAGGAATGTAATTTTAGAGGAAGAGCTGATTTCTGAGAAAAAAATACAATTTTAGTTTGGTGATAATATATGAAAAGG----T i proCoq1.NW_012148742v1 I 223 I 127 s canFam3.chr1 112360661 152 - 122678785 -CCCTCAGGGAAAGGGATGATACAAATCAAAATCTGAGGACTCCGACAAAGATATGAAGGCA-AAACATT-TGCATACTAAGTGAAAAATTTAATGATAGAGGAAGAGTTGGTTTCTGGG-AAATAATAAAACTTC-----GGTGATAACA-GTGAAAAGA----T i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 538941 145 - 2150887 TTCCACAGGAAGAGGGATGATGCAAAGCAAACTATTAGGCTTCTGAGAAAGATAACAGAGCA-AAAGGTCAAGTTTACTAAGTGAAAAAAGAAATTTAAAAGGAAGTG-TGGTTTCTG-G-GAAAATCAAAAGTTCACTTTGG-----------GAGAAG------ i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=1254778.000000 s hg38.chr18_GL383571v1_alt 185765 130 + 198278 TGATTATATAGATGAAAA-CATGT-AAATTAATATACTTT-------TTCAATTTCAA-AAAGTGTATAAATTATCTAGATTGGGTGCTTATATTTAGGGGAAAGGAATAATATATACTGCC----TATTTATTTATTTATTTT s panTro5.chr18 65095806 130 + 78221452 TGATTATATAGATGAAAA-CATGT-AAATTAATATACTTT-------TTCAATTTCAA-AAAGTGTATAAATTATCTAGATTGGGTGCTTATATTTAGGGGAAAGGAATAATACATACTGCC----TATTTATTTATTTATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214710 130 + 77229886 TGATTATATAGATGAAAA-CATGT-AAATTAATATACTTT-------TTCAATTTCAA-AAAGTGTATAAATTATCTAGATTGGGTGCTTATATTTAGGGGAAAGGAATAATACATACTGCC----TATTTATTTATTTATTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434238 130 + 17472758 TGATTATATAGATGAAAA-CATGT-AAATTAATATACTTT-------TTCAATTTCAA-AAAGTGTATAAAGTATCTAGATTGGGTGCTTATATTTAGGGGAAAGGAATAATACATACTGCC----TATTTATTTATTTATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475352 127 - 152096393 TGATTATATAGATGAAA---ATGT-AAATTAATATACTTT-------TTCAATTTCAA-AAAGTGTATAGAGTATCTAGATTGGG-GCTTATATTTAGGGGAAAGGAATAATCCATACTGCC----TATTTATTTATTTATTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424626 130 + 70235451 TGATTATATAGATGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTATAAAGTATCTAGATTGGGTGCTTATATTCAGAGGAAAGAAATAATCCATGCTGCC----TATTTATTTATTTATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63115956 130 - 75711847 TGATTATATAGATGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTATAAAGTATCTAGATTGGGTGCTTATATTCAGAGGAAAGAAATAATCCATGCTGCC----TATTTATTTATTTATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675281 130 - 18804593 TGATTATATAGATGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTATAAAGTATCTAGATTGGGTGCTTATATTCAGAGGAAAGAAATAATCCATGCTGCC----TATTTATTTATTTATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287111 130 + 18905526 TGATTATATAGATGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTATAAAGTATCTAGATTGGGTGCTTATATTCAGAGGAAAGAAATAATCCATGCTGCC----TATTTATTTATTTATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116252 130 - 72318688 TGATTATATAGATGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTATAAAGTATCTAGATTGGGTGCTTATATTTAGAGGAAAGAAATAATCCATACTGCC----TATTTATTTATTTATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452477 130 - 1517660 TGATTATATAGATGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTATAAAGTATCCAGATTGGGTGCTTATATTCAGAGGAAAGAAATAATCCATGCTGCC----TATTTATTTATTTATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548302 130 + 6513552 TGATTATATAGAGGAAAA-CATGT-AAATTAAAATACTTT-------TTCAATTTTAA-AAAGTGTACAATGTATCTAGATTGGGTGCTTATATTTAGAGGAAAGAAATAATCTATACGACC----TATTTATTTATTTATCTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105319920 125 + 117903854 TGATTATACAGATGAAAA-CATAT-TCATTAAAATAC-GT-------TTCAATTTCAA-GAAGTGTATGAAGGATCCAGATTGGATGCTTATATTTAGGGGAAAG----AATCCATGCTGCC----TATTTATTTATTTATTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507069 126 - 31320352 TGATTATACAGATGAATA-CATGT-TAATTAAAATACTGT-------TTCTATTTCAA-GAAGTGTATAAAGGATCCAGATTGGATGCTTATATTTAGGGGAAAT----AATCCATACTGCC----TATTTATTTATTTATTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709093 130 + 2203405 TGATTATACAGATGAATA-CATGT-TAATTAAAATACTTT-------TTCAATTTTAA-GAAGTGTATAAAGGATCCAGATTGGATACTTATATTTAGGGGAAAG----AATCCATACTGCCtatttatttatttatttatttT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656698 126 - 14941987 TGATTATACAGATGAAAA-CATAT-TAATTAAAATACTTT-------TTCAATTTCAA-GAAGTGTATAAAGGATCCAGATTGGATGCTTATATTTAGGTGAAAG----AATCGATACTGCC----TATTTATTTATTTATTTT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112360813 125 - 122678785 TATATATATACATATATACCGTGC-TCATTCTAATATTTC-------TGTAACTTCAA-AGAATGAATAAACTATCTAGATTTACTGTCTATATTTATAAGAAAAAAGCACTA-ATACTCTT----TATTT-----TTTACTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 539086 103 - 2150887 ---------------AGA-TATCTGAAATTAACATATTTCTAAAAAATGTAATTCCAACAAACTGTA---ACTATGTAGGTTTGATTTCTGTATTTTGGGAGAA----------------------TATACATTTTTTTACTTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111878924 349 + 195471971 I e proCoq1.NW_012148742v1 1307144 127 - 1406956 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=35166.000000 s hg38.chr18_GL383571v1_alt 185895 3 + 198278 GG--A s panTro5.chr18 65095936 3 + 78221452 GG--A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214840 3 + 77229886 GG--A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434368 3 + 17472758 GG--A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475479 3 - 152096393 GG--A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424756 3 + 70235451 GG--A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63116086 3 - 75711847 GG--A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675411 3 - 18804593 GG--A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287241 3 + 18905526 GG--A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116382 3 - 72318688 GG--A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452607 3 - 1517660 GG--A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548432 3 + 6513552 GG--A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105320045 3 + 117903854 GG--A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507195 3 - 31320352 GG--A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709223 5 + 2203405 GGAAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656824 3 - 14941987 GG--A i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111879273 3 + 195471971 GA--A i mm10.chr1 I 349 C 0 s canFam3.chr1 112360938 3 - 122678785 GA--A i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 539189 3 - 2150887 GA--A i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1307144 127 - 1406956 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=111964.000000 s hg38.chr18_GL383571v1_alt 185898 14 + 198278 AAAAAA---TCAGTGAG s panTro5.chr18 65095939 14 + 78221452 AAAAAA---TCAGTGAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214843 14 + 77229886 AAAAAA---TCAGTGAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434371 14 + 17472758 AAAAAA---TCAGTGAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475482 14 - 152096393 AAAAAA---TCAGTGAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424759 15 + 70235451 AAAAAAA--TCAGTGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63116089 15 - 75711847 AAAAAAA--TCAGTGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675414 15 - 18804593 AAAAAAA--TCAGTGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287244 15 + 18905526 AGAAAAA--TCAGTGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116385 15 - 72318688 AAAAAAA--ACAGTGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452610 15 - 1517660 AAAAAAT--TCAGTGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548435 14 + 6513552 AAAAAA---TCAGTGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105320048 16 + 117903854 AAAAATA-GTCAGTGAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507198 16 - 31320352 AAAAATA-ATCAGTGAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709228 16 + 2203405 AAAAAAA-ATCAGTGAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656827 16 - 14941987 TAAAATA-ATCAGTGAG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307271 14 - 1406956 AAAAAA---TCAGTTAG i proCoq1.NW_012148742v1 I 127 C 0 s mm10.chr1 111879276 14 + 195471971 AAAATA---GCAGTTAG i mm10.chr1 C 0 C 0 s canFam3.chr1 112360941 16 - 122678785 AAAAGTATATTTTTGA- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 539192 14 - 2150887 GAAAAA---TCAGTAAG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e otoGar3.GL873546 11279604 0 - 20685099 C a score=881672.000000 s hg38.chr18_GL383571v1_alt 185912 69 + 198278 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGG-------------TAAAATATATTATTGAGGAAAAATAG-CA s panTro5.chr18 65095953 69 + 78221452 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGG-------------TAAAATATATTATTGAGGAAAAATAG-CA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214857 69 + 77229886 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGG-------------TAAAATATATTATTGAGGAAAAATAG-CA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434385 69 + 17472758 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGG-------------TAAAATATATTATTGAGGAAAAATAG-CA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475496 69 - 152096393 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGA-------------TAAAATATATTATTGAGGAAAAATAG-CA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424774 69 + 70235451 CATTTTGGGTATGTTTGTGTGTATCA-GATAATCAAATCAGA-------------TAAAATATATTATTGATGAAAAACAG-TA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63116104 69 - 75711847 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATCAAATCAGA-------------TAAAATATATTATTGATGAAAAACAG-TA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675429 69 - 18804593 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATCAAATCAGA-------------TAAAATATATTATTGATGAAAAACAG-TA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287259 69 + 18905526 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATCAAATCAGA-------------TAAAATATATTATTGACGAAAAACAG-TA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116400 69 - 72318688 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATCAAATCAGA-------------TAAAATGTACTATTGACGAAAAATAG-TA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452625 69 - 1517660 CATTTTGGGTGTGTTTGTGTGTATCA-GATAACCAAATCAGA-------------TAAAATATATTATTGACGAAAAACAG-TA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548449 69 + 6513552 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATCAAATCGGA-------------TAAAATACATTATTGATGAAAAATAG-TA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105320064 67 + 117903854 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGA-------------TAAAATA---TATTGAGGAAAAAAAGCTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507214 62 - 31320352 CATTTTGGGTGTGTT----TGTATCA-GATAATTAAATCAGA-------------TAAAATA---TATTGAGGAAAAATAG-TA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709244 66 + 2203405 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGA-------------TAAAATA---TTTTGAGGAAAAATAG-TA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656843 66 - 14941987 CATTTTGGGTGTGTTTGTGTGTATCA-GATAATTAAATCAGA-------------TAAAATA---TATTGAGGAAAAATAG-TA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307285 69 - 1406956 CATTTTTGGTGTGTTTGTGTTTATAA-GATAATTAAATCAGA-------------TAAAATATGTTATTTTGGAAAAATAG-TA i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11279604 44 - 20685099 CATTTTGGGTGTGCTTGCATGTATGACGATAATT---TCAGT-------------TAAAA------------------------ i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111879290 68 + 195471971 CATTTTGAATATATTTATATGCATTA-GATCATTAAATCAAA-------------GCAAATAAAATCTTGAAGCTAAAT-G-TA i mm10.chr1 C 0 C 0 s canFam3.chr1 112360957 61 - 122678785 CATTTTGAGCATGTTTGTA------A-GATAATAAAAATAGA-------------TAAAATGCATTCTTGAAGAGGAT--G-CA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 539206 82 - 2150887 CATTTTGTGTATGTTTGTGTGCATAA-GATAATTAAATCCAATAATTAAATCCAGTAAAATATATTCCAGAGGAAAAATAG-TA i dasNov3.JH575754 C 0 I 640 e micMur3.chr19 41564803 337 + 83067054 I a score=274504.000000 s hg38.chr18_GL383571v1_alt 185981 24 + 198278 CATCATTGAGCCCAATAACCTTGT s panTro5.chr18 65096022 24 + 78221452 CATCATTGAGCCCAATAACCTTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214926 24 + 77229886 CATCATTGAGCCCAATAACCTTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434454 24 + 17472758 CATCATTGAGCCCAATAACCTTGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475565 24 - 152096393 CATCATTGAGCCCAATAACCTAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424843 24 + 70235451 CATTATTGAGCCCAGTAACCTTGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63116173 24 - 75711847 CATTATTGAGCCCAGTAACCTTGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675498 24 - 18804593 CATTATTGAGCCCAGTAACCTTGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287328 24 + 18905526 CATTATTGAGCCCAGTAACCTTGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116469 24 - 72318688 CATTATTGAGCCCAGTAACCTTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452694 24 - 1517660 CATTACTGAGCCCAGTAACCTTGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548518 24 + 6513552 CATTATTGAGCCCAGTAACCTTGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105320131 24 + 117903854 CATTATTGAGCTCAATAACCCTGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507276 24 - 31320352 CATTACTGAGCTCAATACCCCTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709310 24 + 2203405 CATTATTGAGCTCAATAACCCTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656909 24 - 14941987 CATTATTGAGCTCAATAACCCTAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307354 24 - 1406956 CATTATTGAGCCCAGGAACTCTGT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11279648 14 - 20685099 ---TATTGAGCCCAGGA------- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111879358 20 + 195471971 CATTA-TGAACTGAGTATTCC--- i mm10.chr1 C 0 C 0 s canFam3.chr1 112361018 24 - 122678785 CTTTATTGAACCCAGGAACTCTGT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e dasNov3.JH575754 539288 640 - 2150887 I a score=3888958.000000 s hg38.chr18_GL383571v1_alt 186005 292 + 198278 TAAACTCTGATGTAGAAGTCTGGGAG-AAAAAAAGCATAGGTTAA--GAGGCAGATTTAATACTATTGGTGTGTGTTTTTATGTACATAAATGATAACTTCCCGACAATTCCTCAAATGTAGGTCTAATGGGTGTGATAAA-GCGGGGGGGTAGATATTGCTGAAAGCTACTTTGGTCCTTTGGTTTACTCTGTTATTGGACCACTCCTATTTTACCTGTTTCGTACAAAATGTAT---CAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCCTGTGGACATTGT-CAGAAAGAAATGAA s panTro5.chr18 65096046 290 + 78221452 TAAACTCTGATGTCGAAGTctgggag-aaaaaaagcataggttaa--gaggcagatttaatactattggtgtgtgtttttatgtacataaatgataactTCCTGACAATTCCTCAAAAGTAGGTCTAATGGGTGTGATAAA-GCGGGGAGGTAGATATTGCTGAAAGCTACTTTGGT--TTTGGTTTACTCTGTTATTGGACCACTCCTATTTTACTTGTTTCGTACAAAATGTAT---CAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCCTGTGGACATTGT-CAGAAAGAAATGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64214950 292 + 77229886 TAAACTCTGATGTCGAAGTctgggag-aaaaaaagcataggttaa--gaggcagatttaatactattggtgtgtgtttttatgtacataaatgataactTCCCGACAATTCCTCAAAAGTAGGTCTAATGGGTGTGATAAA-GCGGGGAGGTAGATATTGCTGAAAGCTACTTTGGTCCTTTGGTTTACTCTGTTATTGGACCACTCCTATTTTACTTGTTTCGTACAAAATGTAT---CAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCCTGTGGACATTGT-CAGAAAGAAATGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434478 292 + 17472758 TAAACTCTGATGTCGAAGTCTGGGAG-AAAAAAAGCATAGGTTAA--GAGGCAGATTTAATACTATTGGTGTGTGTTTTTATGTACATAAATGATAACTTCCCGACAATTCCTCAAAAGTAGGTCTAATGGGTGTGATAAA-GCGGGGAGGTAGATATTGCTGAAAGCTACTTTGGTCCTTTGGTTTACTCTGTTATTGGACCACTCCTGTTTTACTTGTTTCGTACAAAATGTAT---CAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCCTGTGGACATTGT-CAGAAAGAAATGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475589 292 - 152096393 TAAACTCTGATGTCGAAGTCTGGGAG-AAAAAAAGCATAGGTTAA--GAGGCAGATTTAATACTACTGGTGTGTGTTTTTATGTACATAAATGGTAACTTCCCGACAGTTCCTCAAAAGTAAGTCTAATGGGTGTGATAAA-GCGGGGAGGTAGATATTGCTGAAAGCTACTTTGGTCCTTTGGTTTACTCTGTTATTGGACCACTCCTATTTTACTTGTTTCGTACAAAATGTAT---CAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCCTGTGGACATTGT-CAGAAAGAAATGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57424867 292 + 70235451 TAAACTGTGATGTCGAAGTctgggaggaaaaaaagcacaggttaa--gaggcagatttagtactattggtgtgtgcttttatgtacataaatggtaacttcccagcaattcctcaaaagtaggtctaatgggtgtgataaa-gcggggaggtagaaattgctgaaagctactttggtcctttggtttgctgtgttattggaccactcctattttacttgtttcgtacaaaatgtat---caa-ggttgtgaaaaca-ttaagggtatcag-tcccctgtggaca-tgt-cagaaagaaatgaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63116197 292 - 75711847 TAAACTGTGATGTCGAAGTCTGGGAGGAAAAAAAGCACAGGTTAA--GAGGCAGATTTAGTACTATTGGTGTGTGCTTTTATGTACATAAATGGTAACTTCCCAGCAATTCCTCAAAAGTAGGTCTAATGGGTGTGATAAA-GTGGGGAGGTAGAAATTGCTGAAAGCTACTTTGGTCCTTTGGTTTGCTGTGTTATTGGACCACTCCTATTTTACTTGTTTCGTACAAAATGTAT---CAA-GGTTGTGAAAACA-TTAAGGGTATCAG-TCCCCTGTGGACA-TGT-CAGAAAGAAATGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675522 292 - 18804593 TAAACTGTGATGTCGAAGTctgggaggaaaaaaagcacaggttaa--gaggcagatttagtactattggtgtgtgcttttatgtacataaatggtaacttcccagcaattcctcaaaagtaggtctaatgggtgtgataaa-gcggggaggtagaaattgctgaaagctactttggtcctttggtttgctgtgttattggaccactcctattttacttgtttcgtacaaaatgtat---caa-ggttgtgaaaaca-ttaagggtatcag-tcccctgtggaca-tgt-cagaaagaaatgaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287352 292 + 18905526 TAAACTGTGATGTCGAAGTctgggaggaaaaaaagcacaggttaa--gaggcagatttagtactattggtgtgtgcttttatgtccataaatggtaacttcccagcaattcctcaaaagtaggtctaatggatgtgataaa-gcggggaggtagaaattgctgaaagctactttggtcctttggtttgctgtgttattggaccactcctattttactcgtttcgtacaaaatgtat---caa-ggttgtgaaaaca-ttaagggtatcag-tcccctgtggaca-cgt-cagaaagaaatgaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60116493 293 - 72318688 TAAACTCTGATGTCGAAGTCCGGGAGAAAAAAAAGCATAGGTTAA--GAGGCAGATTTAGTACTATTGGTGTGTGCTTTTATGTACATAAATGGTAACTTCCCAGCAATTCCTCAAAAGTAGGTCTAATGGGTGTGATAAA-GCGGGGAGGTAGATATTGCTGAAAGCTACTTTGGTCCTTTGGTTTGCTGTGTTATTGGACCACTCCTATTTTACTTGTTTCGTACAAAATGTAG---CAA-GGTTGTGAAAACA-TTAAGGGTATCAG-TCCCCTGTGGACATTGT-CAGAAAGAAATGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 452718 292 - 1517660 TAAACTGTGATGTCGAAGTctgggaggaaataaagcacaggttaa--gaggcagatttagtactattggtgtgtgtttttatgtccataaatggtaacttcccagcaattcctcaaaagtaggtctaatgggtgtgataaa-gcggggaggtagaaattgctgaaagctactttggtcctttggtttgctgtgttattggaccactcctattttactcgtttcgtacaaaatgtat---caa-ggttgtgaaaaca-ttaagggtatcag-tcccctgtggaca-tgt-cagaaagaaatgaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548542 294 + 6513552 TAAACTGTGATGTCGAAGTctgggagaaaaaaaagcataggttaa--gaggcagatttagtactattggtgtgtgcttttatgttcataaatggtaacttcccagcaattcctcAGAAGTAGGTCTAATGGGTGTGATAAA-GCGGGGAGGTAGGTATTGCTGAAAGCTACTTTGGTCCTTTGGTTTACTGTGTTATTAGACCACTCCTATTTTACTTGTTTCGTACAAAATGTAT---CAAGGGTTGTGAAACCA-TTAAGGGTATCAG-TCCCCTGTGAACATTGT-CAGAAAGAAATGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105320155 292 + 117903854 TAAACTCTGATGTCTAAGTGTGGTAG-AAAAGCAGCATGGATTAA--GAGGCAGATTTAGTACTATTGGTGTGTGCTTTTATGTACGTAAGTGGTAACTTCCCGGCAATTCCTCAAAAGTAGGTCTAAGGGGTGTGATAGA-GCCGGGAGGGAGATATTGCTGAGAGCTACTTTGGGCCTTTGATTTACTCTGTTATTGGAACACTCCTACTTTACCTGTTTTGTACAAAGTGTAT---TAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCTCTTGTGGACATTGT-CAGAAAGAAATGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507300 292 - 31320352 TAAACTCTGATGTTGAAGTCTGGCAG-AAAAACAGCATGGGTTAA--GAAGCAGATTTAGTACTAGTGGTGTGTGCTTTTATGTACATAAGTGGTAACTTCTAGGCAATTCCTCAAAAGTAGGTCTAAGGGGTGTGATAGA-GCCGGGAGGAAGATATTGCTGAGAGCTACTTTGGTCCTTTGATTTACTCTCTTATTGGAACACTCCTACTTTACCTGTTTTGTACAAAGTGTAT---CAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCTTGTGAACATTGT-CAGAAAGAAATGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709334 292 + 2203405 TAAACTCTGATGTCGAAGTCTGGTAG-AAAAACACCATGGGTTaa--gaggcagatttagtactattagtgtgtgcttttatgtacataagtggtaacttcccggcaattcctcAAAAGGAGGTCTAAGGGGTGTGATAGA-GCTGGGAGGGAGATATTGCTGAGATCTACTTTGGTCCTTTGATTTACTCTGTTATTGGAACACTCCTACTTTACCTGTTTTGTACAAAGCGTAT---TAA-GGCTGTGGAAACA-TTAAGGGTATCAG-TCCCTTGTGGAAATTGT-CAGAAAGAAATGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3656933 291 - 14941987 TAAACTCTGATGTCGAAGTCTGGTAG-AAAAATAGCATGAATTAA--GAGGCAGATTTAGTACTATTGGTGTGTGCTTTTATGTGCATAAGTGGTAACTTCCCGGCAATTCCTCAAAAGTAGATCTAAGGGGTGTGATAGA-GCTGGGAGGGAGATATTGCTG-GAGCTACTTTGGTCCTTTGACTTACTCTGTTATTGGAACACTCCTACTTTACCTGTTTTGTACAAAGTGTAT---CAA-GGCTGTGGAAACA-TTAAGGATATCAG-TCCCTTGTGGACATTGT-CAGAAAGAAAAAAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307378 290 - 1406956 TAgacactgatatggaagtctgggagacaaaaaagcacagggtaa--gaggcagatttaaaactattggtgtgtgattttatgtacataaatggtaacatccctgtgattcctcaaatgtaggtccaaagggtgcaataaa-agggggagatagatattgctgaaaggtactttggt-tttttgtgtacttagttagtagaccgctcctattttacttgtttcttacaaaatgcat---ca--ggctatggaaaca-ttaagagtagcag-tcccctgtggacagtg--cagaaaaaaatgaa i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11279662 287 - 20685099 -----ACTGATGTGGAAGTCTGAGTGACAAAAATGCACGGGGTCA--CAGGCAGATGGAAAAGTATCGGTATGCGATTTTATGTACTTAAATGGTACCTTCCCTGTGAGCCCTCAGAAGTACGTCCAAAGGGTGCAGTAAA-AGGGGGAGATAGATGTTGCTGAAAGGAACTTTGGTGGTTTTGTGTACTCAATTAGTAGACTGCTCTTATCTTTCTTGTTTCCTACAAAATACAT---CA--GGTTGTGGAAACATTTAAGAGTAACAT-TCCCCTGAGGAGAATG--TAGGAAAAAATGAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111879378 263 + 195471971 ---------ATGAGGTTGCCTAGAAGACAAAACATTGAAAGAAAA--GAGGTATACTTA---------GTGTATA---TTATGTATCTATA--------TCCTGACAATTATTCAATAGTATGTCTAAGCGGAATGAAAAT-AGGGAAAGAGGGATATTGCCAAAGTCTTTTT----CATCTGTTTGACTGTGTCAGCACACTGCACGTATGTCATGATTTGCCTACTAAATAAATATATAG-GTTTGGGGAAAAT-TTCAGGGTGTTGG-TCCTGTTTGGACAGTAT-TAAAAAGAAAAAAA i mm10.chr1 C 0 I 1676 s canFam3.chr1 112361042 294 - 122678785 GGAACCCCAAGGTAGAAGTCTGGGGG-ACAAAAAGCACATGATAAGGGAGACTGATTTGATCCAGTTGGTCTGTGGATTTATGTCCATCAGTGCTAGCTTCCTGGCAACTCCCCCAAAGTGGATCTAAGCAGTATGGTAAAGGCTGGGAGACAAATACTGCCAAAAGCTGCTTCGGTTCTTTTATTTACTCAGTTATTGGGCAGCCGCTCTGTTACTTGTTCCCTACAAAATGCAT---CAA--GCTGTGGAAACA-CGGAGGGCATCGT-TCCCCTGTTGACATTGG-CAAAAAGAAAGATT i canFam3.chr1 C 0 I 6 s dasNov3.JH575754 539928 289 - 2150887 TGAAGCCTGTTTTGGAAGTGTGGGAG--ACAAAACCAGAGGGTAG--GAGGCAGATTTAGTATTGTTGATATGCGATTTTATGTACATAAATGGAAACTTCCAGGCAATTCCTCAAAAGCAGGTCTAAAGTATGC-ATGAA-AGGGAGAGATGGATATTGCC-AGAGCTGCTTTGGCTCTTTTGTTTACTCAGGTATTGGACTGC-CCTTTGTTACTGTTCCCCAGTACAGTGTAT---TAA--GTTGGGGAAACA-TCGGGGACATCAGCCCCCCCGTGGACATTTTGCAGGAAGAAATGAA i dasNov3.JH575754 I 640 C 0 e micMur3.chr19 41564803 337 + 83067054 I a score=2251513.000000 s hg38.chr18_GL383571v1_alt 186297 219 + 198278 -CAGTAA----------------------tc--------------------------------------------------------tctctctctctctcttt--------------------------------cctctctG---CCTATATTGTGATAAAGAAATATGAGA---TCATAGATTCTGAAAGA-TTTAAAAATATATA-CTTACTGTCATTGTTTATCAAAATGCGAATAAATCAGT---------CCTTAAACATGTAGTCTTTAACAAATTTAATATGCAT-ATCAGT-GCTGAGTAGATTGCTAGGGTGGAGTA-ACTCCAAACATC---------------------ATGTGCC------------tg s panTro5.chr18 65096336 225 + 78221452 -CAGTAA----------------------tc--------------------------------------------------------tctctctctctctcttt--------------------------------cctctctG---CCTATATTGTGATAAGGAAATATGAGA---TCATAGATTCTGAAAGA-TTTAAAAATATATA-CTTACTGTCATTGTTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATATAGTCTTTAACAAATTTAACATGCAT-ATCAGT-GCTGAGTAGATTGCTAGGGTGGAGTA-ACTCCAAACATC---------------------ATGTGCC------tgtgtgtg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64215242 231 + 77229886 -CAGTAA----------------------tc--------------------------------------------------------tctctctctctctcttt--------------------------------cctctctG---CCTATATTGTGATAAGGAAATATGAGA---TCATAGATTCTGAAAGA-TTTAAAAATATATA-CTTACTGTCATTGTTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATATAGTCTTTAACAAATTTAACATGCAT-ATCAGT-GCTGAGTAGATTGCTAGGGTGGAGTA-ACTCCAAACATC---------------------ATGTGCCtgtgtgtgtgtgtg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434770 224 + 17472758 -CAGTAA----------------------tc--------------------------------------------------------tctctccctctctcttt--------------------------------cctctctG---CCTATATTGTGATAAAGAAATATGAGA---TCATAGATTCTGAAAGA-TTTAAAAATATACA-CTT-CTGTCATTGTTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-ATCAGT-GCTGAGTAGATTGCTAGGGTGGAGTA-ACTCCAAACATC---------------------ATGTGCC------tgtgtgtg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139475881 219 - 152096393 -CAATAA----------------------tc--------------------------------------------------------tctctctctctctcttt--------------------------------cctctctc---cctATATTGTGATAAAGAAATATGAGA---TCACAGATTCTGAAAGA-TTTAAAAATCTATA-CTTACTGTCATTGTTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-ATCAGT-GCTGAGTAGATTGCTAGTGTGGAGTA-ACTCCAAACATC---------------------ATGTGCC------------TG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57425159 213 + 70235451 -cAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCC---CCTATATTGTGGTAAAGAAATATGAGG---TCATAGATTCTGAAGGA-TTCAAAAATATATA-CTTACTGTCATTGCTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-ATTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACATC---------------------ATGTGCC------------TC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63116489 213 - 75711847 -CAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCC---CCTATATTGTGGTAAAGAAATATGAGG---TCATAGATTCTGAAGGA-TTCAAAAATATATA-CTTACTGTCATTGCTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-ATTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACATC---------------------ATGTGCC------------TC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13675814 213 - 18804593 -cAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCC---CCTATATTGTGGTAAAGAAATATGAGG---TCATAGATTCTGAAGGA-TTCAAAAATATATA-CTTACTGTCATTGCTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-ATTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACATC---------------------ATGTGCC------------TC i macNem1.NW_012016688v1 C 0 I 212 s cerAty1.NW_012001075v1 13287644 213 + 18905526 -cAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCC---CCTAtattgtggtaaagaaaaatgagg---tcatagattctgaagga-ttcaaaaatacata-cttactgtcattgcttatcaaaatgctagtaaatcagt---------ccttaaacatctagtctttaacaaatttaatATGCAT-ATTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACACC---------------------ATGTGCC------------TC i cerAty1.NW_012001075v1 C 0 I 94 s chlSab2.chr18 60116786 213 - 72318688 -CAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCC---CCTATATTGTGGTAAAGAAATATGAGG---TCATAGATTCTGAAGGA-TTCAAAAATATATA-CTTACTGTCATTGCTTATCAAAATGCTAATAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-GTTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACATC---------------------ATGTGCC------------TC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 453010 213 - 1517660 -cAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCC---CCTATATTGTGGTAAAGAAATATGAGG---TCATAGATTCTGAAGGA-TTCAAAAATACATA-CTTACTGTCATTGCTTATCAAAATGCTAGTAAATCAGT---------CCTTAAACATCTAGTCTTTAACAAATTTAATATGCAT-ATTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACACC---------------------ATGTGCC------------TC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3548836 213 + 6513552 -CAGTGA----------------------TC--------------------------------------------------------TCTCCCTCTCTCT--------------------------------------TCTCCT---CCTAtattgtggtaaagaaatatgagg---tcatagattctgaagca-ttcaaaaatatata-cttactgtcattgcttatcaaaatgctaataaatcagt---------ccttaaacatctagtctttaacaaatttaatATGCAT-ATTAGT-GCTGAGTAGATGGCTAGGGTGGAGTA-ATTCCAAACATC---------------------ATGTGCC------------TC i colAng1.NW_012115433v1 C 0 I 42 s calJac3.chr13 105320447 228 + 117903854 -TAA-------------tctcactctctctc--------------------------------------------------------tctctctctctctcttt--------------------------------cttctctc---cctATAATGTGATAAAGAAATATGAGG---TTGTAGATTCCAAAGGA-TTTAAAAATATATA-CTTATTTTCGTTGTGTATAAAAATGCTAATAAATCAGT---------CCTCAAACATCTAG-AGTTAACAAATTTAATATGCAT-ACCAAT-GCTAAATAGGTTGTTAGGCTGGAGTA-ATTCCAAACATGAGCgt----------------gtgtg---------------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507592 249 - 31320352 -CCATAAtc------tctctctctctctctc--------------------------------------------------------tctctctctctctcttt--------------------------------ctcctctc---tctATAATGGGATAAAGAAATATGAGG---TTGTAGATTCTGAAGGA-TTTAAAAATATATA-CTTATTATCATTATTTATCAAAATGCTAATAAATCAGT---------CCTCAAACATCTAG-AGTTAACAAATTTAATATGCAT-ACCAAT-GCGAAATACCTTGTTAGGGTGGAGTA-ATCCCAAACgtgtgggtgcgtgtgtg--tgggggtgcg---------------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709626 270 + 2203405 -CCATAAtc------tctctctctctctctct------------ccccctccctccccccccctcccccctcccgtctctctccccttctccctctctctctct--------------------------------cttctctc---cctATAATGTGATAAAGAAATATGAGG---TCGTAGATTCTGAAGGA-TTTAAAAATA-ATA-CTTATTGTCATTGTTTATCAAAATGCTAATAAATCAGC---------CCTCAAACATCTAC-AGTTAACAAATTTAATATGCAT-GCCAAT-GCTAAGTAGGTTGTTAGGGTGGAGTA-ATTCCAAAC------------------------GTGCC---------------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3657224 232 - 14941987 -TAA-------------------------tc--------------------------------------------------------tctttctctctctcttt--------------------------------cttctctc---cctATAATGTGATAAAGAAATATGAGG---TTGTAGATTCTGAAGGA-TTTAAAAATATATA-CTTATTGTCATTGTTTATCAAAATGCTAATAAATCAGT---------CCTCAAACATCTAG-AGTTAACAAATTTAATATGCAT-ACCAAT-GCTAAATAGGTTGTTAGGGTGGAGTA-ATTCCAAACgtgtgcgtgtgtgtgtgtttgcgtgtgtg---------------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307668 210 - 1406956 -cAAT----------------------------------------------------------------------------------TCTCACTTTCTCTCTTT--------------------------------CCTCTCTC---CCTAtattgtggtaaagaaataaaagt---ttatagattctgaagga-tttacaaatatata-cttactgtcattgtttatcaaaatgctaataaatcagt---------cttcaaatatgcagtctttaaccaattaaatATGCAT-ACTAGT-GCTGAATAGATTGTTAAGGTGGAGTC-ATTCCAAATGT----------------------GCATA---------------- i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11279949 237 - 20685099 -TAATCGTTGCATTAtctctttctctcactg--------------------------------------------------------tctctctttctctattt--------------------------------cctctctc---cctctATTGTGGTAAATAAATATAAGA---TTATAAGTTGTAAAGGA-TTTAAAAATATATATTTTACTGTCATTGTTTATAAAAATGCTAATAAATCAGT---------CTTCAAACATCTGGTCTTTTACAAATTAAATAAGCAT-ACTGGT-GTTGAATAGATTGTTAGTGTAGAGTA-ATTCCAAATGT----------------------GCGTA---------------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112361342 260 - 122678785 -CAGGAA----------------------TC--------------------------------------------------------TGTTCCTCTGTCTCTCGGTGCCTTTTTCTTTCCAGGGCCTCAA------CCTCTCTCTCTCCTATTGTATGCTAAAGAAAGA-GAAG---TTATAGATTCTAAGGTG-TTTAAAAATATATT-TTTAACATCATTGATTATAAAAATGTTAACAAATTAGTTTGTGTATATCTTAAATATCTGACCTTTAA-AAATTAAATTTGCATAACTATT-GCTGCATAAATTGTTGGGGTGGAGTACATTCCAAgtgtgtgtgtgt--------------gtgtg---------------- i canFam3.chr1 I 6 C 0 s dasNov3.JH575754 540217 305 - 2150887 CCAGGAA----------------------TCTGGATTGTGATGAGGATCTGGTTAAGATGCCATCGTGCTTATAAGCACTTTTG---tctccctctctctctctctttcctattttctcatccacctccctctctttcactccc---cctATATTATGCTGAAGAAATACCAGAAATATGTATATTCTGAAGCATTTTAATAATATTTA-AGTAATGTCATTGCTTG-CGAAATGCAAATGAATCTTT-TTCCAATACCTTAAACATCAAGGCTTTAACAAATTAAATGTACGT-ACCTATGGTTGAATACATTTTGGGGGTGGAGTACATTCCAAA---------------------------------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I a score=220204.000000 s hg38.chr18_GL383571v1_alt 186516 22 + 198278 t-gtgtgtgtgtgt-gtgtgtgtg s panTro5.chr18 65096561 22 + 78221452 t-gtgtgtgtgtgt-gtgtgtgtg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64215473 22 + 77229886 t-gtgtgtgtgtgt-gtgtgtgtg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5434994 24 + 17472758 tggtgtgtgtgtgtggtgtgtgtg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476100 10 - 152096393 T--------------GTGTGTGTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57425372 22 + 70235451 T-ATATGTGTGTGT-GTGTGTCTG i rheMac8.chr18 C 0 I 162 s macFas5.chr18 63116702 22 - 75711847 T-ATATGTGTGTGT-GTGTGTCTG i macFas5.chr18 C 0 I 162 s macNem1.NW_012016688v1 13676239 22 - 18804593 T-GTGTGTCTGTGT-GTGTATATA i macNem1.NW_012016688v1 I 212 C 0 s cerAty1.NW_012001075v1 13287951 22 + 18905526 t-gtgtatgtgtgt-gtgtgtgtA i cerAty1.NW_012001075v1 I 94 C 0 s chlSab2.chr18 60116999 22 - 72318688 T-Atgtgtgtgtgt-gtgtgtgtg i chlSab2.chr18 C 0 I 46 s manLeu1.NW_012106698v1 453223 22 - 1517660 T-Atgtgtgtgtgt-gtgtgtgtg i manLeu1.NW_012106698v1 C 0 I 90 s colAng1.NW_012115433v1 3549091 22 + 6513552 t-atgtgtgtctgt-gtgtgtgtg i colAng1.NW_012115433v1 I 42 I 2 s calJac3.chr13 105320675 22 + 117903854 t-gtgtgtgtgtgt-gtgtgtgtg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507841 22 - 31320352 t-gtgtgtgtgtgt-gtgtgtgtg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709896 22 + 2203405 T-TCAGGGGTGTGT-GTGTGTGTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3657456 22 - 14941987 t-gtgtgtgtgtgt-gtgtgtgtg i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307878 22 - 1406956 T-ATGTGTCTGCAC-ATGTATGTG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11280186 22 - 20685099 T-ATGTGCGTGTGC-ATGTATGTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112361602 20 - 122678785 ---tgtgcatgtgc-gcgcatgtg i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 540522 18 - 2150887 -----TGTGTGTAT-GTGTATTTC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I a score=4304770.000000 s hg38.chr18_GL383571v1_alt 186538 323 + 198278 tgACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGAATTCTGTCTTCTGGTACATTCGTTCGCTGGATCCGCAAAACTGAGAATAAGACTCGGGACCATGGTGAAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGTTTACATAATTTAATTTTTCTAGCAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATAGAAATA-AAAATGTTTAATGTTTATTCTTAAATTTTATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACCTAGATCTTTGAGGTTCATTG s panTro5.chr18 65096583 323 + 78221452 tgACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGAATTCTGTCTTCTGGTACATTCGTTCGCTGGATCCGCAAAACTGAGAATAAGACTCGGGACCATGGTGAAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGTTTACATAATTTAATTTTTCTAGCAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATAGAAATA-AAAATGTTTAATGTTTATTCTTAAATTTTATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCATTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64215495 323 + 77229886 tgACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGAATTCTGTCTTCTGGTACATTCGTTCGCTGGATCCGCAAAACTGAGAATAAGACTCGGGACCATGGTGAAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGTTTACATAATTTAATTTTTCTAGCAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATAGAAATA-AAAATGTTTAATGTTTATTCTTAAATTTTATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCATTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435018 323 + 17472758 tgACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGAATTCTGTCTTCTGGTACATTCGTTCGCTGGATCCGCAAAACTGAGAATAAGACTGGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTGTCTTGTCTC----------TAACACAGTTTACATAATTTAATTTTTCTAGCAGAGTATTTTTTCTTGATGTGATTTCCATCGAATGTTAAAGCAGAATAGAAATA-AAAATGTTTAATGTTTATTCTTAAATTTTATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCATTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476110 319 - 152096393 TGACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGAATTCTGTCTTCTGGTACATTCGTTCGCTGGATCCACAAAACTGAGAATAAGACTGAGGACCATGGTGCAGCCAGCTGTGCTCCTCAGATAAAATTTCTATCTTGTCTCT---------TAACACAGTTTACA-----TAATTGTTCTAGCAGAATATTTTTTCTTGATGTGATTCCCACAGAATGTTAAAGCAGAATAGAAATA-AAAATGTTTAATGTTTATTCTTAAATTTTATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCATTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57425556 323 + 70235451 TGACCAAAACGATTCCTGAAAGagtgtgattcagttttcctgatttctatcttctggtacattggttcgctggatccgcaaaactgagaataagactcgggaccatggtgCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTG----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAATGTTTATTCTTAAATTACATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCGTTG i rheMac8.chr18 I 162 C 0 s macFas5.chr18 63116886 323 - 75711847 TGACCAAAACGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGATTTCTATCTTCTGGTACATTGGTTCGCTGGATCCGCAAAACTGAGAATAAGACTCGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTG----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAATGTTTATTCTTAAATTACATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCGTTG i macFas5.chr18 I 162 C 0 s macNem1.NW_012016688v1 13676261 323 - 18804593 TGACCAAAACGATTCCTGAAAGAGTGTGATTCAGTTTACCTGATTTCTGTCTTCTGGTACATTGGTTCGCTGGATCCGCAAAACTGAGAATAAGACTCGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTG----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAATGTTTATTCTTAAATTACATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCGTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13287973 323 + 18905526 TGACCAAAACGATTCCTGAAAGAGTATGATTCAGTTTTCCTGATTTCTGTCTTCTGGTACATTGGTTTGCTGGATCCTCAAAACTGAGAATAAGACTCGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAATGTTTATTCTTAAATTACATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCGTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60117067 321 - 72318688 TGACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGATTTCTGTCTTCTGGTACATTGGTTTGCTGGATCCACAAAACTGAGAATACGACTCGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAA--TTTATTCTTAAATTACATCTTCAAAATGAGTCATAACTGTTTTTGTTTACACATAGATCTTTGAGATTCATTG i chlSab2.chr18 I 46 C 0 s manLeu1.NW_012106698v1 453335 323 - 1517660 TGACCAAAACGATTCCTGAAAGAGTTTGATTCAGTTTTCCTGATTTCTGTCTTCTGGTACATTGGTTTGCTGGATCCGCAAAACTGAGAATAAGACTCGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAATGTTTATTCTTAAACTACATCTTCAAAATGAGTCATAATTGTTTTTGTTTACACATAGATCTTTGAGATTCGTTG i manLeu1.NW_012106698v1 I 90 C 0 s colAng1.NW_012115433v1 3549115 323 + 6513552 TGACCAAAAGGATTCCTGAAAGAGTGTGATTCAGTTTTCCTGATTTCTGTCTTCTGGTACATTGGTTCGCTGGATCCGCAAAACCGAGAATAAGACTCGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGCTTACATAATTTAATTTTTCTGACAGAGTATTTTTTCTTGATGTGATTTCCACAGAATGTTAAAGCAGAATGGAAATA-AAAATGTTTAATGTTTATTCTTAAATTACATCTTCAAAATGAGTCATAATTGTTTTCGTTTACATATAGATCTTTGAGATTCATTG i colAng1.NW_012115433v1 I 2 C 0 s calJac3.chr13 105320697 321 + 117903854 tgtCCAAAAGGATGCCTGAAAGAGTGTGATTCAGTTTTCCTGAATTCTGTCTTCTGATACATTGGTTCATTGGATCCGCAAAA-TGAGAACAAGACTTGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTATATCTTGTCTC----------TAACACAGTTTACATATTTTAATTTTTCTGGCAGAGCA-TTTTTCTTGATATGATTTCCACATAATGTTAAAACAGAATAGAAATG-AAACTTTTTAATATTTATTCTTAAATTATATCTTCAAAATGAGTCACAACTGTTTTTGTTTACACATAGATTTTTGAGGTTCATTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19507863 320 - 31320352 tCCCCGAAAGGATTCCTGAAAGAGTGTGATTCAATTTTCCTGAATTCTGTCTTCTGGTACATTAGTTCACTGGATCCGCAAAATTGAGAACAAGACTAGGGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATTTTGTCTC----------TAACACAGTTTACATATTTTAATTTTTCTGGAAGAGGA-TTTTTCTTGATATGATTTCCACAGAATGTTAAAACAGAATAGAAATA-AAAC--TTTAATATTTATTCTTAAATTACATCATGAAAATGAGTCATAACTGTGTTTGTTTACACATAGATTTTTGAGATTCATTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1709918 322 + 2203405 TCCCCGAAAGGATTCCTGAAAGACTGTGATTCAATTTTCCTGAATTCTGTCTTCTGGTACATTGGTTCACTGGATCCGCAAAACTGAGAACAAGACTTGGGACCGTGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGTTTACATATTTTAATTTTTCTGGAAGAGTA-TTTTTCTTGATATGATTTCCACAGAATGTTAAAACAGACTAAAAATA-AAACTGGTTAATATTTATTCTTAAATTATATCTTCAAAATGAGTCATAACTGTTTTTGTTTACACATAGATTTTTGAGATTCATTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3657478 317 - 14941987 tgtCCAAAAGGATTCCTGAAAGAGTGTGATTCAATTTTCCTGAATTCTGTCTTCTGGTACATTGGTTCAGTGGATCCGCAAAACTGAGAACAAGACTCGAGACCATGGTGCAGCCAGCTGCTCTCCTTAGATAAAATTTCTATCTTGTCTC----------TAACACAGTTTACATATTTTAATTTTTCTGGCAGAGCA-TTTTTCTTGATATGATTTCCACAGAATGTTAAAACAGAATAGGAATA-AAACTTTTTAATATTTATTC-----TTATATCTTCAAAATGAGTCATAACTATTTTTGTTTACACATAGATTTTTGAGATTCATTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1307900 316 - 1406956 TAACCAAAAGGATTCCTGGAAGAGTGTGATTCAATTTTCCTGAATTATGTCTTCTGGTACATTTGTTCTCTGGGTCTGCAAAACTGAGAACAAAACTCAGGACCCTGGTGCAGCCAGCTGCTCTCCATAGATAAAATTTCTACCTTCTCTCT----AACTATAACACAATTTACATATTTTAATTTTCCTGGTGGAGTA-TTTTTCTAGACATGATTTCC-------------ACAGAATTGAAATATGAAAATTTTAATATTTATTCTTGAGTCATATCTTCAAAATGAGTCATAATTGTTTTTGTTTGCACATAGATCTTTGAGATTCATTG i proCoq1.NW_012148742v1 C 0 I 470 s otoGar3.GL873546 11280208 323 - 20685099 TAACCAGAAGGATTCCCGACGGAGTGTGATTCAATTTTCCTGAATTCTGTCTTCTGGTACATTTGCTCTCGGGATATGCAAACCTGAGAGCAAGATTCAGGACCCTGGTGCAG-CAGCTGCTCTTCATAGATAAAATTTCTATCTTCTTCCT----AACTATAACACAGTCTACATACTTTCATTTTCCTGGCAGAGTG-TTTTTCTAGATGTGATTTCCACAACTTTTTAAAACAGAAAAGAGATATGaaaattttaatatttattttt--atCATATCTTCAAAATGAGTCATAGTTGTTTTCGTTTCTGCATAGATCATTGAGATTGT--- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112361624 321 - 122678785 TAACCAAAAAGATTCCTGAAAGAGTGTGATTCAATGTTCCTGAATTCTCTCTTCCAGTACATTGGTTCCCTGGATCTGCAAAGCCGAGAACAAGACTCGGGATCA-----CAGCCAGCTGCTCTCCCTAGATAAAATTTCTACCTTGTCTCTCTTTAACTACAACACAGTTTACA-ATTTTAATTTCCCTGGCAGAGTG-TTTTCCCGCATAGAATGAGCACAGAAATTTAAA-TAGAA-GGaaatattaaacttttaatattttttattaatCTACATCTTCAAAATAATTATTAAGTGTGTTTGT----ACATAAGTTTTTGAGGTTCATTG i canFam3.chr1 I 2 I 1 s dasNov3.JH575754 540540 298 - 2150887 TTACCAAAACGATTCCTGGAAGAGTGTAATTGAGTTTTTCCGAATCCTGCCTTCTGGTGCATTGGTTCACTAGGTTTGCGGCATGACAAAGGAGATTCTGGATCATGGTGCAGCCAGGGGCTCTTGCTACAT-AAACTTCTATCTTGTATCCCTTTAACTGTAACACGGTTCACATATTTTAATTTCCCTGACAGTC---TTTTTCTAGATGTAATTGCCACAGAAATCTAAAACAAGAAGCAAAGataaaaattttaatatttattCTTAACATGTAT----AAAGTAAACC----TTGTTTTTGATTG------------------------ i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I a score=711621.000000 s hg38.chr18_GL383571v1_alt 186861 66 + 198278 AATTATTGAGGTCTAAGAGTAAATTACAATGCTTATATAAAA----GAAGCTTG-TTTTTTT---GAATCTCTC s panTro5.chr18 65096906 66 + 78221452 AATTATTGAGGTCTAAGAGTAAATTACAATGCTTATATAAAA----GAAGCTTG-TTTTTTT---GAATCTCTC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64215818 66 + 77229886 AATTATTGAGGTCTAAGAGTAAATTACAATGCTTATATAAAA----GAAGCTTG-TTTTTTT---GAATCTCTC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435341 67 + 17472758 AATTATTGAGGTCTAAGAGTAAATTACAATGCTTATGTAAGA----GAAGCTTGTTTTTTTT---GAACCTCTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476429 66 - 152096393 AATTATTGAGGTCTAAGAGTAAATTACAATGCATATGTAAGA----GAAGCTTG-TTTTTTT---GAACCTCTC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57425879 66 + 70235451 AATTATTGAGGTCTAAAAGTAAATTACAATGCTTATACTAGA----GAAGCTTG-TTTTTCT---GAACATCTC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63117209 66 - 75711847 AATTATTGAGGTCTAAAAGTAAATTACAATGCTTATACTAGA----GAAGCTTG-TTTTTCT---GAACATCTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13676584 66 - 18804593 AATTATTGAGGTCTAAAAGTAAATTACAATGCTTATACTAGA----GAAGCTTG-TTTTTCT---GAACATCTC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13288296 66 + 18905526 AATTATTGAGGTCTAAAAGTAAATTACAATGCTTATACTAGA----GAAGCTTG-TTTTTGT---GAACATCTC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60117388 66 - 72318688 AATTATTGAGGTCTAAAAGTAAATTACAATGCTTATACTAAA----GAAGCTTG-TTTTTCT---GAACATCTC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 453658 64 - 1517660 AATTATTGAGGTCT--AAGTAATTTACAATGCTTATACTAGA----GAAGCTTG-TTTTTGT---GAACATCTC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3549438 66 + 6513552 AATTATTGAGGTCTAAAAGTAAATTACAATGCTTATACTAGA----GAAGCTTG-TTTTTCT---GAACATCTC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321018 65 + 117903854 AATTATTGAGGTCTAAGAGTAAATTACAATGCTTATATTAGA----GAAGCTTG-TTTTTCT---GAACA-CTC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508183 66 - 31320352 AATTATTGAGGTCTAAGAGTGAATTACAATGCCTGTATTAGA----GAAGCTTG-GTTTTCT---GAACATCTC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1710240 62 + 2203405 AATTATTGAGGTCTAAGAGTAAATTACAATGCTTATATTAGA----GAAGCTTG-TTTTTCT---GAACA---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3657795 66 - 14941987 AATTATTGAGGTCTAGGAATAAATTACGATGCTTATATTAGA----GAAGCTTG-TTTTTCT---GAACATCTC i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11280531 66 - 20685099 AATTAATGATGTCTAAGAGAAAATTATAGCACATATATTAGA----GAAGCATG-TTTTCCC---AAATATCTC i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112361946 67 - 122678785 CATTAAGGAAGTCTAAAAGGAGACTA--ATGCATGTATTAGA----GAAGCAGG-TTTTCCTAGAGAATCCTTC i canFam3.chr1 I 1 I 200 s dasNov3.JH575754 540838 54 - 2150887 ---------------AACATAAATTATAGTCCTTGTATTAGAGTGGGAAACATT-TTCTTAA---AGACCTCT- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I a score=1419466.000000 s hg38.chr18_GL383571v1_alt 186927 145 + 198278 AGAGCTGACTCTGAGAGACACTAGGGATTAAGGAGGTAACAAACCTAGATATCAAAAAATTAAGAACAGGAAACGAATCA---------------------------------GTTTGAA----TTATCAGA--------------------TGAGAGAGAGAGGA-------AGTCGCCAAGGGAGGAAACAGGAAAAAAGAGGTGAT s panTro5.chr18 65096972 145 + 78221452 AGAGCTGACTCTGAGAGACACTAGGGATTAAGGAGGTAACAAACCTAGATATCAAAAAATTAAGAACAGGAAGAGAATCA---------------------------------GTTTGAA----TTATCAGA--------------------TGAGAGAGAGAGGA-------AGTCGCCAAGGGAGAAAACAGGAAAAAAGAGGTGAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64215884 145 + 77229886 AGAGCTGACTCTGAGAGACACTAGGGATTAAGGAGGTAACAAACCTAGATATCAAAAAATTAAGAACAGGAAGAGAATCA---------------------------------GTTTGAA----TTATCAGA--------------------TGAGAGAGAGAGGA-------AGTCGCCAAGGGAGAAAACAGGAAAAAAGAGGTGAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435408 145 + 17472758 AGAGTTGACTCTGAGAGACACTAGGGATTAAAGAGGTAACAAACCTAGATATCAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TTATCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAGGTGAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476495 145 - 152096393 AGAGCTGACTCTGAGAGACACTAGGGATTAAGGAGGTAAAAAACTTAGATATCAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TTATCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAGGTGAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57425945 133 + 70235451 AGAGCTGACTC--AGAGACACTAGGGATTGAGGAGGTAACAAACTTAGATATGAAAAAATTAAGAACAGGAAAA-------------------------------------------GAA----TCACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAGGTGAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63117275 133 - 75711847 AGAGCTGACTC--AGAGACACTAGGGATTGAGGAGGTAACAAACTTAGATATGAAAAAATTAAGAACAGGAAAA-------------------------------------------GAA----TCACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAGGTGAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13676650 143 - 18804593 AGAGCTGACTC--AGAGACACTAGGGATTGAGGAGGTAACAAACTTATATATGAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TCACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAAGTGAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13288362 143 + 18905526 AGAGCTGACTC--AGAGACACTAGGGATTGAGGAGGTAACAAACTTAGATATGAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TCACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGGAAACAGGAAAAAGGAGGTGAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60117454 143 - 72318688 AGAGCTGACTC--AGAGACACTAGGGATTGAGGAGGTAACAAACTTAGACATGAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TTACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAGGTGAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 453722 143 - 1517660 AGAGCTGACTC--AGAGACACTAGGGATTGAAGAGGTAACAAACTTAGATATGAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TCACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGGAAACAGGAAAAAGGAGGTGAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3549504 143 + 6513552 AGAGCTGACTC--AGAGACACTAGGGATTGAGGAGGTAACAAACTTAGACATGAAAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTTGAA----TTACCAGA--------------------TGAGAGAGAGAGGA-------AGTCACCAAGGGAGAAAACAGGAAAAAGGAGATGAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321083 146 + 117903854 AGAGCCTACTCTGAGAGACACTAGGGATTAAGGAGGAAAGAAACTTAGATATC-AAAAATTAAGAACAGGAAAAAAATCA---------------------------------GCTAGAATTAGTTACCAGA----------------------GGAGAGAGAGGA-------AGTCACCAAGGGAGAAAGGAGGAAAAAGTGGGTGAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508249 144 - 31320352 AGAGCCGACTCTGAGAGACACTAGGGATTAAGGAGGAAACAAACTTAGATATC-AAAAATTAAGACCAGGAAAAGAATCA---------------------------------GCTAGAA----TTACCAGA--------------------CGAGAGAGAGAGGA-------AGTCAGCAAGGGAGAAAGCAGGAAAAAGTGGGTGAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1710302 137 + 2203405 -------GCTCTGAGAGACACTAGGGATTAAGGAGGAAACAAACTTAGATATC-AAAAATTAAGAACAGGGAAAGAATCA---------------------------------GCTAGAA----TTATCAGA--------------------TGAAGGGCAGAGGA-------AGTCACCAAGGGAGAAAGCAGGAAAAAGTGGGTGAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3657861 144 - 14941987 AGAGCCTACTCTGAGAGACACTAGGGATTAAGGAGGAAACAAACTTAGATATC-AAAAATTAAGAACAGGAAAAGAATCA---------------------------------GCTAGAA----TTACCAGA--------------------TGAGAGAGAGAGGA-------AATCACCAAAGGAGAAAGCAGGAAAAAGTGGGTGAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11280597 169 - 20685099 AGAGTAGTATATGAGAGATCTTAGAGATCAAGGAGTGAAGATA--TAAATATC-AAGAATGTAGAACAAGAAAAAAATCA------TACATTTAAGCATCTAGAAGAACATTGGCTTGAA----TTATCAAT--------------------TAAAATAGAAAAAA-------GATGACAAAGAAAGACACCTGCAAAAGAGAGACAAT i otoGar3.GL873546 C 0 I 1351 s dasNov3.JH575754 540892 191 - 2150887 -------------AGAAACATTAGTGGTCAAGGAGAGAACAAACATTAATAGC-AAGAAATAAGAACAGGAAAAGAAACATCCCAATGCAGTTAGACATAAGAAAGAACATGGACTTAAA----TTACCAGATTAAAAAAagagagagagagtgagagagagagaaagagagCAGGCCCCAAGGGAGTAAACAATGAAAGGAGGATGTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I a score=648011.000000 s hg38.chr18_GL383571v1_alt 187072 70 + 198278 ACCAAAGCAGCGATGCTCCACAATAGAGATACGCAGAGAGAGCAGGATCTAAGAGCAGCTTAGCATCTTT s panTro5.chr18 65097117 70 + 78221452 ACCAAAGCAGCGATGCTCCACAATAGAGATACGCAGAGAGAGCAGGATCTAAGAGCAGCTTAGCATCTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216029 69 + 77229886 ACCAAAGCAGCGATGCTCCACAATAGAGATACGCAGAGAGAGCAGGATCTAAGAGCAGCTTAGCATC-TT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435553 70 + 17472758 ACCAAAGCAGCGATGCCCCACAATAGCGATACACAGAGAGAGCAGGATCTAAGACCAGCTTAGCATCTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476640 66 - 152096393 ACCAAAGCAGCGATGCCCCACCATAGAGATACACGGAGAGAGCGGGATCTAAGACCAGCTTAGCAT---- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426078 70 + 70235451 ACCAAAGCAGAGATGCACTACGATGGACATACACAGAGAGAACAGGATCTAAGACCAGCCTAGCATCTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63117408 70 - 75711847 ACCAAAGCAGAGATGCACTACGATGGACATACACAGAGAGAACAGGATCTAAGACCAGCCTAGCATCTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13676793 70 - 18804593 ACCAAAGCAGAGATGCACTACGATGGACATACACAGAGAGAACAGGATCCAAGACCAGCCTAGCATCTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13288505 70 + 18905526 ACCAAAGCAGAGATGCACTACGATGGACATGCACAGAGAGAACAGGATCTAAGACCAGCCTAGCATCTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60117597 70 - 72318688 ACCAAAGCAGAGATGCACTACAATGGACCTACACAGAGAGAACAGGATCTAAGACCAGTCTAGCATCCTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 453865 70 - 1517660 ACCAAAGCAGAGATGCACTACGATGGACATACACAGAGAGAACAGGATCTAAGACCAGCCTAGCATCTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3549647 70 + 6513552 ACCAAAGCAGAGATGCACTACAATGGACATACACAGAGAGAACAGTATCTAAGACCAGCCTAGCATCTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321229 70 + 117903854 ACCAAAGCAGAGATGTGCCACAATACGAATACACAGAGAGAAAAGGATCTAAGGCCAGCTTGGCATCTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508393 70 - 31320352 ACCGAAGCAGAGATGTACCATAATACAAATACACAGAGAGAATAGGATCTAAGGCCAGCTTGGCATCTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1710439 70 + 2203405 GCCAAAGCAGAGATGCGCCACAATATGAATACGCAGAGAGAACAGGATCTAAGGCCAGCTTGGCATCTTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3658005 70 - 14941987 ACCAAAGCAGAGATGCGCCACAATACGAATACACAGAGAGAGCAGGATCTAAGGCCAGCTTGGCATCTTA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 541083 69 - 2150887 CCCAAAGCAGAGATGCTTCAGAATACAGAGACAAAGC-AGTCAGGGATCTAAGGTCAGGTTAGCATTTTT i dasNov3.JH575754 C 0 I 520 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1789006.000000 s hg38.chr18_GL383571v1_alt 187142 202 + 198278 TTTGAAA---------t--tttttaaaatttccataggtttttgggaaacaggtcgtgtttggttacatgaataagttctttagtggtgatttgtgagattttggtgcacccatcacccgagcagtgtacaccatacccaatttgtagtc--ttatctctcatccccgtcccacccttttccccaagtccccaaagtccgtcgtattattcttat s panTro5.chr18 65097187 204 + 78221452 TTTAAAA---------t--tttttaaaatttccataggtttttgggaaacaggtcgtgtttggttacatgaataagttctttagtggtgatttgtgagattttggtgcacccatcacccgagcagtgtacaccatacccaatttgtattcttttatctctcatccccgtcccacccttttccccaagtccccaaagtctgtcgtattattcttat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216098 204 + 77229886 TTTAAAA---------t--tttttaaaatttccataggtttttgggaaacaggtcgtgtttggttacatgaataagttctttagtggtgatttgtgagattttggtgcacccatcacccgagcagtgtacaccatacccaatttgtagtcttttatctctcatccccgtcccacccttttccccaagtccccaaagtctgtcgtattattcttat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435623 206 + 17472758 AAAAAAA--TT-----T--Tttttttaatttccataggtttttgggaaacaggtcgtgtttggttacatgaataagttctttcgtggtgatttgtgagattttggtgcacccatcactcgagcagtgtgcaccatacccaatttgtagtcttttatctctcatccctgtcccacccttttccccaagtccccaaagtccatcgtattattcttat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476706 197 - 152096393 ----------------T--Tttgttttatttccgtaggtttttgggaaacgggtcgtgtttggttacatgaataagttctttagtggtgatttgtgagattttggtgcacccatcacccgagcagtgtacaccatacccaatttatagtcttttatctctcatccccgtctcacccttttccccaagtccccaaagtccatcgtattattcttat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426148 204 + 70235451 TTTTTAAA-TT-----T--Tttttttaatttccataggtttttgggaaacaggttctgttttgttacatgcataag---tttagtggtgatttgtgagattttggtgcacccatcacccgagcagtataccctgtacccaatttgtagtcttttatcacttatccccctcccacccctttccccaagtccccaaagtccattgtattattcttat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63117478 205 - 75711847 TTTTTAAATTT-----T--Tttttttaatttccataggtttttgggaaacaggttctgttttgttacatgcataag---tttagtggtgatttgtgagattttggtgcacccatcacccgagcagtataccctgtacccaatttgtagtcttttatcacttatccccctcccacccctttccccaagtccccaaagtccattgtattattcttat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13676863 205 - 18804593 TTTTTAAATTT-----T--Tttttttaatttccataggtttttgggaaacaggttctgttttgttacatgcataag---tttagtggtgatttgtgagattttggtgcacccatcacccgagcagtataccctgtacccaatttgtagtcttttatcacttatccccctcccacccctttccccaagtccccaaagtccattgtattattcttat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13288575 207 + 18905526 TTTTTTAATTTAA---T--Ttttttttatttccataagtttttgggaaacaggttctgttttgttacatgcataag---tttagtggtgatttgtgagattttggtgcacccatcacccgagcagtataccctgtgcccaatttgtagtcttttatcactcatccccctcccaccgttttccccaagtccccaaagtccattgtattattcttat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60117667 210 - 72318688 TTTTTTAATTTTAGGTT--Ttttttttatttccataggtttttaggaaacaggttctgttttgttacgtgcataag---tttagtggtgatttgtgagattttggtgcacccatcacccgagcagtataccctgtacccaatttgtagtcttttatccctcatccccctcccacccttttccccaagtccccaaagtccattgtattattcttat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 453935 207 - 1517660 TTTTTTAATTTAA---T--Ttttttttatttccattggtttttgggaaacaggttctgttttgttacatgcataag---tttagtggtgatttgtgagattttggtgcacccatcacccgagcagtataccctgtacccaatttgtagtcttttatcactcatccccctcccacccttttccccaagtccccaaagtccattgtattattattat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3549717 206 + 6513552 TTTTTAATTTTAA---t--tttttaaaatttccataggtttttggg-aacaggtactgttttgttacgtgcataag---tttagtggtgagttgtgagattttggtgcacccatcacccgagcagtataccctgtacccaatttgtagtcttttataactcatccccctcccacccttttccccaagtccccaaagtccattgtattattcttat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321299 210 + 117903854 TTTTTTAATTTAA---A--Tttttttaatttccataggtttttgggaagcaggtggtgtttggttatatgaataagttatttggtagttatttgtaagattctggtgcacttatcaccagagcagtatacactgtacccaatttatagtcctttatccctcatctccttcccacctgtttccctaagtccccaaagtccattgtattattcttat i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508463 209 - 31320352 TTTTTTAATTT-A---A--Ttttttttatttccataggtttttgggaaacaggtggtgtttgtttatatgaataatttacttagtagtgatttgtaagattttggtgcacccatcaccagagcagtacacactgtacccaatttatagtcttttatccctcatccccttcccacctgtttccctaggtccccaaagaccattatattattcttat i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1710509 209 + 2203405 TTTTTTAATTT-A---A--Ttttttttatttccataggtttttgggaaacaggtggtatttggttatatgaataagttacctagtagtgatttgtaagattttggtgcacccatcaccagagcagtatacactgtacccaatttatagtcttttatccctcagccccttcccacctgtttccctaagtccccaaagtcctttgtattattctcat i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3658075 211 - 14941987 TTTTTTAATTT-A---AATTtttttttatttccataggtttttgggaaacaggtggtgtttggttatgtgaataagttatttagcagtgatttgtaagattttggtgcacccatcaccggagcagtatacactgtacccaatttatagtcttttatccctcatccccttcccacccgtttccctaagtccccaaagtccattgtattattattat i aotNan1.NW_018502140v1 C 0 I 575 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1320739.000000 s hg38.chr18_GL383571v1_alt 187344 158 + 198278 gcctttgtgtcctcacaactgagctcccatttgtcagtgggaagatacaatatttggttttccattcttgtgttgcttcacttagaataatggtttacaattccatccaggttgctgcagatgcagttattttgttcctttttatggctgaatag--tat s panTro5.chr18 65097391 160 + 78221452 gcctttgtgtcctcacaactgagctcccatttgtcagtgggaagatacaatatttggttttccattcttgtgttgcttcacttagaataatggtttacaattccatcccggttgctgcagatgcagttattttgttcctttttatggctgaatagtatat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216302 158 + 77229886 gcctttgtgtcctcacaactgagctcccatttgtcagtgggaagatacaatatttggttttccattcttgtgttgcttcacttagaataatggtttacaattccatcccggttgctgcagatgcagttattttgttcctttttatggctgaatag--tat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435829 160 + 17472758 gcctttgtgtcctcacaactgagctcccatttgtcagtgggaacatacaatatttggttttccattcttgtgttgcttcacttagaataatggtttacaattccatccaggttgctgcagatgcaattattttgttcctttttattgctgaatagtgcat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139476903 158 - 152096393 gcctttgtgtcctcacaactgagctcccatttgtgagtggcaacatacaatatttagttttccattcttgtgttgcttcacttagaataatggtttacagttccattcaggttgctgcagatgcaatcattttgttcctttttatggctgaatag--tat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426352 158 + 70235451 gcctttgcatcctcacaactgagctcccacttgtgaatgggaacatacaatatttggttttccattcctgggttgcttcacttagaataatggtttacaattccatccaggttgctgcaaatgccattatttcgttcctttttatggctgaatag--tat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63117683 158 - 75711847 gcctttgcatcctcacaactgagctcccacttgtgaatgggaacatacaatatttggttttccattcctgggttgcttcacttagaataatggtttacaattccatccaggttgctgcaaatgccattatttcgttcctttttatggctgaatag--tat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13677068 158 - 18804593 gcctttgcatcctcacaactgagctcccacttgtgaatgggaacatacaatatttggttttccattcctgggttgcttcacttagaataatggcttacaattccatccaggttgctgcaaatgccattatttcgttcctttttatggctgaatag--tat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13288782 158 + 18905526 gcctttgcatcctcacaactgagctcccacttgtgaatgggaacatacaatatttggttttccattcctgggttgcttcacttagaataatggtttacaattccatccaggttgctgcaaatgccattatttagttcctttttatggctgaatag--tat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60117877 158 - 72318688 gcctttgcatcctcacagctgagctcccacttgtgaatgggaacatacaatatttggttttccattcctgggttgcttcacttagaataatggtttacaattccatccaggttgctgcaaatgccattatttcgttcctttttatggctgaatag--tat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 454142 158 - 1517660 gcctttgcatcctcacaactgagctcccacttgtgaatgggaacatacaatatttggttttccattcctgggttgcttcacttagaataatggtttacaattccatccaggttgctgcaaatgccattatttagttcctttttatggctgaatag--tat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3549923 158 + 6513552 aactttgcatcctcacaactgagctcccacttgtgaatggaaacatacagtgtttggttttccattcctgggttgcttcacttagaataatggtttccaattccatccaggttgctgcaaatgccattatttcgttcctttttatggctgaatag--tat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321509 158 + 117903854 gcctttgcctcctcatgacttagctcccacttatgagtgggagcatacaatgtttggttttccattattgtgttatttcacttggaataatgttctccaattccattcaggttgctgcaaatgccattatttaattcctttttatggctgactag--tat i calJac3.chr13 C 0 I 30 s saiBol1.JH378121 19508672 158 - 31320352 gcctttgcatcctcatgacttagctcccacttataagtgggaacatacaatgtttgcttttccattcttgtgttatttcacttagaataacgttcaccaattccattcagggtgctgcaaatgctattatttcattcctttttatggctgaatag--tat i saiBol1.JH378121 C 0 I 121 s cebCap1.NW_016107689v1 1710718 157 + 2203405 gcctttacatcctcatgacttagctcccacttatgagtgggaacatgtaatgtttgg-ttgccattcttgtgttatttcacttagaataatgttctccaattccatccaggttgctgcaaatgccattatttcatttctttttatggctgaatag--tat i cebCap1.NW_016107689v1 C 0 I 131 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I a score=85809.000000 s hg38.chr18_GL383571v1_alt 187502 19 + 198278 atatatat------atacacacaca s panTro5.chr18 65097551 19 + 78221452 atatatat------atacacacaca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216460 19 + 77229886 atatatat------acacacacaca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5435989 20 + 17472758 atatatata-----acacacacaca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477061 25 - 152096393 atgtatacacacacacacacacaca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426510 19 + 70235451 gtgtatat------atatacgcaca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63117841 19 - 75711847 gtgtatat------atatacacaca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13677226 19 - 18804593 gtgtatat------atatacacaca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13288940 19 + 18905526 gtgtgtat------atatatacaca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60118035 19 - 72318688 gtgtatgt------atatacacaca i chlSab2.chr18 C 0 I 249 s manLeu1.NW_012106698v1 454300 19 - 1517660 gtgtgtat------atatacacaca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550081 19 + 6513552 gtgtatat------atacacacaCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321697 19 + 117903854 gtgtctat------atttaaccatc i calJac3.chr13 I 30 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I e cebCap1.NW_016107689v1 1710875 131 + 2203405 I e saiBol1.JH378121 19508830 121 - 31320352 I a score=11165.000000 s hg38.chr18_GL383571v1_alt 187521 2 + 198278 ca s panTro5.chr18 65097570 2 + 78221452 ca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216479 2 + 77229886 ca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436009 2 + 17472758 ca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477086 2 - 152096393 ca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426529 2 + 70235451 ca i rheMac8.chr18 C 0 I 291 s macFas5.chr18 63117860 2 - 75711847 Ca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13677245 2 - 18804593 ca i macNem1.NW_012016688v1 C 0 I 305 s cerAty1.NW_012001075v1 13288959 2 + 18905526 ca i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 454319 2 - 1517660 ca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550100 2 + 6513552 Ca i colAng1.NW_012115433v1 C 0 I 273 s calJac3.chr13 105321716 2 + 117903854 ta i calJac3.chr13 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I e cebCap1.NW_016107689v1 1710875 131 + 2203405 I e saiBol1.JH378121 19508830 121 - 31320352 I e chlSab2.chr18 60118054 249 - 72318688 I a score=1757.000000 s hg38.chr18_GL383571v1_alt 187523 1 + 198278 c s panTro5.chr18 65097572 1 + 78221452 c i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216481 1 + 77229886 c i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436011 1 + 17472758 c i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477088 1 - 152096393 c i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63117862 1 - 75711847 t i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13288961 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 454321 1 - 1517660 c i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105321718 1 + 117903854 t i calJac3.chr13 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I e cebCap1.NW_016107689v1 1710875 131 + 2203405 I e saiBol1.JH378121 19508830 121 - 31320352 I e colAng1.NW_012115433v1 3550102 273 + 6513552 I e chlSab2.chr18 60118054 249 - 72318688 I e macNem1.NW_012016688v1 13677247 305 - 18804593 I e rheMac8.chr18 57426531 291 + 70235451 I a score=-864.000000 s hg38.chr18_GL383571v1_alt 187524 1 + 198278 -a s panTro5.chr18 65097573 1 + 78221452 -a i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216482 1 + 77229886 -a i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436012 1 + 17472758 -a i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477089 1 - 152096393 -a i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63117863 1 - 75711847 -a i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13288962 1 + 18905526 -a i cerAty1.NW_012001075v1 C 0 I 297 s manLeu1.NW_012106698v1 454322 1 - 1517660 -a i manLeu1.NW_012106698v1 C 0 I 258 s colAng1.NW_012115433v1 3550375 1 + 6513552 -a i colAng1.NW_012115433v1 I 273 C 0 s calJac3.chr13 105321719 1 + 117903854 t- i calJac3.chr13 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I e cebCap1.NW_016107689v1 1710875 131 + 2203405 I e saiBol1.JH378121 19508830 121 - 31320352 I e chlSab2.chr18 60118054 249 - 72318688 I e macNem1.NW_012016688v1 13677247 305 - 18804593 I e rheMac8.chr18 57426531 291 + 70235451 I a score=6315.000000 s hg38.chr18_GL383571v1_alt 187525 3 + 198278 cat s panTro5.chr18 65097574 3 + 78221452 cat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216483 3 + 77229886 cat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436013 3 + 17472758 cat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477090 3 - 152096393 cat i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63117864 3 - 75711847 tat i macFas5.chr18 C 0 I 282 s colAng1.NW_012115433v1 3550376 3 + 6513552 cat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321720 3 + 117903854 tat i calJac3.chr13 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I e cebCap1.NW_016107689v1 1710875 131 + 2203405 I e saiBol1.JH378121 19508830 121 - 31320352 I e manLeu1.NW_012106698v1 454323 258 - 1517660 I e chlSab2.chr18 60118054 249 - 72318688 I e cerAty1.NW_012001075v1 13288963 297 + 18905526 I e macNem1.NW_012016688v1 13677247 305 - 18804593 I e rheMac8.chr18 57426531 291 + 70235451 I a score=1044.000000 s hg38.chr18_GL383571v1_alt 187528 3 + 198278 -------cat- s panTro5.chr18 65097577 3 + 78221452 -------cat- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216486 3 + 77229886 -------cat- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436016 3 + 17472758 -------cat- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477093 3 - 152096393 -------cat- i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63118149 3 - 75711847 -------cac- i macFas5.chr18 I 282 C 0 s colAng1.NW_012115433v1 3550379 3 + 6513552 -------cac- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321723 11 + 117903854 ctatctatatc i calJac3.chr13 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3658286 575 - 14941987 I e cebCap1.NW_016107689v1 1710875 131 + 2203405 I e saiBol1.JH378121 19508830 121 - 31320352 I e manLeu1.NW_012106698v1 454323 258 - 1517660 I e chlSab2.chr18 60118054 249 - 72318688 I e cerAty1.NW_012001075v1 13288963 297 + 18905526 I e macNem1.NW_012016688v1 13677247 305 - 18804593 I e rheMac8.chr18 57426531 291 + 70235451 I a score=67023.000000 s hg38.chr18_GL383571v1_alt 187531 9 + 198278 aatttcttc s panTro5.chr18 65097580 9 + 78221452 aatttcttc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216489 9 + 77229886 aatttcttc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436019 9 + 17472758 aatttcttc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477096 9 - 152096393 aatttcttc i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63118152 9 - 75711847 aatttcttt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13677552 9 - 18804593 aatttcttt i macNem1.NW_012016688v1 I 305 C 0 s cerAty1.NW_012001075v1 13289260 9 + 18905526 aatttcttt i cerAty1.NW_012001075v1 I 297 C 0 s manLeu1.NW_012106698v1 454581 9 - 1517660 aatttcttt i manLeu1.NW_012106698v1 I 258 C 0 s colAng1.NW_012115433v1 3550382 9 + 6513552 aatttcttt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321734 9 + 117903854 aatttcttt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508951 9 - 31320352 aatttgttt i saiBol1.JH378121 I 121 C 0 s cebCap1.NW_016107689v1 1711006 9 + 2203405 aatttcttt i cebCap1.NW_016107689v1 I 131 C 0 s aotNan1.NW_018502140v1 3658861 9 - 14941987 aatttcttt i aotNan1.NW_018502140v1 I 575 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e chlSab2.chr18 60118054 249 - 72318688 I e rheMac8.chr18 57426531 291 + 70235451 I a score=60991.000000 s hg38.chr18_GL383571v1_alt 187540 7 + 198278 atccact s panTro5.chr18 65097589 7 + 78221452 atccact i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216498 7 + 77229886 atccact i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436028 7 + 17472758 atccact i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477105 7 - 152096393 atccact i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426822 7 + 70235451 atccact i rheMac8.chr18 I 291 C 0 s macFas5.chr18 63118161 7 - 75711847 atccact i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13677561 7 - 18804593 atccact i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13289269 7 + 18905526 atccact i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 454590 7 - 1517660 atccact i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550391 7 + 6513552 atccact i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321743 7 + 117903854 acctact i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508960 7 - 31320352 acctact i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711015 7 + 2203405 acccact i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3658870 7 - 14941987 acccact i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e chlSab2.chr18 60118054 249 - 72318688 I a score=4236712.000000 s hg38.chr18_GL383571v1_alt 187547 448 + 198278 cactgattgatggacatttgagctggctcctta-ttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatttcttttgtataatgatttcttttcctctgggtagacacccagtagtgggattgctggatcaaatgacagttctacttttagttatttaaggaatctccacactgttttccataggggttgtactagtttacattcctactcgcagtgtgaaagtgttcccttttcactgcatcctcgccaacatctatta---------ttttttaattttttgattatggccattctttcatgagtaaagtggtatcacattgtggttttgatttgcacttccctggtaattagtgatgttgaacattttttcataggtttcttggccattcgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA s panTro5.chr18 65097596 448 + 78221452 cactgattgatggacatttgagctggctcctta-ttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttcttttcctctgggtagacacccagtagtgggattgctggatcaaatgacagttctacttttagttatttaaggaatctccacactgttttccataggggttgtactagtttacattcctactcgcagtgtgaaagtgttcccttttcactgcatcctcgccaacatctatta---------ttttttaattttttgattatggccattctttcgtgagtaaagtggtatcacattgtggttttgatttgcacttccctggtaattagtgatgttgaacattttttcataggtttcttggccattcgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216505 448 + 77229886 cactgattgatggacatttgagctggctcctta-ttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttcttttcctctgggtagacacccagtagtgggattgctggatcaaatgacagttctacttttagttatttaaggaatctccacactgttttccataggggttgtactagtttacattcctactcgcagtgtgaaagtgttcccttttcactgcatcctcgccaacatctatta---------ttttttaattttttgattatggccattctttcatgagtaaagtggtatcacattgtggttttgatttgcacttccctggtaattagtgatgttgaacattttttcataggtttcttggccattcgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436035 448 + 17472758 cactgattgatggatatttgagctggctcctta-ttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgcgcaagtatctcttttgtataatgatttcttttcctctggatagacacccagtagtgggattgctggatcaaatgacagttctacttttagttatttaaggaatctccacactgttttccatagtggttgtactagtttacattcctactcgcagtgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttttaattttttgattatggccattctttcatgagtaaagtggtatcacattgtggttttgatttgcacttccctggtaattagtgatgttgaacattttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477112 446 - 152096393 cactgattgatggacatttgagctggctcctta-ttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaac--gtgtgtgcaagtatctcttctgtataatgatttcttttcctctgggtagacacccagtagtgggattgctggatcaaatgacagttctacttttagttatttaaggaatctccacactgttttccatagtggttgtactagtttacattcctactcgcagtgtgaaagtgttcccttttcactgcatcctcgccaacatctatta---------ttttttaatattttgattatggccattctttcatgaggaaagtggtatcacattgcggttttgatttgcacttccctggtaattagtgatattgaacattttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57426829 449 + 70235451 cattgattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttctgttcttctgggtagatacccagtagtgtgattgctggatcaaatgacagctctacttttagttctttaaggaatctccccactgttttccacagtagttgtactagtttacgttcccatccacagcgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttgtagttttttgattatggccattctttcatgagtaaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgatgttgagcacattttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118168 449 - 75711847 cattgattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttctgttcttctgggtagatacccagtagtgtgattgctggatcaaatgacagctctacttttagttctttaaggaatctccccactgttttccacagtagttgtactagtttacattcccatccacagcgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttgtagttttttgattatggccattctttcatgagtaaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgatgttgagcacgttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13677568 449 - 18804593 cattgattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttctgttcttctgggtagatacccagtagtgtgattgctggatcaaatgacagctctacttttagttctttaaggaatctccccactgttttccacagtagttgtactagtttacattcccatccacagcgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttgtagttttttgattatggccattctttcatgagtaaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgatgttgagcacgttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13289276 449 + 18905526 cattgattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctatcaacatgtgtgtgcaagtatctcttttgtataatgatttcttttcttctgggtagatacccagtagtgtgattgctggatcaaatgacagctccacttttagttctttaaggaatctccccactgttttccacagtggttgtactagtttacattcccatccacagcgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttgtagttttttgattatggtcattctttcatgagtaaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgatgttgagcatgttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60118303 447 - 72318688 cactcattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataa--atgtgtgtgcaagtatctcttttgtataatgatttcttttcttctgggtagatacccagtagtgtgattgctggatcaaatgacagctctacttttagttctttaaggaatctccccactgttttccacggtggttgtactagtttacattcccatccacagcgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttgtagttttttgattatggccattctttcatgagtaaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgatgttgatcatgttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i chlSab2.chr18 I 249 C 0 s manLeu1.NW_012106698v1 454597 449 - 1517660 cattgattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaatttgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttcttttcttctgggtagatacccagtagtgtgattgctggatcaaatgacagctctacttttagttctttaaggaatctccccactgttttccacagtggttgtactagtttacattcccatccacagcgtgaaagtgttcccttttcactgcatcctcaccaacatctatta---------ttttgtagttttttgattatggtcattctttcatgagtgaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgatgttgagcatgttttcatatgtttcttggtcatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550398 449 + 6513552 cattgattgatggacatttgagctggttcaatatttttttt-----------------------------------------------------------tgcaattgcaaattgtgctgctataaacatgtgtgtgcaagtatctcttttgtataatgatttcttttcttctgggtagatacccagtagtgtaattgctggatcaaatgacagttctacttttagttctttaaggaatctccacactgttttccacagtggttatactagtttacattcccatccacagcatgaaagtgttcccttttcactacatcctcaccaacatctatta---------ttttttcattttttgattatggccattcttccatgagtgaagtggtatcactttgtggttttgatttgcacatccctggtaattagtgacattgagcatgttttcatatgtttcttggccatttgtgtatcCTGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGACAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105321750 453 + 117903854 cattgatggataagcatttgagcaggctccatatttttttc-------------------------------------------------------tttttgcaattgcaaattgtgctgctacaaacgtgtttg--caagtatcatttttgtatcgtgattccttttcccctgggtagatacccagtagtgggactactggatcaaatggcagttctacttttaggtctttaaggaatctccacactcttttccacagtggttgtactagtttacattcccatcaacagtgtaaaagtgttttgttttcgctgcaccagcaccaacatctatta--ttttttttttttttaatttttgattgtggccattctttcatgagtaaagtggtatcacattgtggttttgatttgcatttccctgataattagtgatataaatca-tctttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTT----GATAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19508967 509 - 31320352 cattgattgataggcatttgagctggctccgtttttttttttttgtttttttttgttgttgttgttgtttttgtttgtttgttttttttgtttttgtttttgcaattgcaaattgtgctgctacaaacatgtatgtacaagtatcatttttatatcatgattccttttcctctgggtagatacccagtaatgggactgctggatcaaatggtagttctactcttaggtctgtaaggaatctccacactctttttcatagtgtttgtactagtttacattcccatcagcagtgtaaaag-----tgttttcactgcacctgcaccaacgtctattgttttttttttttttttaatttttgattatggccattctttcattagtaaaatggtatcacattgtggttttgatttgcatttccctgata---agtgatattgagcattttttcatatgtttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGATAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711022 450 + 2203405 cattgattgataggcatttgagctggctccatattttctta--------------------------------------------------------ttttgcaattgcaaattgtgctgctacaaacatgtgtgtgcaagtatcatttttgtattatgattccttttcctctgggtagatacccagtagtgggactgctggatcaaatggtagttct--ttttaggtctttaaagaatctccacactcttttccatagtagttgtactagattacattcccatcagcagtgtaaaggtgttttctcttcactgcacctgcaccaatgtctatta--------ttttttttaatttttgattatggccattctttaatgagtaaagtggtatcacattgtggttttgatttgcatttccctgataattagtgatactgagcattttttcatatgcttcttggccatttgtgtatcttGAAAGTTACAGAGAAATAGTAGCTTTCTCTTGATAGATA- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3658877 461 - 14941987 cattgattgataggcatttgggctggctccatatttttttt-------------------------------------------------ttttttttttggcaattgcaaattgtgctgctacaaacatgtgtatgaaagtatcatttttgtatcttgattccttttcatctgggtggatacccagtagtgggactactggatcaaatggtagttctacttttaggtctttaaggaatctccacactcttttccatagtggttgtactagtttacattcccatcagcagtgtaaaagtgttttcttttcactgcacctgcaccaacgtctatta-------ttattttttaattttcgattatggccattctttcatgagtaaagtggtatcacattgtggttttgatttgcatttccctgataattagtgatattgagcatttgttcatatgtttcttggccctttgtgtatcttGAAAGTTATAGAGAAATAGTAGCTTTCTCTTGATAGATAA i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111879641 1676 + 195471971 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=555596.000000 s hg38.chr18_GL383571v1_alt 187995 63 + 198278 AGACGGAGT--GAGAGAGAATTGCtatttaattagaattattgattttatcctaattattatttt s panTro5.chr18 65098044 65 + 78221452 AGACGGAGTGAGAGAGAGAATTGCtatttaattagaattattgattttatcctaattattatttt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64216953 65 + 77229886 AGACGGAGTGAGAGAGAGAATTGCtatttaattagaattattgattttatcctaattattatttt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436483 65 + 17472758 AGATGGAGAGAGAGAGAGAATTGCtatttaattagaattattgattttatcctaattattatttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477558 65 - 152096393 AGAAGGAGTGTGAGAGAGAATTGCTATTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427278 65 + 70235451 AGACAGAGTGAAAGAGAGACTTGCTACTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118617 65 - 75711847 AGACAGAGTGAAAGAGAGACTTGCTACTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678017 65 - 18804593 AGACAGAGTGAAAGAGAGACTTGCTACTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13289725 64 + 18905526 AGACGGAGTGAAAGAGAGAATTGCTA-TTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60118750 65 - 72318688 AGATGGAGTGAAAGAGAGAATTGCTATTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455046 65 - 1517660 AGACGGAGTGAAAGAAAGAATTGCTATTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550847 65 + 6513552 AGACGCAGTGAAAGAGAGAATTGCTGTTTAATTAGAATTACTGATTTTATCCTAATTATTATTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322203 61 + 117903854 AGAC----AGAAAGAGGGAATTGCAATTTGATTAGAATTGCTGATTTTGTCCTAATTATTTTTGC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509476 61 - 31320352 AGAC----AGAGAGAAAGAATTGCAATTTGATTAGAATTACTGATTTTATCCTAATTATTATTGC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711472 57 + 2203405 --------AGACAGAAAGAATTGCAATTTGATTAGAATTACTGATTTTATTCTAATTATTATTGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659338 57 - 14941987 --------AGAGAAAGAGAATTGCCATTTGATTAGAATTATTGATTTTATCCTAATTATTATTGC i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111881317 52 + 195471971 AGATGGGGC---AAAGAGAGGTATAATTT------AATTTTTAATTT----CCATTCATTGGTGT i mm10.chr1 I 1676 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e dasNov3.JH575754 541152 520 - 2150887 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=601628.000000 s hg38.chr18_GL383571v1_alt 188058 61 + 198278 tatttttTCCCAAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT s panTro5.chr18 65098109 61 + 78221452 tatttttTCCCAAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217018 61 + 77229886 tatttttTCCCAAAGAATACTATCTCTTATTTAGTATTTGTAGATATC---------TAGGTTGAGTGGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436548 61 + 17472758 tatttttTCCCAAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477623 61 - 152096393 TATTTTTTCCCAAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGCTGAGTGGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427343 61 + 70235451 TATTTTTTCCCTAGGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118682 61 - 75711847 TATTTTTTCCCTAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678082 61 - 18804593 TATTTTTTCCCTAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13289789 61 + 18905526 AATTTTTTTCCTAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60118815 60 - 72318688 TATTTTTTCCCTAAGAATACTATCTCTTACTCAGTATTTGTAGATATC----------AGGTTGAGTGGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455111 61 - 1517660 TATTTTTTTCCTAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550912 61 + 6513552 TATTTTTTCCCTAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGGTTGAGTGGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322264 59 + 117903854 TA-TTTTTCCCAAAGAATAATATCTCTTATTCAGTATTTGTAGATATC---------TAGG-TAAGTGGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509537 59 - 31320352 TA-TTTTTCCATAAGAATACTATCTCTTATTCAGTATTTGTAGATATC---------TAGG-TAAGTGGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711529 59 + 2203405 TA-TTTTTCCATAAGAATACTATCTTTTATTCAGTATTTGTAGACACC---------TAGG-TAAGTGGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659395 59 - 14941987 TA-TTTTTCCCTAAGAATACTCTCTCTTATTCAATATTTGTAGATATC---------TAGG-TAAGTGGG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111881369 61 + 195471971 TGTTTTTTAGCCTAAGATCCTAATATTAATTCATTGTTTGTTGTTATC---------TTAGATTAGTAGT i mm10.chr1 C 0 C 0 s dasNov3.JH575754 541672 67 - 2150887 TAATTCTATCCTAAGAATACTACC--TTATTCAACCATTGTGGCCACTAATTTATAATAGA-TCAGTGAT i dasNov3.JH575754 I 520 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1308216 470 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1564384.000000 s hg38.chr18_GL383571v1_alt 188119 128 + 198278 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGTA--CACCACTAGCAATGTCAAAACTGGAA------------------------------------TTTATCCATGGTTGGATAATCATGTATGTGAA s panTro5.chr18 65098170 128 + 78221452 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGTA--CACCACTAGCAATGTCAAAACTGGAA------------------------------------TTTATCCATGGTTGGATAATCATGTGTGTGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217079 128 + 77229886 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGTA--CACCACTAGCAATGTCAAAACTGGAA------------------------------------TTTATCCATGGTTGGATAATCATGTGTGTGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436609 128 + 17472758 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGTA--CACCACTAGCAACGTCAAAACTGGAA------------------------------------TTTATCCATGGTTGGATAATCATGTATGTGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477684 128 - 152096393 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGTA--CACCACTAGTAATGTCAAAACTGGAA------------------------------------TTTATCCATGGTTGGATAATCATGTATGTGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427404 128 + 70235451 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAAGACCTGAAGCA--CACCACTAACAATGTCAAAACTAGAA------------------------------------TTTCTCCAGGGTTGGATAATCATGTATGTGAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118743 128 - 75711847 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGCA--CACCACTAACAATGTCAAAACTAGAA------------------------------------TTTCTCCAGGGTTGGATAATCATGTATGTGAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678143 128 - 18804593 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGCA--CACCACTAACAATGTCAAAACTAGAA------------------------------------TTTCTCCAGGGTTGGATAATCATGTATGTGAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13289850 128 + 18905526 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGCA--CACCACTAACAATGTCTAAACTAGAA------------------------------------TTTCTCCACGGTTGGATAATCATGTATGTGAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60118875 128 - 72318688 TTTAGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGCA--CACCACTAACAATGTCAAAACTAGAA------------------------------------TTTCTCCACGGTTGGATAATCATGTATGTGAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455172 128 - 1517660 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGCA--CACCACTAACAATGTCTAAACTAGAA------------------------------------TTTCTCCACGGTTGGATAATCATGTATGTGAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3550973 128 + 6513552 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATATTGCAGCTA------TGGAAGTTGGCAAGGACCTGAAGCA--CACCACTAACAATGTCAAAACTAGAA------------------------------------TTTCTCCACAGTTGGATAATCATGTATGTGAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322323 134 + 117903854 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATACTGCAGCTAGAGTTCTGGAAGTTGGTAAGGACCTGAAGTA--CATCATGAGCAATGTCAAAACTGGAA------------------------------------TTTATCTGTGGTAGGATAATTATGTATGTGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509596 134 - 31320352 TTTTGACCAAGCAATAATTGTGAGAAAGAGATATTACTGCAGCTAGAGTTCTGGAAGTTGGCAAGGACCTGAAGTA--CATCACCAGCAATGTCAAAACTGGAA------------------------------------TTTATCCATGGTAGGATAATCATGTATGTGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711588 134 + 2203405 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATACTGCAGCTAGAGTTCTGGAAGATGGCAAGGACCTGAAGTA--CATCACCAGCAATGTCAAAACTGGAA------------------------------------TTTATCCATGGTAGGATAATCATGTATGTGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659454 134 - 14941987 TTTTGACCAAGCAGTAATTGTGAGAAAGAGATAATACTGCAGCTAAAGTTCTGGAAGTTGGCAAGGACCTGAAGTA--CATCATCAGCGATGTCAAAACTGGAA------------------------------------TTTATCCATGGTAGGATAATCATGTATGTGAA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1308686 132 - 1406956 TTTTGACTAAGCAGCAATTGTGAGAAAGTGGTAATATTCCAGCTAGGATCCTGGAAGTTGGCAAGGACCTGAAGCA--CACC--TAGTAATGTCAAAATTGGAA------------------------------------TTTATCCACGATGGGATAATCATGCATGTGAA i proCoq1.NW_012148742v1 I 470 I 124 s mm10.chr1 111881430 168 + 195471971 TTTTGATCAAGCAGCATTTATAAGAATATTATCGTATTTCATTTAGTGTCTTGGAAATTGATAAGCAACTGA--CC--AACTATGTATAAATTCAGAATTGGAATTTTACACAATACCCTAGGAAATTAAATGCTTGAAGTTTATTCATTGTAATATAAATATATGTGCATA i mm10.chr1 C 0 C 0 s dasNov3.JH575754 541739 136 - 2150887 TTTCATCCACAGGGGAATTGTGAGAAAGCGATCATATTGTAGAAAGAGACCTGGAAATTGGTAAATACTTGAAGCATGCATTGCTGGTAATATCAAAATAGAAA------------------------------------CTTATCAATGGTGGGATAATTGTGTATGGGAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=495356.000000 s hg38.chr18_GL383571v1_alt 188247 53 + 198278 GTGATTCGGGTGCTAA---AAA--T----TTAATATCTGCTGATCTAAACAC--TAGTATTTTT---- s panTro5.chr18 65098298 53 + 78221452 GTGATTCTGGTGCTAA---AAA--T----TTAATATCTGCTGATCTAAACAC--TAGTATTTTT---- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217207 53 + 77229886 GTGATTCTGGTGCTAA---AAA--T----TTAATATCTGCTGATCTAAACAC--TAGTATTTTT---- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436737 53 + 17472758 GTGATTCTGGTGCTAA---AAA--T----TTAATATCTGCTGATCTAAACAC--TAGTATTTTT---- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477812 53 - 152096393 GTGATTCTGGTGCTAA---AAA--T----TTAATATCTGCTGATCTAAACAC--TAGTATTTTT---- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427532 53 + 70235451 GTGATTCTGCGGCTAA---AAA--T----TTAATATCTACTGATCTAAACAC--TGGTATTTTT---- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118871 53 - 75711847 GTGATTCTGCGGCTAA---AAA--T----TTAATATCTACTGATCTAAACAC--TGGTATTTTT---- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678271 53 - 18804593 GTGATTCTGCAGCTAA---AAA--T----TTAATATCTACTGATCTAAACAC--TGGTATTTTT---- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13289978 53 + 18905526 GTGATTCTGTGGCTAA---AAA--T----TTAATATCTACTGATCTAAACAC--TGGTATTTTT---- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119003 53 - 72318688 GTGATTCTGTGGGTAA---AAA--T----TTAATATCTACTGATCTAAACGC--TGGTATTTTT---- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455300 53 - 1517660 GTGATTCTGTGGCTAA---AAA--T----TTAATATCTACTGATCTAAACAC--TGGTATTTTT---- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551101 53 + 6513552 GTGATTCTGTGGCTAA---AAA--T----TTAATATCTACGGATCTAAACAC--TGGTATTTTT---- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322457 55 + 117903854 GTGATTTTGAGGCTAA---AAAATA----GTAATATCAGCTGATCTAAACAC--TAGTACATTT---- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509730 54 - 31320352 GTGATTCTGAGGCTAA---CAAA-A----GTAACATCAGCTGATCTAAACAC--TAGTACATTT---- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711722 54 + 2203405 GTGATTCTGAAGCTAA---AAAA-A----GTAATATCAGCTGATCTAAACAC--TAGTACATTT---- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659588 53 - 14941987 GTGATTCTGAGGCTAA---AAA--A----GTAACATCAGCTGATCTAAACAC--TAGTACATTT---- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111881598 58 + 195471971 GTCTTTACAAAAAGAATTTGAA--G----TTAGCGTTTTCTGATCTAAACAATGTAGtattttt---- i mm10.chr1 C 0 I 1 s dasNov3.JH575754 541875 61 - 2150887 TTGTTTTCAAGACTAA---AAA--TAAACTTCCTATTCACTGATCTAAACAC--TAGTGTTTATATTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=4095.000000 s hg38.chr18_GL383571v1_alt 188300 1 + 198278 T s panTro5.chr18 65098351 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217260 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436790 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477865 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s calJac3.chr13 105322512 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509784 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711776 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659641 1 - 14941987 T i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 541936 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881656 1 + 195471971 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e colAng1.NW_012115433v1 3551154 0 + 6513552 C e manLeu1.NW_012106698v1 455353 0 - 1517660 C e chlSab2.chr18 60119056 0 - 72318688 C e cerAty1.NW_012001075v1 13290031 0 + 18905526 C e macNem1.NW_012016688v1 13678324 0 - 18804593 C e macFas5.chr18 63118924 0 - 75711847 C e rheMac8.chr18 57427585 0 + 70235451 C a score=-829.000000 s hg38.chr18_GL383571v1_alt 188301 1 + 198278 -A s mm10.chr1 111881657 1 + 195471971 -a i mm10.chr1 I 1 C 0 s dasNov3.JH575754 541937 1 - 2150887 T- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e calJac3.chr13 105322513 0 + 117903854 C e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3659642 0 - 14941987 C e cebCap1.NW_016107689v1 1711777 0 + 2203405 C e saiBol1.JH378121 19509785 0 - 31320352 C e colAng1.NW_012115433v1 3551154 0 + 6513552 C e manLeu1.NW_012106698v1 455353 0 - 1517660 C e chlSab2.chr18 60119056 0 - 72318688 C e cerAty1.NW_012001075v1 13290031 0 + 18905526 C e macNem1.NW_012016688v1 13678324 0 - 18804593 C e macFas5.chr18 63118924 0 - 75711847 C e rheMac8.chr18 57427585 0 + 70235451 C e nomLeu3.chr4 139477866 0 - 152096393 C e gorGor5.CYUI01014964v1 5436791 0 + 17472758 C e panPan2.chr18 64217261 0 + 77229886 C e panTro5.chr18 65098352 0 + 78221452 C a score=424.000000 s hg38.chr18_GL383571v1_alt 188302 6 + 198278 AAAACA s mm10.chr1 111881658 6 + 195471971 aaaata i mm10.chr1 C 0 I 1062 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e calJac3.chr13 105322513 0 + 117903854 C e dasNov3.JH575754 541938 0 - 2150887 C e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3659642 0 - 14941987 C e cebCap1.NW_016107689v1 1711777 0 + 2203405 C e saiBol1.JH378121 19509785 0 - 31320352 C e colAng1.NW_012115433v1 3551154 0 + 6513552 C e manLeu1.NW_012106698v1 455353 0 - 1517660 C e chlSab2.chr18 60119056 0 - 72318688 C e cerAty1.NW_012001075v1 13290031 0 + 18905526 C e macNem1.NW_012016688v1 13678324 0 - 18804593 C e macFas5.chr18 63118924 0 - 75711847 C e rheMac8.chr18 57427585 0 + 70235451 C e nomLeu3.chr4 139477866 0 - 152096393 C e gorGor5.CYUI01014964v1 5436791 0 + 17472758 C e panPan2.chr18 64217261 0 + 77229886 C e panTro5.chr18 65098352 0 + 78221452 C a score=0.000000 s hg38.chr18_GL383571v1_alt 188308 323 + 198278 AGATTGCATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcccggctaaaacggtgaaaccccgtctctactaaaagtacaaaaaattagccgggcgtagtggcgggcgcctgtggtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e calJac3.chr13 105322513 0 + 117903854 C e dasNov3.JH575754 541938 0 - 2150887 C e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3659642 0 - 14941987 C e cebCap1.NW_016107689v1 1711777 0 + 2203405 C e saiBol1.JH378121 19509785 0 - 31320352 C e colAng1.NW_012115433v1 3551154 0 + 6513552 C e manLeu1.NW_012106698v1 455353 0 - 1517660 C e chlSab2.chr18 60119056 0 - 72318688 C e cerAty1.NW_012001075v1 13290031 0 + 18905526 C e macNem1.NW_012016688v1 13678324 0 - 18804593 C e macFas5.chr18 63118924 0 - 75711847 C e rheMac8.chr18 57427585 0 + 70235451 C e nomLeu3.chr4 139477866 0 - 152096393 C e gorGor5.CYUI01014964v1 5436791 0 + 17472758 C e panPan2.chr18 64217261 0 + 77229886 C e panTro5.chr18 65098352 0 + 78221452 C a score=2548.000000 s hg38.chr18_GL383571v1_alt 188631 1 + 198278 a s rheMac8.chr18 57427585 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118924 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678324 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290031 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119056 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455353 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551154 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e calJac3.chr13 105322513 0 + 117903854 C e dasNov3.JH575754 541938 0 - 2150887 C e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3659642 0 - 14941987 C e cebCap1.NW_016107689v1 1711777 0 + 2203405 C e saiBol1.JH378121 19509785 0 - 31320352 C e nomLeu3.chr4 139477866 0 - 152096393 C e gorGor5.CYUI01014964v1 5436791 0 + 17472758 C e panPan2.chr18 64217261 0 + 77229886 C e panTro5.chr18 65098352 0 + 78221452 C a score=10920.000000 s hg38.chr18_GL383571v1_alt 188632 1 + 198278 a s panTro5.chr18 65098352 1 + 78221452 A i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217261 1 + 77229886 A i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436791 1 + 17472758 A i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477866 1 - 152096393 A i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427586 1 + 70235451 A i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118925 1 - 75711847 A i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678325 1 - 18804593 A i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290032 1 + 18905526 A i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119057 1 - 72318688 A i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455354 1 - 1517660 A i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551155 1 + 6513552 A i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322513 1 + 117903854 A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509785 1 - 31320352 A i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711777 1 + 2203405 A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659642 1 - 14941987 A i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e dasNov3.JH575754 541938 0 - 2150887 C e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=690881.000000 s hg38.chr18_GL383571v1_alt 188633 65 + 198278 aaaaCAAGATTGCA-TTTGATAGGGAGTAATTAACTGCGAATAATAAAAATAAAACCCAATCTCCA s panTro5.chr18 65098353 65 + 78221452 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGAGAATAATAAAAATAAAACCCAATCTCCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217262 65 + 77229886 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCGAATAATAAAAATAAAACCCAATCTCCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436792 65 + 17472758 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCGAATAATAAAAATAAAACCCAATCTCCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477867 65 - 152096393 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCGAATAATACAAATAAAACCCAATCTCCG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427587 65 + 70235451 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCAAATAATAAAAATAAAACACGATCTCCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118926 65 - 75711847 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCAAATAATAAAAATAAAACACGATCTCCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678326 65 - 18804593 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCAAATAATAAAAATAAAACACGATCTCCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290033 65 + 18905526 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCGAATAATAAAAATAAAACACAATCTCCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119058 65 - 72318688 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCAAATAATAAAAATAAAACACAATCTCCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455355 65 - 1517660 AAAACAAGATTGCA-TTTGATAGGGAGTAATTAACTGCGAATAATAAAAATAAAACACAATATCCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551156 65 + 6513552 AAAACAAGATTGCA-TTTGATAGGGAGTaattaactgaaaataataaaaataaaatacaatCTCCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322514 65 + 117903854 AAAACAAGATTGCA-TTTTATGGGGAGTAATTAACTATGGATAATAAAAATAAAACTTAATCTCCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509786 65 - 31320352 AAAACAAGATTGCA-TTTGATGGGGAGTAATTAACTATGGATAATAAACATAAAACATAATCTCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711778 65 + 2203405 AAAACAAGATTGCA-TTTGATGGGGAGTAATTAACTATGGATAATAAAAATAAAACATAATCTCCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659643 65 - 14941987 AAAACAAGATTGCA-TTTGATGGGGAGTAATTAACTATGGATAATAAAAATAAGACATAATCTCCA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 541938 65 - 2150887 AAAACAATGTTGCATTTTGATAAGCAGTAATTATCTGGGAATAA-AATTATAAAATGTAATGTTCA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e proCoq1.NW_012148742v1 1308818 124 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=665397.000000 s hg38.chr18_GL383571v1_alt 188698 63 + 198278 AAAAAGAATAGTTATGTTGTAGAAATATACAGGA--CTTTGATTAGAAGATTAGACATATCTTCA s panTro5.chr18 65098418 63 + 78221452 AAAAAGAATAGTTATGTTGTAGAAATATATAGGA--CTTTGATTAGAAGATTAGACATATCTTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217327 63 + 77229886 AAAAAGAATAGTTATGTTGTAGAAATATATAGGA--CTTTGATTAGAAGATTAGACATATCTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436857 63 + 17472758 AAAAAGAATAGTTATGTTGTAGAAATATACAGGA--CTCTGATTAGAAGATTAGACATATCTTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477932 63 - 152096393 TAAAAGAATAGTTATGTTGTAGAAATATACAGGA--CTTTGATTAGAAGATTAGACATATCTTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427652 63 + 70235451 AAAAAGAATTGTCACGTTGCAGAAGTATACAGAA--CTTTGATTAGAAGATTAGATATATCTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63118991 63 - 75711847 AAAAAGAATTGTCACGTTGCAGAAGTATACAGAA--CTTTGATTAGAAGATTAGATATATCTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678391 63 - 18804593 AAAAAGAATTGTCACGTTGCAGAAGTATACAGAA--CTTTGATTAGAAGATTAGATATATCTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290098 63 + 18905526 AAAAAGAATTGTCACGTTGCAGAAATATACAGAA--CTTTGATTAGAAGATTAGATATATCTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119123 63 - 72318688 AAAAAGAATCGTCAAGTTGCAGAAACACACAGAA--CTTTGATTAGAAGATTAGATATATCTTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455420 63 - 1517660 AAAAAGAATTGTCACGTTGCAGAAATATACAGAA--CTTTGATTAGAGGATTAGATATGTCTTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551221 63 + 6513552 AAAAAGAATCATTATGTTGCAGAAATATACAGAA--GTTTGATTAGAAGATTAAATATATCTTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322579 63 + 117903854 AAAAAGAATAGTTATATTGCAGAAATATACAGGA--CATTGATTAGAATATTTGATATATCTTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509851 62 - 31320352 AAAAAGAAT-GTTACGTTGCAGAAATATACAGGA--TGTTGATTAGAAGATTTGATATACTTTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711843 63 + 2203405 AAAAAGAATAGTTACGTTACAGAAATATACAGGA--TGTGGATTAGAAGATTTGATATATCTTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659708 63 - 14941987 AAAAAGAATAGTTATGTTGCAGAAATATATAGGA--CATTGATTAGAAGATTTGATATATCTTCA i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1308942 63 - 1406956 AAAAATAATGGTTATATTGCAGAAAAATACATGA--TTTTGTTTAGAAGATTAGATATATCTTCA i proCoq1.NW_012148742v1 I 124 I 139 s dasNov3.JH575754 542003 62 - 2150887 -AAAATAGTGGGTGTACTGAAGGAAAAAACAGGGACATTTGTTTAGAAGATCAG--ATATCATGA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=320415.000000 s hg38.chr18_GL383571v1_alt 188761 33 + 198278 CTTCATACATTC------CTACAGAATCATTTTATAGCT s panTro5.chr18 65098481 33 + 78221452 CTTCATACATTC------CTACAGAATCATTTTATAGCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217390 33 + 77229886 CTTCATACATTC------CTACAGAATCATTTTATAGCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436920 33 + 17472758 CTTCATACATTC------CTACAGAATCATTTTCTAGCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139477995 25 - 152096393 CTTCATACATTC------CTACAGAATCAT--------T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427715 33 + 70235451 CTTCATACATTC------CTACAGAATTATTTTATAGCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119054 33 - 75711847 CTTCATACATTC------CTACAGAATTATTTTATAGCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678454 33 - 18804593 CTTCATACATTC------CTACAGAATTATTTTATAGCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290161 32 + 18905526 CTTCATACATTC------CTAC-GAATCATTTTATAGCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119186 33 - 72318688 CTTCATACATTC------CTACAGAATCATTTTATAGCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455483 32 - 1517660 CTTCATACATTC------CTAC-GAATCATTTTATAGCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551284 33 + 6513552 CTTCATACATTC------CTACAGAATCATTTTGTAGCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322642 33 + 117903854 CTTCATACATCC------CTAAAGAATCATTTTATGGCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509913 33 - 31320352 CTTCATATATCC------CTACAGAATCATTTTATGGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711906 33 + 2203405 CTTCATACATCC------CTACAGAATCATTTTATGGCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659771 33 - 14941987 CTTCATACATCC------CTACAGAATCATTTTATGGCT i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 542065 39 - 2150887 ATTTATACATTCACATTTCTAAAGAATTGTTAAATATTT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e proCoq1.NW_012148742v1 1309005 139 - 1406956 I e canFam3.chr1 112362013 200 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=468121.000000 s hg38.chr18_GL383571v1_alt 188794 47 + 198278 TTAAAAA-ATTTTATAACAG-TTTGTAAAACATTTATTTG-TATGCCCAT s panTro5.chr18 65098514 47 + 78221452 TTAAAAA-ATTTTATAACAG-TTTGTAAAACATTTATTTG-TATGCCCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217423 47 + 77229886 TTAAAAA-ATTTTATAACAG-TTTGTAAAACATTTATTTG-TATGCCCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5436953 47 + 17472758 TTAAAAA-ATTTTATAACAG-TTTGTAAAACATTTATTTG-TATGCCCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478020 47 - 152096393 TAAAAAA-TTTTTATAACAG-TGTGTAAAACATTTATTTT-TATGCCCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427748 47 + 70235451 TTAAAAA-TTTTTATAACAG-TTTGTAAAACATTTATTTT-TATGCCCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119087 47 - 75711847 TTAAAAA-TTTTTATAACAG-TTTGTAAAACATTTATTTT-TATGCCCAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678487 47 - 18804593 TTAAAAA-TTTTTATAACAG-TTTGTAAAACATTTATTTT-TATGCCCAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290193 47 + 18905526 TTAAAAA-TTTTTATAACAG-TTTGTAAAACATTTATTTT-TATGCCCAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119219 47 - 72318688 TTAAAAA-TTTTTATAACAG-TTTGTAAAACATTTATTTT-TATGCCCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455515 47 - 1517660 TTAAAAA-TTTTTATAACAG-TTTGTAAAACATTTATTTT-TATGCCCAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551317 47 + 6513552 TTAAAAA-TTTTTATAACAG-TTTTTAAAACATTTATTTT-TATGCCCAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322675 47 + 117903854 TTTAACa-tttttataacat-tttgtaaaatatttatttt-tattCCCAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509946 47 - 31320352 TTTAACA-TTTGTATAACAC-TTTGTAAAATATTTCTTTT-TATTCCCAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711939 48 + 2203405 TTTAACATTTTTTATAACAC-TTTGTAAAATATTTATTTT-TATTCCCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659804 48 - 14941987 TTTAATATTTTTTATAACAC-TTTGTAAAATATTTATTTT-TATTCCCAT i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112362213 49 - 122678785 TTTAAGA-GTTCAATAATGCTTTTGCAAAATATTTATTTTCTCTACCCAT i canFam3.chr1 I 200 I 2 s dasNov3.JH575754 542104 44 - 2150887 -TTGAAA-TTTTTATAACAGCTTTGT---ACCTATTTTTT-TATGTAGAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111881664 1062 + 195471971 I e proCoq1.NW_012148742v1 1309005 139 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=502105.000000 s hg38.chr18_GL383571v1_alt 188841 56 + 198278 AAGATACAGACAAAAGCTG-TAGATGCTCTGTGAA---TTTTTTTTTCTATTTAGGATGC s panTro5.chr18 65098561 56 + 78221452 AAGATACAGACAAAAGCTA-TAGATGCTCTGTGAA---TTTTTTTTTCTATTTAGGATGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217470 56 + 77229886 AAGATACAGACAAAAGCTA-TAGATGCTCTGTGAA---TTTTTTTTTCTATTTAGGATGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437000 55 + 17472758 AAGATACAGACAAAAGCTA-TAGATGCTCTGTGAA----TTTTTTTTCTATTTAGGATGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478067 55 - 152096393 AAGATACAGATAAAAGCTA-TAGATGCTCTGTGAA----TTTCTTTTCTATTTAGGATGC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427795 57 + 70235451 AAGATTCAGAAATATGCTA-TAGATGCTCTGTGAA--TTTTTTTTTTCTCTTTAGGATGC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119134 57 - 75711847 AAGATTCAGAAATATGCTA-TAGATGCTCTGTGAA--TTTTTTTTTTCTCTTTAGGATGC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678534 57 - 18804593 AAGATTCAGAAATATGCTA-TAGATGCTCTGTGAA--TTTTTTTTTTCTCTTTAGGATGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290240 59 + 18905526 AAGATTCAGATATATGCTA-TAGATGCTCTGTGAATTTTTTTTTTTTCTCTTTAGGATGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119266 57 - 72318688 AAGATTCAGAAATATGCTA-TAGATGCTCTGTGAA--ATTTTTTTTTCTCTTTAGGATGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455562 57 - 1517660 AAGATTCAGAAATATGCTA-TAGATGCTCTGTGAA--TTTTTTTTTTCTCTTTAGGATGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551364 57 + 6513552 GAGATTCAGAAATATGCTA-TAGATGCTCTGTGAA--ATTTTTTTTTCTCTTTAGGATGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322722 54 + 117903854 AAGATACAGACAAATGCTA-TAGATGCTCCATGAA----TTTTTTTTTC-TTTAGGATGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19509993 54 - 31320352 AAGATACAGACAAATGCTA-TAGAAGCTCTGTGAA----TTTTTTTTCT-TTTAGGATGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1711987 54 + 2203405 AAGATACAGACAAATGCTA-TAGAAGCTCTGTGAA----TTTTTTTTCT-TTTAGGATGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659852 55 - 14941987 AAGATACAGACAAATGCTA-TAGAAGCTCTGTGAA----TTTTTTTTCTCTTTAGGATGT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111882726 57 + 195471971 aatatatGGTCAAATGTTATTGGATTTTCTGTGGC--ATTTCTTTTAATCTTCAAATAG- i mm10.chr1 I 1062 C 0 s canFam3.chr1 112362264 38 - 122678785 AACATACAGCCAAAGGCTATTGGATGTTCTGAGAA--ATT-------------------- i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 542148 60 - 2150887 AAAATATATCCAAATGCTAGGAAATGCTCTGAGAAATGTGCTGTTTTCTCTTTGGAAAAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309005 139 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=770016.000000 s hg38.chr18_GL383571v1_alt 188897 59 + 198278 CAAAGGTAAGAGGTACATGTATTAGTCTTCATTTCCATCAATATCTATTAAGCATCTAC s panTro5.chr18 65098617 59 + 78221452 CAAAGGTAAGAGGTACATGTATTAGTCTTCATTTCCATCAATATCTATTAAGCATCTAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217526 59 + 77229886 CAAAGGTAAGAGGTACATGTATTAGTCTTCATTTCCATCAATATCTATTAAGCATCTAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437055 59 + 17472758 CAAAGGTAAGAGGAACATGTATTAGTCTTCATTTCCATCAATATCTATTAAGCATCTAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478122 59 - 152096393 CAAAGGTAAGAGGTACATGTATTAGTCTTCATTTCCATCAACATCTATTAAGCATCTAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427852 59 + 70235451 CAAAGGTAAGAGGTACATGTATTAGTCTTAATTTCTATCAATATCTATTAAGCATCTAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119191 59 - 75711847 CAAAGGTAAGAGGTACATGTATTAGTCTTAATTTCTATCAATATCTATTAAGCATCTAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678591 59 - 18804593 CAAAGGTACGAGGTACATGTATTAGTCTTAATTTCTATCAATATCTATTAAGCATCTAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290299 59 + 18905526 CAAAGGTAAAAGGTACATGTATTAGTCTTAATTTCCATCAATATCTATTAAGCATCTAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119323 59 - 72318688 CAAAGGTAAGAGGTACTTGTGTTAGTCTTAATTTCCATCAATATCTATTAAGCATCTGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455619 59 - 1517660 CAAAGGTAAAAGGTACATGTATTAGTCTTAATTTCCATCAATATCTATTAAGCATCTAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551421 59 + 6513552 CAAATGTAAGAGGTACATGTATTAGTCTTAATTTCCATCAATACCTATTAAGCATCTAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322776 59 + 117903854 CAAAGTCAAGAGTTATATGTATTAGtcattatttccatcaatatttattaagcatctac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510047 59 - 31320352 CAAAGACAAGAGGTATATGTATTAGTCATTATTTCCATCAATATCTATTAAGCATCTAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712041 59 + 2203405 CAAAGGCAAGAGGTATATGTATTAGTCATTATTTCCATCAATATTTATTAAGCATCTAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659907 59 - 14941987 CAAAGGCAAGAGGTGTATGTATTAGTCATTATTTCCATCAATATCTATTAAGCATCTAC i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1309144 59 - 1406956 CAAAGGTAATAGGTGCATGCATTAGTTATCATTTCAATCAATATCTATTAAGCATCTAC i proCoq1.NW_012148742v1 I 139 I 61 s mm10.chr1 111882783 48 + 195471971 CAAAGGTATGGAGAA-----------CCTTACCTCATTCAGTATGTACTAGGCATCTGT i mm10.chr1 C 0 C 0 s canFam3.chr1 112362302 57 - 122678785 --AAAGTAAGAGGTAAATTTATTAGCCATTATTTCTATCAGTATCTATTTTGAATCTAC i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 542208 59 - 2150887 CAAATGTGAGAAGTGGGAGTATTAATCAACATTTCAACCACAGTCTTTTAAGTATCTAC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=295980.000000 s hg38.chr18_GL383571v1_alt 188956 27 + 198278 TGGGTG----------TTTTTAGTGTTGGGTTGATGT s panTro5.chr18 65098676 27 + 78221452 TAGGTG----------TTTTTAGTGTTGGGTTGATGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217585 27 + 77229886 TAGGTG----------TTTTTAGTGTTGGGTTGATGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437114 27 + 17472758 TAGGTG----------TTTTTAGTGTTGGGTTGACGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478181 27 - 152096393 TAGATG----------TCTTTAGTGTTGGGCTGATGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427911 27 + 70235451 TAGGTG----------TCTTTAGTGTTGGGCTGGTGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119250 27 - 75711847 TAGGTG----------TCTTTAGTGTTGGGCTGGTGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678650 27 - 18804593 TAGGTG----------TCTTTAGTGTTGGGCTGGTGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290358 27 + 18905526 TAGGTG----------TCTTTAGTGTTGGGCTGGTGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119382 27 - 72318688 TAGGTA----------TCTTTAGTGTTGGGCTGGTGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455678 27 - 1517660 TAGGTG----------TCTTTAGTGTTGGTCTGGTGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551480 27 + 6513552 TAGGTG----------TCTTTAGTGTTGGGCTGATGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105322835 27 + 117903854 taggtg----------tctttagtgttgggCTGCTGT i calJac3.chr13 C 0 I 9591 s saiBol1.JH378121 19510106 27 - 31320352 TAGGTG----------TCTTTAGTGTTGGACTGGTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712100 27 + 2203405 TAGGTG----------TCTTTAGTATTGGGCTGGTGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3659966 27 - 14941987 TAGGTG----------TCTTTAGTGTTGGACTGGTGT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111882831 27 + 195471971 TAAATA----------TGTTTAGTGTTAAACTGAAGT i mm10.chr1 C 0 C 0 s canFam3.chr1 112362361 25 - 122678785 TATGTG----------CTTCT--TGTCAGGCTGAATT i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 542267 35 - 2150887 -AGGTGCTCTGCTTCATGCTTAGTATTGAGTTGAGT- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309203 61 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=361158.000000 s hg38.chr18_GL383571v1_alt 188983 31 + 198278 ATAAAATTACCCATGTTAGAAGA-TACTGAAC s panTro5.chr18 65098703 31 + 78221452 ATAAAATTACCCATGTTAGAAGA-TACTGAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217612 31 + 77229886 ATAAAATTACCCATGTTAGAAGA-TACTGAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437141 31 + 17472758 ATAAAATTACCCATGTTTGAAGA-TACTGAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478208 31 - 152096393 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427938 31 + 70235451 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i rheMac8.chr18 C 0 I 3 s macFas5.chr18 63119277 31 - 75711847 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i macFas5.chr18 C 0 I 3 s macNem1.NW_012016688v1 13678677 31 - 18804593 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i macNem1.NW_012016688v1 C 0 I 3 s cerAty1.NW_012001075v1 13290385 31 + 18905526 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i cerAty1.NW_012001075v1 C 0 I 3 s chlSab2.chr18 60119409 31 - 72318688 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i chlSab2.chr18 C 0 I 3 s manLeu1.NW_012106698v1 455705 31 - 1517660 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i manLeu1.NW_012106698v1 C 0 I 3 s colAng1.NW_012115433v1 3551507 31 + 6513552 ATAAAATTACCCATGTTTGAAGA-TATTGAAC i colAng1.NW_012115433v1 C 0 I 3 s calJac3.chr13 105332453 31 + 117903854 ataaaatTACCCATGTTTGAATA-TATTGGGC i calJac3.chr13 I 9591 I 3 s saiBol1.JH378121 19510133 31 - 31320352 ATAAAATTACCCATGTTTGAATA-TATTGGAC i saiBol1.JH378121 C 0 I 3 s cebCap1.NW_016107689v1 1712127 32 + 2203405 ATAAAATTACCCATGTTTGAATATTATTGGAC i cebCap1.NW_016107689v1 C 0 I 3 s aotNan1.NW_018502140v1 3659993 31 - 14941987 ATAAAGTTACCCATGTTTGAATA-TATTGGAC i aotNan1.NW_018502140v1 C 0 I 3 s mm10.chr1 111882858 27 + 195471971 ATAACATAACTCTTATTTGAACA-CATC---- i mm10.chr1 C 0 C 0 s canFam3.chr1 112362386 31 - 122678785 ATAAAATGACCCATATTTAAAGT-TATAGGAC i canFam3.chr1 C 0 I 3 s dasNov3.JH575754 542302 31 - 2150887 ATAAAGTGATACATACATGAAGA-CAAAGGAC i dasNov3.JH575754 C 0 I 3 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309203 61 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=466357.000000 s hg38.chr18_GL383571v1_alt 189014 36 + 198278 AAGTGTTAA-------ATCACTTGATAAA-AACATCCAGAAAGT s panTro5.chr18 65098734 36 + 78221452 AAGTGTTAA-------ATCACTTGATAAA-AACATCCAGAAAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217643 36 + 77229886 AAGTGTTAA-------ATCACTTGATAAA-AACATCCAGAAAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437172 36 + 17472758 AAGTGCTAA-------ATCACTTGATAAA-AACATACAGAAAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478239 36 - 152096393 AAGTGCTAA-------ATCACTTGATAAA-AACATCCAGAAAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57427972 36 + 70235451 AAGTGCTGA-------ATCACTTGATAAA-AACATCCAGAAAGT i rheMac8.chr18 I 3 C 0 s macFas5.chr18 63119311 36 - 75711847 AAGTGCTGA-------ATCACTTGATAAA-AACATCCAGAAAGT i macFas5.chr18 I 3 C 0 s macNem1.NW_012016688v1 13678711 36 - 18804593 AAGTGCTGA-------ATCACTTGATAAA-AACATCCAGAAAGT i macNem1.NW_012016688v1 I 3 C 0 s cerAty1.NW_012001075v1 13290419 36 + 18905526 AAGTGCTGA-------ATCACTTGATAAA-AACATCCAGAAAGT i cerAty1.NW_012001075v1 I 3 C 0 s chlSab2.chr18 60119443 36 - 72318688 AATTGCTGA-------ATCACTTGATAAA-AACATCCAGAAAGT i chlSab2.chr18 I 3 C 0 s manLeu1.NW_012106698v1 455739 36 - 1517660 AAGTGCTGA-------ATCACTTGATAAA-AACATCCAGAAAGT i manLeu1.NW_012106698v1 I 3 C 0 s colAng1.NW_012115433v1 3551541 36 + 6513552 AAGTGCTAA-------ATCACTTGATAAA-AACATCCAGAAAGG i colAng1.NW_012115433v1 I 3 C 0 s calJac3.chr13 105332487 36 + 117903854 AGGTGCTAA-------ATCACTTGGAAAA-AGCATTCAGAAAGT i calJac3.chr13 I 3 C 0 s saiBol1.JH378121 19510167 36 - 31320352 AGGTGCTAA-------ATCACTTGGAAAA-AACATCCAGAAAGT i saiBol1.JH378121 I 3 C 0 s cebCap1.NW_016107689v1 1712162 36 + 2203405 AGGTGCTAA-------ATCACTTGGAAAA-AATATCCAGAAAGT i cebCap1.NW_016107689v1 I 3 C 0 s aotNan1.NW_018502140v1 3660027 36 - 14941987 AGGTGCTAA-------ATCACTTGGCAAA-AACATCTAGAAAGT i aotNan1.NW_018502140v1 I 3 C 0 s proCoq1.NW_012148742v1 1309264 37 - 1406956 AAGTGCTGA-------ATTACTTGATAAATAACACCCAGAAAGT i proCoq1.NW_012148742v1 I 61 C 0 s mm10.chr1 111882885 43 + 195471971 AGGTATTGAGACCTGGACAGCTTTATAAA-ATCACATAGAAGTT i mm10.chr1 C 0 C 0 s canFam3.chr1 112362420 37 - 122678785 AAGTGCAGA-------ATCACTTGATAAAAAACACCTATAAAGT i canFam3.chr1 I 3 C 0 s dasNov3.JH575754 542336 37 - 2150887 AAGTGCTGA------AACCTCCTCATGAA-AACACCCAGAAAGC i dasNov3.JH575754 I 3 I 193 e micMur3.chr19 41564803 337 + 83067054 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=2137449.000000 s hg38.chr18_GL383571v1_alt 189050 154 + 198278 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACTTTGATTAAATTGATTCATTAATTTAAACTACTAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAAGATT-TTTGATTAAGTAATTCTAACCATTCAATCATG s panTro5.chr18 65098770 154 + 78221452 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACTTTGACTAAATTGATTCATTAATTTAAACTACTAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAAGATT-TTGGATTAAGTAATTCTAACCATTCAATCATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217679 154 + 77229886 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACTTTGACTAAATTGATTCATTAATTTAAACTACTAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAAGATT-TTGGATTAAGTAATTCTAACCATTCAATCATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437208 154 + 17472758 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACTTTGACTAAATTGATTCATTAATTTAAATTACCAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAAGATT-TTGGATTAAGTAATTCTAACCATTCAATCATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478275 154 - 152096393 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACTTTGACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAAGATT-TTGGATTAAGTAATTCTAACCATTCAATCATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428008 154 + 70235451 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACCTTGACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------CTTTTCATTGTTGAATGGAAAGGATT-TTGAATTAAGTAATTCTAACCATTCTATCATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119347 154 - 75711847 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACCTTGACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------CTTTTCATTGTTGAATGGAAAGGATT-TTGAATTAAGTAATTCTAACCATTCAATCATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678747 154 - 18804593 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACCTTGACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------CTTTTCATTGTTGAATGGAAAGGATT-TTGAATTAAGTAATTCTAACCATTCAATCATG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290455 154 + 18905526 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACCTCAACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAGGATT-TTGAATTAAGTAATTCTAACCGTTCAATCATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119479 154 - 72318688 TTCAT-GGAAACTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACCTTGACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAGGATT-TTGAATTAAGTAATTCTAACCATTCAATCATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455775 154 - 1517660 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTTACCTTGACTAAATTGATTCATTAATTTAAACTACCAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAGGATT-TTGAATTAAGTAATTCTAACCATTCAATCATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551577 153 + 6513552 TTCAT-GGACGCTGGACACT-CGACTTT-ATTCTAGATGGGTTTCACTTACCTTGACTAAATTGATTCATTAATTTAAACTGCCAATCTGTCTGAATT--------GTTTTCATTGTTGAATGGAAAGGGTT-TTGGATTAAGTAATTCTAACCATTCAATCATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105332523 153 + 117903854 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTAACTTTAACTGAATTGATTCACTAATTTAAACTACTAATCTAACTGAATT--------GTTTTCACTACTGAATGAAAAAGATT-TTGGATTAAA-AATTCTAATCATTCAATCATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510203 154 - 31320352 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCACTAACTTTAACTGAATTGATTCACTAATTTAAACTACCAATCTAACTGAATT--------GTTTTCACTATGGAATGAAAAAGATT-TTGGATTAAGTAATTCTAATCATTCAATCATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712198 154 + 2203405 TTCAT-GGAAGCTGGATACTCCAACTTT-ATTCTAGATGGGCTTCATTAACTTTAACTGAATTGATTCACTAATTTAAACTACCAGTCTAACTGAATT--------GTTTTCACTATTGAATGAAAAAGATT-TTGGATTAAGTAATTCTAATCATTAAATCATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3660063 154 - 14941987 TTCAT-GGAAGCTGAATACTCCAACTTT-ATTCTAGATGGGCTTCACTAACTTTAACTGAATTGATTCACTAATTTAAACTACCAATCTAACTGAATT--------GTTTTCACTATTGAATGAAAAAGATT-TTGGATTAAGTAATTCTAATCATTCAATCATG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1309301 155 - 1406956 TTCAT-GGAAACTGGATATTCTAACTTCAATTTTAGATGGGCTTCACTAACTTTGACTATACTGATTCATTAATTTAAACTATCAGTCTGACTGAATT--------GTTTCCACTGTTGAATGGAAAAGATT-TTGGATTAAGTAGTTCTAATCATTCAATTATG i proCoq1.NW_012148742v1 C 0 I 4635 s mm10.chr1 111882928 160 + 195471971 TTCAC-GAACATTGCATA-TCCGTCTTG-GTTTTAGATGGGGTTCATTGACTTTTTCTAAATTGACTCATTGATTTAAAGGACCAATGTGATTGATTTTTTTTTTCTTTTTCTCTGATGAGTGGAACAGATCGCTGTATT--GCAGCTCTGATCATTTAGTCATG i mm10.chr1 C 0 C 0 s canFam3.chr1 112362457 151 - 122678785 TTGATGGGAAACTGAATATCCTAATTTT-ATTCCAGATAAGGCTCACTAACTTTGACTAAATTGACTCATTAATTTAAACTAACAATCTGACTGAATA--------TTTTTCACTGTTGAATGGAACAGACT-TTGGACT----AGTTCTAATCATTCAGTCATG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 542566 154 - 2150887 TTCAT-GGAGATTGTATTTTCTGACTTG-ATTCTAGATGGTCCTCACTAACTTTGACTGAACTAACTCATTGATTTAAACTAATAATCTGACTGAATG--------TTTTTTCATGATGAATGCAACAGATT-TTGGATTAAACAGTTCAAAGCTTTCCACCATG i dasNov3.JH575754 I 193 C 0 e micMur3.chr19 41564803 337 + 83067054 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1317963.000000 s hg38.chr18_GL383571v1_alt 189204 113 + 198278 CATGACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATCTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTGACTACTGCATTATTGATTGTTTTCTGATGTTTCA s panTro5.chr18 65098924 113 + 78221452 CATGACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTGACTACTGCATTATTGATTGTTTTCTGATGTTTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217833 113 + 77229886 CATGACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTGACTACTGCATTATTGATTGTTTTCTGATGTTTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437362 115 + 17472758 CATAACAAGCGAC----ATAAATTAGATTAT-------ATATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTGACTACTGCATTATTGATTGTTTTCTGATGTTTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478429 113 - 152096393 CATAACAAATGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTGACTATTGCATTATTGATTATTTTCTGATGTTTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428162 113 + 70235451 CATAACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTAACTATTGCATTATTGATTGTTTTCTGATGTTTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119501 113 - 75711847 CATAACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTAACTATTGCATTATTGATTGTTTTCTGATGCTTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13678901 113 - 18804593 CATAACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTAACTATTGCATTATTGATTGTTTTCTGATGTTTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290609 113 + 18905526 CATAACAAGTGAC----ATAAATTACAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTAACTATTGCATTATTGATTGTTTTCTGATGTTTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119633 113 - 72318688 CATAACAAGTGAG----ATAAATTAGAT--T-------TTATATATACA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTAACTATTGCATTATTGATTGTTTTCTGATGTTTCA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 455929 113 - 1517660 CATAACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTAACTATTGCATTATTGATTGTTTTCTGATGTTTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551730 113 + 6513552 CATAACAAGTGAC----ATAAATTAGAT--T-------TTATATATATA----GCATGTTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAGTCTAACTATTGCATTATTGATTGTTTTCTGATGTTTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105332676 111 + 117903854 CATAACAAGCAAT----ATGAATTAGGT--T-------TTATATATATA----GCCTA--TT----------------------------ATTAAATTTTCAACTATAACTACTACTCAATCTGACTATTGCATTATTAATTGTTTTCTGATATTTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510357 113 - 31320352 CATAACAAGCAAT----ATAAATTACGT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAATCTGACTACTGCATTATTAATTGTTTTCTGATATTTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712352 113 + 2203405 CATAACGCATGAT----ATAAATTACAT--T-------TTATATATATA----GCATATTTT----------------------------ATTAAATTTTCAATTTTAACTACTACTCAATCTGACTATTGCATTATTAATTGTTTTCTGATATTTCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3660217 109 - 14941987 CATAACAAGCAAT----ATAAATTAGGT--T-------TTATATATATA----GTATATTTT----------------------------ATTAAATTTTCAATTATAACTACTACTCAAT----CTATTGCATTATTAATTGTTTTCTGATATTTCA i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111883088 106 + 195471971 -----CAAGGAACCCATGGAAGTTAGAT--T-------TTATATAT----------TATCTTGTA-------------------------ACTAAACTATCAGTTATAACTACTACCCAATGTG---ATTGTATTGGTGTTCAATTTTGGATGTTTCA i mm10.chr1 C 0 I 900 s canFam3.chr1 112362608 151 - 122678785 TATACCAAACAAT----ATAAATTAGGt--tatatttactatatatataaaatgtatattttatatCATATGTTACTACTTATACTTATTATTAGAATGTCCATTATAAC-ACTACCCAACCAGAACATTGCATTACTGATTATTTTCTGATGTTTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 542720 106 - 2150887 TCTCCCAAG-AAT----ATAACAGAGAT--C-------ACATATAT----------TATCTT----------------------------ATTGAGTTATCAATTATAACTACTATGTTATCTGACTATTGCACTATTGGTTGTTTCCTGATGTTTCA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=576707.000000 s hg38.chr18_GL383571v1_alt 189317 60 + 198278 GAAACACCAGAGACAAGTTATGTCCAATGACTAACTTTTATATTTGTTTAACACTTTTTA s panTro5.chr18 65099037 59 + 78221452 GAAACACCAGAGACAAGTTATGTCCAATGACTAACTTTT-TATTGGTTTAACACTTTTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64217946 59 + 77229886 GAAACACCAGAGACAAGTTATGTCCAATGACTAACTTTT-TATTGGTTTAACACTTTTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437477 60 + 17472758 GAAACACCAGAGACAAGTTATGTCCAATGACTAACTTTTATATTGGTTTAACACTTTTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478542 60 - 152096393 GAAACACCAGAGACAAGTTATGTCCAATGACTAACTTTTATATTGGTTTAACACTTTTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428275 60 + 70235451 GAAACACCAGAGACAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTTTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119614 60 - 75711847 GAAACACCAGACACAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTTTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679014 60 - 18804593 GAAACACCAGAGACAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTTTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290722 60 + 18905526 GAAACACCATAGATAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTCTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119746 60 - 72318688 GAAACACCAGAGACAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTCTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456042 60 - 1517660 GAAACACCATAGACAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTCTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551843 60 + 6513552 GAAACACCAGAGACAAGTTATGTCCAATGGCTAACTTTTATATTGATTTAACACTTTTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105332787 59 + 117903854 GAAACATCAGAGACACGTTATGTGTAATGGGTAACTTTTATGTTGATTTAGCACTTTTT- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510470 59 - 31320352 AAAACATCAGAGACAAGTTATGTCTAATGGCTAACTTTTATGTTGATTTGGCACTTTTT- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712465 59 + 2203405 GAAATATCAGAGACAAGTTATGTCTAATGGCCAACTTTTATGTTGATTTAGCACTTTTT- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3660326 59 - 14941987 GAAACATCAGAGACAAGTTATGTCTAATGGCTAACTTTTATGTTGATTTAGCACTTTTT- i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112362759 40 - 122678785 ----------------ATGTTGCCAAATGG----CTTTTATATTGGTTTAGCAATATTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 542826 43 - 2150887 ----------------ATATTTTCATATGGAAAACTTTGATATTGATTTCATAATTCTA- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111883194 900 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1603167.000000 s hg38.chr18_GL383571v1_alt 189377 137 + 198278 AAATAAGATTTAAATGAATTGAATAAAAATATATAGGCCAATTTTGAGTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------TCAG--TTTTGTATTTAAAATACATATTCATAATGTATACAGAA--- s panTro5.chr18 65099096 137 + 78221452 AAATAAGATTTAAATGAATTGAATAAAAATATATAGGCCAATTTTGAGTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------TCAG--TTTTGTATTTAAAATACATATTCATAATGTATACAGAA--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218005 137 + 77229886 AAATAAGATTTAAATGAATTGAATAAAAATATATAGGCCAATTTTGAGTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------TCAG--TTTTGTATTTAAAATACATATTCATAATGTATACAGAA--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437537 137 + 17472758 AAATAAGATTTAAATGAATTGAATAAAAATATATAGGCCAATTTTGAGTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------TCAG--TTTTGTATTTAAAATACATATTCATAATGTATACAGAA--- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478602 137 - 152096393 AAATAAGATTTAAATGAATTGAATAAAAATATGTAGGCCAATTTTGAGTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------TCAG--TTTTGTATTTAAAATACATATTCATAATGTGTACAGAA--- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428335 137 + 70235451 AAATAAGATTTAAATGAATTGAATAAAAATATGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATGCATATTCATAATATATACAGAC--- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119674 137 - 75711847 AAATAAGATTTAAATGAATTGAATAAAAATATGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATGCATATTCATAATATATACAGAC--- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679074 137 - 18804593 AAATAAGATTTAAATGAATTGAATAAAAATATGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATGCATATTCATAATATATACAGAC--- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290782 137 + 18905526 AAATAAGACTTAAATGAATTGAATAAAAATGTGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATGCATATTCATAATGTGTACAGAC--- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119806 137 - 72318688 AAATAAGATTTAAATGAATTGAATAAAAATATGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATTTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATGCATATTCATAATATATACAGAC--- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456102 137 - 1517660 AAATAAGACTTAAATGAATTGAATAAAAATGTGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATGCATATTCATAATGTATACAGAC--- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3551903 137 + 6513552 AAATAAGATTTAAATGAATTGAATAAAAATATGTAGACCAATTTTGACTTACAAGACAAATTTAATTTGAAAACTATCTTTGAAAATCAGAATAG------CCAG--TTTTGTATTTAAAATACATATGTATAATATATACAGAC--- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105332846 137 + 117903854 AAATAAGTTTTACATGAATTGAATAAAACTATATAGGCCAATTTTGAGTTACAGAACAAATTTAATTTGAAAACTATCTTTGAAAATCTGAATAG------CCAG--TTTTGTATTTAAAATACATATTCATAATGTATATAGAA--- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510529 137 - 31320352 AAATAAGGTTTACATGAATTGAATAAAAATATCTAGGCCAATTTTGAGTTACAGAACAAATTTAATTTGAAAACTATCTTTGAAAATCTGAATAG------CCAG--TTTTGTATTTAAAATACGTATTCATAACGTATATAGAA--- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712524 137 + 2203405 AAATAAGGTTTACATGAATTGAATAAAAATATATAGGCCAATTTTGAGTTACAGAACAAATTAAATTTGAAAACTCTCTTTGAAAATCTGAATAG------CCAG--TTTTGTATTTAAAATACATATTCATAATGTATATAGAA--- i cebCap1.NW_016107689v1 C 0 I 331 s aotNan1.NW_018502140v1 3660385 136 - 14941987 AAATAAGGTTTACATGAATTGAATAAAAATATATAGGCCAATTTTGAGTTACAGAACAAATTTAATTTGAAAACTATCTTTG-AAATCTGAACAG------CCAG--TTTTGTATTTAAAATACATATTCATAATGTATATAGAA--- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111884094 114 + 195471971 AAGTAAGAACCAAATG----------AAATATATGGA-CAATTTTAAC-TATATAAC-ATTCTTATTTGAAAATTTCATTAGAAGAT---ATTAG------CATT--CTTTACAGGTAA-------ATTCACAAGTCAGACAAAA--- i mm10.chr1 I 900 C 0 s canFam3.chr1 112362799 136 - 122678785 -AACAAGAATTAAATGAGTTGAATAAAAAAAAGATGGCCAATTTCAAATTAGATAACAGATTTAATTTGAAAACTATCTTTGTAAATCAGATTAG------CCAG--TTTTATATTTAAAATACATACTTTTATTGTATATGGAA--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 542869 146 - 2150887 ATATATGAATTAGAGGAACTAAATAAGAATACAT-GGCCGATTTTGAATTACATGAAAAACTTAATTTGAAAAGTACCTTTTAAAACCAGATAAGTGTAAACCAGATTTTTACACTTAAAATA-ACACTTTTACTGTATATAAAATTA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=178762.000000 s hg38.chr18_GL383571v1_alt 189514 25 + 198278 ATTATT----CAATTCACTG---------TG----ACAGGAC--------- s panTro5.chr18 65099233 29 + 78221452 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218142 29 + 77229886 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437674 29 + 17472758 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478739 29 - 152096393 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428472 29 + 70235451 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119811 29 - 75711847 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679211 29 - 18804593 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290919 29 + 18905526 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119943 29 - 72318688 AGTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456239 29 - 1517660 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552040 29 + 6513552 ATTATTTATTCAATTCACTG---------TG----ACAGGAC--------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105332983 23 + 117903854 ATTAT----TCAGTGCACCA---------TG----ATGGA----------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510666 24 - 31320352 ATTATTTACTCAATGCACCA---------TG----AT-------------- i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3660521 23 - 14941987 ATTAT----TCAATGCACCA---------TG----ATGAC----------- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111884208 27 + 195471971 -----------AAGACACTGTCAAACTTCTG----GTAGCAA--------- i mm10.chr1 C 0 I 3 s canFam3.chr1 112362935 32 - 122678785 -TTATTTCATTAATCAACTG---------TACTTTAAAGGAC--------- i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 543015 34 - 2150887 ----TTTACTCAATCTACTA---------TG----GTAAATTCTGATAAAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I e cebCap1.NW_016107689v1 1712661 331 + 2203405 I a score=1563383.000000 s hg38.chr18_GL383571v1_alt 189539 154 + 198278 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATACATTCTTGATAGAATTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTGATA----------AAAA-- s panTro5.chr18 65099262 122 + 78221452 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATATATTCTTGATAGAACTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATC------------------------------------------------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218171 154 + 77229886 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATATATTCTTGATAGAACTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTGATA----------AAAA-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437703 152 + 17472758 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATATATTCTTGATAGAATTTGAATAGAAGATA-GAAATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTGAT------------AAA-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478768 153 - 152096393 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATATATACTTGATAGAATTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTGAC-----------AAAA-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428501 152 + 70235451 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTCCTTAAACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTAAT------------AAA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119840 152 - 75711847 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTCCTTAAACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTAAT------------AAA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679240 152 - 18804593 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTCCTTAAACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTAAT------------AAA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13290948 152 + 18905526 ATTTA-TT-TTACA--ACCAGGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTAAT------------AAA-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60119972 154 - 72318688 ATTTATTT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTCCTTAAACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATG-G----AAGCAGTGATCTAAT-----------AAAA-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456268 152 - 1517660 ATTTA-TT-TTACA--ACCAGGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTACTTAAACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTAAT------------AAA-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552069 152 + 6513552 ATTTA-TT-TTACA--ACCATGATTATAA--A--TATTAATTTTAAAATTA----------ATGTACTGGTTAGACAAGATATATACTTGATAGACTTTGAATAGAAGATA-GAGATTGCAATATATTAATCTTACATATCCCACTAAGATC-A----AAGCAGTGATCTAAT------------AAA-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333006 158 + 117903854 ATTTA-TT-TTACA--ACCATGATTATGA--A--TATTAATTTTAAAATTCA--GAGACATATGTACTACTTAAACAAGATACATACTTGATAGAATTTGAATGGAAGATT-GATATTGCAATATATTAATTTTACATATTCCACTAATTTC------AAGCAGTGATAAAAT-------------AA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510690 158 - 31320352 ATTTA-TT-TTGCA--ACCATCATTATGA--A--TATTCATTTTAAAATTCA--GAGGAGTATGTACTACTTAAACAAGATATATACTTGATAGAATTTGAATGGAAGATA-GATATTGCAATATATTAATTTTACATATTCCACTAAGATC------AAGCAGTGATCTAAT-------------AA-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1712992 156 + 2203405 ATTTA-TT-TTACA--ACCATCATTATGA--A--TATTAATTTTAAAATTCA--GAAGAGTATGTACTACTTAAACAAGAT--ATGCTTGATAGAATTTGAATGGAAGATA-GATATTGCAATTTATTAATTTTACATATTCCACTAAGATC------AAGCAGTGATCTAAT-------------AA-- i cebCap1.NW_016107689v1 I 331 C 0 s aotNan1.NW_018502140v1 3660544 158 - 14941987 ATTTA-TT-TTACA--ACCATGATTATGA--A--TATTAATTTTAAAATTCA--GAGGAGTATGTACTACTTAAACAAGATATATACTTGATAGAATTTGAATGGAAGATA-GATATTGCAATATATTAATTTTACGTATTCCACTAAGATC------AAGCAGTGATCTAAT-------------AA-- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111884238 164 + 195471971 --TTC-TT-TAGCATGGCCATGACTGTGAGTA--TATATACACCAAAATTAG--GGAATATATGTGTAATTTAAACAGGACATACATTTTATGCAATTTGAATACATGATA--ACATAACAAAATACCAATCTTAC-TATCCCATCAAAATT-ACTGTATGCAGTGATTGCAT------------AAA-- i mm10.chr1 I 3 I 8298 s canFam3.chr1 112362968 176 - 122678785 CTTTA-CTATTTCA--ATCATAATTGTTA--AATTATGAATATCAAAATTAA--GAAGAGTATGGATTACTTAAACACAATATATACTTTATAGAATTTGAATGGAAGATA-GAATTTGCAAAAAATTAATCCTGCATACTCCAAGAATATTGA----AGGCAATGATCTAAAATATTTTTGATGAAA-- i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 543049 168 - 2150887 ATCAC-TA-TTACA--ATGATGATTGTTA--AATTGTGAAAATCAAAAGTGAGTGTGGTGCAAGTATTATTTAAACAAGACATTCACTTTATAATATTTGAATGGAAGATAAGAGTTTGCAAGAAATTAATATTACACATCCCACTAAGATCAA----AGGCATTGATCTAGT------------AGAAA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=80834.000000 s hg38.chr18_GL383571v1_alt 189693 12 + 198278 AAAAAGTATTGT------ s panPan2.chr18 64218325 12 + 77229886 AAAAAGTATTGT------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437855 12 + 17472758 AAAAAGTATTAT------ i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478921 12 - 152096393 AAAAAGCATTAT------ i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428653 11 + 70235451 AA-AAGTATTAT------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63119992 12 - 75711847 AAGAAGTATTAT------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679392 12 - 18804593 AAAAAGTATTAT------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13291100 12 + 18905526 AAAAAGTATTAT------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60120126 12 - 72318688 AAAAAGTATTGT------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456420 12 - 1517660 AAAAAGTATTAT------ i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552221 12 + 6513552 AAAAAGTATTAT------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333164 12 + 117903854 AAAAGATATTAT------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510848 12 - 31320352 AAAAGGTATTAT------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1713148 12 + 2203405 AAAAGGTATTAT------ i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3660702 12 - 14941987 AAAAGGTATTAT------ i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112363144 10 - 122678785 --ACACTTTTTT------ i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 543217 12 - 2150887 ------TTTTAATTTTTT i dasNov3.JH575754 C 0 I 3 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111884402 8298 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I e panTro5.chr18 65099384 0 + 78221452 C a score=4283584.000000 s hg38.chr18_GL383571v1_alt 189705 396 + 198278 AACTCTTTTGACTTGCCCTGTACTTATTTAG---AAAAAAAAATCAGTTTTG-AAATGCAAAAAC-CATATAGGTAAAAC--ATTATTACAATCAACTTGCTTGTTGATAACACTGACATCTTGACT-AA--AAAGATAAAATGTTTCTTATGTCAATTTGGTAGCAATTTTACTCCTGTAGAAAATGGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATATGTACCCACTACACTATATCATCTTGATCTAGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATtcaggatctgccctccaaagttaatgacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg s panTro5.chr18 65099384 376 + 78221452 --------------------TACTTATTTAG---AAAAAAAAATCAGTTTTG-AAATGCAAAAAC-CATATAGGTAAAAC--ATTATTACAATCAACTTGCTTGTTGATAACACTGACATCTTGACT-AA--AAAGATAAAATGTTTCTTATGTCAATTTGGTAGCAATTTTACTCCTGTAGAAAATGGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATATGTACCCACTACACTATATCATCTTGATCTGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGAAACCTATtcaggatctgccctccaaagttaatgacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218337 396 + 77229886 AACTCTTTTGACTTGCCCTCTACTTATTTAG---AAAAAAAAATCAGTTTTG-AAATGCAAAAAC-CATATAGGTAAAAC--ATTATTACAATCAACTTGCTTGTTGATAACACTGACATCTTGACT-AA--AAAGATAAAATGTTTCTTATGTCAATTTGGTAGCAATTTTACTCCTGTAGAAAATGGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATATGTACCCACTACACTATATCATCTTGATCTGGAA-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGAAACCTATtcaggatctgccctccaaagttaatgacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5437867 396 + 17472758 AACTCTTTTGACTTGCCCTGTACTTATTTAG---AAAAAAAAATCAGTATTG-AAATGCAAAAAC-CATACAGGTAAAAC--ATTATTACAATCAGCTTGCTTGTTGATAACACTGACATCTTGACT-AA--AAAGATAAAATGTTTCTTATGTCAATTTGGTAGCAATTTTACTCCTGTAGAAAATGGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATATGTATCCACTACACTATATCATCTTGATCTGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGAAACCTATtcaggatctgccctccaaagttaatgacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139478933 396 - 152096393 GACTCTTTTGACTTGCCCTGTACTTATTTAG---AAAAAAAAATCAGTTTTG-AAATGCAAAAAC-CATATATGTAAAAC--ATTATTACAATCAACTTGCTTGTTGATAACACTGACATCTTGACT-AA--AAAGATAAAATGTTTCTTATGTCAATTTGGTAGCAATTTTACTCTTGTAGAAAGTGGCTGTGACTCACTGGTCAGGCCATTATTGAGTATGCAGGGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATATGTACCCACTACAGTATATCATCTTGATCTGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGAAACCTATtcaggatctgccctccaaagttaaagacaaagtgcaagtccttatgattctcaccacttacaatgatgcatgaagactgg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57428664 407 + 70235451 AACTCTTTTGACTTGCCCTTTACTTATTTAGAAAAAAAAAAAATCAGTGTTG-AAATGCAAAAATAAATGTAGGTAAAAC--ATTATTATAATCAACTTGCTTTTTGATAACACTGACATCTTGACT-AA--GAAGATAAAATGTTTCTTATGTCCATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--GTTTTCTCAGCATCCTACAGAATCTTATACGTACCCACTACAGTGTATCATCTTGATATACTGA-----TGATATA------------------------------------------------------TGCATTAAACATGAAATTTCAGGAACCTATtcaggatctgccctccaaagttaaagacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63120004 405 - 75711847 AACTCTTTTGACTTGCCCTTTACTTATTTAG--AAAAAAAAAATCAGTGTTG-AAATGCAAAAATAAATGTAGGTAAAAC--ATTATTATAATCAACTTGCTTTTTGATAACACTGACATCTTGACT-AA--GAAGATAAAATGTTTCTTATGTCCATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--GTTTTCTCAGCATCCTACAGAATCTTATACGTACCCACTACAGTGTATCATCTTGATATACTGA-----TGATATA------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATtcaggatctgccctccaaagttaaagacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679404 406 - 18804593 AACTCTTTTGACTTGCCCTTTACTTATTTAG-AAAAAAAAAAATCAGTGTTG-AAATGCAAAAATAAATGTAGGTAAAAC--ATTATTATAATCAACTTGCTTTTTGATAACACTGACATCTTGACT-AA--GAAGATAAAATGTTTCTTATGTCCATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--ATTTTCTCAGCATCCTACAGAATCTTATACGTACCCACTACAGTGTATCATCTTGATATACTGA-----TGATATA------------------------------------------------------TGCATTAAACATGAAATTTCAGGAACCTATtcaggatctgccctccaaagttaaagacaaagtgcaagtccttatgattctcaccacttataatgatgcatgaagactgg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13291112 396 + 18905526 AACTCTTTTGACTTGCCCTTTACTGATTTAG--AAAATAAAAATCAGTGTTG-AAATGCAAAAAC-CATATAGGTAAAAC--ATTATTATAATCAACTTGCTTTTTGATAACACTGACATCTTGACT-AA--GAAGATAAAATGTTTCTTATGTCCATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--GTTTTCTCAGCATCCTACAGAATCTTATACGTACCCACTACAGTATATCATCTTGATATGGAG-------------------------------------------------------------------TGCATGAAACATGCAATTtcaggaacctatccaggatctgccctccaaagttaaagacaaagtgcaaatccttatgattctcaccacttataatgatgcatgaagactgg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60120138 396 - 72318688 AACTCTTTTGACTTGCCCTTTACTTATTTAG--AAAATAAAAATCAGTGTTG-AAATGCAAAAAC-CATATAAGTAAAAC--ATTATTATAATCAACTTGCTTTTCGATAACACTGACATCTTGACT-AA--GAAGGTAAAATGTTTCTTATGTCCATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGGCTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--GTTTTCTCAGCATCCTACAGAATCTTATATGTACCCACTACAGTATATCATCTTGATATGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATtcaggatctgccctccaaagttaaagacaaagtgcaagtcctcatgattctcaccacttataatgatgcatgaagactgg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456432 396 - 1517660 AACTCTTTTGACTTGCCCTTTACTGATTTAG--AAAATAAAAATCAGTGTTG-AAATGCAAAAAC-CATATAGGTAAAAC--ATTATTATAATCAACTTGCTTTTTGATAACACTGACATCTTGACT-AA--GAAGATAAAATGTTTCTTATGTCCATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--GTTTTCTCAGCATCCTACAGAATCTTATACGTACCCACTACAGTATATCATCTTGATATGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATCCAGgatctgccctccaaagttaaagacaaagtgcaaatccttatgattctcaccacttataatgatgcatgaagactgg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552233 396 + 6513552 AACTCTTTTGACTTGCCCTTTACTTATTTAG--AAAAAAAAAATCAGTTTTG-AAATGCAAAAAC-CATATAGGTAAAAC--ATTATTATAATCAACTTGCTTTTTGATAACACTGACATCTTGACT-AA--GAAGATAAAATGTTTCTTATGTCAATTTGGTAGCAATTTTACTCCTGTAGAAAAGAGCTGTGACTCACTGGTCATGCCATTATTGAGTATGCAGGGACTT--GTTTTCTCAGCATCCTACAGAATCTTATACGTACCCACTACAGTGTATCATCTTGATATAGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGAAACCTATtcaggatctgccctccaaaattaaagacaaagtgcaattccttatgattctcaccacttataatgatgcatgaagactgg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333176 383 + 117903854 GACTCTTTTGACTTGCCATATACTTATTT---------AGAAATTAGTTTTGAAAATGCAAAAAC-CATA-AGATAAAAC--ATTATTACAAGCAACCTGCTTGTTGAAAACATTGACATCTTGACT-AA--GAAAATAAAATGTTT-GTATGTCAATTTGGCAGCAATTTTACTCCTATAGAAAATGGCTGTACCTCA-----CATGCCCTTATTGAGTATTCAGTGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATACTGACCCACTACAGTGTATCATCTTGATTTGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATtcaggatctgccatccaaagttaaagacaaggtgcaagtccttat-attcttactacttataatggtgcgtgaagactgg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19510860 391 - 31320352 AACTCTTTTGACTTGCCATATACTTATTTAG----AAAAGAAATCAGTTTTGAAAATGCAAAAAT-AATATAGATAAAAC--ATTATTACAATCAACTTGCTTGTTGAAAACATTGACATCTTGACT-AA--GAAAATAAAATGTTTCTTGTGTCAATTTGGCAGCAATTTTACTCCTGTAGAAAATGGCGGTACTTCA-----CATGCCATTATTGAATATTCAGGGACTT-GATTTTCTCAGCATCCTACAGAATCTTATACTGACCCACTACAGTATATCATCTTGATTTGGAG-------------------------------------------------------------------TGCATGAAACATAAAATTtcaggaacctatccaggatctgccatccaaagttaaagacaaggtgcaagtccttataattcttaccacttataatggtacatgaagactgg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1713160 391 + 2203405 AACTCTTTTGACTTGCCATATACTTATTTAG----AAAAGAAATCAGTTTTGAAAATGCGAAAAC-CATATAGATAAAAC--ATTATTAAAATCAACTTGCTTGTTGAAAGCATTGACATCTTGAAT-AA--GAAAATAAAATGTTTCTCATATCAATTTGGCAGCAATTTTACTCCTGTAGAAAATGGCGATACTTCA-----CATGCCATTATTGAGTATTCAGGGACTT-GGTTTTCTCAGCATCCTACAGAATCTTATACTGACCCACTACAATATATCATCTTGATTTGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATtcaggatctgccatcgaaagttaaagacaaggtgcaagtccttataattcttaccacttataatggtgcatgaagactgg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3660714 391 - 14941987 AACTCTTTTGACTTGCCATATACTTATTTAG----AAAAGAAATCAGTTTTGAAAATGCAAAAAC-CATATAGATAAAAC--ATTATTACAATCAACTTGCTTGTTGAAAACATTGACATCTTGACT-AA--GAAAATAAAATATTTCTTATGTCAATTTGGCAGCAATTTTACTCCTATAGAAAATGGCTATACCTCA-----CATGCCATTATTGAGTATTCGGGGACTT-GGTTTTCTCAGCATCCTACAGAACCTTATACTGACCCACTACAGTATATCATCTTGATTTGGAG-------------------------------------------------------------------TGCATGAAACATGAAATTTCAGGAACCTATtcaggatctgccatccaaagttaaagacaaggtgcaagttcttataattctttccacttacaatggtgcatgaagactgg i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111892700 368 + 195471971 aATTATGTTGAAATATCATACTCTGATTAAA-----AAAAAACTCAATTTTG-AA-----AATAT-AATGTATGGTAAAA--ATGGTCACATTCAATTTACTT-------------ACAAATCTACT-AACTGAAACTGAAATGCTACTTATGCCTGTCTAT-----ATATTGTTTCTAATGAAAATGGTAGTGTCTCTTTGGCTAT-TGATTAGCGAGTCATCTGGGACTT--GTTT--TTATCATCTAGTAGGAGTCTATTCTGATCTACCACAGATACTCATCTTGACCTGCAT-------------------------------------------------------------------TACATAAAATATACTATTTTGGACACTT-TTAATAATTTGTCTTCTAAAGTTAGTGGTCAGATACAAATACTTAAAACATTTACCACTTATCATGAGGTATAAGGATTGG i mm10.chr1 I 8298 C 0 s canFam3.chr1 112363156 401 - 122678785 AACTCTTTTGATCTGCCATATTCATAATGTGGAAAATAAAGAATGTGTTTTGAAAATATGAAAAC-TTAATAGCTAAGATTGATTATTAGTTTCAACATGCTTGTTGATA-CTCTGATGTTATGAGT-AA--GGAAATAACATGTTCCTTATGTCAGTTTGGTAGCAATTTTGTTCCTGTGGAAAATGGATGTGCCTCACTGGCTCTGCCATAATGGAGTCTGCAGGGATTCTGGTGTTCCCAGCACCCTACAGAATCTTATACTGATCCACTATAGTATATCATCTTGACCTGGAG-------------------------------------------------------------------TGCATAAAATCTGAAATTTCAGGAACTTGT-CAGTGTCTAGcctccaaagttaaagactggatgcaaattcttataattcttaccacttataatgatgcatgaagattgg i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 543232 423 - 2150887 AACTATTTTGCCCTGTCATTCTCTTTTCTGG----------------------AAAATATATAAC-AATATAGCTAAAACTAATTATCAGATTTGACATGTTT------------GATGTCTTGAGTGAA--GGAAATAACATGT------AGTTACTTTGGTAGCACAGGTGCCCAGGTGGAAAACTGCGTGGCCTCTTTGGctctgccataat-gagtcctcagggactttggttttctcagtgtctcacagaa-cttaca-----ctactccattatgtcatcatgatgataagatctagtgataaagaagtagcatatgttctaggtatcatgttatgacacatataaaccagagCATATGACACAACACATGCAATTTCAAGAATCTAT-CAGACTACACCCTCTAAAGTTAAAGGCAAAATGTAAATGCTTATAAGCCTTACCACTTACAATGAGGCATGAAAATTGA i dasNov3.JH575754 I 3 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=80440.000000 s hg38.chr18_GL383571v1_alt 190101 7 + 198278 caggtca s panTro5.chr18 65099760 7 + 78221452 caggtca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218733 7 + 77229886 caggtca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5438263 7 + 17472758 caggtca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139479329 7 - 152096393 caggtca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57429071 7 + 70235451 caggtca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63120409 7 - 75711847 caggtca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679810 7 - 18804593 caggtca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13291508 7 + 18905526 caggtca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60120534 7 - 72318688 caggtca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456828 7 - 1517660 caggtca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552629 7 + 6513552 cgggtca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333559 7 + 117903854 tgggtca i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19511251 7 - 31320352 cgggtca i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1713551 7 + 2203405 tgggtca i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3661105 7 - 14941987 ctggtca i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111893068 7 + 195471971 TGGTTCA i mm10.chr1 C 0 I 201 s dasNov3.JH575754 543655 7 - 2150887 TGGGTCA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112363557 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=189770.000000 s hg38.chr18_GL383571v1_alt 190108 20 + 198278 cac--tgtgtttgtccatttga s panTro5.chr18 65099767 20 + 78221452 cac--tgtgtttgtccatttga i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218740 20 + 77229886 cac--tgtgtttgtccatttga i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5438270 20 + 17472758 cac--tgtgtttgtccatttga i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139479336 22 - 152096393 cactgtgtgtttgtccatttga i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57429078 22 + 70235451 cactgtgtgattgtccatttga i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63120416 22 - 75711847 cactgtgtgattgtccatttga i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679817 22 - 18804593 cactgtgtgattgtccatttga i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13291515 22 + 18905526 cactgtgtgattgtccatttga i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60120541 22 - 72318688 cactgtgtgattgtccatttga i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456835 22 - 1517660 cactgtgtgattgtccatttga i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552636 22 + 6513552 cactgtgtgattgtccatttga i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333566 22 + 117903854 cactgtatgttagtccatttga i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19511258 22 - 31320352 cactgtatgttaatccatttga i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1713558 22 + 2203405 cactgtatgttagtccatttga i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3661112 22 - 14941987 cactgtatgttagtccatttga i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 543662 20 - 2150887 CAC--TGAATTTTTCAGTGTGA i dasNov3.JH575754 C 0 I 1646 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111893075 201 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112363557 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=3517435.000000 s hg38.chr18_GL383571v1_alt 190128 381 + 198278 gttactataaaggaacacctgagactgagtaacgtataa-----agaaatatatttggtttacagttctgcaggctgtacatgaaccatactaacagcatctgcttctggtgagggcctcagaaagattgcaatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaagagagggaaacgggggaggtcccatactctttcatcaaccagatcttgaatgaactaacagagtgagaactcactcattaccatggatggggagggcacaaacctattcaggagggatctaccccc-atgacacaaacacctgaccccacctctgaaactggggaatcacatttcaacaagaa-----atttggaggggacaagcatccaaat s panTro5.chr18 65099787 381 + 78221452 gttactataaaggaacacctgagactgagtaacgtataa-----agaaatatatttggtttacagttctgcaggctgtacatgaaccatactgacagcatctgcttctggtgagggcctcagaaagattgcaatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaagagagggaaacgggggaggtcccatactctttcatcaaccagatcttgaatgaactaacagagtgagaactcactcattaccatggatggggagggcacaaagctattcaggagggatctaccccc-atgacacaaacacctgaccccacctctgaaactggggaatcacatttcaacaagaa-----atttggaggggacaaacatccaaat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64218760 381 + 77229886 gttactataaaggaacacctgagactgagtaatgtataa-----agaaatatatttggtttacagttctgcaggctgtacatgaaccatactgacagcatctgcttctggtgagggcctcagaaagattgcaatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaagagagggaaacgggggaggtcccatactctttcatcaaccagatcttgaatgaactaacagagtgagaactcactcattaccatggatggggagggcacaaagctattcaggagggatctaccccc-atgacacaaacacctgaccccacctctgaaactggggaatcacatttcaacaagaa-----atttggaggggacaaacatccaaat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5438290 381 + 17472758 gttactataaaggaacacctgagactgagtaacgtataa-----agaaatacatttggtttacagttctgcaggctgtacatgaaccatactgacagcatctgcttctggtgagggcctcagaaagattgcaatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaagagagggaaacgggggaggtcccatactctttcatcaaccagatcttgcatgaactaacagagtgagaactcactcattaccatggatggggagggcatcaagctattcaggagggatccaccccc-atgacacaaacacctgaccccacctctgaaactggggaatcacttttcaacaagaa-----atttggagggaacaaacatccaaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139479358 377 - 152096393 gttactatataggaacacctgagactgagtaacgtataa-----agaaatatatttggtttacagttttgcaggctgtacatgaagcatactgacagcatctgcttctggtgagggcctcagaaagattgcaatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaagagagggaaacggaggaggtcccatactctttcatcaaccagatcttgcatgaactaacagagtgagaactcacttattacc----atggggagggcaccaagccattcaggagggatccaccccc-gtgacataaacacctgaccccacctctgaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57429100 378 + 70235451 gttactataaaggaacacctgagactgggtaatgtgtaa-----agaaatatatttgatttacagttctgcaggctgtacatgaagcatactgacagcatctgcttctggtgagggcctcagaaggattataatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaaaagagggaaacgggagaggtctcatgctctttcaccagccagatcttgcatgaactagcagagtgagaattcactcattacc----atggggagggcaccaagccattcaggagggatccaccccccatgacccaaatacctggccccacctccaaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaac i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63120438 378 - 75711847 gttactataaaggaacacctgagactgtgtaatgtgtaa-----agaaatatatttgatttacagttctgcaggctgtacatgaagcatactgacagcatctgcttctggtgagggcctcagaaggattataatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaaaagagggaaacgggagaggtctcatgctctttcaccagccagatcttgcatgaactagcagagtgagaattcactcattacc----atggggagggcaccaagccattcaggagggatccaccccccatgacccaaatacctggccccacctccaaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaac i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13679839 383 - 18804593 gttactataaaggaacacctgagactgggtaatgtgtaa-----agaaatatatttgatttacagttctgcaggctgtacatgaagcatactgacagcatctgcttctggtgagggcctcagaaggattataatcatggcagaagcccaa-ggggaaccagcata-------tgagag-----agggagaaaaagagggaaacgggagaggtctcatgctctttcaccagccagatcttgcatgaactagcagagtgagaattcactcattacc----atggggagggcaccaagccattcaggagggatccaccccctatgacccaaatacctggccccacctccaaaactggggaatcacatttcaacaagaaatgtgatttggagggaacaaacatccaaac i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13291537 379 + 18905526 gttactataaagcaacacctgagactgggtaatgtgtaa-----agaaatatatttgatttacagttctgcaggctgtacatgaagcatactgacagcatctgcttctggtgaaggcctcagaaagattataatcatggcagaagcccaagggggaaccagcata-------tgagag-----agggagaaaaagagggaaacgggggatgtcccatactctttcaccaggcagatcttgcatgaactagcagagtgagaattcactcattacc----atggggagggcaccaagccattcaggaaggatctaccccctatgacccaaatacctgaccccacctccaaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaac i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60120563 379 - 72318688 gttactataaaggaacacctgagactgggtaatgtgtaa-----agaaatatttttgatttacagttctgcaggctgtacatgaaacatactgacagcatctgcttctggtgagggtctcagaaagattataatcatggcagaagcccaagggggagcgagcata-------tgagag-----agggagaaaaagggggaaacggggaatgtcccatactctttcaccagccagatcttgcatgaactagcagagtgagaattcactcattacc----atggggagggcaccaagccattcaggagggatccaccccccatgacccaaatacctgaccccacctccaaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaac i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 456857 379 - 1517660 gttactataaagcaacacctgagactgggtaatgtgtaa-----agaaatatatttgatttacagttctgcaggctgtacatgaagcatactgacagcatctgcttctggtgaaggcctcagaaagattataatcatggcagaagcccaagggggaaccagcata-------tgagag-----agggagaaaaagagggaaacgggggatgtcccatactctttcaccaggcagatcttgcatgaactagcagagtgagaattcactcattacc----atggggagggcaccaagccattcaggaaggatctaccccctatgacccaaatacctgaccccacctccaaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaac i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3552658 378 + 6513552 gttactataaaggaacacctgagactgggtaatgtgtaa-----agaaatatatttgatttacagttctgcaggctgtacatgaagcatactgacagcatctgcttctggtgagggcctcagaaagattataatcatggcagaagccaaa-ggggaaccagcata-------tgagag-----agggagaaaaagagggaaatgggggatgtcccatactctttcgttagccagatcttgcatgaactagcagagtgagaattcactcgttacc----atggggaaggcaccaagccattcaggagggacccgccccccatgacccaaatacctgaccccacctccaaaactggggaatcacatttcaacaagaa-----atttggagggaaaaaacatccaaac i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333588 387 + 117903854 gttactataaaggaacacctgagactggacaatgtataaagaagagaaaactatttggcttacagttctgcaggctgtacataaagcatactgacaccttctgcttctagtgagggcctcagaaaaattacaatcatggcagaagcccaa-ggggaccaagcatttaattcctgataatttcccaggagaaagagagagaaagtggggaggtcccatattatttaatcagccagatcttgcatgaactaaca----gagaactcactcattacc----atggggagggcaccaatctattcatgagggatccacctcc-atgactcaaacacct---cccacctctaaaactggggaatcacatttcaacaagaa-----attttgagggaacaaacagccaaac i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19511280 384 - 31320352 gttactgtaaagaaacacctgacactgggtaatgtataaagaaaagaaatctatttggcttacagttctgcattctgtacatgaagcatactgacagcttctgcttctagtgagggcctcagaaaaattacaatcatggcggaagcccaa-ggggaccaagcatt---tccctgataattttccaggagaaggagagtgaaagtggggaggtcccatactatttcatcagccacatcttgcatgaactaaca----gagaactcactcattacc----atggggagggcaccaagctattcatgaaggatccaccccc-atgactcaaacacct---cccacctctaaaactggggaatcacatttcaacaagaa-----atttggagggaacaaacatccaaac i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1713580 383 + 2203405 gttactgtaaaggaacacctgagactgggtaatgtataaagaaaagaaatctatttggattacagttctgcaggctgtacatgaagcatactgacagcttctgcttctagtgagggcctcagaaaaattacaatcatggcagaagcccaa-ggggaccaagcatt---tccctgaaaatttccca-gagaaagagagagaaagtggggaggtctcatactatttcatcagccagatcttgcatgaactaaca----gagaactcactcattacc----atagggagggcaccaagcaattgatgaggaaaccaccccc-atgactcaaacacct---cccacctctaaaactggggaatcacatttcaacaaaaa-----atttggagggaacaaacatccaaac i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3661134 381 - 14941987 gttactataaaggaacacctgagactgggtaatgtataaagaaaagaaatctatttggcttgcagttctgcaggctgtatatgaagcatactgacagcttctgcttctagtgagggcctcagaaaaattacaatcatggcagaagcccaa-ggggaccaagcatt---tccctgataatttcccaggagaaagagagagaaagtggggaggtcccatactatttcatcagccagatcttgcatgaacta--a----gagaactcactcattacc----at-gggagggcaccaagctattcaagagggatccaccccc-atgtctcaaatacct---cccacctctaaaactggggaatgccatttcaacaagat-----atttggagggaacaaacatccaaag i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111893075 201 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112363557 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=3096036.000000 s hg38.chr18_GL383571v1_alt 190509 288 + 198278 tatatcacactaaatcttggagaaacattgtatcagcatttgattgtactactccaacccatttgttgccaaattagtaa--gcctatctatcagaaaggctgagagaaagagaaggctcctcagctggtccaagctgcaatgtaagtagcatagacacttgggccacttacactggtggccccagtgttgcttggtgtatctgtagttgctcagaaatgctgtatggaaccTGAAGCAAAGCAATAGGGTCGCTGCT--ATGCAGTTgggataggaaagagtatgccatca s panTro5.chr18 65100168 288 + 78221452 tatatcacactaaatcttggagaaacattgtatcagcatttgattgtactactccaacccatttgttgccaaatttgtaa--gcctatctatcagaaaggctgagagaaagagaaggctcttcagctggtccaagctgcaatgtaagtagcatagacacttgggccacttacactggtggccccagtgttgcttggtgtatctgtagttgctcagaaatgctgtatggaaccTGAAGCAAAGCaatagggtcgctgct--atgcagttgggataggaaagagtatgccatca i panTro5.chr18 C 0 C 0 s panPan2.chr18 64219141 288 + 77229886 tatatcacactaaatcttggagaaacattgtatcagcatttgattgtactactccaacccatttgttgccaaatttgtaa--gcctatctatcagaaaggctgagagaaagagaaggctcttcagctggtccaagctgcaatgtaagtagcatagacacttgggccacttacactggtggccccagtgttgcttggtgtatctgtagttgctcagaaatgctgtatggaaccTGAAGCAAAGCaatagggtcgctgct--atgcagttgggataggaaagagtatgccatca i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5438671 288 + 17472758 tatatcacactaaatcttggagaaacattgtatcagcatttgattgtactactccaacccatttgttgccaaattagtaa--gcctatctatcagaaaggctgagagaaagagaaggctcttaagctggtccaagctgcaatgtaaatagcatagacacttgggccacttacactggtggccccagtgttgcttggtgtatctgtagttgctcagaaatgctgtatggaaccTGAAGCAAAGTAGTAGGGTCGCTGCT--ATGCAGTTgggataggaaagagtatgccatca i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139479735 288 - 152096393 tatatcacactaaatcttggagaaacattgtatcagcatgtgattgtactactccaacccatttgttgccaaattagtaa--gcctatctatcagaaaggctaagagaaagagaaggctcttaagctggtccaagctgcaatgtaaatagcatagacacttgggccactcacactggtggccccagtgttgcttggtgtatctgtagttgctcagaaatgctgtatggaaccTGAAGCAAAGTAATAGGGTTGCTGCT--ATGCAGTTgggataggaaagagtatgccatca i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57429478 288 + 70235451 tatatcacactaaatcttggagaaacattatatcagcatttgattgtactactgcaacccatttattgccaaattactaa--gcctatctatcaataaggctaagagaaagagacggctcttaagctggtccaagctgcaatgtaagcagcacagacacttgggccacttacactggcggccccagtgttgcctggggtatctgtagttgctcagaaatgctgcatggaaccTGAAGCAAAGTAATAGGGTTGctgct--atgcaattgggataggaaagagtatgccatca i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63120816 288 - 75711847 tatatcacactaaatcttggagaaacattatatcagcatttgattgtactactacaacccatttattgccaaattactaa--gcctatctatcaataaggctaagagaaagagacggctcttaagctggtccaagctgcaatgtaagcagcatagacacttgggccacttacactggcggccccagtgttgcctggggtatctgtagttgctcagaaatgctgcatggaaccTGAAGCAAAGTAATAGGGTtgctgct--atgcaattgggataggaaagagtatgccatca i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13680222 288 - 18804593 tatatcacactaaatcttggagaaacattatatcagcatttgattgtactactacaacccatttattgccaaattactaa--gcctatctatcaataaggctaagagaaagagacggctcttaagctggtccaagctgcaatgtaagcagcatagacacttgggccacttacactggcggccccagtgttgcctggggtatctgtagttgctcagaaatgctgcatggaaccTGAAGCAAAGTaatagggttgctgct--atgcaattgggataggaaagagtatgccatca i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13291916 285 + 18905526 tatatcacactaaatcttagagaaac---atatcagcatttgattgtactactccaacccatttattgccaaattactaa--gcctatctatcagtaaagctaagagaaagagacagctcttaagctggtccaagctgcaatgtaagcagcatagacacttgggccacttacactggcagccccagtgttgcctggggtatctgtagttgctcagaaatgctgcatggaaccTGAAGCAAAGTAATAGGGTtgctgct--atgcaattgggataggaaagagtatgccatca i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60120942 288 - 72318688 tatatcacactaaatcttggagaaacattatatcagcatttgattgtactactccaacccatttattgccaaattactaa--gcctatctatcagtaaggctaagagaaagagacggctcttaagctggtccaagctgcaatgtaagcagcatagacacttgggccacttacactggcggccccagtgttgcctggggtatctgtggttgctcagaaatgctgcatggaaccTGAAGCAAAGTAACAGGGTTGctgct--atgcaattgggataggaaagagtatgccatca i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 457236 285 - 1517660 tatatcacactaaatcttagagaaac---atatcagcatttgattgtactactccaacccatttattgccaaattactaa--gcctatctatcagtaaagctaagagaaagagacaactcttaagctggtccaagctgcaatgtaagcagcatagacacttgggccacttacactggcagccccagtgttgcctggggtatctgtagttgctcagaaatgctgcatggaaccTGAAGCAAAGTAATAGGGTTGctgct--atgcaattgggataggaaagagtatgccatca i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3553036 287 + 6513552 tatatcacactaaatcttggagaaacattatatcagcatttgattgtactactccaacccatttattgccaaattactaa--gcctatctatcggtaaggctaagagaaaaagacggctcttaagctggtccaagctgcaaagtaagcagcatagacacttgggccacttacactggcagccccagtgttgcttggggtatctgtaattgctcagaaatgctgcatggaaccTGAAACAAAGTaatagggttgctgct--atgcaattgggatagg-aagagtatgccatca i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105333975 288 + 117903854 tatatcacactgaatcttggagaaacattgtatcagcatttgattgtactactcaaaccgatttatcatcaaattagtag--gcctatctaccagtaaggctaaaagaaagagacggttcttaagctagtccaagctgtaatgtatgcatcatagacacttgggccacttacactggtggccccagtgttacttggggtatctgtagttgctcagaaacgctatgtggaaccTGAAGCAAAGTAATAGGGTTGCTGCT--ATGCTGTTGGGATAGGAACAAGAATGCCATCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19511664 288 - 31320352 tatatcacactgaatcttgaagaaacattatatcagcatttgattgtactactcaaacccatttatcatcaaattagtag--gcctatctaccagtaaggctaaaagaaagagacagttcttaagctagtccaagctataatgtatgcatcatagacacttgggccacttacactggtggccccactgttgcttggggtatctgtagttgctcagaaatgctatatggaaccTGAAGCAAAGTAGTAGGGTTGCTGCT--GTGCTGTTGGGAAAGGAACAAGTATGCCATCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1713963 288 + 2203405 tatatcacactgaatcttgaagaaacattatatcagcatttgattgtactactcaaacccatttatcatcaaattagtag--gcctatctaccagtaaggctaaaagaaagagacagttcttaagctagtccaagctgtaatgtatgcatcatagacacttgggccacttacactggtggccccagtgttgcttggggtatctgtagttgctcggaaatgctatatggaaccTGAAGCAAAGTAGTAAGGTTGCTGCT--ATGCTGTTGGGATAGGAACGGGTATGCCATCA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3661515 287 - 14941987 tatatcacactgaatcttggagaaacattatatcagcatttgattgtactattcaaacccatttatcatcaaattagtag--gcctatctaccagtaaggctaaaagaaagagagggttcttaagcta-tccaagctgtaatgtatacatcatagacacttgggccacttacactggtggccccagtgttgcttggggtatctgtagttgctcagaaatgctatatggaaccTGAAGCAAAGTAATAGGGTTGTTGCT--ATGCTGTTGGGATAGGAACAAGTATGCCATCA i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112363557 291 - 122678785 tacatcacactaaatcttagagaaacattatatcaccatttggatgtactacttcaagccatttatcaaggcatttagaaaggctcatctatgaatgaaagtaagagaaatagaaggctctttagccagtgcaggctgcaatgcaagcagtttggatactgggtccctttacaccagcagacccaatgtttctcgaggtatctgcagctgctcag-catgctatgtggaacctgtgATAAAGTaataggtttgctgctacacacactagggctagaaaagattatgtcttaa i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111893075 201 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=5209176.000000 s hg38.chr18_GL383571v1_alt 190797 507 + 198278 aatcagggaattttaagggtgcttctcagttttgc--catgttcaatgctaacagttaatgtaaaactacaataaccttataaaggctggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGAAAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaagtgtg-----------atttcctg----agccattggagaaatcagaat--ggtggttactattta-tatcttctaattgctttgccatatcatgtatctacctatgtacattaataaacatcCACCTCACTTTCTTACCCGAATTATTTTATATATGGTATTTGTGAAGTTTATTTTGCC--TGAGACTG-GAATATTTTGTACTTTCAAATAATATCAACCATGCCATTATTATTTAAAAGTATAAAATATGGGGACTCTGGCAGGTAAAATAAAATTTCAAATTACATTCATGTTACAGAATATCAAAATGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT s panTro5.chr18 65100456 507 + 78221452 aatcagggaattttaagggtgcttctcagttttgc--catgttcaatgctaacagttaatgtaaaactacaataaccttataaaggctggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGAAAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaagcgtg-----------atttcctg----agccattggagaaatcagaat--ggtggttactattta-tatcttctaattgctttgccatatcatgtatctacctatgtacattaataaacatcCACCTCACTTTCTTACCCGAATTATTTTATATATGGTATTTGTGAAGTTTATTTTGCC--TGAGACTG-GAATATTTTGTACTTTCAAATAATATCAACCATGCCATTATTATTTAAAAGTATAAAATATGGGGACTCTGGCAGGTAAAATAAAATTTCAAATTACATTCATGTTACAGAATATCAAAATGTTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64219429 507 + 77229886 aatcagggaattttaagggtgcttctcagttttgc--catgttcaatgctaccagttaatgtaaaactacaataaccttataaaggctggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGAAAGTGGAAATATGGAATGATTGGTGGAAGAGTTAAATTACAAATCACAAGCGTG-----------ATTTCCTG----AGCCATTGGAGAAATCAGAAT--GGTGGTTACTATTTA-TATCTTCTAATTGCTTTGCCATATCATGTATCTACCTATGTACATTAATAAACATCCACCTCACTTTCTTACCCGAATTATTTTATATATGGTATTTGTGAAGTTTATTTTGCC--TGAGACTG-GAATATTTTGTACTTTCAAATAATATCAATCATGCCATTATTATTTAAAAGTATAAAGTATGGGGACTCTGGCAGGTAAAATAAAATTTCAAATTACATTCATGTTACAGAATATCAAAATGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5438959 502 + 17472758 aatcagggaattttaagggtgcttctcagtttttc--catgttcaatgctaacagttaatgtaaaactacaataaccttataaaggctggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGAAAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaagcgtg-----------atttcctg----agccattggagaaatcagaat--ggtggttactattta-tatcttctaattgctttgccatatcatgtatctacctatgtacattaataaacatcCACCTCACTTTCTTACCCGAATTATTTTATATATGGTATTTGTGAAGTTTATCTTGCC--TGAGACTG-GAATATTTTGTACTTTCAAATAATATCAACCATGCCATTATTATTTAAAAGTATAAAATATGGGGACTCTGGCAGG-----TAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139480023 507 - 152096393 aatcagggaattttaagggtacttctcagttttgc--catgttcgatgttaacagttaatgtaaaactacaataaccttataaaggctggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGGAAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaaccttg-----------atttccta----agccactggagaaatcagaat--ggtggttactattta-tattttctaattgctttgccatatcaggtatctacctatgtacattaataaacatcCACCTCACTTTCTTACCCAAATTATTTTATATATGGTATTTGTGAAGTTTATTTTGCC--TGAGACTG-GAATATTTTGTACTTTCAAATAATATCAACCATGCCATTATTATTTAAAAGTATAAAATATGGGGAGTCTGGCAGGCAAAATAAAATTTCAAAGTACTTTCATGTTACAGAATATCAAAGTGCTTATATAACTGAAGTAGATGAGGAGGAAAT-ATCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57429766 507 + 70235451 aatcagggaattttaagggtgcttctcagttttgc--tatgttcaatgctaacagttaatgtaagactacaataaccttataaagaccggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGGGAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaaccgtg-----------atttccta----acccattggagaaatcagaat--ggtggttactattta-tattttctaattgctttgctgtatcatgtgtctacctatgtacattaattaacatccacctcactttctcaccctaattattttacataTGGTATTTGTGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATAATATCAACCATGCTGTTATTATTTAAAAGTATACAATATGGGAA-TTTCGCGGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63121104 507 - 75711847 aatcagggaattttaagggtgcttctcagttttgc--tatgttcaatgctaacagttaatgtaagactacaataaccttataaagaccggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGGGAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaaccgtg-----------atttccta----acccattggagaaatcagaat--ggtggttactattta-tattttctaattgctttgctgtatcatgtgtctacctatgtacattaattaacatccacctcactttctcaccctaattattttacataTGGTATTTGTGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATAATATCAACCATGCTGTTATTATTTAAAAGTATACAATATGGGAA-TTTCGCGGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13680510 507 - 18804593 aatcagggaattttaagggtgcttctcagttttgc--tatgttcaatgctaacagttaatgtaagactacaataaccttataaagactggacAATCATGCAC--TAAAATATATTAGGGGTAATGAATCCAGGGAGTGGAAATATGGAATGATTGGTGGAAGAGTTAAATTACAAATCACAACCGTG-----------ATTTCCTA----ACCCATTGGAGAAATAAGAAT--GGTGGTTACTATTTA-TATTTTCTAATTGCTTTGCTGTATCATGTGTCTACCTATGTACATTAATTAACATCCACCTCACTTTCTCACCCTAATTATTTTACATATGGTATTTGTGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATAATATCAACCATGCTGTTATTATTTAAAAGTATACAATATGGGAA-TTTCGCGGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13292201 506 + 18905526 aatcagggaattttaagggtgcttctcagttttgc--tatgttcaatgctaacagttaatgtaaggctacaataaccttataaagactggacAATCATGCAC--TAAAATATATTAGGAGTAATGAATCCAGGGAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaagcgtg-----------atttccta----acccattggagaaatcagaat--ggtggttactattta-tattttctaattgctttgctgtatcatgtgtctacctatgtacattaattaacatccacctcactttctcaccctaattattttacataTGGTATTTGTGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATAATATCAACCATGCCGTTATTATTTAAAAGTATACAATATGGGAAGTCTCGCAGGCAAAATAAAATTTCAAATTACTTTTATGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATC-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60121230 507 - 72318688 aatcagggaattttaagggtgcttctcagttttgc--catgttcaatgctaacagttaatgtaagactacaataaccttataaagactggacAATCATGCAC--TAAAATATATTAGGGGTAAT-AATCCAGGGAGTggaaatatggaatgattggtggaagagttaaattacaaatcacagctgtg-----------atttccta----acccattggagaaatcagaat--ggtggttactatttt-tattttctaattgctttgCCGTATCATGTGTCTACCTATGTACATTAATTAACATCCACCTCACTTTCTCACCCTAATTATTTTACATATGGTATTTGTGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATATTATCAACCATGCTGTTATTATTTAAAAGTATACAATATGAGAAGTCTCACGGGCAAAATAAAATTTCAAATTACTTTCTTGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATCAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 457521 506 - 1517660 aatcagggaattttaagggtgcttctcagttttgc--tatgttcaatgctaacagttaatgtaaggctacaataaccttataaagactggacAATCATGCAC--TAAAATATATTAGGAGTAATGAATCCAGGGAGTggaaatatggaatgattggtggaagagttaaattacaaatcacaagcgtg-----------atttccta----acccattggagaaatcagaat--ggtggttactattta-tattttctaattgctttgctgtatcatgtgtctacctatgtacattaattaacatccacctcactttctcaccctaattattttacataTGGTATTTGTGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATAATATCAACCATGCCATTATTATTTAAAAGTATACAATATGGGAAGTCTCGCAGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAGGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-ATC-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3553323 508 + 6513552 aatcagggaattttaagagtgcttctcagttttgc--catgttcaatgctaacagttaatgcaagactacaataaccttataaagactggacAATCATGCAC--TAAAATATATTAGAGGTAATGAATCCAGGGAGTGGAAATATGGAATGATTGGTGGAAGAGTTAAATTACAAATCACAACCGTG-----------ATTTCCTA----ACCCATTGGAGAAATCAGAAT--GGTGGTTACTATTTG-TGTTTTCTAATTGCTTTGCCGTATCATGTGTCTACCTATGTACATTAATTAACATCCACCTCACTTTCTCACCCTAATTATTTTACATATGGTATTTGCGAAGTTTATTTTGCC--TGAGACTTCCCATATTTTGTACTTTCAAATAATATCAACCATACCGTTATTATTTAAACGTATACAATATGAGAAGTCTTGAGGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATAACTGAACTAGATGAGGAAGAAAT-AGCAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105334263 509 + 117903854 AATCAGGGAATTTTAAGGATGCTTCTCAA-TTTGC--CATGTTTGGTGCTAACAGGTGATGTAAGACTACAACAACCTTATAAAGGCTGGATAATCATGCAC--TAAAATATATTAGGGGTAATGAATCTAGGAGGTAGAAATATGAAATGATGGGTGGAAAAGTTATATTGCAAATCACAATCGTG-----------ATTTCCTG----ATTCATTGGAGAAATCAGAAT--GGTAGTTACTATTTA-TATTTTCTAATTGCTTTGTAGCATCATGTATCTACCCATGTACATTAATTAACATCCACCCAATTTTCTTACTCTAATTATTTTATATATGGTATTTGTGAAGTTTATTTTCCCTGTGAGATCTCCCATATTTTGTATTTTCAAGTAATATCAACCATGCTGATATTATTTAAAAGTATAAAATATGGGAAGTCTCGCAGGCAAAATAAAATTTCAAATTAGTTTCATGTTACAGAATATCAAAGTGCTTATATGACTGAACTAGATGAGGAAGAAAT-CTCAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19511952 509 - 31320352 AATCAGGGAATTTTAAGAATGCCTCTCAA-TTTGC--CATGTTCAGTGCTAACAGGCAATGTAAGACTACAACAACCTTAGAAAGGCTGGATAATCATGCAC--TAAAATATATTAGGGGTAATAAATTTAGGAAGTAGCAATATGAAATGATGGGTGGAAAAGTTATATTGCAAATCACAATCGTG-----------ATTTCCTG----ATTCATTGGAGAAATCAGAAT--GGTAGTAACTATTTA-GATTTTCTAATTGTTTTGTAGTGTCATGTATCTACTCATGTACATTAATTAACATCCACCCGATATTCTTACCCTAATTATTTTATATATGGTATTTGTGAAGTTTATTTTCCCTGTGAGATTTCCCATATTTTGTATTTTCAAGTAATATCAACCATGCTGATATTATTTAAAAGTATAAAGTATGGGAAGTCTCACAGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAATGCTTATATGACTGAGCTAGATGAGGAAGAGAT-ATCTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1714251 504 + 2203405 AATCAGGGAATTTTAAGGATGCTTCTCAA-TTTGC--CATGTTTGGTGCTAACAGGTAATATAAGACTACAACAACTTTATAAAGGCTGGATAATCATGTAC--TAAAATATATT-GGGGTAATGAATCTAGGAAGTAGAAATATGAAATGATGGGTGGAAAAGTTATATTGCAAATCACAATCATG-----------ATTTCCTG----ATTCTTTGGAGAAATCAGAAT--GGTAGTAACTAT-----ATTTTCTAATTGCTTTGTAGCATCATGTATCTACCCATGTACATGAATTAACATCCACCCGATTTTCTTACCCTAATTATTTTATATATGGTATTTGTGAAGTTTATTTTCCCTGTGAGATTTCCCATATTTTGTATTTTCAAGTAATATCAATCATGCTGATATTATTTAAAAGTATAAAATATGGGAAGTCTCACAGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATGACTGAACTAGATGAGGAAGAGAT-ATCAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3661802 505 - 14941987 AATCAGGGAATTTTAAGGGTGCTTCTCAA-TTTGC--CATGTTCGGTGTTAACAGGTAATGTAAGACTACAACAACCTTATAAAGGCTGGATAATCATACAC--TAAAATATATTAGGGGTAATGAATCTAGGAAGTAGAAATATGAAATGATGGGTGTAAAAGTTATATTACAAATCACAGTCATG-----------ATTTCCTG----ATTCATTGGAGAAATCAGAAT--GATAGTTACTAATTA-TATTTTCTAATTGCTTTGTAGCATCATGTATCTACCCATGTACATTAATTAGCATCCACCCGATTTTCTTACCC----TATTTTATATATGATATTTGTGAAGTTTATTTTCCCTGTGAGATTTCCCATATTTTGTATTTTCAAGTAATATCAACCATGCTGATATTATTTAAAAGTATAAAATATGGGAAGTCTCACAGGCAAAATAAAATTTCAAATTACTTTCATGTTACAGAATATCAAAGTGCTTATATGACTGAACTAGATGAGGAAGAAAT-ATCAT i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111893276 394 + 195471971 AATTTGGGAAAAGAAAGAATGCTTCTCAG--TAAC--C--------TGCTAACAGTTAATATAAAACTGTAGCAACCATGTATAAG--AGGAAAGCATGTAC--TATAA-ATTTTA---------AACATAAGAAGCAAGAACAAGGAAT-ACTTCTGAAAGAATTAAATTGTAAATAACATTCATGACATGTATTCAATATTCTG----ACTTATTGAAGGAAAAAGAACCATGTGTTGTCTATTCA-AATCTTCTAAATATTTTGCTGTATGATATA-----CTATGTATGCTATCTAGAACCCCCT---CTTTATTTCCCTAAAGTTTTCACAGA--------GAAAAGTCTATGT------AGAAACAT------------------------------------------------------------------------------------AAACTACCATTTATTTTCCTGTTACAAAATATAGAATTGCTAATATGTCTGAACTAGACAAGTAAAGAAT-ATCAT i mm10.chr1 I 201 I 449 s canFam3.chr1 112363848 420 - 122678785 aagcagagaatcatgggaatgcctcttttttttgcaacatattgaatggtaataggtaatgcaagagttcaacaaccat-tgcaggcaggacaactaTGTACTTTCAGATATGCTAGGGATAAAGAATCCAGGAAGCGGAAACATGGAATGGCCGTTGGAAGAATTAAATCACCAATAACAACTCTG-----------ATTTTCTGATAAACCCATTAAAGAAATAACAAT--GACAATTCCTGCCCATTTTTTTCTCTTTTCTTTGTTATGTGTTATCTGTACATATGCACATTGACTAATATCCTACCCACTCTCTTCCCCTAATTATTATATGTAGGACATTTGTGGAG-------------TGGT--------------------------------------------------------------------------------------TGAATTTTCAAATTTCCTTCATGTTACAGAATATCAAAATGCTAATATGACTGAACTAGACGAGGAAGAAATAATCAT i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=533357.000000 s hg38.chr18_GL383571v1_alt 191304 54 + 198278 -------------TAGAGATAGA-----AGCTGATGATTTTGAGGACATTTTGTTTTGGCAAGAATGTGAAC s panTro5.chr18 65100963 54 + 78221452 -------------TAGAGATAGA-----AGCTGATGATTTTGAGGACATTTTGTTTTGGCAAGAATGTGAAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64219936 54 + 77229886 -------------TAGAGATAGA-----AGCTGATGATTTTGAGGACATTTTGTTTTGGCAAGAATGTGAAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439461 54 + 17472758 -------------TAGAAATAGA-----AGCTGATGATTTTGAGGACATTTTGTTTTGGCAAGAATGTGAAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139480530 54 - 152096393 -------------TAGAGATAGA-----AACTGATGATTTTAAGGACATTTTGTTTTGGCAAGAATGTAAAC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430273 54 + 70235451 -------------TAGAGATAGA-----ATCTGATGATTTTGAGGACGTTTTGATTTGGCAAGAATGTGAAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63121611 54 - 75711847 -------------TAGAGATAGA-----ATCTGATGATTTTGAGGACGTTTTGATTTGGCAAGAATGTGAAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681017 54 - 18804593 -------------TAGAGATCGA-----ATCTGATGATTTTGAGGACGTTTTGATTTGGCAAGAATGTGAAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13292707 53 + 18905526 --------------AGAGATAGA-----AGCTGATGATTTTGAGGATGTTTTGATTTGTCAAGAATGTGAAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60121737 54 - 72318688 -------------TAGAGATAGA-----AGCTGATGATTTTGAGGATGTTTTGATTTGTCAAGAATGTGAAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458027 53 - 1517660 --------------AGAGATAGA-----AGCTGATGATTTTGAGGATGTTTTGATTTGTCAAGAATGTGAAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3553831 54 + 6513552 -------------TAGAGATAGA-----AGCTGATGATTTTGAGGGCGTTTTGATTTGGCAAGAATGTGAAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105334772 54 + 117903854 -------------TAGAGATAGA-----AGCTGATGGTTTTGAGAACATTTTGTTTTGGCAAGAATGTGAAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512461 54 - 31320352 -------------TAGAGATAGA-----AGCTGATGGTTTTGAGAACATTTTGTTTTGGCAAGAATGTGAAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1714755 54 + 2203405 -------------TAGAGATAGA-----AGCTGATGGTTTTGAGAACATTTTGTTTTGGCAAGAATGTGAAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662307 54 - 14941987 -------------TAGAGATAGA-----AGCTGATGGTTTTGAGAACATTTTGTTTTGGCAAGAATGTGAAC i aotNan1.NW_018502140v1 C 0 C 0 s canFam3.chr1 112364268 72 - 122678785 CAGAAATCTGAACTGGATGCAGATCCATGGCTGATGCGATGTGAGACTCTTCATTTTGTTAAGAAAATGCAC i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111893670 449 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=880573.000000 s hg38.chr18_GL383571v1_alt 191358 88 + 198278 TTGTTTTCACATTTATAGGTAAAATTGTATTTTCCTGAGATGGGAGGGTGGAGCCTATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG s panTro5.chr18 65101017 88 + 78221452 TTGTTTTCACATTTATAGGTAAAATTGTATTTTCCTGAGATGGGAGGGTGGAGCCTGTTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64219990 88 + 77229886 TTGTTTTCACATTTATAGGTAAAATTGTATTTTCCTGAGATGGGAGGGTGGAGCCTATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439515 88 + 17472758 TTGTTTTCACATTTATAGGTAAAATTGTATTTTCCTGAGATGGGAGGGTGGAGCCTATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139480584 88 - 152096393 TTGTTTTCACATTTATAGGTAAAATTGTATTTTCCTGAGATGGGAGGGTGGAGCCCATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430327 87 + 70235451 TTGTTTTCACATTTATAAGTAAAATCGTATTTTCCTGAGATGGGAAGGTGGACCCTATT-TTTTCATTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63121665 87 - 75711847 TTGTTTTCACATTTATAAGTAAAATCGTATTTTCCTGAGATGGGAAGGTGGACCCTATT-TTTTCATTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681071 87 - 18804593 TTGTTTTCACATTTATAAGTAAAATCGTATTTTCCTGAGATGGGAAGGTGGACCCTATT-TTTTCATTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13292760 88 + 18905526 TTGTTTTCACATTTGTAAGTAAAATCGTATTTTCCTGAGATGGGAAGGTGGAGCCTATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60121791 88 - 72318688 TTGTTTTCACATTTATAAGTAAAATCGTATTTTCCTGAGATGGGAAGGTGGAGCCTATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458080 88 - 1517660 TTGTTTTCACATTTGTAAGTAAAATCGTATTTTCCTGAGATGGGAAGGTGGAGCCTATTATTTTCATTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3553885 88 + 6513552 TTGTTTTCACATTGATAAGTAAAATCACATTTTCCTGAGATGGGAAGGTGGAGCCTATTATTTTCACTGTT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105334826 88 + 117903854 GTGTTTTCATTTTTATAGGTGAAATTGTGTTTTCCTAAGATGGGATGGTGGAGCCTATTATTTTTGTTGCT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512515 88 - 31320352 GTGTTTTCATTTTTATAGGTGAAATTGTGTTTTCCTGAGATGAGATGGTGGAGCCTATTATTTTTGTTGCT-----------------------------------------------------------------------------AGAAAA----------------TTCA---AGTATGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1714809 88 + 2203405 ATGTTTTCATTTTTGTAGGTGAAATTGTGTTTTCCTGAGATGGGATGGTAGAGCCTATTATTTTTGTTGCT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662361 88 - 14941987 GTGTTTTCATTTTTATAGGTGAAATTGTGTTTTCCTGAGATGGGGTGGTGGGGCCTATTATTTTTGTTGTT-----------------------------------------------------------------------------AGAAAG----------------TTCA---AGTATGG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111894119 85 + 195471971 TTGTTTCCATATTTAGAACTGAAATTATATTTT--TGTAATGGAAAACTAGAGATGA-CAGTTTCATATCT-----------------------------------------------------------------------------TGAAAG----------------TTTA---CAGATAA i mm10.chr1 I 449 C 0 s canFam3.chr1 112364340 183 - 122678785 TTGTTTTCATTCTTGAAAGTGAAATTATATTTTCCTAGGATGGGGGACTAGA-CCTCTTATTTCTATTGTTTAAGTATAATTATTAttatttattattttgagatagtgtgtgcacacgcttgagtgggggagggcagggggagagcaagaaagaatcttaagcaggctcctcacccagtgtgg i canFam3.chr1 C 0 I 112 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=3155298.000000 s hg38.chr18_GL383571v1_alt 191446 296 + 198278 AAAAAGGCTGCTTGTTCATATTGAGAAATTTATGACTGGATTATA-----------------------AAGGCTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------AATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACTAGA-ATTTACACATGTGACTTTGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGACATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG s panTro5.chr18 65101105 296 + 78221452 AAAAGGGCTGCTTGTTCATATTGAGAAATTTATGACTGGATTATA-----------------------AAGGCTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------AATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTTGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGACATGAGGCATCCTTCTTCTCGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220078 296 + 77229886 AAAAGGGCTGCTTGTTCATATTGAGAAATTTATGACTGGATTATA-----------------------AAGGCTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------AATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTTGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGACATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439603 296 + 17472758 AAAAGGGCTGCTTGTTCATATTGAGAAATTTATGACTGGATTATA-----------------------AAGGCTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------AATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTTGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGACATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139480672 296 - 152096393 AAAAGGGCTGCTTGTTCATATTGAGAAATTTATGACTGGATTATA-----------------------AAGGCTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------AATTTCCGTACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCGGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTCGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGACATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430414 296 + 70235451 AAAAGGGCTGCTTGTTCATATTGAGAAATTTGTGACGGGATTATA-----------------------AAGGCTGCAATGTTTAAAATATGCTCCAATCCTTTTTTCTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-AATTACACATGTGACTTCGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63121752 296 - 75711847 AAAAGGGCTGCTTGTTCATATTGAGAAATTTGTGACGGGATTATA-----------------------AAGGCTGCAATGTTTAAAATATGCTCCAATCCTTTTTTCTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-AATTACACATGTGACTTCGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681158 296 - 18804593 AAAAGGGCTGCTTGTTCATATTGAGAAATTTGTGACGGGATTATA-----------------------AAGGCTGCAATGTTTAAAATATGCTCCAATCCTTTTTTCTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-AATTACACATGTGACTTTGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13292848 295 + 18905526 AAAAGGGCTGCTTGTTCATATTGAGAAATTTGTGACGGGATTATA-----------------------AAGGCTGGAATGTTTAAAATATGTTCCAATCCTTTTTTCTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTCGATTAA-GCTAAACCAATGTTCCCTT-AAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTGATCAAAGGTAGCAAGCTCCTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60121879 296 - 72318688 AAAAGGTCTGCTTGTTCATATTGAGAAATTTGTGACGGGATTATA-----------------------AAGGCTGGAATGTTTAAAATATGTTCCAATCCTTTTTTGTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTCGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458168 296 - 1517660 AAAAGGGCTGCTTGTTCATATTGAGAAATTTGTGACGGGATTATA-----------------------AAGGCTGGAATGTTTAAAATATGTTCCAATCCTTTTTTCTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAGTTTGCTTTGTCACCAGA-ATTTACACATGTGACTTCGATTAA-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTGATCAAAGGTAGCAAGCTCCTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3553973 296 + 6513552 AAAAGGACTGCTTGTTCATATTGAGAAATTTGTCACGGGATTATA-----------------------AAGGCTGGAATGTTTAAAATATGTTCCAATCCTTTTTTGTACTGAGA-------AATTTCCATACATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAACTGCATTTCTCAATTTGCTTTGTCACCAGA-ATTTACACATGTGACTTTGATTAT-GCTAAACCAATGTTCCCTTAAAAAACTCAGATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCATCCTTCTTCTGGTATGAAGAAGGTTATCAAAGGTAGCAAGCTCCTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105334914 276 + 117903854 AAAAGGGATGCTTGTTCATACTGAAAAATTTATGAGTGGATTAT----------------------------CTGGACTGCTTAAAATATGTTCCAATCCTTTTTCGTATTGAGA-------GATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAATTGCATTTCCCAGTTTTCTTTGTCACCAGA-ATTTACACATGTGACTTCGGTTAT-GCTGATCCAGTGTTCCCTT-ATAAAAACATATTTGCTAGCAAGTTTATGAGGAAATAGAGCATGAGG------TTT--------GAAGAAGGTTATCAACAGTAGCAAGCTCCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512603 282 - 31320352 AAAAGGGCTGCTTGTTCATACTGAAAAATTTATGAGTGGATTATA-----------------------AAGACTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------GATTTTCATATATAT-----------------------------------------------------------------------CCTGCAGGGAATCTAATAAATTGCATTTCCCAGTTTTCTTTGTCACCAGA-ATTTACGCATGTGACTTTGGTTAT-GCTAAACCAGTGTTCCCTT-ATAAACTCATATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCAACCTTCT-------------AGGTTATCAACAGTAGCAAGCTCCTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1714897 295 + 2203405 AAAAGGGCTGCTTGTTCATACTGAAAAATTTATGAGTGGATTATA-----------------------AAGACTGGAATGCTTAAAATATGCTCCAATCCTTTTTTGTATTGAGA-------GATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAATTGCATTTCCCAGTTTTCTTTGTCAACAGA-ATTTACGCATGTGACTTCAGTTAT-GCTAAACCAGTGTTCCCTT-ATAAACTCATATTTGCTAGCAAGTTTATGAGGAAATAGGGCATGAGGCAACCTTCTTCTGGTGTGAAGAAGGTTATCAACAGTAGCAAGCTCCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662449 295 - 14941987 AAAAGGGCTGCTTGTTCATAATGAAAAATTTATGAGTGGATTATA-----------------------AAGACTGGAATGCTTAAAATATGTTCCAATCCTTTTTTGTATTGAGA-------GATTTCCATATATAT-----------------------------------------------------------------------CCTGCAGAGAATCTAATAAATTGCATTTCCCAGTTTTCTCTGTCATCAGA-ATTTACACATGTGACTTCGGTTAT-GCTAAACCAGTGTTCCCTT-ATAAACTCATATTTGCTAGCATGTTTATGAGGAAATAGGGCATGAGGCAACCTTCTTCTGGTTTGAAGAAGGTTATCAACAGTAGCAAGCTCCTG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111894204 298 + 195471971 TTGAAGGTTTTTTTAACTATTTGAGAAA-ACATGAGAACATTGTAGCAAATGCTTTTTTTTTTCTTTTAAGCTTTGAAAACCTAATATATACT--AATGGTTTTCT------AGACAATTTTGATTTCTACACATAT-----------------------------------------------------------------------CCTGTTGTGTATCAAATCAACT-CATTT--------------TCACCAGA-GTTGGCACATGTGACTTGGGCTAAGGACAAAATATCATTCTCTCAGGAAACTCAGACTTCCTGAAAAG-TTATGAGGGAGTAAGGTTTGAGTCATCTTTCT---GCTATGATGAGACACATCAAGGACAGC-AGCTTCCA i mm10.chr1 C 0 C 0 s canFam3.chr1 112364635 371 - 122678785 AAATAAGGTGTCTGCTTTTATTGGGAAATTTATGGGTGAATTATAGAAAACATTTTT-----------AAGTTTGGGTTGCCTAAATTATGTTGAAATCTTTCCTTGTGTTTTGA-------GGTTTCCTTGTGTTTTGAGGGTTGCCTAAATTATGTTGAAATCTTTCCTTGTGTTTTGAGGTTCCTTGTGTTTGAGGTTCTACATGTCTGCAGAGAACTTGATAACC--CATTTCTCAGTTTCCCTTGCCACTAGAGGTTTACACATGTGACTTAGGAAAT-GCCATACTAGCATTCCCTG-GGAAAGTTAGATTCACTAGCAAGTTTATGAGGAAATAGAACATGTGGCATCCTTCT---GGTGTGA---GTGGTTTCAGGGGCAGCAAGCTCCTG i canFam3.chr1 I 112 I 21 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=247649.000000 s hg38.chr18_GL383571v1_alt 191742 25 + 198278 AGGTGATGATGGTAGCCACAGATCC s panTro5.chr18 65101401 25 + 78221452 AGGTGATGATGGTAGCCACAGATCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220374 25 + 77229886 AGGTGATGATGGTAGCCACAGATCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439899 25 + 17472758 AGGTGATGATGGTAGCCACAGATCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139480968 25 - 152096393 AGGTGATGATGGTAGCCACAGATCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430710 25 + 70235451 AGGTGGTGATGATAGCCACAGACCC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63122048 25 - 75711847 AGGTGGTGATGATAGCCACAGACCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681454 25 - 18804593 AGGTGGTGATGATAGCCACAGACCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293143 25 + 18905526 AGGTGGTGATGATAGCCACAGACCC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60122175 25 - 72318688 AGGTGGTGATGGTAGCCACAGACCC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458464 25 - 1517660 AGGTGGTGATGATAGCCACAGACCC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3554269 25 + 6513552 AGGTGGTGATGACAGCCACAGACCC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105335190 25 + 117903854 AGGTGATGATGGTAGCCACAGATCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512885 18 - 31320352 AGGTGATGATGGTAGCCA------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715192 25 + 2203405 AGGTGATGATGATAGCCACAGATCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662744 25 - 14941987 AGGTGATGATGGTAGCCATAGATCC i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111894502 25 + 195471971 TGGCATTGGTGGTAATATCAACTCC i mm10.chr1 C 0 I 808 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=429785.000000 s hg38.chr18_GL383571v1_alt 191767 42 + 198278 TCCAGAGAGGCAGAGGCAGCAGAGTTCCAAGGTGAGTGACAG s panTro5.chr18 65101426 42 + 78221452 TCCAGAGAGGCAGAGGCAGCAGAGTTCCAAGGTGAGTGACAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220399 42 + 77229886 TCCAGAGAGGCAGAGGCAGCAGAGTTCCAAGGTGAGTGACAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439924 42 + 17472758 TCCAGAGAGGCAGAGGCAGCAGAGTTCCGAGATGAGTGACAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139480993 42 - 152096393 TCCAGAGAGGCAGAGGCGGCAGAGTTCCAAGGTGAGTGACAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430735 42 + 70235451 TCCAGAGAGGCAGAGGCAGCAGCGTTCCCAGGTGAGTGACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63122073 42 - 75711847 TCCAGAGAGGCAGAGGCAGCAGCGTTCCCAGGTGAGTGACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681479 42 - 18804593 TCCAGAGAGGCAGAGGCAGCAGCGTTCCCAGGTGAGTGACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293168 42 + 18905526 TCCAGAGAGGCAGAGGCAGCAGCGTTCCCAGGTGAGTGACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60122200 42 - 72318688 TCCAGAGAGGCAGAGGCAGCAGCATTCCCAGGTGAGTGACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458489 42 - 1517660 TCCAGAGAGGCAGAGGCAGCAGCGTTCCCAGGTGAGTGACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3554294 42 + 6513552 TCCAGAGAGGCAGAGGCAGCAGCGTTCCCAGGTGAGTGACAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105335215 42 + 117903854 TCCAGAGAGGCAGAGGCAGCAGAGTTCTGAGGTGAGGGACAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512903 40 - 31320352 --CAGAGAGGCAGAGGCAGCAGAGTTCCGAGGTGAGTGACAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715217 42 + 2203405 TCCAGAGATGCAGAGGCAACAGAATTCTGAGGTGAGTGACAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662769 42 - 14941987 TCCAGAAAGGCAGAGGCAGCAGAGTTCTGAGGTGAGTGACAG i aotNan1.NW_018502140v1 C 0 I 51 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=137726.000000 s hg38.chr18_GL383571v1_alt 191809 16 + 198278 CCACAGTCTTTTCCCC s panTro5.chr18 65101468 16 + 78221452 CCACAGTCTTTTCCCC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220441 16 + 77229886 CCACAGTCTTTTCCCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439966 16 + 17472758 CCACAGTCTTTTCCCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481035 16 - 152096393 CCACGGTCTTTTCCCC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430777 16 + 70235451 CCACAGTCTTTTCCCC i rheMac8.chr18 C 0 I 35 s macFas5.chr18 63122115 16 - 75711847 CCACAGTCTTTTCCCC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681521 16 - 18804593 CCACAGTCTTTTCCCC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293210 16 + 18905526 CCACAGTCTTTTCCCC i cerAty1.NW_012001075v1 C 0 I 35 s chlSab2.chr18 60122242 16 - 72318688 CCACAGTCTTTTCCCC i chlSab2.chr18 C 0 I 37 s manLeu1.NW_012106698v1 458531 16 - 1517660 CCACAGTCTTTTCCCC i manLeu1.NW_012106698v1 C 0 I 35 s colAng1.NW_012115433v1 3554336 16 + 6513552 CCACAGTCTTTTCCCC i colAng1.NW_012115433v1 C 0 I 35 s calJac3.chr13 105335257 16 + 117903854 GCATAGTCTTTCCCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512943 16 - 31320352 GCATAGTCTTTCCCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715259 16 + 2203405 GCATAGTCTTTCCCCT i cebCap1.NW_016107689v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662811 51 - 14941987 I a score=56190.000000 s hg38.chr18_GL383571v1_alt 191825 29 + 198278 GGAGG--GTTATGTAGAGTGTGttttttttt s panTro5.chr18 65101484 27 + 78221452 GGAGG--GTTAAGTAGAGTGTGttttttt-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220457 26 + 77229886 GGAGG--GTTAAGTAGAGTGtgtttttt--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5439982 31 + 17472758 GGGGGCAGTTATGTAGAGTGtgttttgttgt i gorGor5.CYUI01014964v1 C 0 I 5 s nomLeu3.chr4 139481051 28 - 152096393 AGGGGCAGTTATGTAGAGTGGGttcttt--- i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122131 31 - 75711847 AGGGGCAGTTATGTAGAATGGGCTTTTTTTC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681537 31 - 18804593 AGGGGCAGTTATGTAGAATGGGCTTTTTTTT i macNem1.NW_012016688v1 C 0 I 5 s calJac3.chr13 105335273 29 + 117903854 GGGGGCATTTACAGAGAGTGTGCTTTTTT-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512959 29 - 31320352 GGGGGCATATATGGAAAGtgttttttttt-- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715275 29 + 2203405 GGGGGCATTTATGGAGAGTGTGCTTTTTT-- i cebCap1.NW_016107689v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662811 51 - 14941987 I e colAng1.NW_012115433v1 3554352 35 + 6513552 I e manLeu1.NW_012106698v1 458547 35 - 1517660 I e chlSab2.chr18 60122258 37 - 72318688 I e cerAty1.NW_012001075v1 13293226 35 + 18905526 I e rheMac8.chr18 57430793 35 + 70235451 I a score=1332.000000 s hg38.chr18_GL383571v1_alt 191854 2 + 198278 tt s gorGor5.CYUI01014964v1 5440018 2 + 17472758 tc i gorGor5.CYUI01014964v1 I 5 C 0 s calJac3.chr13 105335302 2 + 117903854 TT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512988 2 - 31320352 tt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715304 2 + 2203405 TT i cebCap1.NW_016107689v1 C 0 I 7 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662811 51 - 14941987 I e colAng1.NW_012115433v1 3554352 35 + 6513552 I e manLeu1.NW_012106698v1 458547 35 - 1517660 I e chlSab2.chr18 60122258 37 - 72318688 I e cerAty1.NW_012001075v1 13293226 35 + 18905526 I e macNem1.NW_012016688v1 13681568 5 - 18804593 I e macFas5.chr18 63122162 0 - 75711847 C e rheMac8.chr18 57430793 35 + 70235451 I e nomLeu3.chr4 139481079 0 - 152096393 C e panPan2.chr18 64220483 0 + 77229886 C e panTro5.chr18 65101511 0 + 78221452 C a score=-11199.000000 s hg38.chr18_GL383571v1_alt 191856 48 + 198278 gttgttgtcgtttttttgttgttgttgtttttgttttttttttt-GTCT- s panTro5.chr18 65101511 48 + 78221452 gttgttgtcgtttttt-gttgtggtttttttttttttttttttttGTCT- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220483 41 + 77229886 gttgttgtcgttttt--gttgtggtttttttttgttttt------gtCT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440020 47 + 17472758 gttgttgttgttttt--gttttgtttttgtttttgtttttgttttgtCT- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481079 25 - 152096393 ------------ttt--g----ggttttttttttttttt------GTCT- i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122162 3 - 75711847 ----------------------------------------------CCC- i macFas5.chr18 C 0 I 1 s calJac3.chr13 105335304 5 + 117903854 -----------------------GTTT----------------------C i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19512990 27 - 31320352 -----------------------gtttttttttttttgtttttttttCCC i saiBol1.JH378121 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662811 51 - 14941987 I e cebCap1.NW_016107689v1 1715306 7 + 2203405 I e colAng1.NW_012115433v1 3554352 35 + 6513552 I e manLeu1.NW_012106698v1 458547 35 - 1517660 I e chlSab2.chr18 60122258 37 - 72318688 I e cerAty1.NW_012001075v1 13293226 35 + 18905526 I e macNem1.NW_012016688v1 13681568 5 - 18804593 I e rheMac8.chr18 57430793 35 + 70235451 I a score=401575.000000 s hg38.chr18_GL383571v1_alt 191904 40 + 198278 CTTAAAACTTCAGGTGAAAA-TCTATTCCTTCAGTCCTTTA s panTro5.chr18 65101559 40 + 78221452 CTTAAAACTTCAGGTGAAAA-TCTATTCCTTCAGTCCTTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220524 40 + 77229886 CTTAAAACTTCAGGTGAAAA-TCTATTCCTTCAGTCCTTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440067 40 + 17472758 CTTAAAACTTCAGGTGAAAA-TCTATTCCTTCAGTCCTTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481104 40 - 152096393 CTTAAAACTTCGGGTGAAAG-TCTATTCCTTCAGTCCTTTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430828 40 + 70235451 CTTAAAACTTCAGGTGAAAA-GCTATTCCTTCAGTCCTTTA i rheMac8.chr18 I 35 C 0 s macFas5.chr18 63122166 40 - 75711847 CTTAAAACTTCAGGTGAAAA-GCTATTCCTTCAGTCCTTTA i macFas5.chr18 I 1 C 0 s macNem1.NW_012016688v1 13681573 40 - 18804593 CTTAAAACTTCAGGTGAAAA-GCTATTCCTTCAGTCCTTTA i macNem1.NW_012016688v1 I 5 C 0 s cerAty1.NW_012001075v1 13293261 40 + 18905526 CTTAAAACTTCAGGTGAAAA-GCTATTCCTTCAGTCCTTTA i cerAty1.NW_012001075v1 I 35 C 0 s chlSab2.chr18 60122295 40 - 72318688 CTTAAAACTTCAGGTGAAAA-GCTATTCCTTCAGTCCTTTA i chlSab2.chr18 I 37 C 0 s manLeu1.NW_012106698v1 458582 40 - 1517660 CTTAAAACTTCAGGTGAAAA-GCTATTCCTTCAGTCCTTTA i manLeu1.NW_012106698v1 I 35 C 0 s colAng1.NW_012115433v1 3554387 40 + 6513552 CTTAAAACTTCAGGTGAAAA-GCTTTTCCTTCAGTCCTTTA i colAng1.NW_012115433v1 I 35 M 406 s calJac3.chr13 105335309 41 + 117903854 CTTAAAACCTCAGGTGAAAAATCTATTCCTTCAGTCCTTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19513017 41 - 31320352 CTTAAAACCTCAGGTGAAAAATCTATTCCTTCGGTCCTTTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715313 41 + 2203405 CTTAAAACCTCAGGTGAAAAGTCTATTCCTTCAGTCCTTTA i cebCap1.NW_016107689v1 I 7 C 0 s aotNan1.NW_018502140v1 3662862 41 - 14941987 CTTAAAACCTCGGGTGAAAAATCTATTCCTTCAGTCCTTTA i aotNan1.NW_018502140v1 I 51 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=20055.000000 s hg38.chr18_GL383571v1_alt 191944 2 + 198278 AC s panTro5.chr18 65101599 2 + 78221452 AC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220564 2 + 77229886 AC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440107 2 + 17472758 AC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481144 2 - 152096393 AC i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430868 2 + 70235451 AC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63122206 2 - 75711847 AC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681613 2 - 18804593 AC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293301 2 + 18905526 AC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60122335 2 - 72318688 AC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458622 2 - 1517660 AC i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105335350 2 + 117903854 AC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19513058 2 - 31320352 AC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715354 2 + 2203405 AC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662903 2 - 14941987 AC i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e colAng1.NW_012115433v1 3554427 406 + 6513552 M a score=41525.000000 s hg38.chr18_GL383571v1_alt 191946 8 + 198278 AATCCAGT s panTro5.chr18 65101601 8 + 78221452 AATCCAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220566 8 + 77229886 AATCCAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440109 8 + 17472758 AATCCAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481146 8 - 152096393 AATCCAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430870 8 + 70235451 AATCCAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63122208 8 - 75711847 AATCCAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681615 8 - 18804593 AATCCAGT i macNem1.NW_012016688v1 C 0 I 197 s cerAty1.NW_012001075v1 13293303 8 + 18905526 AATCCAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60122337 8 - 72318688 AATCCAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458624 8 - 1517660 AATCCAGT i manLeu1.NW_012106698v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M a score=37981.000000 s hg38.chr18_GL383571v1_alt 191954 14 + 198278 AAACTAACTTTCcc s panTro5.chr18 65101609 14 + 78221452 AAACTAACTTTCcc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220574 14 + 77229886 AAACTAACTTTCCC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440117 14 + 17472758 AAACTAACTTTCCC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481154 14 - 152096393 AAACTAACTTttcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430878 14 + 70235451 GAAATGATTttctt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63122216 14 - 75711847 GAAATGATtttctt i macFas5.chr18 C 0 C 0 s cerAty1.NW_012001075v1 13293311 14 + 18905526 GAAATGActttctt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60122345 14 - 72318688 GAAATGActttctt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458632 14 - 1517660 GAAATGACTTTCTT i manLeu1.NW_012106698v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e macNem1.NW_012016688v1 13681623 197 - 18804593 I a score=146475.000000 s hg38.chr18_GL383571v1_alt 191968 46 + 198278 ttccc----------------------tccttccttccttccttccttcctttc------------------------ttccttcctttctt s panTro5.chr18 65101623 70 + 78221452 ttccc----------------------tccttccttccttccttccttccttccctccttccttcctttcttccttccttccttccttTCtt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220588 92 + 77229886 TTCCCCCtccttccttctttccttccttccttccttccttccttccttccttccctccttccttcctttcttccttccttccttccttTCtt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440131 28 + 17472758 TTCCC----------------------TCCTTCCTTCCTTCCT------------------------------------------CCttctt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481168 54 - 152096393 ttcct----------------------tccttctttccttccttccttccttcc----------------ttccttccttccttccttcctt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430892 46 + 70235451 ttctc----------------------tccttccttccttccttcttttcttcc------------------------tccctttctttctt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63122230 46 - 75711847 ttctc----------------------tccttccttccttccttcttttcttcc------------------------tccctttctttctt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681820 46 - 18804593 ttctc----------------------tccttccttccttccttccttccttcc------------------------ttccttccttccCt i macNem1.NW_012016688v1 I 197 C 0 s cerAty1.NW_012001075v1 13293325 46 + 18905526 ttcct----------------------tccttccttccttccttccttccttcc------------------------ttccttccttcctt i cerAty1.NW_012001075v1 C 0 I 289 s chlSab2.chr18 60122359 44 - 72318688 ttcct----------------------tccttccttccttcctccct--ctttc------------------------tttctttctctctt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458646 46 - 1517660 ttcct----------------------tccttccttccttccttccttccttcc------------------------ttccttccttcctt i manLeu1.NW_012106698v1 C 0 I 253 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M a score=6876.000000 s hg38.chr18_GL383571v1_alt 192014 2 + 198278 tc s panTro5.chr18 65101693 2 + 78221452 tc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220680 2 + 77229886 tc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440159 2 + 17472758 tc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481222 2 - 152096393 tc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57430938 2 + 70235451 tc i rheMac8.chr18 C 0 I 604 s macFas5.chr18 63122276 2 - 75711847 tc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681866 2 - 18804593 tc i macNem1.NW_012016688v1 C 0 C 0 s chlSab2.chr18 60122403 2 - 72318688 tc i chlSab2.chr18 C 0 I 520 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e manLeu1.NW_012106698v1 458692 253 - 1517660 I e cerAty1.NW_012001075v1 13293371 289 + 18905526 I a score=12735.000000 s hg38.chr18_GL383571v1_alt 192016 12 + 198278 ctttttcttctt- s panTro5.chr18 65101695 12 + 78221452 ctttttcttctt- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220682 12 + 77229886 ctttttcttctt- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440161 12 + 17472758 ctttttcttctt- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481224 12 - 152096393 ctttttcttctc- i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122278 12 - 75711847 -tttctttctttc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681868 12 - 18804593 -tttttctttctt i macNem1.NW_012016688v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e manLeu1.NW_012106698v1 458692 253 - 1517660 I e chlSab2.chr18 60122405 520 - 72318688 I e cerAty1.NW_012001075v1 13293371 289 + 18905526 I e rheMac8.chr18 57430940 604 + 70235451 I a score=2548.000000 s hg38.chr18_GL383571v1_alt 192028 1 + 198278 t s panTro5.chr18 65101707 1 + 78221452 t i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220694 1 + 77229886 t i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440173 1 + 17472758 t i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481236 1 - 152096393 t i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122290 1 - 75711847 t i macFas5.chr18 C 0 I 237 s macNem1.NW_012016688v1 13681880 1 - 18804593 t i macNem1.NW_012016688v1 C 0 I 6 s chlSab2.chr18 60122925 1 - 72318688 t i chlSab2.chr18 I 520 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e manLeu1.NW_012106698v1 458692 253 - 1517660 I e cerAty1.NW_012001075v1 13293371 289 + 18905526 I e rheMac8.chr18 57430940 604 + 70235451 I a score=75702.000000 s hg38.chr18_GL383571v1_alt 192029 38 + 198278 tttttt-gagacggagtttcactgttgttacctaggctg s panTro5.chr18 65101708 39 + 78221452 tttttttgagatggagtttcactgttgttacctaggctg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220695 38 + 77229886 tttttt-gagatggagtttcactgttgttacctaggctg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440174 38 + 17472758 tttttt-gagacggagtttcgctcttgttgcctaggctg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481237 37 - 152096393 ttttt--gagacggagttttgctcttgttgcccaggccg i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122528 38 - 75711847 ttcttt-gagatggaatttagctcttgttgcccaggctg i macFas5.chr18 I 237 C 0 s macNem1.NW_012016688v1 13681887 38 - 18804593 ttcttt-gagatggaatttagctcttgttgcccaggctg i macNem1.NW_012016688v1 I 6 C 0 s chlSab2.chr18 60122926 38 - 72318688 tttttt-gagatggaatttagctcttgttgcccaggctg i chlSab2.chr18 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e manLeu1.NW_012106698v1 458692 253 - 1517660 I e cerAty1.NW_012001075v1 13293371 289 + 18905526 I e rheMac8.chr18 57430940 604 + 70235451 I a score=66896.000000 s hg38.chr18_GL383571v1_alt 192067 23 + 198278 gagtgcaatgg-ccc-gatctcagt s panTro5.chr18 65101747 23 + 78221452 gagtgcaatgg-ccc-gatctcagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220733 23 + 77229886 gagtgcaatgg-ccc-gatctcagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440212 23 + 17472758 gagtgcaatgg-ccc-gatctcagt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481274 24 - 152096393 gagtgcaatggcccc-gatctcggt i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122566 23 - 75711847 gagtgcaatgg-ccc-gatctcggc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681925 23 - 18804593 gagtgcaatgg-ccc-gatctcggc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293660 24 + 18905526 gagtgcaatga-cccggatctcggc i cerAty1.NW_012001075v1 I 289 C 0 s chlSab2.chr18 60122964 23 - 72318688 gagtgcaatgg-ccc-gatctcggc i chlSab2.chr18 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e manLeu1.NW_012106698v1 458692 253 - 1517660 I e rheMac8.chr18 57430940 604 + 70235451 I a score=398405.000000 s hg38.chr18_GL383571v1_alt 192090 109 + 198278 tcactgcaacctccacctcccaggttcaagcgattctcc-tgtttcagcct-cccgagtagctggaattacaggcatgtgccaccacaccc---ggcttattttgtatttttag s panTro5.chr18 65101770 109 + 78221452 tcactgcaacctccacctcccaggttcaagcgattctcc-tgtttcggcct-cccgagtagctggaattacaggcatgtgccaccacaccc---ggcttattttgtatttttag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220756 109 + 77229886 tcactgcaacctccacctcccaggttcaagcgattctcc-tgtttcagcct-cccgagtagctggaattacaggcatgtgccaccacaccc---ggcttattttgtatttttag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440235 109 + 17472758 tcactgcaacctccgcctcccaggttcaagcgattctct-tgtttcagcct-cccgagtagctggaattacaggcatgtgccaccacacct---ggcttattttgtattttcag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481298 109 - 152096393 tcacggcaacctctgcctcccaggtccaagcgattctcc-tgcttcagcct-ccggagtagctggaattacgggcatgcgccaccacacct---ggctaattttgtatttttag i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122589 109 - 75711847 tcaccgcaacctccacctcccaggttcaaacgattctcc-tgcttcagact-cccgagtagctggaattacaggcatgcaccaccgtgccc---ggcttattttgtatttttag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13681948 109 - 18804593 tcaccgcaacctccacctcccaggttcaaacgattctcc-tgcttcagact-cctgagtagctggaattacaggcatgcaccaccgtgccc---ggcttattttgtatttttag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293684 113 + 18905526 tcaccgcaacctccacctcccaggttcaagcggatctccatgcttcagactgcccgagtagctggaattacaggcatgcaccaccatgctccgggctttattttgta-ttttag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60122987 109 - 72318688 tcaccgcaacctccacctcccaggttcaagcgattcttc-tgcttcagact-cccgagtagctggaattacaggcatgcaccaccatgccc---ggcttattttgtatttttag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 458945 109 - 1517660 tcaccgcaacctccacctcccaggttcaagcgattctcc-tgcttcagact-cccgagtagctggaattacaggcatgcaccaccatgccc---ggcttattttgtatttttag i manLeu1.NW_012106698v1 I 253 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e colAng1.NW_012115433v1 3554427 406 + 6513552 M e rheMac8.chr18 57430940 604 + 70235451 I a score=565183.000000 s hg38.chr18_GL383571v1_alt 192199 119 + 198278 tagagacagggtttct--ccatgttggtcaggttggtctcgaactcctgacctcaggtgatccgcccgcctcggcctccaaaagtgctgggattacaggggtgagccactgcgcctggcTT s panTro5.chr18 65101879 119 + 78221452 tagagacagggtttct--ccatgttggtcaggttggtctcgaactcctgacctcaggtgatccgcccgcctcggcctccaaaagtgctgggattacaggggtgagccaccgcgcctggcTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220865 119 + 77229886 tagagacagggtttct--ccatgttggtcaggttggtctcgaactcctgacctcaggtgatccgcccgcctcggcctccaaaagtgctgggattacaggggtgagccaccgcgcctggcTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440344 119 + 17472758 tagaaacagggtttct--ccatgttggtcaggttggtctcgaactcctgacctcaggtgatccgcccgccttggcctccaaaagtgctgggattacaggggtgagccagcgcgcctggccT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481407 119 - 152096393 tagagacagggtttct--ccatattggtcaggctggtctcgaactcctgacctcaggtgatccgcccacctcggccttcctaagtgctgggattacaggggtgagccaccgtgcccggcTT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122698 119 - 75711847 tagagacagggtttct--ccatgttggtcaggctggtctcgaactcctgacctcaagtgatctacctgcctcagcctcccaaagtgctgggattacaggggtgagccaccgtgcccggccT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682057 119 - 18804593 tagagacagggtttct--ccatgttggtcaggctggtctcgaactcctgacctcaagtgatctacctgcctcagcctcccaaagtgctgggattacaggggtgagccaccgtgcccggccT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13293797 121 + 18905526 tagagacagggtttctccccatgttggtcaggctggtctcgaactcctgacctcaagtgatctacctgcctccgcctcccaaagtgctgggattacaggggtgagccaccgcgcccggccT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123096 119 - 72318688 tagaaacagggtttct--ccatgttggtcaggctggtctcgaacccctgacctcaagtgatctgcctgcctcagcctcccaaagtgctgggattacaggggtgagccaccgcgcccggccT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459054 119 - 1517660 tagagacagggtttct--ccatgttggtcaggctggtctcgaactcctgacctcaagtgatctacctgcctcagcctcccaaagtgctgggattacaggggtgagccaccacgcccggccT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3554833 119 + 6513552 tagagacagggtttct--ccatgttggtcaggctggtctcgaactcctgacctcaggtgatctacctgcctcagcctcccaaagtgctgagattacaggggtgagccactgcacccagccT i colAng1.NW_012115433v1 M 406 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335352 0 + 117903854 C e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e aotNan1.NW_018502140v1 3662905 0 - 14941987 C e cebCap1.NW_016107689v1 1715356 0 + 2203405 C e saiBol1.JH378121 19513060 0 - 31320352 C e rheMac8.chr18 57430940 604 + 70235451 I a score=262425.000000 s hg38.chr18_GL383571v1_alt 192318 30 + 198278 AATCCAGTGAACTTTCTGAAATCTGTTTAT s panTro5.chr18 65101998 30 + 78221452 AATCCAGTGAACTTTCTGAAATCTGTTTAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64220984 30 + 77229886 AATCCAGTGAACTTTCTGAAATCTGTTTAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440463 30 + 17472758 AATCCAGTGAACTTTCTACAATCTGTTTAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481526 30 - 152096393 AATCCAGTGAACTTTCTGAAATCCGTTTAT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63122817 30 - 75711847 AATCCAGTGAACTTTCTAAAATTCCTTTAT i macFas5.chr18 C 0 I 9 s macNem1.NW_012016688v1 13682176 30 - 18804593 AATCCAGTGAACTTTCTAAAATTCCTTTAT i macNem1.NW_012016688v1 C 0 I 9 s cerAty1.NW_012001075v1 13293918 30 + 18905526 AATCCAGTGAACTTTCTAAAATCCGTTTAT i cerAty1.NW_012001075v1 C 0 I 9 s chlSab2.chr18 60123215 30 - 72318688 AATCCAGTGAACTTTCTAAAATCCCTTTAT i chlSab2.chr18 C 0 I 9 s manLeu1.NW_012106698v1 459173 30 - 1517660 AATCCAGTGAACTTTCTAAAATCCCTTTAT i manLeu1.NW_012106698v1 C 0 I 9 s colAng1.NW_012115433v1 3554952 30 + 6513552 AATCCAGTGAACTTTCTAAAATCCCTTTGT i colAng1.NW_012115433v1 C 0 I 9 s calJac3.chr13 105335352 30 + 117903854 AATCCAGTGAACTTTCTAAAATCCCTTTGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19513060 30 - 31320352 AATCCAGTGAACTTTCTAAAATCCCTTTAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715356 30 + 2203405 AATCCAGTGAACTTTCTAAAATCCCTTTAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662905 30 - 14941987 AATCCAGTGAACTTTCTAAAATCCCTTTAT i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I e rheMac8.chr18 57430940 604 + 70235451 I a score=1662858.000000 s hg38.chr18_GL383571v1_alt 192348 176 + 198278 AGATTCCTTCTTGCGTACACTAGCTTAGTCTACAAGGATGCACCCTCAATAG-----TTCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGATAAGATGATACATTGATTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCT s panTro5.chr18 65102028 176 + 78221452 AGATTCCTTCTTGCATACACTAGCTTAGTCTACAAGGATGCACCCTCAATAG-----TTCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGATAAGATGATACGTAGGTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221014 176 + 77229886 AGATTCCTTCTTGCATACACTAGCTTAGTCTACAAGGATGCACCCTCAATAG-----TTCTTATTAGTTACCGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGATAAGATGATACGTAGGTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440493 181 + 17472758 AGATTCCTTCTTGCGTATACTAGCTTAGTCTACAACGATGCACCCTCAATAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGTTAAGATGATACATAGGTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481556 181 - 152096393 AGATTACTTCTCGCGTACACTAGCTTAGTCTACAACAATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGCTCCATCGTCAGATAAGATGATATGTAGGTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57431544 181 + 70235451 AGATTCCCTCTCACGTACACTAGCTTAGTCTACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGATAAGATGATACATAGCTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCC i rheMac8.chr18 I 604 C 0 s macFas5.chr18 63122856 181 - 75711847 AGATTCCCTCTCACGTACACTAGCTTAGTCTACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGATAAGATGATACATAGCTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCC i macFas5.chr18 I 9 C 0 s macNem1.NW_012016688v1 13682215 181 - 18804593 AGATTCCCTCTCACGTACACTAGCTTAGTCTACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG-TCTCTGAATTCCAGTTCCATCATCAGATAAGATGATACATAGCTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCC i macNem1.NW_012016688v1 I 9 C 0 s cerAty1.NW_012001075v1 13293957 179 + 18905526 AGATTCCCTCTCACGTACACTAGCTTAGTCCACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG---TCTGAATTCCAGTTCCATCATCAGATAAGATGATATGTAGCTTGGAATCTT--GTGTTTTCAGCAGATGCGTGCGGAATTCTCT i cerAty1.NW_012001075v1 I 9 C 0 s chlSab2.chr18 60123254 179 - 72318688 AGATTCCCTCTCACGTACACTAGCTTAGTCTACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG---TCTGAATTCCAGTTCCATCATCAGATAAGATGATATGTAGCTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCC i chlSab2.chr18 I 9 C 0 s manLeu1.NW_012106698v1 459212 179 - 1517660 AGATTCCCTCTCACGTACACTAGCTTAGTCCACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGTG---TCTGAATTCCAGTTCCATCATCAGATAAGATGATATGTAGCTTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCC i manLeu1.NW_012106698v1 I 9 C 0 s colAng1.NW_012115433v1 3554991 181 + 6513552 AGATTCCCTCTCTCGTACACCAGCTTAGTCTACAATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTACTGAACTTGGAGGCAATATTTTTGGGG-TCTCTGAATTCCAGTTCAATCATCAGATAAGATGATATGTAGTCTGGAATCTT--GTGTTTTCAGCAGATGTGTGTGGAATTCTCC i colAng1.NW_012115433v1 I 9 C 0 s calJac3.chr13 105335382 184 + 117903854 AGATTCCTTCTGGCACACACTAGCTTAGTCTACGATGATGCACCCTCAGTAGTGTACTGCTTATTAGTTGTTGAACTTGGAGGAAATACTTTTGATGTTCTCTGAATTCAGTTCCAACTATCAGATAAGATGATATATAGGTGTGAATCTTTGAGTTTTTTAATAGATGTTTGTTGAACTCTCT i calJac3.chr13 C 0 M 479 s saiBol1.JH378121 19513090 177 - 31320352 AGATTCCTTCTGGCACACACTAGCTTAGTCTACAATGATGCACCCTCGGTAGTGtactgcttattagttgttgaacttggaggaaatacttttggtg-tctctgaattccagttccactatcagataaaatgATATATAGGTGGGAATCTT--GTGTTTTTAATAGA----TGTTGAATTCTCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715386 181 + 2203405 GGATTCCTTCTGACACACACTAGCTTAGTCTACAATGATGTATCCTCAGTAGTGCACTGCTTATTCGTTGTTGAACTTGGAGGAAATACTTTTGGTG-TCTCTGAATTCCAGTTCCACTATCAGATATGATGGTATATAGGTGAGAATCTT--GTATTTTTAATAGATGTTTATTGAATTCTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3662935 181 - 14941987 AGATTCCTTCTGGCACACGCTAGCTTAGTCTACAATGACACACCCTCAGTAGTGTACTGCTTATTAGTTGTTGAACTTCGAGGAAATACTTTTGGTG-TCTCTGAATTCCAGTTCCACTATCAGATAAGATGATATATAGGTGGGAATCTT--GTGTTTTTAATAGATGTTTGTTGAATTCTCT i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=349124.000000 s hg38.chr18_GL383571v1_alt 192524 41 + 198278 CGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA s panTro5.chr18 65102204 41 + 78221452 CGATGTACTTCTGTGCATTGGTGATGTTGTATGATTCAGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221190 41 + 77229886 CGATGTACTTCTGTGCATTGGTGATGTTGTATGATTCAGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440674 41 + 17472758 CGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481737 41 - 152096393 CGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57431725 41 + 70235451 GGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123037 41 - 75711847 GGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682396 41 - 18804593 GGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13294136 41 + 18905526 GGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123433 41 - 72318688 GGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459391 41 - 1517660 GGATGTACTTCTGTACATTGGTGATGTTGTATGATTCAGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3555172 41 + 6513552 GGATGTACTTCTGTACATTGGTGATATTGTATGATTCAGAA i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19513267 40 - 31320352 TGATGTACTTCTCTACACTGG-TATGTTGTATGATTCAGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715567 41 + 2203405 TGATGCACTTCTCTACACTGGTTATGTTGCATGATTCGGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3663116 41 - 14941987 TGATGTACTTCTGCACACCAGTTATGTTATATGATTCAGAA i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335566 479 + 117903854 M e dasNov3.JH575754 543682 1646 - 2150887 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=66789.000000 s hg38.chr18_GL383571v1_alt 192565 7 + 198278 TTCACAT s panTro5.chr18 65102245 7 + 78221452 TTCACAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221231 7 + 77229886 TTCACAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440715 7 + 17472758 TTCACAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481778 7 - 152096393 TTCACAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57431766 7 + 70235451 TTCACAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123078 7 - 75711847 TTCACAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682437 7 - 18804593 TTCACAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13294177 7 + 18905526 TTCACAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123474 7 - 72318688 TTCACAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459432 7 - 1517660 TTCACAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3555213 7 + 6513552 TTCACAG i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19513307 7 - 31320352 TTCACAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715608 7 + 2203405 TTCACAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3663157 7 - 14941987 TTCACAG i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 545328 7 - 2150887 TCCACAG i dasNov3.JH575754 I 1646 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105335566 479 + 117903854 M e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=695979.000000 s hg38.chr18_GL383571v1_alt 192572 72 + 198278 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTACTTACCTAAGACC-AAACTTAATGATGC s panTro5.chr18 65102252 72 + 78221452 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTACTTACCTAAGACC-AAACTTAATGATGC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221238 72 + 77229886 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTACTTACCTAAGACC-AAACTTAATGATGC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440722 72 + 17472758 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTACTTACCTAAGACC-AAAATTAATGATGC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139481785 72 - 152096393 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTACTTACCTAGGACC-AAAATTAATGATGC i nomLeu3.chr4 C 0 I 304 s rheMac8.chr18 57431773 64 + 70235451 GGCTCACCATTGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATT-------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123085 64 - 75711847 GGCTCACCATTGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATT-------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682444 72 - 18804593 GGCTCACCATTGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATTAATGATGC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13294184 72 + 18905526 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATTAATGATGC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123481 72 - 72318688 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATTAATGATGC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459439 72 - 1517660 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATTAATGATGC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3555220 72 + 6513552 GGCTCACCATCGTCCCTCAAAGTCTCCATTACTTGGTTATCATTATTTACCTAGGACC-AAAATTAATGATGC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336048 73 + 117903854 GGTTCACCATAGTCCCTCACTGTCTCTATTACTTCGTTATCATTACTTACCTAGGACCAAAAATTAATGATGC i calJac3.chr13 M 479 C 0 s saiBol1.JH378121 19513314 73 - 31320352 CGTTCACCATAGTCCCTCAATGTCTCTATTACTTGGTTATAATTACTTACCTAGGACCAAAAATTAATGATGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715615 73 + 2203405 AGTTCACCATAGTCCCTCAATGTCTCTATTACTTGGTTATCATTACTTACCTAGGACCAAAAATTAATGATGC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3663164 73 - 14941987 GGTTCACCATAGTCCCTCAATGTCTCTATTACTTGGTTATCATTACTTACCTAGGACCAAAAATTAATGAGGC i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 545335 67 - 2150887 GGCT--CCACAATCCCT--GTGTCTCATCACCTTGGTTGTCA-TAGTTACCAGGAACC-AACCATCATGGTAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=587338.000000 s hg38.chr18_GL383571v1_alt 192644 64 + 198278 ATTTTCATCTTTCACATCCAAATTATG---------------TTAAAACATGTACAGATATAGAACATAAAAGTT----------------------AAAA-------- s panTro5.chr18 65102324 64 + 78221452 ATTTTCATCTTTCACATCCAAATTATG---------------TTAAACCATGTACAGATATAGAACACAAAAGTT----------------------AAAA-------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221310 64 + 77229886 ATTTTCATCTTTCACATCCAAATTATG---------------TTAAACCATGTACAGATATAGAACACAAAAGTT----------------------AAAA-------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440794 64 + 17472758 ATTTTCATCTTTCACATCCAAATTATG---------------TTAAACCATGTACAGATATAGAACATTAAAGTT----------------------AAAA-------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139482161 63 - 152096393 ATTTTCATCTTTCACATCCAAATTATG---------------TTAAACCATGTACAGATATAGAACATTAAAGTT-----------------------AAA-------- i nomLeu3.chr4 I 304 C 0 s rheMac8.chr18 57431837 46 + 70235451 ------------------CAAATTGTG---------------TTAAATCATGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123149 46 - 75711847 ------------------CAAATTGTG---------------TTAAATCATGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682516 64 - 18804593 ATCTTCATCTTTCACATCCAAATTGTG---------------TTAAATCATGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13294256 64 + 18905526 ATTTTCATCTTTCACATCCAAATTGTG---------------TTAAATCATGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123553 64 - 72318688 ATTTTCATCTTTCACATCCAAATTGTG---------------TTAAATCATGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459511 64 - 1517660 ATTTTCATCTTTCACATCCAAATTGTG---------------TTAAATAATGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3555292 64 + 6513552 ATTTTCATCTTTCACATCCAAATTGTG---------------TTAAATCGTGTACAGATATAGAACATTAAGGTT----------------------AAAA-------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336121 64 + 117903854 ATTTTAATCTTTCACATATAAATTATG---------------TTAAAGCATGTACACATATAGGACATTAAAGTT----------------------AAAA-------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19513387 64 - 31320352 ATTTTCATCTTTCACATACAAATTATG---------------TTAAACCATGTACAGATAGAGAATATTAAAGTT----------------------AAAA-------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715688 64 + 2203405 ATTTTCATCTTCCACATACAAATTGTG---------------TTAAACCATGTACAGATTTAGAAGATTAAAGTT----------------------AAAA-------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3663237 64 - 14941987 ATTTTCATCTTTCACATAAAAATTATG---------------TTAAACCATGTACAGATATAGAACATTAAAGTT----------------------AAAA-------- i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 545402 109 - 2150887 ATTTTCATCTTTCAGATCCAAATTATGGATCAGAAAATTATATTAAATCATTTGCAAATATAAAATATTAAAGTATCAACTTCAACAGAATGAGTGGAAAAGGTTAACA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111894527 808 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1891812.000000 s hg38.chr18_GL383571v1_alt 192708 188 + 198278 ACTTGGACAGAATTAGAGGAAAATTAATTTAGGAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACGTACATTTGTAGA------------------TAAGGGCC-TAAAAGCTATTGGGGTAGTTAGTG-CCAAGCTAAGCATAGACACATACATTTCTGGAAGTTTTATTATT---TTTTTCTTACATAAGGTCAAATGAACAATTATG s panTro5.chr18 65102388 188 + 78221452 ACTTGGACAGAATTAGAGGAAAATTAATTTAGGAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACATACATTTGTAGA------------------TAAGGGCC-TAAAAGCTATTGGGGTAGTTAGTG-CCAAGCTAAGCATAGACACATACATTTCTGGAAGTTTTATTATT---TTTTTCTTACATAAGGTCAAATGAACAATTATG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221374 188 + 77229886 ACTTGGACAGAATTAGAGGAAAATTAATTTAGGAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACGTACATTTGTAGA------------------TAAGGGCC-CAAAAGCTATTGGGGTAGTTAGTG-CCAAGCTCAGCATAGACACATACATTTCTGGAAGTTTTATTATT---TTTTTCTTACATAAGGTCAAATGAACAATTATG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5440858 188 + 17472758 ACTTGGACAGAATTAGAGGAAAATGAATTTAGGAAGGTA-GATGGCT--------AAAGCAGTTTTCTGCTTTACGTACATTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGAGGTAGTTAGTG-CCAAGCTAAGGATAGACACATACATTTCTGGAAGTTTTATTATT---TTTTTCTTACATAAGGTCAAATGAACAATTATG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139482224 188 - 152096393 ACTTGGACAGAATTAGAGGAAAATGAATTTAGGAAAATA-GATGGCC--------AAAGCAGTTTTCTGCTTTGCGTATGTTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGAAGTTTTATTATT---TTTTTCTTATATAAGGTCAAATGAACAATTATG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57431883 188 + 70235451 ACTTGGACAGAATTAGAGGAAAATGAATTTAGAAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACCTACATTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGATGTTTTATTTAT---TTTTTCTTAAATAAGGTCAAATGAACAATTATG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123195 188 - 75711847 ACTTGGACAGAATTAGAGGAAAATGAATTTAGAAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACCTACATTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGATGTTTTATTTAT---TTTTTCTTAAATAAGGTCAAATGAACAATTATG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682580 188 - 18804593 ACTTGGACAGAATTAGAGGAAAATGAATTTAGAAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACCTACATTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGATGTTTTATTTAT---TTTTTCTTAAATAAGGTCAAATGAACAATTGTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13294320 188 + 18905526 ACTTGGACAGAATTAGAGGAAAATGAATTTAGAAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACCTACGTTTGTAGA------------------TAAGGACC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGATGTTTTATTTAT---TTTTTCTTAAATAAGGTCAAATGAACAATTATG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123617 188 - 72318688 ACTTGGACAGAATTAGAGGAAAATGAATTTAGAAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACCTATGTTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGATGCATACATTTCTGGATGTTTTATTTAT---TTTTTCTTAAATAAGGTCAAATGAACAATTATG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459575 188 - 1517660 ACTTGGACAGAATTAGAGGAAAATGAATTTAGAAAGATA-GATGGCT--------AAAGTAGTTTTCTGCTTTACCTACGTTTGTAGA------------------TAAGGGCC-TAAAGGCTATTGGGGTAGTTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGATGTTTTATTTAT---TTTTTCTTAAATAAGGTCAAATGAACAATTATG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3555356 186 + 6513552 ACTTGGACAGAATTAAAGGAGAATGAATTTAGAAAGATA-GATGGCT--------AAAGCAGTTTTCTGCTTTACCTACGTTTGTAGA------------------CAAGGGCC-TAAAGGCTATTGGGGTAGCTAGTG-CCAAGCTAAGGATAGACGCATACATTTCTGGATGTTTTATT--T---TTTTTCTTAAATAACGTCAAATAAGCAATTATG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336185 190 + 117903854 ACTTGGAAAGAACTAGAGAATAAGAAATTTAGAAAGATA-GATGGCT--------AAAGCAATTTTCTGCCTTACCTACTTTTGTAGG------------------TAAGGGCC-TAAAGGCTATTGAGGTATTTAGTG-CCAAACTAAGGATAGACTCATACATTTCTGAAGGTTTTATTATTTT-TTTTTCTTACATAAGGTCAAATAGATAATTATG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19513451 208 - 31320352 ACTTGGTCAGAACTACAGAATAAGAGATTTAGAAAGATA-GATGGCT--------AAAGCAATTTTCTGCCTTACCTACTTTTGTAGGTAAGGGCCAAAAAGTAGATAAGGGCC-TAAAGGCTATTGGGGTATTTAGTG-CCAAGCTACAGATAGACTCATACATTTCTGAAGGTTTTCTTTATTT-TTTTTCTTACATAAGGTCAAATGGATAATTATG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715752 191 + 2203405 ACTTGGACAGAACTAGAGAATAAGAAATTTAGAAAGATA-GATGGCT--------AAAGGAATTTTCTGCCTTACCTACTTTTGTAGG------------------TAAGGGCC-TAAAGGCTATTGGGGTATTTAGTG-CCAAAATAAGGATAGACTCTTACATTTCTGAAGGTTTTACTTATTTATTTTTCTTACATAAGGTCAAATGGATAATTATG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3663301 187 - 14941987 ACTTGGACAGAACTAGAGAATAAGAAATTTAAAAAGATA-GATGGCT--------AAAGCAATTTTCTGCCTTACCTACTTTTGTAG-------------------TAAGGGCC-TAAAGGCTATTGGAGTATTTAGTG-CCAAACTAAGGATAGACTCATACATTTCTGAAGGTTTTATTTAT---TTTTTCTTACATAAGGTCAAATCGATAATTATG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111895335 170 + 195471971 ACTTGGAAAGAATAAGAATAAAAT-AATTCAGGGAGATATGATGGCT--------ACATCA------------------------AGAGAAAAAT-----------TAAGATCCAAAAAAGTTATAAAAGTGGTTGGTGATCATATTAAGAAAACAATAATGT-TGTCCCAAGTTTTTCTT--T---TTATTCTTACAGGATGTTGATTGAATCATTATA i mm10.chr1 I 808 C 0 s dasNov3.JH575754 545511 173 - 2150887 ACCTGGAAAAAATGAGAGGAAGAGCAATTTAGAGGGATACAATGGCTAAAACCAGAAAGCAGTT------------------------------------------TCAGGACT-AAAAGGCAATCAGAGTGGTGAGTG-CCAATATGGGAACAAAAGCATACATTTTCATTGATCTTTTCCTT---CTGTTTTTACATGAGGTCCATTGAATAGTTGTG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112365006 21 - 122678785 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=5624575.000000 s hg38.chr18_GL383571v1_alt 192896 533 + 198278 TTCCATCATGTACTTCACTCCCA---GATTCTGCTGTTACTGT-CCCTTCCCTTGGATGTGCTTAAGG-GTGACAGCTGCTAAACTTTATTTC-ATATTATCAGTTAACTTGTAACTACTCTGTATAATCTATACTATCTAAATAAAAGATTGAGCTTTCCAGGACCATGCTGATATTATTTAAAAGT---ATAAAATTTCAAGAATTGCACAGGGAA--AAAATAA----------------------AAC--AGATATTTAAAAGGTGCAGGCATCATGCTATATCACATTGCAGT-----GGAAGCAAATGATTATAAAtgacctcctgtgagatgtttaacctccctcagacacaa-ttttctctcctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat-aagagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTAACCCCTCAGAATCAATTAATA-GTTTATATATCAATTATGGAAGATGTCAATGTACATAAATAATAACACAACAAAAGG s panTro5.chr18 65102576 535 + 78221452 TTCCATCATGTACTTCACTCCCA---GATTCTGCTGTTACTGT-CCCTTCCCTTGGATGTGCTCAAGG-GAGACAGCTGCTAAACTTTATTTC-TTATTATCAGTTAACTTGTAACTACTCTGTATAATCTATACTATCTAAATAAAAGATTGAGCTTTCCAGGACCATGCTGATATTATTTAAAAGT---ACAAAATTTCAAGAATTGCACAGGGAA--AAAATAA----------------------AACTGAGATATTTAAAAGGTGCAGGCATCATGCTATATCACATTGCAGT-----GGAAGCAAATGATTATAAAtgacctcctgtgagatgtttaacctccctcagacacaa-ttttctctcctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat-aagagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTAACCCCTCAGAATCAATTAATA-GTTTATATGTCAATTATGGAAGATATCAATGTACATAAATAATAACACAACAAAAGG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64221562 535 + 77229886 TTCCATCATGTACTTCACTCCCA---GATTCTGCTGTTACTGT-CCCTTCCCTTGGATGTGCTCAAGG-GTGACAGCTGCTAAACTTTATTTC-TTATTATCAGTTAACTTGTAACTACTCTGTATAATCTATACTATCTAAATAAAAGATTGAGCTTTCCAGGACCATGCTGATATTATTTAAAAGT---ACAAAATTTCAAGAATTGCACAGGGAA--AAAATAA----------------------AACTGAGATATTTAAAAGGTGCAGGCATCATGCTATATCACATTGCAGT-----GGAAGCAAATGATTATAAAtgacctcctgtgagatgtttaacctccctcagacacaa-ttttctctcctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat-aagagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTAACCCCTCAGAATCAATTAATA-GTTTATATGTCAATTATGGAAGATATCAATGTACATAAATAATAACACAACAAAAGG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5441046 535 + 17472758 TTCCATCATGTACTTTACTCCCA---GATTCTGCTGTTACTGT-CCCTTCCCTTGGATGTGCTCAAGG-GTGACAGCTGCTAAACTTTATTTC-TTATTATCAGTTAACTTGTAATTACTCTGTATAATCTATACTATCTAAATAAAAGATCGAGCTTTCCAGGACCATGCTAATATTATTTAAAAGT---AC-AAATTTCAAGAATTGCACAGGGAA--AAAATAA----------------------AACTGAGATATTTAAAAGGTGCAGGCATCATGCTATATCACATTGCAGT-----GGAAGCAAATGATTATAAAtgacctcctgtgagttgtttaacctccctcagacacaatttttctgtcctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat-aagagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTAACCCCTCAGAATCAATGAATA-GTTTATATATCAATTATGGAAGATGTCAATGTACATAAATAATAACACAACAAAAGG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139482412 531 - 152096393 TTCCATCATGTACTTCACTCCCA---GATTCTGCTGTTACTGT-TCCTTCCCTTGGATGTGCTCAAGG-ATGACAGCAGCTAAACTTTATTTC-TTATTATCAGTTAACTTGTAACTACTCTGTATAATCTATACTATCTAAATAAAAGATTGAACTTTCCAGGACCATGCTGATATTATTTAAAAGT---ACAAAATATCAAAAATTGCACAGGGAA--AAAATAA----------------------AACTGAGATATTTAAAAGGTGCAGGCATCATGCTATATCACAGTGCAGT-----GGAAGCAGATGATTATAAAtgacctcctgtgagttgtttaacctccctcagacacag-ttttctctcttgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat-aagagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatattagttcc----tttaACCCCTCAGAATCAATTAGTA-GTTTATATGTCAATTATGGAAGATGCCAATGTACATAAATAATAACACAACAAAAGG i nomLeu3.chr4 C 0 I 287 s rheMac8.chr18 57432071 536 + 70235451 TTCCATCATGTACTTCACTCCCA-CAGATTCTGCTGTTACGGT-CCCTTCCCTTGGATGTGCTTAAGG-GTAACAGCAACTAAACTTTTTTTCTTTTTTATCAGTCAGCTTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCTAGGACCATGCTGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------AACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGT-----GGAAGCAAATGACTATAAAtgacctcctgtgagttgtttaacctccctcagacacga-ttttctcttctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat---gagaggtgctcagcaatattcttggcaatgagtgagcattcttcaaatgttagttcccttatCTTACCTCCCAGAATCAATTAATA-GTTTATACATCAATTATGGAAGATGTCAATGTACATAAATAATAACACAACAAAAGG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123383 536 - 75711847 TTCCATCATGTACTTCACTCCCA-CAGATTCTGCTGTTACGGT-CCCTTCCCTTGGATGTGCTTAAGG-GTAACAGCAACTAAACTTTTTTTCTTTTTTATCAGTCAGCTTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCTAGGACCATGCTGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------AACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGT-----GGAAGCAAATGACTATAAAtgacctcctgtgagttgtttaacctccctcagacacga-ttttctcttctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat---gagaggtgctcagcaatattcttggcaatgagtgagcattcttcaaatgttagttcccttatCTTACCTCCCAGAATCAATTAATA-GTTTATACATCAATTATGGAAGATGTCAATGTACATAAATAATAACGCAACAAAAGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13682768 536 - 18804593 TTCCATCATGTACTTCACTCCCA-CAGATTCTGCTGTTACGGT-CCCTTCCCTTGGATGTGCTTAAGG-GTAACAGCAACTAAACTTTTTTTCTTTTTTATCAGTCAAATTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCTAGGACCATGCTGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------AACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGT-----GGAAGCAAATGACTATAAAtgacctcctgtgagttgtttaacctccctcagacacga-ttttctcttctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat---gagaggtgctcagcaatattcttggcaatgattgagcattcttcaaatgttagttcccttatCTTACCTCCCAGAATCAATTAATA-GTTTATACATCAATTATGGAAGATGTCAATGTACATAAATAATAACAAAACAAAAGG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13294508 535 + 18905526 TTCCATCATGTACTTCACTCCCA-CAGATTCTGCTGTTACGGT-CCCTTCCCTTGGATGTGCTCAAGG-GTAACAGCAGCTAAACTTTATTTC-TTTTTATCAGTCAACTTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCCAGGACCATACAGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------GACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGT-----GGAAGCAAATGACTATAAAtgacctcctgtgagttgtttaacctccctcagacaaga-ttttctcttctgtgaaaatagagggagtcgtcaattaatacgtagggtaattacatatggcaaagtat---gagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTTACCTCCCAGAATCAATTAATA-GTTTATACATCAATTAGGGAAGATGTCAATATACATAAATAATAACACAACAAAAGG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60123805 535 - 72318688 TTCCATCATGTACTTCACTCCCA-CGGATTCTGCTGTTACGGT-CCCTTCCCTTGGATGTGCTCAAGG-GTAACAGCAGCTAAACTTTATTTC-TTTTTATCAGTCAACTTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCCAGGACCATGCTGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------AACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGT-----GGAAGCAAATGACTATAAACgacctcctgtgagttgtttaacctccctcagacaaga-ttttctcttctgtgaaaatagagggagtcatcaattagtatgtatggtaattacatatggtaaagtat---gagaggtgctcagcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTTACCCCTCAGAATCAATTAATA-GTTTATACATCAATTATGGAAGACGTCAATGTACATAAATAATAACACAACAAAAGG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 459763 535 - 1517660 TTCCATCATGTACTTCACTCCCA-CAGATTCTGCTGTTACGGT-CCCTTCCCTTGGATGTGCTCAAGG-GTAACAGCAGCTAAACTTTATTTC-TTTTTATCAGTCAACTTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCCAGGACTATGCAGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------GACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGA-----GGAAGCAAATGACTATAAAtgacctcccgtgagttgtttaacctccctcagacaaga-ttttctcttctgtgaaaatagagggagtcatcaattaatacgtagggtaattacatatggtaaagtat---gagaggtgctgggcaatattcttggcaatgagtgagcattctccaaatgttagttcccttatCTTACCTCCCAGAATCAAGTAATA-GTTTATACATCAATTATGGAAGATGTCAATGTACATAAATAATAACACAACAAAAGG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3555542 535 + 6513552 TTTCATCATATGCTTCACTCCCA-CAGATTCTGCTGTTATGAT-CCCTTCCCTTGGATATGCTCAAGG-GTAACAGCAGCTAAACTGTATTTC-TTTTTATCAGTCAACTTGTAACTACTCTGTATAATCTATACTATCTAAAGAAAAGATTGAACTTTCTGGGACCATGCTGATATTATTTAAAAGT---ACAAAATATCAAATATTGCACAGGGAA--AAAATAA----------------------AACTCAGATATTTAAAAAGTGCAGGCATCATGCTATATCACAGTGCAGT-----TGAAGTAAATGACTATAAATGACCTCCTTTGAGTTGTTCAACCTCCCTCAGACAAGA-TTTTCTCTTCTGTGAAAATAGAGGGAGTCATCAATTAATACGTAGGGTAATTACATATGGTAAAGTAT---GAGAGGTGCTCAGCAATATTCTTGGCAATGAGTGAGCATTCTCCAAATGTTAGTTCCCTTATCTTACCTCTCAGACTCAATTAATA-GTTTATACATCAATTATGGAAGATGTCAGTGTACATAAATAATAACACAACAAAAGG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336375 531 + 117903854 TTCCATCATGAACTTTCCTCCCA-CAAATTCTGCTGTTGCTGTCCCCTCCCCTTGGAGGTGCTCAAGA-GTGATAGCAGCTAAACGTTATTTC-TTTTTATCAGTTAATTTGTAACTACTCTGTATAATCCA---TATCTAAATAAAAGACTGAATTTTCCAGGGCAATGCTGATATTATTTAAAAGT---ACAAAATATCAAAAGTTGCACAGGGAA--AAAATAA----------------------AACTCACATATTTAAAAGGTGCAGGCATCATGCCATATTACAGTGCAGT-----GGAAACGAATGACTATAAATATCTTCCTG-----TGTttaacctcccacagacacag-ttttctcaactgtgaaaatagagggagtcatcagttaagacttagggttattatatggggcaaagtccaaagagaagtgctcagcaatattcttggcaatgagtgagtattttttaagttttagttcccttaGCCTGCCCCTCAGGATCAATGAATA-GTTTATACATCAATTATGGAAGATGTCAACTTACATAAATAATTGTACAACAaaagg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19513659 526 - 31320352 TTCTGTCATGTACTTCTCTCCCA-CAGATTCTGCTGTTACTGTCCCCTTGCCTTGGAGGTACTCAAGG-GTGATAGCTGCTAAACTTTATTTC-TTTTTAGCAGTTAATTTGTACCTACTCTGTATAATCTA---TATCTAAATAAAAGAGTGAATTTTCCAGGATAATGCTGATATTGTTCAAAAGT---ACAAAATACCAAAAGTTGCACAGGGAA--AAAATAA----------------------AACTCATATATTT-AAAGGTGCAGGCATGATGCCATATCACAGTGCAGT-----GGAAACAAATGACTATGAATGATTTCCTGTGAGCTGTTTAGCCTCCTACAG--ACAG-CTTTCT---CTGTGAAAATAGAGGGATTCATCAGTTAAGACTTAGGGTAATTATATAGTGCAAAGTCCAAAGAGAAGTGCTCAGCAATATTCTCTGCAATGAGTGAGTA-TTCTTAAGTGTTAGTTCCCTTATCCTGACCCTCAGGATCAATTAATA-GTTTTTACATCAATTATGGAAGATGTCAACTTACATAAATAA---TACAACAAAAGG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1715943 526 + 2203405 TTCCATCATGTACTTCCCTCCCA-CAGATTCTGCTGTTACTGTCCCCTTCCCTTGGAGGTGCTCAAGG-GCGATAGCAGCTAAACTTTATTTC-TTTTTAGCAGTTAATTTGTAACTACTCTGTATAATCCA---TATCTACATAAAAGATTGAATTTTCCAGGACAATGCTGATATTATTCAAAAGT---ACAAAATACCAAAAGCTGCACAGGG-A--AAAATAA----------------------AACTCATATTTTTAAAAGGTACAGGCATCATGCCATATTACAGTGCAGT-----GGAAACAAATGACTATGAATGACTTCCTGTGAGCTGTTTAGCCTCCCACAA--ACAG-CTTTCT---CTGTGAAAATAGAGGGAGTCATCAGTTAAGACTTAGGGTACTTATATAGGGCAAAGTCCAAAGAGAAGTGCTCAGCAATATTTTTGGCAATGAGTGAGTG-TTCTTAAGTGTGAGTTCCCTTATCCTGACCCTCAGGATCAATTAATA-GTTTATACATCAATTATGGAAGATGTCAACTTACATAAATAA---TACAACAAAAGG i cebCap1.NW_016107689v1 C 0 I 2 s aotNan1.NW_018502140v1 3663488 535 - 14941987 TTCCATCATGTACTTCCCTCCCA-CAGATTCTGCTGTTACTGTCCCCTCCCCTTGGAGGTGCTCAAGG-ATGATAGCAGCTAAACTTTATTTC-TTTTTATCAGTTAATTTGTAACTACTCTGTATAATCCG---TATCTAAATAAAAGATTGAATTTTCCAGGACAACGCTGATATTATTTAAAAGT---ACAAAATATCAAAAGTTGCACAGGGAA--AAAATAA----------------------AACTCATATATTTAAAAGGTGCAGGCATCATGCCATATCACAGTGCAGT-----GGAAACAAATGACTATAAATGACTTCCTTTGagctgtttaacctcccacagacacag-ttttctcaactgtgaaaatagagggagtcatcagttaagacttagggttattacatagggcacagttcaaagagaagtgctcagcaatattcttggcaatgagtgagtattttttaagtgttagctcccttatCCTG-CCATCAGGATCAATTAATA-GTTTATACATCAATTATGGAAGATGTCAACTTACATAAATAATAGTACAACAaaagg i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111895505 473 + 195471971 TCCCACCACAAACTTACTTCTTA-CAGATTTT------------TCCTTCATTTGACACTTCCTGAAA---AATAACAGCTGAACATGATTTC-CTTTCATT--TCAA----TATCTGCTGTGCACA------------------------TGA----TCTAGAATCCTACTAAAATAATTT--AGGT---CATATATATGTAAAATCTTACAGTAAAGTAACAAAA----------------------AACATAGGTGCTTGAACAATGCAAGCATAAAGCTTGATGAAA--------------AAAAAAATGACCAT-CATGACATTTTGTGGTC---TTAACTTCTGTCAGCTATAT-TTTTCTCAACCGTG-AAATAAATGGAGCCATTAATGAATTCTCAAGGTAGTTATGTTTAGAGCAATCCAAAGAGAGATGCTTAGTTTTATTTTTGGTAATGAATGACCAGTCTGCAAATATTAACTCTCTTTATCACACCTGCAGGACCAATTACTATTTTTATACAAGTGTTATAGGAAATAGTAATCTAAAT-AATAAAAACATTTCAA---- i mm10.chr1 C 0 C 0 s canFam3.chr1 112365027 541 - 122678785 TTCCACTGTGTGCTTCATTCCCATTAAACTGTGCTTCCATGGT-CTCTTCC---AGAAGCACTCAACGCTTAAGAGCAGTTAAGCTTAATTTC-TTTTTATCACTTGCATTCTAACTCTTCTGTGTAGTCCATCCTACTGAAATCGAAGATCAAACTTTCTGGAACCATGCCGATATTATTTAAAAGTGAAAAAAAAAATCTGAGGTTGCACGGGG-A--AAAATAA----------------------CATTGAGATATTTAACAGATGCAAACATCATGGTATTTCATGGTGCAATGGGAGGGAAAGAAATGACCACAGgtgaccccaagtgagttatttgacttcccttagccacac-ttctttcaaccatgaaaataaatggatctatcaataaatacttacggtaattatgtatggtaaagtacaaatagaaatgcttaccaacgatcatggcaaatggtgtgcattctgtaaatgttCA-TCTTTTTTCATACCCCTAAGGATCAATTAATA-GTTTATACATCTACTGCAGTAGAT--TAATTGGCATGAATGACAGGACAATGTAAAG i canFam3.chr1 I 21 C 0 s dasNov3.JH575754 545684 533 - 2150887 TTCCATCATGAGCTTCCTTCCCA-CAGATTCAGCTTTCATGGT-CCTTTCTATACAGAATTGTGAACG-CTAAGAGCAGCTAAGCTGAAGTTC----TTAACCGTTACCTTCTAATT-CTTTGTTGGCTCTGTGCTATCCAAACCAAAAATTAAATTCCCCAGAATGATGGTGATATTATTTTAAAGT---GAAAAACACATATAATCTCATGGTAAA--AAAACAAACAAACAAACAAAAAAAACAGCAGCGGAAATATTTAAAAGATACAAAGAGCGTGCTCTTTCCGAGTGCGAT-----AAAAAGAAATGACTACACAGTGTGTGC-GTGAGG---TTAAGCTCCTTCAGTCTCAG-TGTTCTCAACTGCGAAAACAAACAGGGCCATC-GTAAATACTTAAAGTCGTCACGTGCAGCCAGGTCTAAACAGAGGGGCTTAGCACC-TTCTTGGCAATGAGTGTGGATTCTGTAAATGCTAGTTCTCTTATCCTGCCTCTCAGGAC----------GTTT--------GTCAGAGAAGATGTTAAGCTGTATAAATAATAGGAgaacaaaaag i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=23606.000000 s hg38.chr18_GL383571v1_alt 193429 3 + 198278 aag- s panTro5.chr18 65103111 3 + 78221452 aag- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222097 3 + 77229886 aag- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5441581 3 + 17472758 aag- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483230 3 - 152096393 aag- i nomLeu3.chr4 I 287 C 0 s rheMac8.chr18 57432607 3 + 70235451 aag- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123919 3 - 75711847 aag- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683304 3 - 18804593 aag- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295043 3 + 18905526 aag- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124340 3 - 72318688 aag- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460298 3 - 1517660 aag- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556077 3 + 6513552 aag- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336906 3 + 117903854 aaa- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19514185 3 - 31320352 aaa- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1716471 3 + 2203405 aaa- i cebCap1.NW_016107689v1 I 2 C 0 s aotNan1.NW_018502140v1 3664023 3 - 14941987 aaa- i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111895978 3 + 195471971 AGA- i mm10.chr1 C 0 C 0 s canFam3.chr1 112365568 3 - 122678785 AAT- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 546217 3 - 2150887 -agc i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=127192.000000 s hg38.chr18_GL383571v1_alt 193432 13 + 198278 aaattgatatcag s panTro5.chr18 65103114 13 + 78221452 aaattgatatcag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222100 13 + 77229886 aaattgatatcag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5441584 13 + 17472758 aaattgatatcag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483233 13 - 152096393 aaattgaaatcag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57432610 13 + 70235451 aaattgaaatcag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123922 13 - 75711847 aaattgaaatcag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683307 13 - 18804593 aaattgaaatcag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295046 13 + 18905526 aaattgaaatcag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124343 13 - 72318688 aaattgaaatcag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460301 13 - 1517660 aaattgaaatcag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556080 13 + 6513552 aaattgaaatcag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336909 13 + 117903854 acattgaaatcaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19514188 13 - 31320352 aaaatgaaatcaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1716474 13 + 2203405 aaattgaaatcaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3664026 13 - 14941987 aaattgaaatcaa i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111895981 13 + 195471971 AAATATAAAACAT i mm10.chr1 C 0 C 0 s canFam3.chr1 112365571 13 - 122678785 ATATGGGTAAAAG i canFam3.chr1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 546220 0 - 2150887 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=974185.000000 s hg38.chr18_GL383571v1_alt 193445 100 + 198278 aatcttgaaaagataccggccctcccatgttctttgtggcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaatgaatgggc s panTro5.chr18 65103127 100 + 78221452 aatcttgaaaagataccggcactcccatgttctttgtggcattatctgcaatagcaaagatctagaaacaacctaaata----tccatcagtaaatgaatgggc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222113 100 + 77229886 aatcttgaaaagataccggcactcccatgttctttgtggcattatctgcaatagcaaagatctagaaacaacctaaata----tccatcagtaaatgaatgggc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5441597 100 + 17472758 aatcttgaaaagataccgacactcccatgttctttgtggcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaattaatgggc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483246 100 - 152096393 aatcttgaaaagataccggcacccccatgttctttgtggcattatctgcaatagttaagatctagaaacaacctaaata----tccatcagtaaatgaatgggt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57432623 97 + 70235451 aatcttgaaaagat---agcactcccatgttctttgcagcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaatgaatgagt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63123935 97 - 75711847 aatcttgaaaagat---agcactcccatgttctttgcagcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaatgaatgagt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683320 100 - 18804593 aatcttgaaaagataccagcactcccatgttctttgcagcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaatgaatgggt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295059 100 + 18905526 aatcttgaaaagatacgagcactcccatgttctttgcagcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaatgaatgggt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124356 100 - 72318688 aatcttgaaaagataccagcgctcccatgttctttgcagcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaacgaatgggt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460314 100 - 1517660 aatcttgaaaagataccagcactcccatgttctttgcagcattatctgcaatagctaagatctagaaacaacctaaata----tccatcagtaaatgaatgggt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556093 100 + 6513552 aatcttgaaaagataccggcactcccatgttctttgcagcattatctgcaatagttaagatctagaaacaacctaagta----tccatcagtaaatgaatgggt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105336922 100 + 117903854 aatcgtgaaaagataccagcagtctcatgttctttgcaacattatttgcaatagataaaatcgagaaacagcctaaata----tcattcagtaaatgaatgggt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19514201 100 - 31320352 aattgtgaaaatataccggcagtctcatgttctttgcaacattatttgcaatagataagatcgagaaaccacctaaata----tcaataagtaaatgaatgggt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1716487 100 + 2203405 aatggtgaaaatatactggcagtctcatgttctttgcaacattatttggaatagataagattgagaaacaacctaaata----tcaatcagtaaatgaatgggt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3664039 100 - 14941987 aattgtgaaaagataccagcagtctcatgttctttgcaacattatttgcaatagataagatcgagaaacaacctaaata----tcaatcagtaaatgaatgggt i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111895994 101 + 195471971 AATCATAAATAAATACCTTCTCTCTTATGTTTTCCA-AGCACTA--TACAATAGTTAAAATATGTACTCAAATTATTTACTATTAGATTAGTGTATGTGTGGGC i mm10.chr1 C 0 I 2962 e micMur3.chr19 41564803 337 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 546220 0 - 2150887 C e canFam3.chr1 112365584 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=3088942.000000 s hg38.chr18_GL383571v1_alt 193545 312 + 198278 aaagaaaata--tgtgtgtgtattcatgtaaatataaaatggaatattattccacaataaaaatggcaatcctctcatttgagacaacacagatgggcagggaggacattatgctaggtgaaataagtcagacacagaaaatcaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcgtagaagcagagagtacaatggtggttaccaggatatatgggcatgggggcaagaatgaagaaatgatggtcaaagggtacaaagtttcagttatgcaggaaaatgaagtttgggtatatat s panTro5.chr18 65103227 312 + 78221452 aaagaaaata--tgtgtgtgtattcacgtaaatataaagtggaatattattccaaaataaaaatggcaatcctctcatttgagacaacacagatgggcagggaggacattatgctaggtgaaataaatcagacacagaaaatcaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcgtagaagcagagagtacaatggtggttaccaggatatatgggcatgggggcaagaatgaagaaatgatggtcaaagggtacaaagtttcagttatgtaggaaaatgacgtttgggtatatat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222213 312 + 77229886 aaagaaaata--tgtgtgtgtattcacgtaaatataaagtggaatattattccacaataaaaatggcaatcctctcatttgagacaacacagatgggcagggaggacattatgctaggtgaaataaatcagacacagaaaatcaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcgtagaagcagagagtacaatggtggttaccaggatatatgggcatgggggcaagaatgaagaaatgatggtcaaagggtacaaagtttcagttatgtaggaaaatgacgtttgggtatatat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5441697 312 + 17472758 aaagaaaata--tgtgtgtgtattcacgtaaatataaaatggaatattattccacaataaaaatggcaattctctcatttgagacaacacagatgggcagggaggacattatgctaggtgaaataaatcagacacagaaaatcaaagagcagatcatcttgcttagatgtaaaatctaaaatagtcaaactcgtagaagcagagagtacaatggtggttaccaggatatatgggcatgggggcaagaataaagaaatgatggtcaaagggtacaaagtttcagttatgcaggaaaatgaagtttgggtatatat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483346 312 - 152096393 aaagaaaata--tgtgtgtgtattcacataaatataaaatggaatattattccacaataaaaatggcaatcctctcatttgagacaacacagatgggcagggaggacattatgctaggtgaaataaatcagacatagaaaatcaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcatagaagcagagaatacaatggtggttaccaggatatatgggcgtgggggcgagaatgaagaaatgatggtcaaagggtacaaagtttcagttatgcaggaaaatgaagtttggatatatat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57432720 312 + 70235451 aaagaaaata--cgtgtgtgtgttcacataaatataaaatggaatattattctacaataaaaatggcaatccacccatctgagacaacacagatgggcagggaggacattatgctaggtcaaataaatcagacacagaaaattaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtcggggcgagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaatgaggtttggatatatat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124032 312 - 75711847 aaagaaaata--cgtgtgtgtgttcacataaatataaaatggaatattattctacaataaaaatggcaatccacccatctgagacaacacagatgggcagggaggacattatgctaggtcaaataaatcagacacagaaaattaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtcggggcgagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaatgaggtttggatatatat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683420 312 - 18804593 aaagaaaata--cgtgtgtgtgttcacataaatataaactggaatattattctacaataaaaatggcaatccacccatctgagacaacacagatgggcagggaggacattatgctaggtcaaataaatcagacacagaaaattaaatagcagatcatcttgcttacatgtaaaatctagaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtcggggcgagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaatgaggtttggatatatat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295159 312 + 18905526 aaagaaaata--tgtgtgtgtgttcacataaatataaaatggaatattattctacaataaaaatggcaatccacccatctgagacaacacagatgggcagggaggacattatgctaggtcaaataaatcagacacagaaaattaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtcggggcgagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaacgaggtttggatatatat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124456 314 - 72318688 aaagaaaatatgtgtgtgtgtgttcacataaatacaaaatggaatattattccacaataaaaatggcaatccacccatttgagacaacacagatgggcagggaggacattatgctaggtcaaataaatcagacacagaaaatcaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtccgggcgagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaattaggtttggatatatat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460414 312 - 1517660 aaagaaaata--tgtgtgtgtgttcacataaatataaaatggaatattattctacaataaaaatggcaatccacccatctgagacaacacagatgggcagggaggacattatgctaggtcaaataaatcagacacagaaaattaaatagcagatcatcttgcttacatgtaaaatctaaaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtcggggcgagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaacgaggtttggatatatat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556193 312 + 6513552 aaagaaaata--tgtgtgtgtgttcacataaatataaaatggaatattattccacaataaaaatggcaatcctctcatttgagacaacacagatgggcagggaggacattatgctaggtgaaataaatcagacacaaaaaatcaaatagcagatcatcttgcttacatgtaaaatctgaaatagtcaaactcataaaagcagagagtacaatggtggttaccaggagatatgggcgtgggggcaagaatgaagaaatgagggtcaaagggtacaaagtttcagttatgcaggaaaataaggtttggatgaatat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337022 312 + 117903854 aaagagaata--tgtgggggtattcacataaatagaaaatggaatattattccacaataaaaatggaaatcctcacatctgagacaacacagatgggcaaggaggacattatgctaagtgaaataaattagacacagaaaaccaaatagcagatcctctctcttacatataaaatttaaaatagtcaaattcatggaagcagagagtacaatggtggttaccaggagatatgcgggtggggccgagaatgaagagatgacggtgaaagggtacaaagtttctgttatgcaggaaaatgaagtttggagatatat i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19514301 312 - 31320352 aaagaaaata--tgtgtgtgtattcacataaatagaaaatggaatattattccacaataaaaatggaaatcttctcatctgagacaacacagatgggcagggaggacattatgctaagtgaaataaatcagacacagaaaatcaaatagcagatcctctcacttacatataaaatctaaaatagtcaaactcctggaagcagagagtacaatggtggttaccaggacatatgccagtggggccaagaatgaagagatgatggtgaaagggtacaaagtttctattattcaggaaaatgagctctggagatatgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1716587 312 + 2203405 aaagaaaata--tgtgtgtgtattcacataaatagaaaatggaatattattccacaataaaaatggaaatcttctcatctgagacaacacagatgggcagggaggacattatgctaagtgaaataaatcagacacagaaaatcaaatagcagatcctctcacttacgtataaaatctaaaatagtcaaattcatggaggcagagagtacaatggtggttaccaggacatatgtgggtggggccaagaatgaagagatgatggtaaaagggcacaaagtttcgattatgcaggaaaaggaagtttGTCCATATAT i cebCap1.NW_016107689v1 C 0 I 13 s aotNan1.NW_018502140v1 3664139 310 - 14941987 aaagaaaata--tgtgtgtgtattcacataaatagaaaatggaatattattccacagtaaaaatggaaatcctctcatctgagacaacatagatgggcagagaggacattatgctaagtgaaataaatcagacacagaaaatcaaatagcagatcctctcgcttacatataaaatttaaaatagtcaaactcacggaagcagagagtacaatggtggttaccaggagatatgcaggtggtgtcgagaatgaagagatgatggtgaaagggtacaaagtttcggttatgcaggaaaatgaagtttggagatat-- i aotNan1.NW_018502140v1 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 546220 0 - 2150887 C e canFam3.chr1 112365584 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=92797.000000 s hg38.chr18_GL383571v1_alt 193857 17 + 198278 taatat----------acatatacagt s panTro5.chr18 65103539 17 + 78221452 taatat----------acatatacagt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222525 17 + 77229886 taatat----------acatatacagt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442009 17 + 17472758 taatat----------acatatacagc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483658 17 - 152096393 taatat----------acatatacagt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433032 17 + 70235451 taatat----------acatatacagt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124344 17 - 75711847 taatat----------acatatacagt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683732 17 - 18804593 taatat----------acatatacagt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295471 17 + 18905526 taatat----------acatatacagt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124770 17 - 72318688 taatat----------acatatacagt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460726 17 - 1517660 taatat----------atatatacagt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556505 17 + 6513552 taatat----------acatatacagt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337334 25 + 117903854 --atatatacatatacatatatgtata i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19514613 4 - 31320352 --atat--------------------- i saiBol1.JH378121 C 0 I 1 s aotNan1.NW_018502140v1 3664449 11 - 14941987 ----------------atatatgtata i aotNan1.NW_018502140v1 C 0 I 2 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 546220 0 - 2150887 C e canFam3.chr1 112365584 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I e cebCap1.NW_016107689v1 1716899 13 + 2203405 I a score=1150260.000000 s hg38.chr18_GL383571v1_alt 193874 119 + 198278 atatattaatagcatagtacttatagctaataatactAttag--gttggtgcaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattacttttaagatggtagattt s panTro5.chr18 65103556 119 + 78221452 atatattaatagcatagtacttatagctaataatactAttag--gttggtgcaaaagta-attgtgactttaccattgaaagtaatatcaaaaacctcaattacttttaagacggtagattt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222542 119 + 77229886 atatattaatagcatagtacttatagctaataatactAttag--gttggtgcaaaagta-attgtgactttaccattgaaagtaatatcaaaaacctcaattacttttaagacggtagattt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442026 119 + 17472758 atatattaatagcatagtacttatagctaataatactAttag--gttggtgtaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattacttttaagacggtaggttt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483675 119 - 152096393 atatattaatagcacagtacttgtagctaataatactattag--gttggtgcaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattacttctaagacggtagattt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433049 119 + 70235451 atatattaatagcatagttcttatagctaataatactgttag--gttggtgcaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattactCCtaagacagtagattt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124361 119 - 75711847 atatattaatagcatagttcttatagctaataatactgttag--gttggtgcaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattactCCtaagacagtagattt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683749 119 - 18804593 atatattaatagcatagtgcttatagctaataatactgttag--gttggtgcaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattactCCtaaaacagtagattt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295488 120 + 18905526 atatattaatagcatggtgcttatagctaataatactAttag--gttggtgcaaaagtaggttgtgattttaccattgaaagtaatatcaaaaacctcaattactCCtaagacagtagattt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124787 119 - 72318688 atatattaatagcatagtgcttatagctaataatactgttag--gttggtgcaaaagta-attgtgattttaccattgaaagtaatatcaaaaacctcaattactCCtaagacagtagattt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460743 120 - 1517660 atatattaatagcatggtgcttatagctaataatactAttag--gttggtgcaaaagtaggttgtgattttaccattgaaagtaatatcaaaaacctccattactCCtaagacagtagattt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556522 119 + 6513552 atatattgatagcatagtgcttatagctaataatactgttag--gttggtgcaaaagta-attgtgattttacagttgaaagtaatatcaaaaaccccaattactCCtaagacagtagattt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337361 121 + 117903854 atatattaatggcatagttctcatagctaataatactatTAATTgtaggtgcaaaagta-attgcgattttaccattgaaagtaatgtcaaaaaccgcaattacttCAaagacaatagattt i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19514618 119 - 31320352 atattttaatggcatagtgcttattgctaataatactattag--gttggtgcaaaagca-attgtgattttaccattgaaagtaatgtcaaaagccacaattacttctaagatgatagattt i saiBol1.JH378121 I 1 C 0 s cebCap1.NW_016107689v1 1716912 115 + 2203405 ATATATTAATGGCAGAGTGCTTATTGC---TAATACTAttag--gttggtgcaaaagca-attgcgattttacca-tgaaagtaatgtcaaaaaccacaattacttCtaagatgatagattt i cebCap1.NW_016107689v1 I 13 C 0 s aotNan1.NW_018502140v1 3664462 119 - 14941987 atatattaatggcatagtgctcatagctaataatactgttag--gttggtgcaaaagta-attgcgattttactattgaaagtaatgtcaaaaaccacaattactCCTAGGACGATAGATTT i aotNan1.NW_018502140v1 I 2 I 223 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 546220 0 - 2150887 C e canFam3.chr1 112365584 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=1791592.000000 s hg38.chr18_GL383571v1_alt 193993 187 + 198278 tatgttaaatattcttatcacaaactaataataataaggatgggaggaaatttttggaggtgacggaactgtctgtgaatttcatggtagcaatactttcatggatgtgtatatgtgcttatcccctaacttgtcaagttgcagacattaaatatgtacagtgtcttacatgataatcatGAGATTA s panTro5.chr18 65103675 187 + 78221452 tatgttaaatattcttatcacaaactaataataataaggataggaggaaatttttggaggtgacggaactgtctgtgaatttcatggtagcaatactttcatgggtgtatatatgtgcttatcccctaacttgtcaagttgcagacattaaatatgtacagtgtcttacatgataatcatGAGATTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222661 187 + 77229886 tatgttaaatattcttatcacaaactaataataataaggataggaggaaatttttggaggtgacggaactgtctgtgaatttcatggtagcaatactttcatgggtgtatatatgtgcttatcccctaacttgtcaagttgcagacattaaatatgtacagtgtcttacatgataatcatGAGATTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442145 187 + 17472758 tatgttaaatattcttatcacaaactaataataataaggatgggaggaaatttttggaggtgacggaactgtctgtgaatttcatggtagcaatactttcatgggtgtgtatatgtgcttatcccctaacttgtcaagttgcagacattaaatatgtacagtgtcttacatgataatcatGAGATTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483794 187 - 152096393 tatgttaaatattcttatcacaaactaataataataaggatgggaggaaatttttggaggtgacggaactgtctgtgaatttgatggtagcaatactttcatgggtgtgtatacctgcttatcctctaacttgtcaagttgcacacattaaatatgtacagtgtcttacatgataatcatGAGATTA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433168 187 + 70235451 tatgttaaatattcttatcacaaactaataatagtaaggatgggaggaaacttttggaggtgatggaagtgtctgtgaatttgacggtagcaatactttcatgggtgtgtatatgtgcttatcccctaacttgtcaagttgcagatattaaatatgtacagtgtcttacaaggcaatcatGAGATTA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124480 187 - 75711847 tatgttaaatattcttatcacaaactaataatagtaaggatgggaggaaacttttggaggtgatggaagtgtctgtgaatttgacggtagcaatactttcatgggtgtgtatatgtgcttatcccctaacttgtcaagttgcagatattaaatatgtacagtgtcttacaaggcaatcatGAGATTA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13683868 187 - 18804593 tatgttaaatattcttatcacaaactaataatagtaaggatgggaggaaacttttggaggtgatggaagtgtctgtgaatttgacggtagcaatactttcatgggtgtgtatatgtgcttatcccctaacttgtcaagttgcagatattaaatatgtacagtgtcttacaaggcaatcataAGATTA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295608 171 + 18905526 tatgttaaatattcttatcacaaactaataataataaggatgggaggaaatttttggaggtgatggaagtgtctgtgaatttgacggta----------------tgtgtatatgtgcttatcccctaacgtgtcaagttgcagatattaaatatgtacagtgtcttatatggcaatcatGAGATTA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60124906 187 - 72318688 tatgttaaatattcttatcacaaactaataataacaaggatgggaggaaatttttggaggtgatggaagtgtctgtgaatttgacggtagcaatacttccatgggtgtgtatatgtgcttatcccctaacttgtcaagttgcagatattaaatatgtacagtgtcttacatgataatcatGAGATTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 460863 171 - 1517660 tatgttaaatattcttatcacaaactaataataataaggatgggaggaaatttttggaggtgatggaagtgtctgtgaatttgacggta----------------tgtgtatatgtgcttatcccctaacgtgtcaagttgcagatattaaatatgtacagtgtcttacatggcaatcatGAGATTA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556641 187 + 6513552 tatgttaaatattcttatcacaaactaataataataaggatgggaggaaacttttggaggtgatggaagtgtctgtgaatttgacggtagcaatactttcacgggtgtgtatatgtgcttatcccctaacttgtcaagttgtagatattaaatatgtacagtgtcttacatggcaatCGTGAGATTA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337482 182 + 117903854 tatgttaagtattcttatcacaaactactaataatac-gatgggaggaaacttttggaggtgatggaaatgtctgtgaatttgatggtggcagta----catgtgtgtgtacatgtccttatcccctaacttgtcaagttgcatacattaaatatgtacagtATCCTACATGGTAATCACGAGGTTA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19514737 185 - 31320352 tatgttaagtattcttatcacaaactaataacaataaggatgggaggaaacttttggaggtgatggaaatgtctgtgaatttgttggtagaagtagtttcatgggtgtgtatatgtgcttatcccctaacttgtcaagttgcatgc--taaatacatacagtgttctACGTGGTAATCACGAGATTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1717027 187 + 2203405 tatgttaagtattcttatcgcaaactaataataataaggatgggaggaaacttttggaggtgatggaaatgtctgtgaatttgatgatggcagtagtttcatgggtgtgtatatgtgtttatcccctaacttgtcaagttgcatacattaaatatgtacagtGTCCTACATGGTAATCACGAGATTA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3664804 186 - 14941987 Tatgttaagtattcttatcacaaactaataataataa-gatgggaggaaacttttggaggtgatggaaatgtctgtgaatttgatggtggcagtagtttcatgggtgtgtacatgtgcttatcccctaacttgtcaagttgcatacgttaaatatgtacagtGTCCTACATGGTAATCACGAAATTA i aotNan1.NW_018502140v1 I 223 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 546220 0 - 2150887 C e canFam3.chr1 112365584 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=147402.000000 s hg38.chr18_GL383571v1_alt 194180 14 + 198278 ACATGAGATATGAA s panTro5.chr18 65103862 14 + 78221452 ACATGAGATATGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222848 14 + 77229886 ACATGAGATATGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442332 14 + 17472758 ACATGAGATATGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483981 14 - 152096393 ACATGAGATATGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433355 14 + 70235451 ACATGAGATATGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124667 14 - 75711847 ACATGAGATATGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684055 14 - 18804593 ACATGAGATATGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295779 14 + 18905526 ACATGAGATATGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125093 14 - 72318688 ACATGAGATATGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461034 14 - 1517660 ACATGAGATATGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556828 14 + 6513552 ACATGAGCTATGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337664 14 + 117903854 ACGTGAGATATGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19514922 14 - 31320352 ACGTGAGATATGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1717214 14 + 2203405 ACATGAGATATGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3664990 14 - 14941987 ACGTGAGATACGAA i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 546220 13 - 2150887 acatgtgagaaaa- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112365584 0 - 122678785 C e otoGar3.GL873546 11280766 1351 - 20685099 I a score=934951.000000 s hg38.chr18_GL383571v1_alt 194194 92 + 198278 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACAAAAAAGACTACAGT-ACAATAagtcctggctttcctatcaaagaactgcat s panTro5.chr18 65103876 92 + 78221452 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACAAAAAAGACTACAGT-ACAATAagtcctggctttcctatcaaagaactgcat i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222862 92 + 77229886 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACAAAAAAGACTACAGT-ACAATAagtcctggctttcctatcaaagaactgcat i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442346 92 + 17472758 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACAAAAAAGACTACAGT-ACAGTAagtcctggctttcctatcaaagaactgcat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139483995 87 - 152096393 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACAAAGAAGAC-----T-ACAAAAagtcctggctttcctatcaatgaactgcat i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433369 92 + 70235451 AGACCATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACGAAAAAGACTGCAGT-ACCAAAagtcctggctttcctatcaatgaactgcat i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124681 92 - 75711847 AGACCATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACGAAAAAGACTGCAGT-ACCAAAagtcctggctttcctatcaatgaactgcat i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684069 92 - 18804593 AGACCATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACGAAAAAGACTGCAGT-ACCAAAagtcctggctttcctatcaatgaactgcat i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295793 92 + 18905526 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACGAAAAAGACTGCAGT-ACCAAAagtcctggctttcctatcaatgaactgcat i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125107 92 - 72318688 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACGAAAAAGACTGCAGT-ACCAAAagtcctggctttcctatcaatggactgcat i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461048 92 - 1517660 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGACGAAAAAGACTGCAGT-ACCAAAagtcctggctttcctatcaatgaactgcat i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556842 92 + 6513552 AGAACATGAGATATGACATTTCTTCTGACCAAAT-------GAAAGATGAAAAAGACTGCAGT-ACAAAAagtcctggctttcgtatcaatgaactgcat i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337678 92 + 117903854 AGGACATGAGATATGGCATTTCTTCTGACCAAAT-------GAAAGATGAAAGAGATTACAGT-ACAAAAAGTCCTGGCTTTCCTAGCAATGAACTGTAT i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19514936 93 - 31320352 AGAACATGAGATATGGCATTTCTTCTGACCAAAT-------GAAAGATGAAAGAGATTGCAGTAAAAAAAAGTCCTGGCTTTCCTAGCAATGAACTGTAT i saiBol1.JH378121 C 0 I 2 s cebCap1.NW_016107689v1 1717228 92 + 2203405 AGAACATGAGATATGGCATTTCTTCTGACCAAAT-------GAAAGATGAAAGAGATTAAGGT-ACAAAAAGCCCTGGCTTTCCTAGCAATGAACTGTAT i cebCap1.NW_016107689v1 C 0 I 9 s aotNan1.NW_018502140v1 3665004 92 - 14941987 AGAACATGAGATATGGCATTTCTTCTGACCAAAT-------GAAAGATGAAAGAGATTACAGT-ACAAAAAGTCCTGGCTTTCCTAGCAATGAACTGTAT i aotNan1.NW_018502140v1 C 0 I 2 s canFam3.chr1 112365584 93 - 122678785 AGAACATGAGATA--ACATTTCTTCTGACTGCATTCTATCCTGAATACAAAAGGGA-TACTGA-ATATGAAATCTTGATTTTCct---agtgaactgtat i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 546233 33 - 2150887 gggatatgagatatgacatttcttctgaccaat------------------------------------------------------------------- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=69547.000000 s hg38.chr18_GL383571v1_alt 194286 9 + 198278 catttttgc s panTro5.chr18 65103968 9 + 78221452 catttttgc i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222954 9 + 77229886 catttttgc i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442438 9 + 17472758 catttttgc i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484082 9 - 152096393 catttttgc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433461 9 + 70235451 catttttgc i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63124773 9 - 75711847 catttttgc i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684161 9 - 18804593 catttttgc i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13295885 9 + 18905526 catttttgc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125199 9 - 72318688 catttttgc i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461140 9 - 1517660 catttttgc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3556934 9 + 6513552 catttttgc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105337772 8 + 117903854 GA-TTTTGA i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19515031 7 - 31320352 GA--TTTGA i saiBol1.JH378121 I 2 C 0 s aotNan1.NW_018502140v1 3665098 9 - 14941987 GATTTTTGA i aotNan1.NW_018502140v1 I 2 C 0 s canFam3.chr1 112365678 9 - 122678785 aatttttgg i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 546266 9 - 2150887 cattcttga i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I e cebCap1.NW_016107689v1 1717320 9 + 2203405 I a score=1213872.000000 s hg38.chr18_GL383571v1_alt 194295 111 + 198278 caagtcatgtgctacacatgccctt-gattggcttccccttct--gagaagtgaagcatttcggccgt-atgatctcaaaatccctttcTGATTTATGGAATTATATTAATTAAT s panTro5.chr18 65103977 111 + 78221452 caagtcatgtgctacacatgccctt-gattagcttccccttct--gagaagtgaagcatttcggccgt-atgatctcaaaatccctttcTGATTTATGGAATTATATTAATTAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64222963 111 + 77229886 caagtcatgtgctacacatgccctt-gattagcttcctcttct--gagaagtgaagcatttcggccgt-atgatctcaaaatccctttcTGATTTATGGAATTATATTAATTAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442447 113 + 17472758 caagtcatgtgctacacatgccctt-gattagcttccccttctgagagaagtgaagcatttcggccgt-atgatctcaaaatccctttcTGATTTATGGAATTATATTAATTAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484091 111 - 152096393 caagtcatatgctacacatgccctt-gattagcttccccttct--gagaagtgaagcatttgggccgt-atgatctcaaaatccctttcTGATTTATGGAATTATATTAATTAAT i nomLeu3.chr4 C 0 I 330 s rheMac8.chr18 57433470 111 + 70235451 caagtcatatgctacacatgccctt-aattagcttccccttct--gagaagtgaagattttgggccat-atgatctcaaaatccctttctgatttatagaattatattattTAAT i rheMac8.chr18 C 0 I 2 s macFas5.chr18 63124782 111 - 75711847 caagtcatatgctacacatgccctt-aattagcttccccttct--gagaagtgaagattttgggccat-atgatctcaaaatccctttctgatttatagaattatattatttaat i macFas5.chr18 C 0 I 2 s macNem1.NW_012016688v1 13684170 111 - 18804593 caagtcatatgctacacatgccctt-aattagcttccccttct--gagaagtgaagaatttgggccat-atgatctcaaaatccctttctgatttatagaattatattattTAAT i macNem1.NW_012016688v1 C 0 I 2 s cerAty1.NW_012001075v1 13295894 111 + 18905526 caagtcatatgctacacatgccctt-aattagcttccccgtct--gagaagtgaagaatttgggccat-atgatctcaaaatccctttctgatttttggaattatattatttaat i cerAty1.NW_012001075v1 C 0 I 2 s chlSab2.chr18 60125208 111 - 72318688 caagtcatatgctacacatgccctt-aattagcttccccttct--gagaagtgaagaatttgggccat-atgatctcaaaatccctttcTGATTTATGGAATGATATTATTTAAT i chlSab2.chr18 C 0 I 2 s manLeu1.NW_012106698v1 461149 111 - 1517660 caagtcatatgctacacatgccctt-aattagcttccccttct--gagaagtgaagaatttgggccat-atgatctcaaaatccctttctgatttatggaattatattatttaat i manLeu1.NW_012106698v1 C 0 I 2 s colAng1.NW_012115433v1 3556943 111 + 6513552 catgtcatatgctacacatgccctt-aattagcttccccttct--gagaagtgaagaatttggaccat-atgatctcaaaatccctttctgatttatggaattatattatttaat i colAng1.NW_012115433v1 C 0 I 2 s calJac3.chr13 105337780 107 + 117903854 CAAGGCATATGCTACCCATGCCCTTAAATTAGCTTCTCCTTCT--GAGAAGTGAAGCATTTGGGTCAT-ATAATATCAAAATCCCTT--TGATATACGGAATTATATTAAT---T i calJac3.chr13 C 0 I 2 s saiBol1.JH378121 19515038 112 - 31320352 CAAGGCATATGCTACTCATGCCCTT-AATTAGATTCTCCTTCT--GAGAAGTGAAGCCTTTGGATCATAATAATATCAAAATCCCTTTCTGATATATGGaattatattaattaat i saiBol1.JH378121 C 0 I 2 s cebCap1.NW_016107689v1 1717329 108 + 2203405 CAAGGCATATGCTACGCATGCCCTT-AATT---TTTTCCTTCT--GAGAAGTGAAGCATTTGGGTCAT-ATAATATCAAAATCCCTTTCTGATATGTGGAATTATATTAATTAAT i cebCap1.NW_016107689v1 I 9 I 2 s aotNan1.NW_018502140v1 3665107 111 - 14941987 CAAGGCATATGCTACACATGCCCTT-AATTAGCTTCTCCTTCT--GAGAAGTGAAGCATTTGGGTCAT-ATAATGTCAAAATCCCTTTCTGATATATGGAATTATATTAATTAAT i aotNan1.NW_018502140v1 C 0 I 2 s canFam3.chr1 112365687 107 - 122678785 taagtcatatatttcacaggatctt-----agattcctcttct--gagaagtgaaccatttgggtcat-ctgattccaaagtccctttcagctTCACAGAATTATATTTATTAGT i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 546275 107 - 2150887 caaatcgtgcacttcacaagccttc-----agacttcccctcc--gagaagttaagcatttgggccat-ctgatctcaaaattcctctcagctttatggaattctatTGAGTAGT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=2284302.000000 s hg38.chr18_GL383571v1_alt 194406 219 + 198278 --TATATATATATTTATCCATAGTTATTTGGATTTA-CTTTTCAACATACAAAGGTGTAATTTAATTCTTATATTTGTTTTATAATCTTTAAAACCTAATTTTTGTTATTTGAGATTGTAAAAATTAAGTTTACATTATGTAGCTGAGAAGTAGGTAAC-TATCTATTCTGTATTACTGTGAGTTA-GCCTGAATTTCAAGTAA--AAGCATCTTCATTTTTCTTA s panTro5.chr18 65104088 219 + 78221452 --TATATATATATTTATCCATAGTTATTTGGATTTA-CTTTTCAACATACAAAGGTGTAATTTAATTCTTATATTTGTTTTATAATCTTTAAAACCTAATTTTTGTTATTTGAGATTGTAAAAATTAAGTTTACATTATGTAGCTGAGAAGTAGGTAAC-TATCTATTCTGTATTACTGTGACTTA-GCCTGAATTTCAAGTTA--AAGCATCTTCATTTTTCTTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223074 219 + 77229886 --TATATATATATTTATCCATAGTTATTTGGATTTA-CTTTTCAACATACAAAGGTGTAATTTAATTCTTATATTTGTTTTATAATCTTTAAAACCTAATTTTTGTTATTTGAGATTGTAAAAATTAAGTTTACATTATGTAGCTGAGAAGTAGGTAAC-TATCTATTCTGTATTACTGTGAGTTA-GCCTGAATTTCAAGTAA--AAGCATCTTCATTTTTCTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442560 215 + 17472758 --TATATATATATTTATCCATAGTTATTTGGATTTA-CTTTTCAACATACAAAGGTGTAATTTAATTCTTATATTTGTTTTATAATCTTTAAAACCTAATTTTTG----TTGAGATTGTAAAAATTAAGTTTACATTATGTAGCTGAGAAGTAGGTAAC-TATCTATTCTGTATTACTGTGAGTTA-GCCTGAATTTCAAGTAA--AAGCATCTTCATTTTTCTTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484532 219 - 152096393 --taTATATACATTTATCCTTAGTTATTTGGATTTA-CTTTTTAGCATGTGAAGGTGTAATTTAATTCTTGTATTTGTTTTATAATCTTTAAAACCTAATTTTTGTTATTTGAGGTTGTAAAAATTAAATTTACATGATGTAGCTGAGAAGTAGGTAAC-CATCTATTCGGTATTACTGTGAGTTA-GCCTGAATTTCAAGTAA--AAACATCTTCATTTTTCTTA i nomLeu3.chr4 I 330 C 0 s rheMac8.chr18 57433583 219 + 70235451 --TATACATGCATTTCTCCATAGTTGTTTTGATTTA-CTTTTTAGCATACAAAGGTGTAATTTAATTCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGTAGGTAAC-CATCTATTCTGTATGACTCCGAGTTA-GCCTGAATTTCAAGTAA--AAATATCCTCAGTTTTCTTA i rheMac8.chr18 I 2 C 0 s macFas5.chr18 63124895 219 - 75711847 --tATACATGCATTTCTCCATAGTTGTTTTGATTTA-CTTTTTAGCATACAAAGGTGTAATTTAATTCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGTAGGTAAC-CATCTATTCTGTATGACTCCGAGTTA-GCCTGAATTTCAAGTAA--AAATATCCTCAGTTTTCTTA i macFas5.chr18 I 2 C 0 s macNem1.NW_012016688v1 13684283 219 - 18804593 --TATACATGCATTTCTCCATAGTTGTTTTGATTTA-CTTTTTAGCATACAAAGGTGTAATTTAATTCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGTATGTAAC-CATCTATTCTGTATGACTCCGAGTTA-GCCTGAATTTCAAGTAA--AAACATCCTCAGTTTTCTTA i macNem1.NW_012016688v1 I 2 C 0 s cerAty1.NW_012001075v1 13296007 219 + 18905526 --tATACATGCATTTCTCCATAGTTGTTTTGATTTA-CTTTTTAGCATACAAAGGTGTAATTTAAATCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGTAGGTAAC-CATCTATTCTGTATTACTCCGAGTTA-GCCTGAATTTCAAGTAA--AAACATCCTCAGTTTTCTTA i cerAty1.NW_012001075v1 I 2 C 0 s chlSab2.chr18 60125321 218 - 72318688 --TATACATACATTTCT-CATAGTTGTTTTGATTTA-CTTTTTAGCATATGAAGGTGTAATTTAATTCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGTAGGTAAC-CATCTATTCTGTATTACTCCGAGTTA-GCCTGAATTTCAAGTAA--AAACATCCTCAGTTTTCTTA i chlSab2.chr18 I 2 C 0 s manLeu1.NW_012106698v1 461262 219 - 1517660 --tATACATGCATTTCTCCATAGTTGTTTTGATTTA-CTTTTTAGCATACAAAGGTGTAATTTAATTCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGTAGGTAAC-CATCTATTCTGTATTACTCCGAGTTA-GCCTGAATTTCAAGTAA--AAACATCCTCAGTTTTCTTA i manLeu1.NW_012106698v1 I 2 C 0 s colAng1.NW_012115433v1 3557056 219 + 6513552 --tATACATACATTTCTCCATAGTTGTTTTGATTTA-CTTTTTAGCATACGAAGGTGTAATTTAATTCTTATAATTGTTTTATAATCTTTAACACCTAATTTTTGTGATTTGAGATTTTAAAAATTAAATTTACATGATGTAGCTCAGAAGGAGGTAAC-CATCTATTCTGTATTATTCCGAGTTA-GCCTGAATTTCAAGTAA--AAACATCCTCAGTTTTCTTA i colAng1.NW_012115433v1 I 2 C 0 s calJac3.chr13 105337889 216 + 117903854 --TATACACACATGGCTCTATAGTTATCTGGATATATTTTTTTAGCATATGTAGGTATAAAT----TCTTATGTTTTCTTTATAATCTTTAAAACCTAATTTTTGTTATTTGAGATTTTAAAAATTAAATTTACATAATGTAGTTCAGAAGTAGGTAAC-CATCTATTCTGTATAACTCTGAGTTA-GCCTAAATTTCTGGTAA--AAGGATCCTCATTTTTCTTA i calJac3.chr13 I 2 C 0 s saiBol1.JH378121 19515152 215 - 31320352 --tataCACACATTTCTCTACAGTTATTTGGATTTA-CTTTTTAGCATATGAAGGTATAATT----TCTTATATTTGTTTTATAATCTTTAAAACCCAATTTTTGTTATTTGAGATTTTTTAAATCAAATTTACATGATGTAGCTCAGAAGTAGGTAAC-CATTTAGTCTGTATTACTCTGAGTCA-GCCTAAATTTCTAGTAA--AAGCATCCCCATTTTTCTTA i saiBol1.JH378121 I 2 C 0 s cebCap1.NW_016107689v1 1717439 215 + 2203405 --TATACACACATTTCTCTACAGTTATTTGGATTTA-CTGTTTAGCATATGAAGGTATAATT----TCTTATATTTGTTTTATAATCTTTAAAACCTAGTTTTTGTTATTTGAGATTTTAAAAATCAAATTTACATGGTGTAGCTCAGAGGTAGGTAAC-CATCTATTCTCTATTACTCTGAGTTA-GCCTTAATTTCTAGTAA--AAGGATCCTCATTTTTCTTA i cebCap1.NW_016107689v1 I 2 C 0 s aotNan1.NW_018502140v1 3665220 212 - 14941987 --TATACACACATTGCTCTATAGTTATTTGGATATA-CTTTTTAGCATATGAAGGTATAATT----TCTTATATTTGTTTTATAATCTTTAAAACCTAATTTTTG---TTTGAGATTTTAAAAATTAAATTTACATAATGTAGCTCAGAAGTAGGTAAC-TATCTATTCTGTATTACTCTGAGTTA-GCCTAAATTTCTGGTAA--AACGATCCTCATTTTTCTTA i aotNan1.NW_018502140v1 I 2 C 0 s canFam3.chr1 112365796 207 - 122678785 --TAAATATATATTTCTCTATAGTTACTTGAATTTG-CTTCTTAGAATACGAAGGTATAATTTAATTCTTATGTTTGTTTTGTATTCTTTAAAACCTGATTTTTG----------TTTTACA----AAATTTATATAATGTAACTCAGACATGATATTT-CATCTATTCTGTGTTTTTTGGAGCTA-GCCTAAATAAAAAAAAAAGAAGAGTCTTCATTTTTCCTA i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 546382 215 - 2150887 TATAAAGATAAATTTTTCCACAGTTGCTTCAATTTA-CTTCTTGGACTATAAAAGCACAATTTAATTCTTATCGTTATTTTGTATTCTTTAAAACCTGATTTTTGTTATT-----TTGTTAAAATCAAATTT-TATAATGTAGCTTAGAAGTGGGTAACGCATCTATTCTGTGTTGTTTTGAGCAAGGCCTGGGTTTAAAAAAA--AAGACTCCTCATTTTCCT-- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41564803 337 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=118202.000000 s hg38.chr18_GL383571v1_alt 194625 9 + 198278 CTTTTTATA s panTro5.chr18 65104307 9 + 78221452 CTTTTTATA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223293 9 + 77229886 CTTTTTATA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442775 9 + 17472758 CTTCTTATA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484751 9 - 152096393 CTTTTTATA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433802 9 + 70235451 CTTTTTATA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125114 9 - 75711847 CTTTTTATA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684502 9 - 18804593 CTTTTTATA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296226 9 + 18905526 CTTTTTATA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125539 9 - 72318688 CTTTTTATA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461481 9 - 1517660 CTTTTTATA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557275 9 + 6513552 CTTTTTATA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338105 9 + 117903854 CTTTTTATA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515367 9 - 31320352 CTTTTTCTA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1717654 9 + 2203405 CTTTTTATA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665432 8 - 14941987 C-TTTTATA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41565140 9 + 83067054 CTTTTTATA i micMur3.chr19 I 337 C 0 s canFam3.chr1 112366003 9 - 122678785 CTCTTTATA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 546597 9 - 2150887 ACTTTTATA i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11280766 1351 - 20685099 I a score=545515.000000 s hg38.chr18_GL383571v1_alt 194634 41 + 198278 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT s panTro5.chr18 65104316 41 + 78221452 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223302 41 + 77229886 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442784 41 + 17472758 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484760 41 - 152096393 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATTATCTTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433811 41 + 70235451 TACAGCAATATC-----ATAATAGGGTCATTTTGTAATGATCTTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125123 41 - 75711847 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684511 41 - 18804593 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296235 41 + 18905526 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125548 41 - 72318688 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGGTCTTTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461490 41 - 1517660 TACAGCAATATC-----ATCATAGGGTCATTTTGTAATGATCTTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557284 41 + 6513552 TACAGCAATATC-----ATTATAGGGTCATTTTGTAATGAGCTTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338114 41 + 117903854 TGCAACGTTATC-----ATTACAGGGTAATTTTGTAATGATCTTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515376 41 - 31320352 TGCAGTGTTAAT-----ATCACAGGGTCATTTTCTAATGATCTTTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1717663 41 + 2203405 TGCAGTGTTATT-----ATCACAGGGTCATTTTGTAATGATCTTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665440 41 - 14941987 TGCAGCGTTATC-----ATTACAGGGTCATTTTGTAATGATCTTTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41565149 41 + 83067054 TACAGCAATATC-----ACCATATGGTCATTTTGTAATGATTTTTT i micMur3.chr19 C 0 I 122 s otoGar3.GL873546 11282117 46 - 20685099 TGCAGCAATACCATAAAATAATATGGTCATTTTATAATGATTTTTT i otoGar3.GL873546 I 1351 I 1 s canFam3.chr1 112366012 41 - 122678785 TAGAGTAAGGCC-----ATCATATGGTTATTTGTTAATGATCTCCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 546606 40 - 2150887 TAGGGCAAGATC-----ACCATATGATCATTTCATAATAATTTTT- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=1219450.000000 s hg38.chr18_GL383571v1_alt 194675 117 + 198278 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TATTCCTTCTGCAAGTATTATCAGTGTAAACCACTGA----CAGTCTG------------------ s panTro5.chr18 65104357 117 + 78221452 CGGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TATTCCTTCTGCAAGTATTATCAGTGTAAACCACTGA----CAGTCTG------------------ i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223343 117 + 77229886 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TATTCCTTCTGCAAGTATTATCAGTGTAAACCACTGA----CAGTCTG------------------ i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442825 117 + 17472758 CAGTTTTCTAGTGCGGTGAAATGATTAGAAATAGAATGAAATTGGTTGGTCATTGCTCACACATTCAAGTAGC-TATTCCTTCTGCAAGTATTATCAGTGTAACCCACTGA----CAGTCTG------------------ i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484801 117 - 152096393 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTAGCTCGTCATTGCTCACACATTCAAGTAGC-TATTCCTTCTGCAAATATTATCAATGTAAACCACTGA----CAGTCTG------------------ i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433852 121 + 70235451 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTACTATAAATGTAAACCACTGACACTCAGTCTT------------------ i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125164 121 - 75711847 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTACTATAAATGTAAACCACTGACACTCAGTCTT------------------ i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684552 121 - 18804593 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTACTATAAATGTAAACCACTGACACTCAGTCTT------------------ i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296276 121 + 18905526 CAGTTTTCTAGTGTGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTACTATAAATGTAAACCACTGACACTCAGTCTT------------------ i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125589 121 - 72318688 CAGTTTTCTAGTGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTATTATAAATGTAAACCACTGACAGTCAGTCTT------------------ i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461531 121 - 1517660 CAGTTTTCTAGTGTGGTGAAATAATTAGAAATAGAATGAAATTGGCTGGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTACTATAAATGTAAACCACTGACACTCAGTCTT------------------ i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557325 117 + 6513552 CAGTTTTCCAATGCGGTGAAATAATTAGAAATAGAATGAAATTGGCTAGTCATTGCTCACACATTCAAGTAGC-TCTTCCTTCTGCAAGTATTATAAATGTAAACCACTGA----CAGTCTT------------------ i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338155 121 + 117903854 CAGGTTTCTAGTTCGCGGAGATAATTAGAAACAGAATAAAAGTTGCTGGTCGTCGCTCACACATTCAAGTCGC-CATTCCTTCTGCAAGTATTTTAAATGTAAACCACTAACAGTCACTCCG------------------ i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515417 121 - 31320352 CAGGTTTCTAGTTCGGGGAAATAATTAGAAATAGAATAAAATTTGCTGGTCGTTGCTCACACATTCCAGTCGC-TATTCCTTCTGCAAGTATTTTAAATGTAAACTGCTAATACTCACTCTG------------------ i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1717704 121 + 2203405 CAGGTTTCTAGTTCAGGGAAATAATTAGAAACAGAATAAAATTTGCTGGTCGTTGCTCACACATTCAAGTCAC-TATTCCTTCTGCAAGTATTTTAAATCTAAACTGCTAACACTCACTCTG------------------ i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665481 121 - 14941987 CAGGTTTCTAGTTCGCGGAAATAATTAGAAATAGAATAAAATTTGCTGGTCGTTGCTCACACATTCAAGTCGC-CATTCCTTCTGCAAGTATTTTAAATGTAAACCGCTAACATTCACTCTG------------------ i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11282164 111 - 20685099 TTGGTTTCTTACACAGTGAAATCACTAG-ATTATGATAAAATTTGCTGGGTTTTATTCACACAGT-AGGTAGT-TATTCTTTCTGCAAGTGTTTTGAAC----ACCCCCCC----CATCCTT------------------ i otoGar3.GL873546 I 1 C 0 s canFam3.chr1 112366053 118 - 122678785 TAAGTTTCTTACATAATGAAATCAATAGAAATATGATAA---TTTCTGTTCTGTCCTCAGAAA-TCAAGTAGCATATTCCTTGAGCACATTTTTTAAGAGTAACTCTACAATATTTACCCTG------------------ i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 546646 139 - 2150887 CAGGTTTCTTGCACAGTGAAATTACTAGAACAATGATGAAGTCTACTGTTCTTTTCTCCTGCATTAACATAGC-TATTTCATCTGCACGGGTTTTATGTGTAACCCTCTTACCACCACCCCCACCCCAAATCTCACTTGG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41565190 122 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=4000057.000000 s hg38.chr18_GL383571v1_alt 194792 303 + 198278 CTTTAGAGTT-GGGGGACAGCCTTACTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTATTGTCCCAGAGAATCTTCCCTTTAGTATACACCTTTATCTACAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTCCT--CCTCTCTC-TCTAGTAAGAAA---TTCCAGTGAGTTTgttaagaacctgaattc--agtctacctctgccact-----gctagctatgtgcacttgg s panTro5.chr18 65104474 303 + 78221452 CTTTAGAGTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTATTGTCCCAGAGAATCTTCCCTTTAGTATACACCTTTATCTACAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTCCT--CCTCTCTC-TCTAGTAAGAAA---TTCCAGTGAGTTTgttaagaaactgaattc--agtctacctccgccact-----gctagctatgtgcacttgg i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223460 303 + 77229886 CTTTAGAGTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTATTGTCCCAGAGAATCTTCCCTTTAGTATACACCTTTATCTACAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTCCT--CCTCTCTC-TCTAGTAAGAAA---TTCCAGTGAGTTTgttaagaaactgaattc--agtctacctccgccact-----gctagctatgtgcacttgg i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5442942 301 + 17472758 CTTTAGAGTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAG--ACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTATTGTCCCAGAGAATCTTCCCTTCAGTATACGCCTTTATCTACAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTCCT--CCTCTCTC-TCTAGTAAGAAA---TTCCAGTGAGTTTgttaagaacctgaattc--agtctacctccgccact-----gctagctatgtgcacttgg i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139484918 300 - 152096393 CTTTAGAGTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAATATTTCAACTTCCTGTCTAACTTCTTTTAAAACATGATTTGCATCTGTCCC-TATCTTTATGCCATCCTTTCTTGTCCCAGAGAATC-TCCCTTCAGTTTACACCTTTATCTACCATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCACTTTTCT--CCTCTCTC-TC--GTGAGAAA---TTCCAGTGAGTTTgttaagaacctgaattt--agtctacctccgccact-----gctagctttgtgcacttgg i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57433973 303 + 70235451 TTTTAGAGTT-GAGGGACAGCCTTGCTTTCTTC------GGGGAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTTATCAATTTTCT--CCTCTCTC-TCTAGTGAGAAA---TTCCAGTGAATGTgttaagaacctgaattt--agtctacctccgccact-----gctagctatgtgtacttgg i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125285 303 - 75711847 TTTTAGAGTT-GAGGGACAGCCTTGCTTTCTTC------GGGGAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--CCTCTCTC-TCTAGTGAGAAA---TTCCAGTGAGTGTGTTAAGAACCTGAATTT--AGTCTACCTCCGCCACT-----GCTAGCTATGTGTACTTGG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684673 302 - 18804593 TTTTAGAGTT-GAGGGACAGCCTTGC-TTCTTC------GGGGAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--CCTCTCTC-TCTAGTGAGAAA---TTCCAGTGAGTGTgttaagaacctgaattt--agtctacctccgccact-----gctagctatgtgtacttgg i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296397 303 + 18905526 TTTTAGAGTT-GAGGGACAGCCTTGCTTTCTTC------GGGGAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--CCTCTCTC-TCTAGTGAGAAA---TTCCAGTGAGTGTgttaagaacctgaattt--agtctacctccgccact-----gctagctatgtgtacttgg i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60125710 303 - 72318688 TTTTAGAGTT-GAGGGACAGCCTTGCTTTCTTC------AGGGAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--CCTCTCTC-TCTAGTGAGAAA---TTCCAGTGAGTTTgttaagaacctgaattt--agtctacctccgccact-----gctagctatgtgtacttgg i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461652 303 - 1517660 TTTTAGAGTT-GAGGGATAGCTTTGCTTTCTTC------GGGGAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACACGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--CCTCTCTC-TCTAGTGAGAAA---TTCCAGTGAGTGTgttaagaacctgaattt--agtctacctccgccact-----gctagctatgtgtacttgg i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557442 303 + 6513552 TTTTAGAGTT-GAGGGACAGCCTTGCTTTCTTC------AGGGAAATTGCAGCTCGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATGATCTGCATCTGTCCC-TATCTTTATGCCATCTCTTCTTGTCCCAGAGAATCTTCCCTTCAGTATACACCTATATCTGCAATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--CCTCTCTC-TCTCGTGAGAAA---TTCCAGTGAGTTTgttaagaacctgaattg--agtctacctccgccact-----gctagctatgggtacttgg i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338276 303 + 117903854 CTGTAGACTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAGAGTATTTTAACTTCCTGTCTAACTTCGTTTAAAACACTGTCTGCATCGGTCCC-TATCTTTGTGCCATCTCTTCTTGTCCCAGAGAATCTTCCTTTCGGTATACACCTTTATCTGAGATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--TCTCTCTC-TCTAGTGAGAAA---TTCCAGTTAGTTTGTTgagaacctagattt--agtctagtttcaccact-----gctagctatgtgaacttgg i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515538 303 - 31320352 CTGTAGACTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTATCTAACTTCGTTTAAAACATTATCTGCATCTGTCTC-TATCTTTGTGCCATCTCTTCTTGTCCCAGAGAATCTTCTTTTCAGTGTACACTTTTATCTGAGATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAATTTTCT--TCTCTCTC-TCCAGTGAGAAA---TTCCAGTTAGTTTgttaagaacctggattt--agtctagctccatcact-----gctagctctgtgaacttgg i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1717825 303 + 2203405 CTACAGACTT-GGGGGACAGCCTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTCTTAAAACATTATCTGCATCTGTCCC-TATCTTTGTGCTATCTCTTCTTGTCCCAGAGAATCTTCTTTTCAGTATACACCTTTATCTGAGATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCGATTTTCT--TCTCTCTC-TCTAGTGAGAAA---TTCCAGTTAGTTTgttaagaacctgtattt--agtctagctccaccact-----gctagctatgtaaacttgg i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665602 305 - 14941987 CTGTAGACTT-GAGGGACAGCTTTGCTTTCTTC------AGGTAAATTGCAGCTGGCAGACACAAAGTATTTTAACTTCCTGTCTAACTTCTTTTAAAACATTATCTGCATCTGTCCC-TATTTTTGTACCATCTCTTTTTGTCCCAGAGAATCTTCCTTTCGGTATACACCTTTATCTGAGATCTTGCTCAA-TCACATTTCCTCTGGGA-----CTTCATCAACTTTCTTCTCTCTCTC-TCTAGTGAGAAA---TTCCAGTTAGTTTgttaagaacctggactt--agtctagctccaccact-----gctagctatgtgaacttgg i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41565312 303 + 83067054 CTTTAGAATT-GGGGGACAGCCTTGTTTTCTTC------AAGTAACTGACAGCTAGCAGATATGAAATATTTTAACTTCCTGTCTAACCTCTTTTAAAATGTTATCTGCATCTGTCCC-AATCTTTATGCCATCTCCTCTCGTCCCAGAGAATCTTCCTTTCAGAATAAACCTGTATATGTGCTCTTGCTCAAGTCACATTTGCTTTGGGC-----TTTCATCAGTTATCT--TCTCTTTC-TTtagtgggaaa---cagcagagagtttgttaagaactag-actc--agtatgccttcaccact-----gctagttatgtcaacttgg i micMur3.chr19 I 122 C 0 s otoGar3.GL873546 11282275 289 - 20685099 CTTTAAA-----------AGCTTTGCTTTCTTC-------TTTAAGTGGCATCCAGCAGACATTAAGTATTTTAACTTTCTGTCTACCCTCCTTTAAAATG-TATGGCCATCTGTCCT-GATCTTTATGTCATCTCTTC---TCCCAGAGAGTCTTTCCTTCTGAATAAACTTTTATCCATGCTCTTGCTCAAATCACATTTCCACTGGGA-----TTTCATCAATTAGCT--TCTCCTTCTTTTAGTGggaaa---tagtagagagtttgtcaagaacttg-attc--tgtatgccttcatgacc-----actagctgtctgggcttga i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112366171 308 - 122678785 TTTCAGAACTGGGGGGACAGCTTTGCTTTCCTATTTATAAAGCAAAAGAAATCTAGCAG---CAAAGTACTTTAACTTCTTGTCTAACCTCTTTTAAAATCCTATCTGCATCTGTC-C-TATCTTTGTGTTGCTTCCTCTGATCCCAGAGCACCTTCCTGTCAGGACAAATCATTATCTGTGCTCTAGCTCAA-TCACAT---CTCTGGGA-----TTTCATTTGTTATTT--CCTCTTTC-TCTAGTAGGACC---CAGTGGTGAGCTTGTTAAGAACCCAGATCC--AGCAcacctgggtagctcactggttgagcatttgcctttgg i canFam3.chr1 C 0 I 120 s dasNov3.JH575754 546785 311 - 2150887 CCTTAAAATT-GGGGGATAGCTTTGCTTTCTTCTTCACCAAGTAAATGAAAGGCAGCAGGCATAAAGCATTTTTATTTCCTGTCTAACCTCATTTAAAGCATTATCTGCATCTGCCCCTTATCTTTATGCCATTTCCTTTCTTCCC------TCTTTTGTTTAGGATGAACTCTT---TATACTCTTGCTCAA-TCTCATCTGCTGCAGGACTTTCCTTCATCAATTAACT--CCTCTCTC-Tagagagagatacggtagtagtgagtttgttaagaacccagattcaaagactgcctctactgct-----actagctgtgtgaatttgg i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=298251.000000 s hg38.chr18_GL383571v1_alt 195095 25 + 198278 gcatattatttagaagtctgtgtct s panTro5.chr18 65104777 25 + 78221452 gcatattatttagaagtctgtgtct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223763 25 + 77229886 gcatattatttagaagtctgtgtct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443243 25 + 17472758 gcatattatttagaagtctgtgtct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485218 25 - 152096393 gcatattatttagaagtctgtgtct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434276 25 + 70235451 atatattatttaGAAGTCTGTGTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125588 25 - 75711847 ATATATTATTTAGAAGTCTGTGTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13684975 25 - 18804593 atatattatttaGAAGTCTGTGTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296700 25 + 18905526 atatattatttaGAAGTCTGTGTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126013 25 - 72318688 gtatattatttagaagtctgtgtct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461955 25 - 1517660 atatattatttaGAAGTCTGTGTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557745 25 + 6513552 gtatattatttaGAAGTCTGTGTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338579 25 + 117903854 gcatattatttaGAAGCCCGAGTCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515841 25 - 31320352 gcatattatttagaagtctgagtct i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718128 25 + 2203405 gcatattatttagaagcctgagtct i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665907 25 - 14941987 acatactatttagaagcctgagtct i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41565615 25 + 83067054 gcataatatttagaagtctctgtct i micMur3.chr19 C 0 I 352 s otoGar3.GL873546 11282564 25 - 20685099 tcgtattatttagaaatccatgtct i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 547096 12 - 2150887 gtgtactattta------------- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112366479 120 - 122678785 I a score=25976.000000 s hg38.chr18_GL383571v1_alt 195120 2 + 198278 GT s panTro5.chr18 65104802 2 + 78221452 GT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223788 2 + 77229886 GT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443268 2 + 17472758 GT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485243 2 - 152096393 GT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434301 2 + 70235451 GT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125613 2 - 75711847 GT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685000 2 - 18804593 GT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296725 2 + 18905526 GT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126038 2 - 72318688 GT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461980 2 - 1517660 GT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557770 2 + 6513552 GT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338604 2 + 117903854 GT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515866 2 - 31320352 GT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718153 2 + 2203405 GT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665932 2 - 14941987 GT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11282589 2 - 20685099 gt i otoGar3.GL873546 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 547108 0 - 2150887 C e canFam3.chr1 112366479 120 - 122678785 I a score=639320.000000 s hg38.chr18_GL383571v1_alt 195122 78 + 198278 cccgggaggcagaggttgcggtgagccgagattgtgccattgcactacagcctgggcaacaagagcaaaattccatct s panTro5.chr18 65104804 78 + 78221452 cccgggaggcagaggttgcggtgagccgagattgtgccattgcactacagcctgggcaacaagagcaaaattccatct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223790 78 + 77229886 cccaggaggcagaggttgcggtgagccgagattgtgccattgcactacagactgggcaacaatagcaaaattccatct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443270 78 + 17472758 ccggggaggcagaggttgcggtgagccgagattgtgctattgcactacagcctgggcaacaagagcaaaattccatct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485245 78 - 152096393 cccgggaggcagaggttgcagtgagccgagattgtgccattgcactacaccctgggcaacaagagcaaaattccatct i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434303 78 + 70235451 cccgggaggcagaggttgctgtgagccgagactgtgccattgcactacagcctgggcaacaagagcgaaattccatct i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125615 78 - 75711847 cccgggaggcagaggttgctgtgagccgagactgtgccattgcactacagcctgggcaacaagagcgaaattccatct i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685002 78 - 18804593 cccgggaggcagaggttgctgtgagccgagactgtgccattgcactacagcctgggcaacaagagcgaaattccatct i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296727 78 + 18905526 cccgggaggcagaggttgctgtgagccgagacggtgccattgcactacagcctgggcaacaagagcgaaattccatct i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126040 78 - 72318688 cccgggaggcagaggttgctgtaagccgagactgtgccattgcactacagcctgggcaacaagagcgaaattccatct i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 461982 78 - 1517660 cccgggaggcagaggttgctgtgagccgagactgtgccattgcactacagcctgggcaacaagagtgaaattccatct i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557772 78 + 6513552 cccgggaggcagaggttgctgtgagccgagactgtgccattgcactacagcctgggcaacaagagcaaaattccatct i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338606 66 + 117903854 TCTGggaggcggaggttgcagtgagccgagatcgcgcc--------acagcctgggcaacaagagcgaaa----actc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515868 66 - 31320352 Tccgggaggcagaggttgcagtgagccgagatcgtgcc--------acagcctgggcaacaagagtgaaa----actc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718155 66 + 2203405 TCTGggaggcggagattgcagtgagccgagatcgtgcc--------acagcctgggcaacaagagtgaaa----actc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3665934 66 - 14941987 Tccgggaggcggagattgcagtgagccgagatcacgcc--------acagcctgggcaacaaaagcgaaa----actc i aotNan1.NW_018502140v1 C 0 C 0 s dasNov3.JH575754 547108 8 - 2150887 --------------------------------------------------------------------aacttcat-- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e mm10.chr1 111896095 2962 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e canFam3.chr1 112366479 120 - 122678785 I e otoGar3.GL873546 11282591 0 - 20685099 C a score=13600.000000 s hg38.chr18_GL383571v1_alt 195200 1 + 198278 c s panTro5.chr18 65104882 1 + 78221452 c i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223868 1 + 77229886 c i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443348 1 + 17472758 c i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485323 1 - 152096393 c i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434381 1 + 70235451 c i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125693 1 - 75711847 c i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685080 1 - 18804593 c i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296805 1 + 18905526 c i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126118 1 - 72318688 c i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462060 1 - 1517660 c i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557850 1 + 6513552 c i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338672 1 + 117903854 c i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515934 1 - 31320352 c i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718221 1 + 2203405 c i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666000 1 - 14941987 c i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111899057 1 + 195471971 c i mm10.chr1 I 2962 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 547116 0 - 2150887 C e canFam3.chr1 112366479 120 - 122678785 I e otoGar3.GL873546 11282591 0 - 20685099 C a score=71386.000000 s hg38.chr18_GL383571v1_alt 195201 40 + 198278 aaaaa--------------aaaaaaaaaaaaaaa-aaaaa----aaaaGctgtgtctgt s panTro5.chr18 65104883 26 + 78221452 aaaaa--------------aaaaaaaaaa-------------------Gctgtgtctgt i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223869 37 + 77229886 aaaaa--------------aaaaaaaaaa---aa-aaaaa----aaaGActgtgtctgt i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443349 36 + 17472758 aaaaa--------------aaaaaaaaaa----a-aaaaa----aaaaGctgtgtctgt i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485324 31 - 152096393 aaaaa--------------aaaaaaaaaa----------a----aaaaGctgtgtctgt i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434382 51 + 70235451 aaaaaaaataagataaaataaaataaaaa---TT-AAAAA----AAAGGctgtgtctgt i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125694 51 - 75711847 aaaaaaaataagataaaataaaataaaaa---TT-TAAAA----AAAGGctgtgtctgt i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685081 51 - 18804593 aaaaaaaataagataaaataaaataaaaa---TT-AAAAA----AAAGGctgtgtctgt i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296806 53 + 18905526 aaaaaaaataagataaaataaaataaaaa-aTTA-AAAAA----AAAGGctgtgtctgt i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126119 51 - 72318688 aaaaaaaataagataaaataaaataaaaa---TT-TAAAA----AAAGGctgtgtctgt i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462061 52 - 1517660 aaaaaaaataagataaaataaaataaaaa---TTAAAAAA----AAAGGctgtgtctgt i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557851 52 + 6513552 aaataaaataagataaaataaaataaaaa---TTAAAAAA----AAAGGctgtgtctgt i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338673 29 + 117903854 gAAACACATA---------CACACAAAaa---tc------------------tgtctgt i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19515935 31 - 31320352 gAAACATATA---------CACACAGAAG---tc----------------tgtgtctgt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718222 37 + 2203405 gAAAAACATA---------CACACAAAAG---TC----------TGTGtctgtgtctgt i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666001 31 - 14941987 gAAACGCATA---------CACACAAAAG---tc----------------tgtgtctgt i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111899058 33 + 195471971 aaaaaaagga---------aaaaaAAAAA---CCAGAAAA----AAATG---------- i mm10.chr1 C 0 C 0 s canFam3.chr1 112366599 55 - 122678785 aaaaagaaaaagaaaaaaagaaaaaaaag---aa-ccaagcttcaaagttagtctctac i canFam3.chr1 I 120 I 39 s dasNov3.JH575754 547116 6 - 2150887 ---------------------------------------------------gcctct-- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e otoGar3.GL873546 11282591 0 - 20685099 C a score=1747330.000000 s hg38.chr18_GL383571v1_alt 195241 141 + 198278 gtttcctcagctgtaaaacagg-ataataatataacctccctggtaaggcatttgatgagcattaaatgaaatacttataaagtatttagaagaagac---------cttaataaatattggctcttattTTATCTTTGAC------CTCTCTCTCT-- s panTro5.chr18 65104909 141 + 78221452 gtttcctcagctgtaaaacagg-ataataatataacctccctggtaaggcatttgatgagcattaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGAC------CTCTCTCTCT-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64223906 141 + 77229886 gtttcctcagctgtaaaacagg-ataataatataacctccctggtaaggcatttgatgagcattaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGAC------CTCTCTCTCT-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443385 141 + 17472758 gtttcctcagctgtaaaacagg-ataataatataacctccctggtaaggcatttggtgagcattaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGAC------CTCTCTCTCT-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485355 141 - 152096393 gtttcctcagctgtaaaatagg-ataataatataacctccctagtaaggcatttggtgagcattaaatgaaatacttataaagtgtttagaaggagac---------cttaataaatattggctcttattTTATCTTTGAC------CTCTCTCTCT-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434433 142 + 70235451 gtttccttggctgtaaaatagg-ataataatataacctccctagtaa-gcacttggtgagcattaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGACCT----CTCTCTCTCT-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63125745 142 - 75711847 gtttccttggctgtaaaatagg-ataataatataacctccctagtaa-gcacttggtgagcattaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGACCT----CTCTCTCTCT-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685132 140 - 18804593 gtttccttggctgtaaaatagg-ataataatataacctccctagtaa-gcacttggtgagccttaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGAC------CTCTCTCTCT-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13296859 142 + 18905526 gtttcctcggctgtaaaatagg-ataataatataacctccctagtaa-gcacttggtgagcattaaatgaaatacttataaagtatttagaaggagac---------cttaataaatattggctcttattTTATCTTTGACCT----CTCTCTCTCT-- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126170 142 - 72318688 gtttcctcagctgtaaaatagg-ataataatataacctccctagtaa-gcatttggtgagcattaaatgaaatacttataaagtatgtagaaggagac---------cttaataaatattggctcttattTTATCTTTGACCT----CTCTCTCTCT-- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462113 139 - 1517660 gtttcctcggctgtaaaatagg-ataataatataacctccctagtaa-gcacttggtgagcattaaatgaaatacttataaagtattt---aggagac---------cttaataaatattggctcttattTTATCTTTGACCT----CTCTCTCTCT-- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3557903 138 + 6513552 gtttcctcagctgtaaaatagg-ataataatataacctccctagtaa-gcatttggtgagcattaaatgaaatacttataaagtatttaggaggagac---------cttaataaatattggctcttattTTATCTTTGAC--------CTCTCTCT-- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105338702 147 + 117903854 gtttcctcagatgtaaaatagg-ataataatataacctccctagtaaggcgtttggtgaacattaaatgaaatacttatagaatacttaggaGGAGAC---------TTTAATCAATTTTGGCTCTTATTTTATCTTTGACTTTGAtctctctctct-- i calJac3.chr13 C 0 I 357 s saiBol1.JH378121 19515966 141 - 31320352 gtttcctcagatgtaaaataag-ataataatataacttccctagtaacgcatttggtgagcattaaatgaaatacttataaagtacttaggaGGAGAC---------TTTAGTAAATTTTAGCTCTTATTTTACCTTTGAc------ctctctctct-- i saiBol1.JH378121 C 0 I 38 s cebCap1.NW_016107689v1 1718259 141 + 2203405 gtttcctcagatgtaaaatagg-ataataatataacctccctagtaaggtgtttggtgagcattaaatgaaatacttataaagtacttaggaGGAGAC---------TTTAATAAACTTTGGCTCTTATTTTATCTTTGAC------ctctctctct-- i cebCap1.NW_016107689v1 C 0 I 50 s aotNan1.NW_018502140v1 3666032 145 - 14941987 gtttcctcagatgtaaaatagg-ataataatataacctccctagtaaggcgtttggtgagcattaaatgaaatacttataaagtacttaggaggacactttaataaatttaataaattttggctcttat-----CTTTGAA------CTCTCTCTCT-- i aotNan1.NW_018502140v1 C 0 I 18 s otoGar3.GL873546 11282591 136 - 20685099 gtttcctcagctgtaaaatatg-ataataatataagctctccagtaaggcatttggcaaacaccagatgaaatacttata-----tttagaaggaggc---------cttaataaatattggttattatATTATCTTTGGC------CTCTCCCCCT-- i otoGar3.GL873546 C 0 I 2 s mm10.chr1 111899091 94 + 195471971 -------AAGAAATAAACCAGTCACAATTACAAAACT-------TAA--------------ACTGAAGAAAA----------------AAGAGAAGAA---------------AATTATACACTGCTATTTATTCATTAACTG----CTTCCTCTCT-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112366693 141 - 122678785 gtttcctcagctgtaaaatatg-ataaaaatataacttctctgatacagcttttggtgagcattaaatgaggaacttctaaagtacttagaaGGAGAC---------CTCAGTAAATATTGGCTGCCATTCTATCCCTGAC------CTGTCCTTCT-- i canFam3.chr1 I 39 I 2 s dasNov3.JH575754 547122 141 - 2150887 gttttctcagctgtgaaatagg-attataacacggcctccttggtaaggtgcttgctgagcattaaaggacatacttgtgaagtattta--aggagga---------cctaagaaatattggctattattTTATCTCTGAC------CTCCCCCTCTCT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=389865.000000 s hg38.chr18_GL383571v1_alt 195382 37 + 198278 ACCAGCTACTTATCCTGAACATGTAAATATAGAGCCT s panTro5.chr18 65105050 37 + 78221452 ACCAGCTACTTATCCTGAACATGTAAGTATAGAGCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224047 37 + 77229886 ACCAGCTACTTATCCTGAACATGTAAGTATAGAGCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443526 37 + 17472758 ACCAGCTACTTATCCTGAACATGTAAGTATAGAGCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485496 37 - 152096393 ACCAGCTACTTATCCTGAACATGCAAGCATAGATCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57434575 37 + 70235451 ACCAGCTACTTATCCTGAACTTGTAAGCATAGAGCCT i rheMac8.chr18 C 0 I 524 s macFas5.chr18 63125887 37 - 75711847 ACCAGCTACTTATCCTGAACTTGTAAGCATAGAGCCT i macFas5.chr18 C 0 I 524 s macNem1.NW_012016688v1 13685272 37 - 18804593 ACCAGCTACTTATCCTGAACTTGTAAGCATAGAGCCT i macNem1.NW_012016688v1 C 0 I 524 s cerAty1.NW_012001075v1 13297001 37 + 18905526 ACCAGCTACTTATCCTGAACTTGTAAGCATAGAGCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126312 37 - 72318688 ACCAGCTACTTATCCTGAACTTGTAAGCACAGAGCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462252 37 - 1517660 ACCAGCTACTTATCCTGAACTTGTAAGCACAGAGCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558041 37 + 6513552 ACCAGCTACTTATCCTGAACTTGTAAGTATAGAGCCT i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19516145 37 - 31320352 cccAGCTATTTATTCTGAACATGTAAGCATAGAGTCT i saiBol1.JH378121 I 38 C 0 s cebCap1.NW_016107689v1 1718450 37 + 2203405 CCCAGCTATTTATTCTGAACATGTAAGCATAGAGTCT i cebCap1.NW_016107689v1 I 50 C 0 s aotNan1.NW_018502140v1 3666195 37 - 14941987 CCCAGCTATTTATTCTGAACATGTAAGCATAGAGTCT i aotNan1.NW_018502140v1 I 18 C 0 s otoGar3.GL873546 11282729 35 - 20685099 GCTAGCTCTTTATCTGGAAAAT--AAGCATAGGGTCT i otoGar3.GL873546 I 2 C 0 s mm10.chr1 111899185 37 + 195471971 TCTAGGTAATCTTCCTGAATAGATCTACATAGTATCT i mm10.chr1 C 0 C 0 s canFam3.chr1 112366836 37 - 122678785 ACCAGATTTGTAACCTGAACTTGCAAGCTTGTAGTCT i canFam3.chr1 I 2 C 0 s dasNov3.JH575754 547263 37 - 2150887 ACAAGCTCTTCACCCTCATCCTATAAAGGTAGTGTCT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105338849 357 + 117903854 I a score=88853.000000 s hg38.chr18_GL383571v1_alt 195419 10 + 198278 CTCCCTCTGT s panTro5.chr18 65105087 10 + 78221452 CTCCCTCTGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224084 10 + 77229886 CTCCCTCTGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443563 10 + 17472758 CTCCCTCTGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485533 10 - 152096393 CTCCTGCTGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435136 10 + 70235451 CTCCCCCTGT i rheMac8.chr18 I 524 C 0 s macFas5.chr18 63126448 10 - 75711847 CTCCCCCTGT i macFas5.chr18 I 524 C 0 s macNem1.NW_012016688v1 13685833 10 - 18804593 CTCCCCCTGT i macNem1.NW_012016688v1 I 524 C 0 s cerAty1.NW_012001075v1 13297038 10 + 18905526 CTCCCCCTGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126349 9 - 72318688 CTCCCCC-GC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462289 10 - 1517660 CTCCCCCTGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558078 10 + 6513552 CTCCCCCTGT i colAng1.NW_012115433v1 C 0 C 0 s saiBol1.JH378121 19516182 10 - 31320352 CTCCCACTGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718487 10 + 2203405 CTCCCACTGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666232 10 - 14941987 CTCCCACTGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11282764 10 - 20685099 CCTTCACCAT i otoGar3.GL873546 C 0 I 1 s mm10.chr1 111899222 10 + 195471971 TTCCCACCTT i mm10.chr1 C 0 I 6 s canFam3.chr1 112366873 10 - 122678785 CTTCCATCAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547300 10 - 2150887 TTTTCGGTAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e calJac3.chr13 105338849 357 + 117903854 I a score=91440.000000 s hg38.chr18_GL383571v1_alt 195429 6 + 198278 AAAAAT s panTro5.chr18 65105097 6 + 78221452 AAAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224094 6 + 77229886 AAAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443573 6 + 17472758 AAAAAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485543 6 - 152096393 AAAAAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435146 6 + 70235451 AAAAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126458 6 - 75711847 AAAACT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685843 6 - 18804593 AAAAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297048 6 + 18905526 AAAAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126358 6 - 72318688 AAAAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462299 6 - 1517660 AAAAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558088 6 + 6513552 AAAAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339206 6 + 117903854 AAAATT i calJac3.chr13 I 357 C 0 s saiBol1.JH378121 19516192 6 - 31320352 AAAAAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718497 6 + 2203405 AAAAAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666242 6 - 14941987 AAAAAT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11282775 6 - 20685099 AAAAAC i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111899238 6 + 195471971 AAAAAT i mm10.chr1 I 6 C 0 s canFam3.chr1 112366883 6 - 122678785 AGAAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547310 6 - 2150887 AAAAAT i dasNov3.JH575754 C 0 I 13 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=7962.000000 s hg38.chr18_GL383571v1_alt 195435 4 + 198278 TCT------C s panTro5.chr18 65105103 4 + 78221452 TCT------C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224100 4 + 77229886 TCT------C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443579 4 + 17472758 TCT------C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485549 4 - 152096393 TCT------C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435152 4 + 70235451 TCT------C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126464 4 - 75711847 TCT------C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685849 4 - 18804593 TCT------C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297054 4 + 18905526 TCT------C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126364 4 - 72318688 TCT------C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462305 4 - 1517660 TCT------C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558094 4 + 6513552 TCT------C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339212 5 + 117903854 TCTA-----C i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516198 5 - 31320352 TCTA-----C i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718503 5 + 2203405 TCTA-----C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666248 5 - 14941987 TCTA-----C i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11282781 4 - 20685099 TAT------C i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111899244 10 + 195471971 CTCACATTGT i mm10.chr1 C 0 C 0 s canFam3.chr1 112366889 5 - 122678785 ATCA-----C i canFam3.chr1 C 0 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I e dasNov3.JH575754 547316 13 - 2150887 I a score=1432101.000000 s hg38.chr18_GL383571v1_alt 195439 143 + 198278 TCTTTTGCTC-T--TTTTT-ATTCAACTACTACCTTATTTT-TTTCTTTT-ACTCTCATCTGAGTGTATT-AA----TAGTTTACCTGCATTAGTTTCACCCTATCTATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT s panTro5.chr18 65105107 141 + 78221452 T--TTTGCTC-T--TTTTT-ATTCAACTACTACCTTATTTT-TTTCTTTT-ACTCTCATCTGAGTGTATT-AA----TAGTTTACCTGCATTAGTTTCACCCTATCTATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224104 141 + 77229886 T--TTTGCTC-T--TTTTT-ATTCAACTACTACCTTATTTT-TTTCTTTT-ACTCTCATCTGAGTGTATT-AA----TAGTTTACCTGCATTAGTTTCACCCTATCTATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443583 143 + 17472758 TCTTTTGCTC-T--TTTTT-ATTCAACTACTACCTATTTTT-TTTCTTTT-ACTCTCATCTGAGTGTATT-AA----TAGTTTACATGCATTAGTTTCACCCTATCTATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485553 143 - 152096393 TTTTTTGCTC-T--TTTTT-ATTCAACTACTACCTTATTTT-TTTCTTTT-ACTCTCATCTGAGTGTATT-AA----TAGTTTACATGCATTAGTTTTACCCTATGTATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435156 144 + 70235451 TTTTTTGCTCTT--TTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTTTCATCTGAGTGTATT-AG----TAGTTTACTTGCATTAGTTTCACCCCATCCATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126468 144 - 75711847 TTTTTTGCTCTT--TTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTTTCATCTGAGTGTATT-AG----TAGTTTACTTGCATTAGTTTCACCCCATCCATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13685853 148 - 18804593 TTTTTTGCTCTT--TTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTTTCATCTGAGTATATT-AGTAGTTAGTTTACTTGCATTAGTTTCACCCCATCCATTACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297058 148 + 18905526 TTTTTTGCTCTT--TTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTTTCATCTGAGTGTATT-AGTAGTTAGTTTACTTGCATTAGTTTCACCCCATCCATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126368 145 - 72318688 TTTTTTGCTCTT--TTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTCTCATCTGAGTGTATT-AGTAGTTAGTTTACATGTATTAGTTTCACCCCATCCATCACAAAATT---CTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462309 148 - 1517660 TTTTTTGCTCTT--TTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTTTCATCTGAGTGTATT-AGTAGTTAGTTTACTTGCATTAGTTTCACCCCATCCATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558098 145 + 6513552 TTTTTTGCTC-----TTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTCTCATCTGAGTGTATT-AGTAGTTAGTTTACATGCATTAGTTTCACCCCATCCATCACAAAATTCTACTAATTTTGCCAC----CTAT---TTCTAAAACAAATCCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339217 151 + 117903854 CATTTTGCTCTTTGTTTTTAATTAAAATACTACATTATTTT-TTTCTTTT-ATTCTCATCTATGTGTAGTAAATAGTTACTTTATATGCATTAATTTCACCCCACCTATCACAAAATCATACC-TTTTTGCTGC----CCAT---TTCTAAAACAAATGCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516203 149 - 31320352 CATTTTGCTCTTTGTTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTCTCATCTATGTGTATT-AATAGTTACTTTACACGCATTAATTTCACCCCATCGATCATAAAATCCTACC-TTTTTGCCAC----CCAT---TTCTAAACCAAATCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718508 136 + 2203405 CATTTTGCTCTTTGTTTTT-ATTCAAATACTACCTTATTT---------------TCATCTATGTGTATT-AATAGTAACTTTACAAGCATTAATTTCACCCCATCTATCATAAAATCCTATC-TTTTTGCCAC----CCAT---TTCTAAAACAAATCCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666253 149 - 14941987 CATTTTGCTCTTTGTTTTT-ATTCAAATACTACCTTATTTT-TTTCTTTT-ATTCTCATCTGTATGTATT-AATAGTTACTTTACACGCATTAATTTCACCCCATCTATCACAAAATCCTACC-TTTTTGCTGC----CCAT---TTCTAAAACAAATCCT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11282785 142 - 20685099 TCTTTGG-------TGTTT-ATTTGGATACTACCCTAATTT-TCCTTTTTAATTCCCATCTGACTTTTTT-AAGAGTTAGTTTACATTTCTTGGCCTCGCTCAATCTATTACAAAATCCTGCTGATGCTTCCAC----CTAT---TTCTAAAACAAATC-- i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111899254 145 + 195471971 TTTGTTGGTATT--TTCCT-ATT-GGACACTGCCCCCTGTT-TTTTCTTT----TCTATGTGAGTTGAAT-ACAAGTTAGTACACATTGATTGAATGCACAACA--CAACACACGGTCCTATTGATTTTACCAC----TCACTGATTCTAAAACTTGCCTT i mm10.chr1 C 0 C 0 s canFam3.chr1 112366894 139 - 122678785 TTTGCTTTTCCT--TTTTC-ATTTGGACACTGCCTTAAGTTGTTCCTTTT-ATTCCCATCC------ACA-AA----GAATTTACATTTACTGGCTTCACTCAGTCTACCGTGGAGTCCTACTGATTTTACCTC----CCAT---TTCTAAAACAAATCCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547329 132 - 2150887 TTTTTTG-------TTTTT-ATTTGGTTACCATCTTAATTT-TCTCCTTTCATTCTCA-------------AA---CAAGCTTCCATTTGCTGGCCCCACCTAA-CCATCACCAACTTATTCAAAGTTTGGCACCTAACTAT---TTCTAAAACTAAACTC i dasNov3.JH575754 I 13 C 0 e micMur3.chr19 41565640 352 + 83067054 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=647122.000000 s hg38.chr18_GL383571v1_alt 195582 47 + 198278 CTCCTCTCTAGGTCACTGCCCTAA-CTCATACTTTTATTATCTCTCAC s panTro5.chr18 65105248 47 + 78221452 CTCCTCTCTAGGTCACTGCCCTAA-CTCATACTTTTATTATCTCTCAC i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224245 47 + 77229886 CTCCTCTCTAGGTCACTGCCCTAA-CTCATACTTTTATTATCTCTCAC i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443726 47 + 17472758 CTCCTCTCTAGGTCACTGCGCTAA-CTCATACTTTTATTATCTCTCAC i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485696 47 - 152096393 CTCCTCTCTAGGTGACTGCCCTAA-CTCATACTTTTATTATCTCTCAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435300 47 + 70235451 CTCCTCTCTAGGCTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126612 47 - 75711847 CTCCTCTCTAGGCTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686001 47 - 18804593 CTCCTCTCTAGGCTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297206 47 + 18905526 CTCCTCTCTAGGCTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126513 47 - 72318688 TTCCTCTCTAGGTTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462457 47 - 1517660 CTCCTCTCTGGGCTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558243 47 + 6513552 CTCCTCTCTAGGTTATGGCCCTAA-CTCATACTTTTATTATCTCTCAC i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339368 47 + 117903854 CTCCCATCTAGGTCACTGCCCTAA-CTCATACTTTTGTTATTCCTTAC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516352 47 - 31320352 CTCCCATCTAGGTCACTGCCCTAA-CTCATACTTTTTTTATTCCTCAC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718644 47 + 2203405 CTGCCATCTAGGTCACTGCCCTAA-CTCATACTTTTGTTATTCCTTAC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666402 47 - 14941987 CTCCCATCTAGGTCACTGCCCTAA-CTCATACTTTTGTTATTCCTTAC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41565992 47 + 83067054 CTCCTCTCCATGTCACTGGTCTAA-TTCATACTTTTATTATTTCCTAG i micMur3.chr19 I 352 C 0 s otoGar3.GL873546 11282927 43 - 20685099 ----TCTCTATGTCTCTGCTCTAA-CTCATACTTTTATTATTTCTCAC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111899399 43 + 195471971 CTTATCTCTA----ACTATCCAAA-TTCATATGTTCATTTTCTCACGC i mm10.chr1 C 0 I 10448 s canFam3.chr1 112367033 47 - 122678785 CTCCTCTCTATGTCACTCCTCTAA-CTCATACTTTTATTATCTCTCAC i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547461 48 - 2150887 TTCTTTCTTCACCCCTTGCCCTAATTTCATGCTTTTATCATCTCTCAC i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=405379.000000 s hg38.chr18_GL383571v1_alt 195629 34 + 198278 CTGTTCTGTGCCAAAAGCCTTATGCCTGCTTTGA s panTro5.chr18 65105295 34 + 78221452 CTGTTCTGTGCCAAAAGCCTTATGCCTACTTTGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224292 34 + 77229886 CTGTTCTGTGCCAAAAGCCTTATGCCTACTTTGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443773 34 + 17472758 CTGTTCTGTGCCAAAAGCCTTATGCCTGCTTTGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485743 34 - 152096393 TTGTCCTGTGCCAAAAGCCTTATGCCTGCTTTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435347 34 + 70235451 CTGTCCTGTGCCAAAAACCTTATGCCTGCTTTGA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126659 34 - 75711847 CTGTCCTGTGCCAAAAACCTTATGCCTGCTTTGA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686048 34 - 18804593 CTGTCCTGTGCCAAAAACCTTATGCCTGCTTTGA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297253 34 + 18905526 CTGTCCTGTGCCAAAAACCTTATGCCTGCTTTGA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126560 34 - 72318688 CTGTCCTGTGCCAAAAACCTTATGCCTGCTTTGA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462504 33 - 1517660 CT-TCCTGTGCCAAAAACCTTATGCCTGCTTTGA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558290 34 + 6513552 CTGTCCTGTGCCAAAAACCTTATGCCTGCTTTGA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339415 34 + 117903854 CTCTCTTGTACCAAAAGACTTATGCCTGCTTTGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516399 34 - 31320352 CTCTCTTGTACCAAAAGACTTATGCCTGCTTTGA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718691 32 + 2203405 TTCTCTTGTACCAAAAGAC--ATGCCTGCTTTGA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666449 33 - 14941987 CTCTCTTGTACCAAAAGTC-TATGCCTGCTTTGA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41566039 34 + 83067054 CTAGCCTATGCCAAGAGCCTTGTGCCTGCTTTGG i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11282970 34 - 20685099 CTATCCTATGTGAAGGGTCTCATTCCTACTTTGG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112367080 27 - 122678785 CTAGTCTAGGCCAAGAGGC-------TGCTTTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547509 34 - 2150887 CTTCTGTATGCCAAGAGCTTCATAACTGCTTTGG i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111899442 10448 + 195471971 I e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=360869.000000 s hg38.chr18_GL383571v1_alt 195663 26 + 198278 AACAGAAGAATGACTTTATTCTAAAT s panTro5.chr18 65105329 26 + 78221452 AACAGAAGAATGACTTTATTCTAAAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224326 26 + 77229886 AACAGAAGAATGACTTTATTCTAAAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443807 26 + 17472758 AACAGAAGAATGACTTTATTCtaaat i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485777 26 - 152096393 AACAGAAGAATGACTTTATTCTAAAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435381 26 + 70235451 AACAGACGAATGATTTCATTCCAAAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126693 26 - 75711847 AACAGACGAATGATTTCATTCCAAAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686082 26 - 18804593 AACAGACGAATGATTTCATTCCAAAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297287 26 + 18905526 AACAGACGAATGATTTCATTCCAAAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126594 26 - 72318688 AACAGAAGAATGATTTCATTCCAAAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462537 26 - 1517660 AACAGACGAATGATTTCATTCCAAAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558324 26 + 6513552 AACAGAAGAATGATTTCATTCCAAAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339449 26 + 117903854 AGCAGAAGAAGGACTTTATTCTAAAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516433 26 - 31320352 AACAGAAGAATGACTTTATTCTAAAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718723 26 + 2203405 AACAGAAGAATGACTTTATTCTAAAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666482 26 - 14941987 AACAGAAAAATGACTTTATTCTAAAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41566073 26 + 83067054 AATAGAAGAATGATTTTCTTCTAAAG i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11283004 26 - 20685099 AAAAGGAAAATGATTTTATTCTAAAG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111909890 26 + 195471971 AATGAAAGAGTGAATTTCACCTAAGG i mm10.chr1 I 10448 C 0 s canFam3.chr1 112367107 26 - 122678785 AATAGAAGTGCAATTTTATCCTAAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547543 26 - 2150887 AATAGAAGTGCAATTTTATCCTAAAG i dasNov3.JH575754 C 0 I 363 e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=1714427.000000 s hg38.chr18_GL383571v1_alt 195689 145 + 198278 AAATATATAATTTAGT-AAAAAAGAAAAG----CCTTAAC-AAAACGAAGAT-ATGGCAATACACA-CTTGCTATG------------TCAATA-TTTT-AAAA----------TAAATTACAAGGTTTAATTACGTTCTTTGACTAGGAAATTTTAAAAGAAGAAACGTGATGACA s panTro5.chr18 65105355 145 + 78221452 AAATATATAATTTAGT-AAAAAAGAAAAG----TCTTAAC-AAAACGAAGAT-ATGGCAATACACA-CTTGCTATG------------TCAATA-TTTT-AAAA----------TAAATTACAAGGTTTAATTACGTTCTTTGACTAGGAAATTTTAAAAGAAGAAACGTGATGACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224352 145 + 77229886 AAATATATAATTTAGT-AAAAAAGAAAAG----TCTTAAC-AAAACGAAGAT-ATGGCAATACACA-CTTGCTATG------------TCAATA-TTTT-AAAA----------TAAATTACAAGGTTTAATTACGTTCTTTGACTAGGAAATTTTAAAAGAAGAAACGTGATGACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443833 146 + 17472758 aaatatataatttagtaaaaaaagaaaAG----TCTTAAC-AAAACGAAGAT-ATGGCAATACACA-CTTGCTATG------------TCAATA-TTTT-AAAA----------TAAATTACAAGGTTTAATTACGTTCTTTGACTAGAAAATTTTAAAAGAAGAAACATGATGACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485803 143 - 152096393 GAATATATAATTTATT-AAAAAAGAAAAG----TCTTAAC-AAAATGAAGAT-ATGGCAATACACA-CTTGCAATG------------TCAATA-TTTT-AAAA----------C--ATTTCAAAGTTTGATTACATTCTTTGACTAGGAAATTTTAAAAGAAGAAACATGATGACA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435407 143 + 70235451 AAATATATAATTTAGT-AAAAAAG--AAG----TCTTAAC-AAAATGAAGAT-ACGGCAATACATA-CTTGCAATG------------TCAATA-TTTT-AAAA----------TGAATTTCAAGGTTTGATTATGTTCTTTGACTAGGAAATTTTAAAAGAAGAAACATGATGACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126719 143 - 75711847 AAATATATAATTTAGT-AAAAAAG--AAG----TCTTAAC-AAAATGAAGAT-ACGGCAATACATA-CTTGCAATG------------TCAATA-TTTT-AAAA----------TGAATTTCAAGGTTTGATTATGTTCTTTGACTAGGAAATTTTAAAAGAAGAAACATGATGACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686108 143 - 18804593 AAATATATAATTTAGT-AAAAAAG--AAG----TCTTAAC-AAAATGAAGAT-ACGGCAATACATA-CTTGCAATG------------TCAATA-TTTT-AAAA----------TGAATTTCAAGGTTTGATTATGTTCTTTGACTAGAAAATTTTAAAAGAAGAAACATGATGACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297313 143 + 18905526 AAATATATAATTTAGT-AAAAAAG--AAG----TCTTAAC-AAAATGAAGAT-ACGGCAATACATA-CTTGCAATG------------TCAATA-TTTT-AAAA----------TGAATTTCAAGGTTCGATTATGTTCTTTGACTAGAAAATTTTAAAAGAAGAAACATGATGACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126620 139 - 72318688 AAATATATAATTTAGT-AAAACAG--AAG----TCTTAAC-AAAATGAAGAT-ACGGCAATACATA-CTTGCAATG------------TCAATA-TTTT-AAAA----------CGAATTTCAAGGTTCGATTATGTTCTTTG----GGAAATTTTAAAAGAAGAAACATGATGACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462563 143 - 1517660 AAATATATAATTTAGT-AAAAAAG--AAG----TCTTAAC-AAAATGAAGAT-ACGGCAATACATA-CTTGCAATG------------TCAATA-TTTT-AAAA----------TGAATTTCAAGGTTCGATTATGTTCTTTGACTAGAAAATTTTAAAAGAAGAAACATGATGACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558350 143 + 6513552 AAATATATAATTTAGT-AAAAAAG--AAG----TCTTAAC-AAAATGAAGAT-ATGGCAATATATA-CTTGCAATA------------TCAATA-TTTT-AAAA----------TGAATTTCAAGGTTCGATTATGTTCTTTGACTAGCAAATTTTAAAAGAAGAAACATGATGACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339475 146 + 117903854 AAACATATAATTTAGT-AAAAAAGGAAAG----CCTTAAC-AAATCGACGAT-ATGGCAGTACACACCTTGCAATG------------GCCATA-TTTT-AAAA----------TAAATTACGAGGTTCGATGACGTTCTTTTACTAGGAAATTTTAAAGGAGGAAACATGATGACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516459 146 - 31320352 AAACATACAATTTAGT-AAAAAAGAAAAA----CCTTAAC-AAATCAAAGAT-ATGGCAATACACACCTTGCAGTG------------TCAATA-TTTT-AAAA----------TAAATTACAAGGTTTGATGATGTTCTTATACTAGGAAATTTTAAAGGAAGAAACATGATGACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718749 142 + 2203405 AAACATACAATTTAGT-AAAAAAGAAAAG----CCTTAAC-----CAAAGAT-ATGACACTACACACCTTGCAATG------------TCAATA-TTTC-GAAG----------TAAATTACAGGGTTTGATGACGTTCTTTTGCTAGGAAATTTTAAAGGAGGAAACATGATGACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666508 146 - 14941987 AAACATATAATTTAGT-AAAAAAGAAAAG----CCTTAAC-AAATCAAAGAT-ATGGGAATGCACACCTTGCAATG------------TCAATA-TTTT-AAAA----------TAAATTACAAGGTTTAATGACGTTCTTTTACTAGGAAATTTTAAAGGAAGAAACATGATGACA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41566099 149 + 83067054 AAATATATAATTTAGT-AAAAGAA--AAAATAGTTTTAACAAAAATGAGGATAATGGCAATACACA-TCTACAATG------------TTAGTA-TTTA-TAAA----------TAAATGACATGATTTGACTATCTACCAGTATTAGGAAATTTTGAAAAAAGAAGCATGATGACA i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11283030 145 - 20685099 AAATATGTAATTTAGT-AAAAGAA--AAA----TGTCCTTAAAAATGAGGAT-ATGGCAATACTTA-TCTACAATG------------TTAGGATTTTT-TAAA----------TAAGTTACATGGTTTGTCTGCTTTCCAATATTAGGACATTTTGAAAAAAGAAGCACGATGACA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111909916 141 + 195471971 AAATACAACAGTAAAT-AAAG-----ACA----TCTTAAT-AAATTTAATAT-ATGGCAAAACATA-GCTTTTAGG------------TCACTA-TTTTCTTAA----------TCAACTATAGGGTTTTATTTCCTTTTATAGCTAGAATATTGGAAAAAAGGAAACATATTGAGT i mm10.chr1 C 0 C 0 s canFam3.chr1 112367133 164 - 122678785 AAATACATAATTAAGT-AAAAAAG---AG----TCATAAG-AAACTGAAGAT-ATGGCCATATGCA-TCTACAATGATGTAGATTTAATTTATA-ATTA-AGAAGTTACCACATTATATTACAAGATTTGATGACTTTCTATTATTTGGCAATTTTGAAAAAAGAAATATGATGGCA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 547932 121 - 2150887 AAATACATAATGTAGT-CAAAACA--TAA----ACTAAAA-GAGATGAAGAT-AAAGTAATACACA-TCTATAATA------------TTAGCA-TTTT-TATA----------TGTGTTACAAGGC----------------------AGTTTGGAAAAAAAGAAGCAGGATGACA i dasNov3.JH575754 I 363 C 0 e proCoq1.NW_012148742v1 1309456 4635 - 1406956 I a score=1590269.000000 s hg38.chr18_GL383571v1_alt 195834 96 + 198278 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGTCTGATAGAGCTGCTTACTAGAAGGACA s panTro5.chr18 65105500 96 + 78221452 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGTCTGATAGAGCTGCTTACTAGAAGGACA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224497 96 + 77229886 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGTCTGATAGAGCTGCTTACTAGAAGGACA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5443979 96 + 17472758 AATTCAAATTCTGGGAAGCATTCCATGTTAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGTCTGATAGAGCTGCTTACTAGAAGGACA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139485946 96 - 152096393 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTT-ATTTACTGAGCCAGAAGGCAAACCTGGATGGTCTGATAGAGCTGCTTACTGGAGGGACG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435550 96 + 70235451 AATTCAAATACGTGGAAGCATTCCACGTGAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126862 96 - 75711847 AATTCAAATACTGGGAAGCATTCCATGTGAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686251 96 - 18804593 AATTCAAATACTGGGAAGCATTCCATGTGAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297456 96 + 18905526 AATTCAAATACTGGGAAGCATTCCATGTGAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126759 96 - 72318688 AATCCAAATACTGGGAAGCATTCCATGTGAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462706 96 - 1517660 AATTCAAATACTGGGAAGCATTCCATGTGAATTGTTT-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558493 96 + 6513552 AATTCAAATACTGGGAAGCATTCCATGTGAATTGTTT-ATGTATTGAGCCAGAAGGCAAGCCTGGATGGCCTGATAGTGCTGCTTACTAGAGGGACA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339621 96 + 117903854 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTG-ATTTATTGAGCCAGAAGGCAAGCCTGGATGGTCCGATAGTGCTGCTTACTAGAGGGACA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516605 96 - 31320352 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTG-ATTTACTGAGCCAGAAGGCAAGCCTGGATGGTCTGATAGTGCTGCTTACTAGAGGGACA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718891 96 + 2203405 AATTCAAATACTGGGAAGCATTCCATGTTAATTGTTG-ATTTACTGAGCCAGAAGGCAAGCCTGGATGGTCTGATAGTGCTGCTTACTAGAGGGACA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666654 96 - 14941987 AATTCAAATACTGGGAAGCATTCCATGTTAATTTTTG-ATTTACTGAGCCAGAAGGCAAGTCTGGATGGTCTGATAGTGCTGCTTACTAGAGGGACA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41566248 95 + 83067054 AATTCAAATGCTGGGAACAATTCCATCTTAATTGTTTAATTTATTGAGCCAGGAGGCAAGCCTGGATGG--TGATAGTGCTTGTCATTAGGAGGACA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1314091 97 - 1406956 AATTCAAATGCTGGGAACCACTCCATCTTAATTGTTTAATTTATTGAGCCAGGAGGCAAGCCTGGATGGTCTGATAGTGCTTCTCATTAGGAGGACA i proCoq1.NW_012148742v1 I 4635 I 781 s otoGar3.GL873546 11283175 96 - 20685099 AATTCAAATGCTGGGAACTATTCCATCTTAATTGTTT-ATGTACTGAGCCAGGAGGCAAGCCTGTATGGTCTGATAGTGCTTCTCCTTAGGACAACA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111910057 93 + 195471971 AATTAAAAGGCCAAGAACCTTTTTATCT---TTGTGT-ACTTGCTGACCCATGAAGCAAGCCTGGATGGTTTGATAATATACCTCATTAGAGCAACA i mm10.chr1 C 0 C 0 s canFam3.chr1 112367297 96 - 122678785 GATTCCAGCACTGGAAATCATCCCATCTTAATTGTTT-ATTAGGTAAACCAGGAGGCAAACATGGATGATACGATAGTACTCTTCATTAGGGAGACA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 548053 95 - 2150887 AATTCAAATGCTGGGAACCATTCCATCTTAATGGTTT-ATTTATGGAGTCAGGGTGCAAGTGTGGATGGTTTGGTAGTCCTTC-CATTACAGGGACA i dasNov3.JH575754 C 0 C 0 a score=2022733.000000 s hg38.chr18_GL383571v1_alt 195930 142 + 198278 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTTTGATGTTCCCGCATCCT------GTGATGTTTATTTATTT--AATAAACAGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA s panTro5.chr18 65105596 142 + 78221452 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTTTGATGTTCCCTCATCCT------GTGATGTTTATTTATTT--AATAAACAGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224593 142 + 77229886 CAACCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTTTGATGTTCCCTCATCCT------GTGATGTTTATTTATTT--AATAAACAGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444075 142 + 17472758 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTTTGATGTTCCCACATCCT------GTGATGTTTATTTATTT--AATAAACAGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486042 142 - 152096393 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTTTGATGTTCCCGCATCCT------GTAATGTTTATTTATTT--AATAAACAGACCATGGGTTTGGAAACAAAATAATCTATACAGTAGAA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435646 142 + 70235451 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTCTGATGTTCCCGCATCCT------GTAATGTTTATTTGTTT--AACAAACCGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63126958 142 - 75711847 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTCTGATGTTCCCGCATCCT------GTAATGTTTATTTGTTT--AACAAACCGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686347 142 - 18804593 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTCTGATGTTCCCGCATCCT------GTAATGTTTATTTGTTT--AACAAACCGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297552 142 + 18905526 CAGCCCTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTCTGATGTTCCCGCATCCT------GTAATGTTTATTTGTTT--AATAAACCGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126855 142 - 72318688 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACAGGAAAGCTTA-TTTTATTCTGATGTTCCCACATCCT------GTAATGTTTATTTGTTT--AATAAACCGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462802 142 - 1517660 CAGCCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTGCAGGAAAGCTTA-TTTTATTCTGATGTTCCTGCATCCT------GTAATGTTTATTTGTTT--AATAAACCGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558589 142 + 6513552 CAGCCTTTC-C-AAAC-TCTTAATGCAATTTGCCCTGGGAACTATAGGAAAGCTTA-CTTTATTTTGATGTTCCCACATCCT------GTAATGTTTATTTGTTT--AATAAACTGACCATGGGTTTGGAAACAAAATAATCTATACAATAGAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339717 142 + 117903854 CAGGCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACTGGAAAGCTTA-TTTTATTTTGATGTTCCCATATCCT------GTAATGTTTATTTATTT--AATAAACAGACCATGGATTTGGAAACAAAATAATCTACACAATAGAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516701 142 - 31320352 CAGGCTTTC-C-AAAC-TTTTAATGAAATTTGCCTTTGGAACTACTGGAAAGCTTA-TTTTATTTTGATGTTCCCACATCCT------GTAATGTTTATTTATTT--AATAAACAGACCATGGATTTGGAAACAAAATAATCTATACAATAGAA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1718987 142 + 2203405 CAGGCTTTC-C-AAAC-TTTTAATGCAATTTGCCCTTGGAACTACTGGAAAGCTTA-TTTTATTTTGATGTTCCCACATCCT------GTAATGTTTATTTATTT--AATAAACAGACCATGGATTTGGAAACAAAATAGTCTATACAATAGAA i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666750 142 - 14941987 CAGGCTTTC-C-AAAC-TTTTAATGCAGTTTGCCCTTGGAACTACTGGAAAGCTTA-TTTTATTTTGGTGCTCCCACATCCT------GTAATGTTTATTTATTT--AATAAACAGACCATGGATTTGGAAACAAAATAATCTATACAATAGAA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41566343 133 + 83067054 TAGTGTTTCTC-AAAC-TTTTCATGTAATTTGCCCTTGGAACTGCTAGAAAGTTTA-TTTTATTTTGGTATTTCT----------------GTGCTTATTTATTT--AATAAACAGAACATGTATTTGGGAACAAAATAATCTACACAATAGAA i micMur3.chr19 C 0 I 838 s otoGar3.GL873546 11283271 143 - 20685099 TAGTGTTTCCC-AAAC-TTTTAATGGAATTTGCCCTTGGAACCACTAGAAAGTTTG-TTTTATTTTGGCATTTCCACAGACT------GCAATGTTTATTTATTT--AATAAACAGACACTGTGTTTGGGAACAAAATAGACTACACAATAGAA i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111910150 146 + 195471971 CAGCATTCC-CTGAAT-TTCTAATTTGGTTTGGGTTTGAAATTACTGGAAAATTTATTTTTACTTTTGAATTTCCTCATGCT------GTAATATTTACTTATTCCAAATGATTTTGTCCTATTCCTGGTAGCTAAATAATCCAAACAACAGAA i mm10.chr1 C 0 C 0 s canFam3.chr1 112367393 136 - 122678785 CTTTGCTTC-C-AAACATTTTAATGCAATCTGCCCTTAGAACTA--GCaatattta-tcttatttttatttttcggtttattaaataaataaattattattattt--aataaaCAGACTATTTATCTGTTAACAAGATATGCT----------- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 548148 140 - 2150887 CAGGATGTC-C-AAACATTTTAATGCAATTTGCCCTTGCAACTA--GCAAAGTTTA-TTTCATTTGGATGTTTCCACATCCT------GTAATGTTTGTTTATTT--AATAAACAGACCATTTATTTGGGAAC-AAACAAGCCACAGAATTAAT i dasNov3.JH575754 C 0 C 0 e proCoq1.NW_012148742v1 1314188 781 - 1406956 I a score=751058.000000 s hg38.chr18_GL383571v1_alt 196072 88 + 198278 CCCTCTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAAAA------------------------TAGCATTAACCAGAGAAGGATTTACGAATAG----AT s panTro5.chr18 65105738 89 + 78221452 CCCTCTGAACACA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAAAA-----------------------ATAGCATTAACCAGAGAAAGATTTATGAATAG----AT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224735 89 + 77229886 CCCTCTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAAAA-----------------------ATAGCATTAACCAGAGAAAGATTTATGAATAG----AT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444217 89 + 17472758 CCCTCTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAAAA-----------------------ATAGCATTAACCAGAGAAAGATTTACGAAGAG----AT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486184 90 - 152096393 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCAT-AAA--GGTGCTGAAAAAAA----------------------AATAGCATTAACCAGAGAAAGATTCACGAATAG----AT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435788 92 + 70235451 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAACA------------------------CAGCATTAACCAGAGAAAGATTCACGAATAGATTAAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127100 92 - 75711847 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAACA------------------------CAGCATTAACCAGAGAAAGATTCACGAATAGATTAAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686489 92 - 18804593 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAACA------------------------CAGCATTAACCAGAGAAAGATTCACGAATAGATTAAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297694 92 + 18905526 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAGACA------------------------CAGCATTAACCAGAGAAAGATTCACGAATAGATTAAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60126997 92 - 72318688 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAACA------------------------CAGCATTAAGCAGAGAAAGATTCACGAATAGATTAAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 462944 92 - 1517660 CCCTGTGAACATA----T----TTTGTGACTCTTCAGCCAC--AGCGT-AAA--AGTGCTGAAAAACA------------------------CAGCATTAACCAGAGAAAGATTCACGAATAGACTAAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558731 92 + 6513552 CCCTGTGAACATA----T----TTTATGACTCTTCAGCCAC--AGCGT-AAA--GGTGCTGAAAAACA------------------------CAGCATTAACCAGAGAAAGATTCACGAATAGATTAAT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339859 81 + 117903854 CCCTATGAACATA----T----TTTGTGACTCTTTGGCCAC--AGCATAAAA--GGAAATGAAAAA-A------------------------TAGCATTAACCACAGAAAGATTCACA----------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516843 80 - 31320352 CCCTGTGAATGTA----T----TTTGTGACTCTTTGGCCAC--AGCAT-AAA--GGAAGTGAAAAA-A------------------------CAGCATTAACCACAGAAAGAGTCACG----------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719129 79 + 2203405 CCCTGTGAACATA----T----TTTGTGACTTTTTGGCCAC--AGCAT-AAA--GGAACTGAAAAA-A------------------------TAGCA-TAACCACAGAAAGATTCACG----------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666892 80 - 14941987 CCCTGTGAACATA----T----TTTGTGACTCTTTGGCCAC--AGCAT-AAA--GGAACTGAAAAA-C------------------------TAGCATTAACCACAGAAAGATTCACA----------- i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11283414 108 - 20685099 ---TGCTAAGAC-----T----TCTGTGACTGGTCAGCCAT--AGTAT-GTA--GTTGTTGAACAAAAGTTGAAAAGCATTTTCATGTTGAAAAGCATTTATCAGAGAAATATTAATAATCAGAT---- i otoGar3.GL873546 C 0 I 523 s mm10.chr1 111910296 102 + 195471971 TTCAATATACATG----CCTTATTTGTGACTTTTCTACCAA--AACAT-AAT--TGGTTTAGGAAAAA---------------AAAGGGGGGTAGGCTTCCCCAAAGAAAGACTAAAGAACTTCAT--- i mm10.chr1 C 0 C 0 s canFam3.chr1 112367529 81 - 122678785 ----------------------TTTGTAACTCTTCA-CCAT--AGCAT-ATAGTAGTGAAGACAAAAA-------------------ATGGCTGGTTTTCACCAG---AAGATTAACTAACAGACAAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 548288 99 - 2150887 CACTGTGAACTTGCTTCT----TTTGTGAATCTTCAGCCATCAAACAT-AGT--AGGGAAAGACAAAA-------------------ATGTCCAATATTTACAGCAAGAAGAGTAACGAACAGAT---- i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41566476 838 + 83067054 I e proCoq1.NW_012148742v1 1314188 781 - 1406956 I a score=66594.000000 s hg38.chr18_GL383571v1_alt 196160 8 + 198278 ----AAATTCTG s panTro5.chr18 65105827 8 + 78221452 ----AAATTCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224824 8 + 77229886 ----AAATTCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444306 8 + 17472758 ----AAATTCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486274 8 - 152096393 ----TAATTCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435880 8 + 70235451 ----TAATTCCG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127192 8 - 75711847 ----TAATTCCG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686581 8 - 18804593 ----TAATTCCG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297786 8 + 18905526 ----TAATTCTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127089 8 - 72318688 ----TAATTCTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463036 8 - 1517660 ----TAATTCTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558823 8 + 6513552 ----TAATTCTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339940 7 + 117903854 -----AATTCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516923 7 - 31320352 -----AATTCTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719208 7 + 2203405 -----AATTCTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666972 7 - 14941987 -----AATTCTG i aotNan1.NW_018502140v1 C 0 C 0 s mm10.chr1 111910398 8 + 195471971 ----AAATTATG i mm10.chr1 C 0 C 0 s canFam3.chr1 112367610 8 - 122678785 ----AAATTATG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 548387 12 - 2150887 CAATCAATTATG i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41566476 838 + 83067054 I e proCoq1.NW_012148742v1 1314188 781 - 1406956 I e otoGar3.GL873546 11283522 523 - 20685099 I a score=178127.000000 s hg38.chr18_GL383571v1_alt 196168 14 + 198278 ATATTATTAATAGT s panTro5.chr18 65105835 14 + 78221452 ATATTATTAATAGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224832 14 + 77229886 ATATTATTAATAGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444314 14 + 17472758 ATATTATTAATAGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486282 14 - 152096393 ATATTGTTAATAGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435888 14 + 70235451 ACATTGTTAATAGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127200 14 - 75711847 ACATTGTTAACAGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686589 14 - 18804593 ACATTGTTAATAGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297794 14 + 18905526 ACATTGTTAATAGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127097 14 - 72318688 ACATTGTTAATAGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463044 14 - 1517660 ACATTGTTAATAGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558831 14 + 6513552 ACATTGTTAATAGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339947 14 + 117903854 ATATTGTTAATGGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516930 14 - 31320352 ATACTGTTAATGGT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719215 14 + 2203405 ATACTGTTAATGGT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666979 14 - 14941987 ATATTGTTAATGGT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11284045 14 - 20685099 ATCTTGGTAATGTT i otoGar3.GL873546 I 523 I 2 s mm10.chr1 111910406 14 + 195471971 ATCTTGTTAATAGC i mm10.chr1 C 0 I 2 s canFam3.chr1 112367618 14 - 122678785 ATCTTATTAGTAGT i canFam3.chr1 C 0 I 2 s dasNov3.JH575754 548399 14 - 2150887 ATCCTATTAATAGC i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41566476 838 + 83067054 I e proCoq1.NW_012148742v1 1314188 781 - 1406956 I a score=1426822.000000 s hg38.chr18_GL383571v1_alt 196182 114 + 198278 --TGTTATAAAGAATAA------------------------------TTTTAATTTATTTTGAAGAGACATCTCTACATCTTGTATAAAATTAAT----GGCTGTTTCAATATCAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- s panTro5.chr18 65105849 114 + 78221452 --TGTTATAAAGAATAA------------------------------TTTTAATTTATTTTGAAGAGACATCTCTACATCTTGTATAAAATTAAT----GGCTGTTTCAATATCAGATGTCTATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224846 114 + 77229886 --TGTTATAAAGAATAA------------------------------TTTTAATTTATTTTGAAGAGACATCTCTACATCTTGTATAAAATTAAT----GGCTGTTTCAATATCAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444328 114 + 17472758 --TGTTATAAAGAATAA------------------------------TTTTAATTTATTTTGAAGAGACATCTCTACATCTTGCATAAAATTAAT----GGCTGTTTCAATATCAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486296 118 - 152096393 --TGTTATAAAGAATAG------------------------------TTTTAATTTATTTTGAAGAGACATCTCTACATCTTTTGTAATATTAAT----GGCTGTTTCAATATCCGATGTATATTT----GGATTTGCAGGT----C------ATCTTATTTAAATTA---------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57435902 114 + 70235451 --TGTTATAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTTCAATATGAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127214 114 - 75711847 --TGTTATAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTTCAATATGAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686603 114 - 18804593 --TGTTATAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTTCAATATGAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297808 114 + 18905526 --TGCTATAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTTCAATATGGGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127111 114 - 72318688 --TGTTACAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTCCATCTTTTATAATATTAAT----GGCTGTTTCAATATGAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463058 114 - 1517660 --TGTTATAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTTCAATATGAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558845 114 + 6513552 --TGTTATAAAGAATAA------------------------------TTTTAGTTTATTTTGAAGTGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTTCAATATGAGATGTATATTT----GGATTTGCAGGT----C------ATC----TTAAATTA---------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105339961 148 + 117903854 --TTTTATAAAGAATAATTTTAATTTGTTGGTTGTTATAAAGAATACTTTTAATTTATTTTGATAAGACATCTCTACATCTTTTATAATACTAGT----GGCTGTTAGAATATCAGATGCATATTT----GGATTTACAGGT----C------TTTTTACTTAAATTA---------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19516944 148 - 31320352 --TGttataaagaataattttaatttattggttgttataaagaataattttaatttattttGATAAGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTACAATATCAGATGCATATTT----GGATTTGCAGGT----C------TTCTTACTTAAATTA---------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719229 148 + 2203405 --TGTTATAAAGAATAATTTTAATTTATTGGTTGTTATAAACAATAATTTTAGTTTATTTTGATAAGACATCTCTACATCTTTTATAATATTAAT----GGCTGTTACAATATCAGATGCATATTT----GGGTTTGTAGGT----C------TTCTTACTTAAATTA---------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3666993 147 - 14941987 --TGTTATAAAGAACAATTTTAATTTATTGGTTGTTATAAAGAATAATTTTAATTTATTTTGATAAGACATCTCTACATCTTTTGTAATATTAAT----GGCT-TTACAATATCAGATGAATATTT----GGATTTGCAGGT----C------TTCTTACTTAAATTA---------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1314969 117 - 1406956 --TGTTGTAAAGAATAA------------------------------TTTTAATTTATTTTGAAGAGACAATTCTACATCTTTTATAACATTAAT----GGCTGCTTC-ATTTCAGATGTTTATTT----AGTTTTGCAGGTCCTGC------ATC----TTATATTA---------- i proCoq1.NW_012148742v1 I 781 I 23 s otoGar3.GL873546 11284061 113 - 20685099 --CGTCTTAAAGAATAA------------------------------TTTTAATTT-TTTTGAAGAGACTATTCTACATCTTTTGTAATATTAAT----AGTTGCTTCAATGTCAGA----AATTT----AGTTTTGTATGTACTGC------ATC----TTATTTAA---------- i otoGar3.GL873546 I 2 I 4 s mm10.chr1 111910422 126 + 195471971 --TCTTGTATAGGATAA------------------------------TTTTAAATCAGTTTAATGAGGGATTTATTAGTGTTTTACCACATTATTCCTGGGCTGCTTCAATGTCTGATACATATTT----AGATTTGGTGGT----C--TTAGATCTTATTTAAATGT---------- i mm10.chr1 I 2 C 0 s canFam3.chr1 112367634 105 - 122678785 --TGTTGCAAAGAATAA------------------------------TTCTAACTTATTTTGAAGG--------TATATCTTTTATAACATTAAT----AGCTATTTCAATGTCAGATGTATATTT----GGATTTTCAGGTCTCGC------ATT----TTA--------------- i canFam3.chr1 I 2 I 6 s dasNov3.JH575754 548413 136 - 2150887 TCTGCTGTAAAGAATAA------------------------------CTTTAACTTATTTTGAAAAGAAAATGCCACATCTCCTATAATGCTAAC----GCTTACTTTAATGGCAGGTGTACATTTTTCAGGTTTTTCGGGT----TTCTCAGGTC----TTGCATTTACTGACATGT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41566476 838 + 83067054 I a score=149797.000000 s hg38.chr18_GL383571v1_alt 196296 13 + 198278 TTTTTTAGACTCA s panTro5.chr18 65105963 13 + 78221452 TTTTTTAGACTCA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224960 13 + 77229886 TTTTTTAGACTCA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444442 13 + 17472758 TTTTTTAGACTCA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486414 13 - 152096393 TTTATTAGACTCA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436016 13 + 70235451 TTTATTAGACTCA i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127328 13 - 75711847 TTTATTAGACTCA i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686717 13 - 18804593 TTTATTAGACTCA i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297922 13 + 18905526 TTTATTAGACTCA i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127225 13 - 72318688 TTTATTAGACTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463172 13 - 1517660 TTTATTAGACTCA i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558959 13 + 6513552 TTTATTAGACTCA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340109 13 + 117903854 CTTATTAGACTCA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517092 13 - 31320352 CTTATTAGACTCA i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719377 13 + 2203405 CTTATTAGACTCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667140 13 - 14941987 CTAATTAGACTCA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11284178 13 - 20685099 TGTATTAGAATAA i otoGar3.GL873546 I 4 I 1 s mm10.chr1 111910548 11 + 195471971 ATTATTAGCAT-- i mm10.chr1 C 0 C 0 s canFam3.chr1 112367745 13 - 122678785 TGTCTTAGAATCA i canFam3.chr1 I 6 I 1 s dasNov3.JH575754 548549 13 - 2150887 CTTATTAGAATCA i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41566476 838 + 83067054 I e proCoq1.NW_012148742v1 1315086 23 - 1406956 I a score=740001.000000 s hg38.chr18_GL383571v1_alt 196309 56 + 198278 CATTATATTTCTATTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT s panTro5.chr18 65105976 56 + 78221452 CATTATATTTCTATTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64224973 56 + 77229886 CATTATATTTCTATTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444455 56 + 17472758 CATTATATTTCTATTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486427 56 - 152096393 CATTATATTTCTATTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436029 56 + 70235451 CATTATATTTCTATTTA------TTGGTT--------------CAGGAAAAAGTTTATCAAATTAGTGTTCTATAT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127341 56 - 75711847 CATTATATTTCTATTTA------TTGGTT--------------CAGGAAAAAGTTTATCAAATTAGTGTTCTATAT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686730 56 - 18804593 CATTATATTTCTATTTA------TTGGTT--------------CAGGAAAAAGTTTATCAAATTAGTGTTCTATAT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297935 56 + 18905526 CATTATATTTCTATTTA------TTGGTT--------------CAGGAAAAAGTTTATCAAATTAGTGTTCTATAT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127238 56 - 72318688 CATTATATTTCTATTTA------TTGGTT--------------CAGGAAAAAGTTTATCAAATTAGTGTTCTATAT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463185 56 - 1517660 CATTATATTTCTATTTA------TTGGTT--------------CAGGAAAAAGTTTATCAAATTAGTGTTCTATAT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3558972 56 + 6513552 CATTATATTTCTGTTTA------TTGGTT--------------CAGGAAAAAGTATATCAAATTAGTGTTCTATAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340122 56 + 117903854 TGTTATATTTCTACTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517105 56 - 31320352 TGTTATATCTCTACTTG------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTCTATAT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719390 56 + 2203405 TGTTATATTTCTACTTG------TTGGTT--------------CATGAAAAAATTTATCAAATTAGTGTTCTATAT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667153 56 - 14941987 TGTTATATTTGTACTTA------TTGGTT--------------CATGAAAAAGTTTATCAAATTAGTGTTGTATAT i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1315109 56 - 1406956 CATTATAAGTCCACTTA------CTGGTT--------------CATGAAAAAATTCCTTGAATTCATGTTCTTCAT i proCoq1.NW_012148742v1 I 23 C 0 s otoGar3.GL873546 11284192 55 - 20685099 CATT-TCTATCTACTTA------CTGGTT--------------CATAAAAATATTCCTCAATTCCATTTTCTATAT i otoGar3.GL873546 I 1 C 0 s mm10.chr1 111910559 55 + 195471971 CATTGAAGTTC-ACTTA------CTGAAT--------------AATGAAAACATTGTTCATATTTATATTTTATCT i mm10.chr1 C 0 C 0 s canFam3.chr1 112367759 70 - 122678785 CATTTTATCGCTACTTA------TTCCTTCACACATATACACACACACACAAATTTTTAAAGTTAGTGTTCTATAT i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 548562 59 - 2150887 --TTATATTTCTATTCCTCTACTTTTTTT--------------CACAAGAAAGTCC-TCAAATTAGTATTCTACAT i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41566476 838 + 83067054 I a score=1109144.000000 s hg38.chr18_GL383571v1_alt 196365 84 + 198278 CCCCTGCCTCTGTT---TTTCCCATGCATGC-ATTAACACTTTGAAATATAGATTTATCTTCCAACACTTTAGTAAAATAGCTCTGTT s panTro5.chr18 65106032 84 + 78221452 CCCCTGCCTCTGTT---TTTCCCATGCATGC-ATTAACACTTTGAAATATAGATTTATCTTCCAACACTTTAGTAAAATAGCTCTGTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225029 84 + 77229886 CCCCTGCCTCTGTT---TTTCCCATGCATGC-ATTAACACTTTGAAATATAGATTTATCTTCCAACACTTTAGTAAAATAGCTCTGTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444511 83 + 17472758 -CCCTGCCTCTGTT---TTTCCCATGCGTGC-ATTAACACTTTGAAATATAGATTTATCTTCCAACACTTTAGTAAAATAGCTCTGTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486483 84 - 152096393 CCCCTGCCTCTGTT---TTTCCCATGCATGC-ATTAACACTTTGAAGTATAGATTTATCTTCACACTTCACACTAAAATGGCTCTGTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436085 80 + 70235451 CCCCTGCCTCTGTT---TTTCCCA----TGC-ATTAACACTTTGAAATATAGATTTATCTTCAAACACTTTAGTCAAATGGCTCTGTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127397 80 - 75711847 CCCCTGCCTCTGTT---TTTCCCA----TGC-ATTAACACTTTGAAATATAGATTTATCTTCAAACACTTTAGTCAAATGGCTCTGTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686786 80 - 18804593 CCCCTGCCTCTGTT---TTTCCCA----TGC-ATTAACACTTTGAAATATAGATTTATCTTCAAACACTTTAGTCAAATGGCTCTGTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13297991 80 + 18905526 CCCCTGCCTCTGTT---TTTCCCA----TGC-ATTAACACTTTGAAATATAGACTTATCTTCAAACACTTTAGTCAAATGGCTCTGTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127294 80 - 72318688 CCCCTGCCTCTGTT---TTTCCCA----TGC-ATTAACACTTTGAAATATAGATTTATCTTCAAACACTTTAGTCAAATGGCTCTGTT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463241 80 - 1517660 CCCCTGCCTCTGTT---TTTCCCA----TGC-ATTAACACTTTGAAATATAGATTTATCTTCAAACACTTTAGTCAAATGGCTCTGTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559028 80 + 6513552 CCCCTGCCTCTGTT---TTTCCCA----CGC-ATTAACACTTTGAAATATAGATTTATTTTCAAACACTTTAGTCAAATGGCTCTGTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340178 82 + 117903854 CACCTGCCTCTGTT---TTTCCCACTAATGC---TAACGCTGTGATATATAAATTTATCTTCCAAAACTTTAGTAAAATGTCTCTGTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517161 84 - 31320352 CCCCTGCCTCTGTT---TTTCCCACTAATGC-GTTAATCCTTTGAAATATAGATTTATCTTTCAAAACTTTAGTAAAATGTCTCTGTT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719446 84 + 2203405 CCCCTGCCTCTGTT---TTTCCCACTAATGC-ATTAACCCTTTGAAATATAGATTTATCTTCCAAAACTGTAGTAAAATGTCTCTGTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667209 84 - 14941987 CCCCTGCCTCTGTT---TTCCCCACTAATTC-ATTAACCCTTTGAAATATAGATTTATCTTCCAAAACTTTAGTAAAATGTCTCTGTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567314 84 + 83067054 CCCCAGCCTCTGTT---TTCCCCACCCATAT-ATTAAACCTTTGATATACAGATTTATCTTGTAACACTTAAATAAAATGGCTCTGTT i micMur3.chr19 I 838 C 0 s proCoq1.NW_012148742v1 1315165 84 - 1406956 CCCCAGCTTCTGTT---TTCCCCACCCATAT-AGTAAACCTTTGATATACAGATTTATCTTGTAACACTTAAGTAATATGGCTCTGCT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11284247 81 - 20685099 TTCCAGCCTCTGTT---TTTC---CCCATAC-AGTAAACTCTTGCTATGCAGGTTTATCTTCTAATACTTAAGGAAAACGGTTCTGTT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111910614 77 + 195471971 ATCATGCATATACT---TTCACAATCAAGGA-TTTGAATATTTGAAATATAAAAAAATCATCAAACAAT-------AATAGCATTGTT i mm10.chr1 C 0 I 3405 s canFam3.chr1 112367829 84 - 122678785 CCACTGACTAT-TT---TTCCCCATCCATGCAAGTAAGCCTTTGAAATATAAATTTATCTTCCAACAGTCTTGTAAAATGGTTCTGTT i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 548621 87 - 2150887 CGACTGCTTCTATTAAGCACCCAGCCCATGT-ATTAAGCACTTGATATATAGACTTATCTTCCAACCCTTTAGTAAAATGGCTCTGCT i dasNov3.JH575754 C 0 I 1 a score=1585912.000000 s hg38.chr18_GL383571v1_alt 196449 123 + 198278 TGTTAAAGTCAGCCATTTAAATTAT--TGTG---TTTTTTG---GGTAAGTTATGAGGCTAACTCTCCCTGATTTTATTCTATTTATCCTCTTATTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C s panTro5.chr18 65106116 123 + 78221452 TGTTAAAGTCAGCCATTTAAATTAT--TGTG---TTTTTTG---GGTAAGTTATGAGGCTAACTCTCCCTGATTTTATTCTATTTATCCTCTTATTGCTTTTTCATTTGTTGATACTGGTTTATTTTCTT-C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225113 123 + 77229886 TGTTAAAGTCAGCCATTTAAATTAT--TGTG---TTTTTTG---GGTAAGTTATGAGGCTAACTCTCCCTGATTTTATTCTATTTATCCTCTTATTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444594 121 + 17472758 TGTTAAAGTCAGCCATTTAAATTAT--TGTG---TTTTTTG---GGTAA--TATGAGGCTAACTCTCCCTGATTTTATTCTATTTATCCTCTTATTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486567 121 - 152096393 TCTTAAAGTCAGCCATTTAAATTAT--TGTG---ATTTTTG---GGTAA--TGTGAGGCTAACTCTCCCTGATTTTATTCTATTTCTCCTCTTATTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436165 121 + 70235451 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---TGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTATTTATCCTCTGACTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127477 121 - 75711847 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---TGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTATTTATCCTCTGACTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686866 121 - 18804593 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---TGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTATTTATCCTTTGACTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298071 121 + 18905526 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---TGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTGTTTATCCTCTGACTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127374 121 - 72318688 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---TGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTATTTATCCTCTGATTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463321 121 - 1517660 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---TGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTATTTATCCTCTGACTACTTTTTGATTTGTTGATACTGGTTTATTTTCTT-C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559108 121 + 6513552 TGTTAAAGTCAACCATTTAAATTAT--TGTG---TTTTTTG---GGTAA--TATGAGGCTAACTCTCCCTGAAATTATTCTATTTATCCTCTGACTACTTTTTGATTTGTTGATATTGGTTTATTTTCTT-C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340260 124 + 117903854 TGTTGAAGTCAGCCATTTAAATTAT--TGTA---TTTTGGGGG-GGTAA--TATGAGGTTAACTCTCCCTGATCTCATTCTATTTATCCTCTTGTTACTTTTTGATTTCTTGATATTCATTTATTTTCTTCC i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517245 123 - 31320352 TGTTGAAGTCAGCCATTTAAAGTAT--TGTA---ATTTTGGGG-GGTAA--TATGAGGCTAACTCTCCCTGATCTCATTCTATTTAT-CTCTTGTTACTTTTTGATTTTTTGATATTGGTTTATTTTCTTCC i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719530 124 + 2203405 TGTTGAAGTCAGCCATTTAAATTAT--GGTA---TTTTGGGGT-GGTAA--TATGAGGCTAACTCTCCCTGATCTCATTCTATTTATCCTCTTGTTACTTTTTGATTTCTTGATATTGGTTTATTTTCTTCC i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667293 125 - 14941987 TGTTGAAGTCAGCCATTTAAAATAT--TGTA---TTTTTGGGGAGGTAA--TATGAGGTTAACTCTCCCTGATCTCATTCTATTTATCCTCTTGTTACTTTTTGATTTCTTGATACTGGTTTATTTTCTTCC i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567398 120 + 83067054 TATTAAAGTACGTTATTTAAATTAT--T-TC---TTTTTTG---GGTAA--TATGAGCCTGACTCTCCATGATCTTGTCCTGTCTATCCTCCTATTACTTCTTGATTTATTGATGTTGGTTTATTTTCTT-C i micMur3.chr19 C 0 I 30 s proCoq1.NW_012148742v1 1315249 120 - 1406956 TATTAAAGTAAGTTATTTAAATTCT--T-TC---TTTTTTG---GGTAA--TATGAGCCTGATTCTCCATGATCTTGTCCTATCCATCCTCCTATTACTTCTTGATTTATCGATGTTGGTTTATTTTCTT-C i proCoq1.NW_012148742v1 C 0 I 1 s otoGar3.GL873546 11284328 103 - 20685099 TATT-ATGTTAGTTACTTAAATTCT--G-TC---TTTCTTG---GGTAA--TAAGAGCCTAGCTCCCTATGATGTTGTCCTAGCTA----------------TGATTTCTTGACACTGGTTTATTTTCTT-C i otoGar3.GL873546 C 0 I 1 s canFam3.chr1 112367914 119 - 122678785 TATTAAATTAAGTCATTTAAATTCTCCTGTC---TTTCTTG---GGTAA--TGTGAAATAATCTCTCCCTGATTTTGCCCTATCT----TCCTATTACTTTTTGATTTCTTGATGTTGGCATATTTACTC-C i canFam3.chr1 I 1 I 1 s dasNov3.JH575754 548709 124 - 2150887 TATTTAATTGCATCTTTTAAATTCT--CCTGCCTTCTCTTG---GATAA--TAGGAGGCCACCTCTCCCTGGTCTTGTCCTCTCTTTCCTATTACCTTCCTCTTTTTTTTTGATCTTGGTTTATTTTCTT-C i dasNov3.JH575754 I 1 I 1 e mm10.chr1 111910691 3405 + 195471971 I a score=343842.000000 s hg38.chr18_GL383571v1_alt 196572 25 + 198278 TCATGTTCTCAAAATGAGAGGCAAC-------- s panTro5.chr18 65106239 25 + 78221452 TCATGTTCTCAAAATGAGAGGCAAC-------- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225236 25 + 77229886 TCATGTTCTCAAAATGAGAGGCAAC-------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444715 25 + 17472758 TCATGTTCTCAAAATAAGAGGCAAC-------- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486688 25 - 152096393 TCATGTTCTCAAAATGAGAGGCAAC-------- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436286 25 + 70235451 TCATGTTCTCAAAATGAGAGGCAAC-------- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127598 25 - 75711847 TCATGTTCTCAAAATGAGAGGCAAC-------- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13686987 25 - 18804593 TCATGTTCTCAAAATGAGAGGCAAC-------- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298192 25 + 18905526 TCATGTTCTCAAAATGAGAGGCAAC-------- i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127495 25 - 72318688 TCATGTTCTCAAAATGACAGGCAAC-------- i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463442 25 - 1517660 TCATGTTCTCAAAATGAGAGGCAAC-------- i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559229 25 + 6513552 TCATGTTCTCAAAATGAGAGGCAAC-------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340384 25 + 117903854 TCATGTTCTCAAAATTAGAGGCAAC-------- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517368 25 - 31320352 TCCTGTTCTCAAAATTAGAGGCAAC-------- i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719654 25 + 2203405 TCATGTTCTCAAAATTAGAGGCAAC-------- i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667418 25 - 14941987 TCATGTTCTCAAAATTAGAGGCAAC-------- i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1315370 25 - 1406956 TCTTGTTTTCAAAATTAGGGTCAAA-------- i proCoq1.NW_012148742v1 I 1 I 4 s otoGar3.GL873546 11284432 25 - 20685099 TCTTCTTGTCAAAATTAGAGTCAAA-------- i otoGar3.GL873546 I 1 I 8 s canFam3.chr1 112368034 25 - 122678785 TCTTGTTCTCAAAATCAGTGTCAAA-------- i canFam3.chr1 I 1 I 8 s dasNov3.JH575754 548834 33 - 2150887 TTATGTTTTCAAAATCAGGGTCAAAAAGGAGAC i dasNov3.JH575754 I 1 C 0 e micMur3.chr19 41567518 30 + 83067054 I e mm10.chr1 111910691 3405 + 195471971 I a score=522854.000000 s hg38.chr18_GL383571v1_alt 196597 36 + 198278 TCACCAATTG-TTTTCTAACATGAAAATTAACATTTT s panTro5.chr18 65106264 36 + 78221452 TCACCAATTG-TTTTCTAACATGAAAATTAACATTTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225261 36 + 77229886 TCACCAATTG-TTTTCTAACATGAAAATTAACATTTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444740 36 + 17472758 TCACCAATTG-TTTTCTAACATGAAAATTCACATTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486713 36 - 152096393 TCACCAAGTA-TTTTCTAACATGAAAATTAACATTTT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436311 36 + 70235451 TCACCAATTA-TTTTCTAACATAAAAATTAATATTTT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127623 36 - 75711847 TCACCAATTA-TTTTCTAACATAAAAATTAACATTTT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687012 36 - 18804593 TCACCAATTA-TTTTCTAACATAAAAATTAACATTTT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298217 36 + 18905526 TCACCAATTA-TTTTCCAACGTAAAAATTAACATTTT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127520 36 - 72318688 TCACCAATTA-TTTTCTAACATAAAAATTAACATTTA i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463467 36 - 1517660 TCACCAATTA-TTTTCTAACATAAAAATTAACATTTT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559254 36 + 6513552 TCATCAATTA-TTTTCTAACATAAAAATTAACATTTT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340409 36 + 117903854 TCACCAATTA-TTTTCTAACATAAACATTAACATTTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517393 36 - 31320352 TCACCaatta-ttttctaaaataaacaataacatttt i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719679 36 + 2203405 TCACCAATTA-TTTTCTCACATAAACAATAACATTTT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667443 36 - 14941987 TCACCAATTA-TTTTCTAACATAAACATTAACATTTT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567548 36 + 83067054 TGATTCACTA-TTTTCTAACAtaaaatttaacatttt i micMur3.chr19 I 30 C 0 s proCoq1.NW_012148742v1 1315399 36 - 1406956 TGACTCATTA-TTTTCTAACATAAAATTTAACATTTT i proCoq1.NW_012148742v1 I 4 C 0 s otoGar3.GL873546 11284465 33 - 20685099 ----TTACTATTTTTCCAACataaaaaataacattta i otoGar3.GL873546 I 8 I 114 s canFam3.chr1 112368067 36 - 122678785 TAACCAATTA-TTTTCTAACATACAATGTAACGTTTC i canFam3.chr1 I 8 C 0 s dasNov3.JH575754 548867 36 - 2150887 TCACCAATTA-TTTTCTAACATAACATACAACATTTC i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111910691 3405 + 195471971 I a score=306138.000000 s hg38.chr18_GL383571v1_alt 196633 25 + 198278 AAAAATTCATTTCATAATACATCAT s panTro5.chr18 65106300 25 + 78221452 AAAAATTCATTTAATAATACATCAT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225297 25 + 77229886 AAAAATTCATTTAATAATACATCAT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444776 25 + 17472758 AAAAATTCATTTCATAATACATCAT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486749 25 - 152096393 AAAAATTCATTTCATAATACATCGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436347 24 + 70235451 -AAAATTCATTTCATAATACATCGT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127659 24 - 75711847 -AAAATTCATTTCATAATACATCGT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687048 24 - 18804593 -AAAATTCATTTCATAATACATCGT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298253 24 + 18905526 -AAAATTCATTTCATAATACATCGT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127556 24 - 72318688 -AAAATTCATTTCATAATACATCGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463503 24 - 1517660 -AAAATTCATTTCATAATACATCGT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559290 24 + 6513552 -AAAATTCATTTCATAATACATCGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340445 20 + 117903854 AAAAATTCATTT-----TACATCCT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517429 20 - 31320352 aaaaatttattt-----taCATCCT i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719715 20 + 2203405 AAAAATTCATTT-----TACATCCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667479 20 - 14941987 AAAAATTCATTT-----TACATCCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567584 25 + 83067054 aaaaattaattttataatataTCCT i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1315435 25 - 1406956 AAAAATTAATTTTATAATATATTCT i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11284612 24 - 20685099 aaaaattcattttat-atatatCCT i otoGar3.GL873546 I 114 C 0 s canFam3.chr1 112368103 25 - 122678785 TAAAATTTAATTCATAATACATTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 548903 24 - 2150887 -AAATTTTAATTCAAAATACATCCT i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111910691 3405 + 195471971 I a score=2115219.000000 s hg38.chr18_GL383571v1_alt 196658 141 + 198278 ACTAAATGCCATTTCATTCCAATTTTTCAATAAAAACATTTCAATCCTGGAATTGCACACTACAACAAAGTAGATATAAGATGATTAAATTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG s panTro5.chr18 65106325 141 + 78221452 ACTAAATGCCATTTCATTCCAATTTTTCAATAAAAACATTTCAATCCTGGAATTGCACACTACAACAAAGTAGATATAAGATGATTAAACTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225322 141 + 77229886 ACTAAATGCCATTTCATTCCAATTTTTCAATAAAAACATTTCAATCCTGGAATCGCACACTACAACAAAGTAGATATAAGATGATTAAACTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444801 141 + 17472758 ACTAAATGCCATTTCATTCCAATTTTTCAATAAAAACATTTCAATCCTGGAATTGCACACTACAACAAAGTAGATATAAGATGATTAAATTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486774 141 - 152096393 ACTAAATGCCATTTCATTCCAATTTTTCAGTAAAAACATTTCAATCCTGGAATCGCACACTACCACAAAGTAGATATAAGATGATTAAATTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436371 141 + 70235451 ACTAAATGCCATTTCATTCCAATTTTTCAATTAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAGATGATTAAATTATGAAA-TCCTAGTGGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127683 141 - 75711847 ACTAAATGCCATTTCATTCCAATTTTTCAATTAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAGATGATTAAATTATGAAA-TCCTAGTGGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687072 141 - 18804593 ACTAAATGCCATTTCATTCCAATTTTTCAATTAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAGATGATTAAATTATGAAA-TCCTAGTGGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298277 141 + 18905526 ACTAAATGCCATTTCATTCCAATTTTTCAATAAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAGATGATTAAATTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127580 141 - 72318688 ACTAAATGCCATTTCATTCCAATTTTTCAATAAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAGATGATTAAATTATGAAA-TCCTAGTAACTGCAGGCAATGGTGGAGGGGCAATGAGCAATTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463527 141 - 1517660 ACTAAATGCCATTTCATTCCAATTTTTCAGTAAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAGATGATGAAATTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559314 141 + 6513552 ACTAAAAACCATTTCATTCCAATTTTTCAATAAAAAAATTTCAATCCTGGAATCGCACACTACCACAAAATAGATATAAAGTGATTAAATTATGAAA-TCCTAGTAGCTGCAGGCAAGGGTGGAGGGGCAATGAGCAATTCG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340465 140 + 117903854 ACTAAATGTTATTTTATTCAAATTTTTCAATAAAAAAGTTTCATTCCTGGAATTGCATGCCACC-CGAAGTAGATATAAAATGATTAAATTATGAAA-TCCTAATACCTGCAGGCAAGGGGGAAAGGGGAAAGAGGAATTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517449 140 - 31320352 ATTAAATGTTATTTCATTCAAATTTTTCAATAAAAAAGTTTCATTCTTGGAATTGCACACTACC-CAAAGCAGATATAAGATGATTAAACTATGAAA-TCCTAATACCTGCAGGCAAGGGGGGAAGGACAAAGAGGAATTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719735 140 + 2203405 ACTAAATGTTATTTCATTCAAATTTGTCAATAAAAAAGTTTCATTCCCAGAGTTGCACGCTACC-CAAAGTAGCTGTAAGACGATTAAATTATGAAA-TCCTAATACCAGCAGGCAAAGGGGGAAGGACAAAGAGAAATTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667499 140 - 14941987 ACTAAATGTTATTTCATTCAAATTTTTCAATAAAAAAGTTTCATTCCTGGAATTGCACACTACC-CAAAGTAGATATAAGATGGTTAAATTATGAAA-TCCTAATACCTGCAGGCAAGGGGGGAAGGGGAAAGAGGAATTTG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567609 141 + 83067054 ACCAAATGCCGTTTTATTGTGCTTTTTCAATAAAGATGTTTCAATCTTAGAGTTGAACACTACTACAAAGTGGATATAAAATGATTCAGTTATAAAA-TCCTGGTAGCTGCAGGCAAGGATGGAGGGGAAATGAGTGATTTG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1315460 141 - 1406956 ACCAAATGCCATTTTATTGTGATTTTCCAATAAAGATGTTTCAATCTTAGAGTTGAACACTACCACAAAGTGGATATAAAATGATTCAGTTATAAAA-TCCTGGTAGCTGCAGGCAAGGATGGAGGGGAAATGAGTGGTTTG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11284636 129 - 20685099 ACCAAATGTCATTTTACTATGATTTTTTAATAAGGAAGTTTCAATCCTGGAATTGAACACTACCAC------------AAATGATTCAATTATGAAA-TTCTGGTAGCTGCAGGCAAGGGTGGAGGGGGAATGAGTGACTTG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111914096 141 + 195471971 actaaactaccaatcaTTACACTTTTTCAAGGGAGTTGTTTCTCTTCCAGAATTGCACACTGCCACAAAGAATATGTAGAATGATTCAGTTATAAAAGGACTGGTGCTTATTCAC-AGGGTGGATTGAAAAAGAGCAATTTG i mm10.chr1 I 3405 I 391 s canFam3.chr1 112368128 139 - 122678785 ACCAACTGCCACATCTTTCCAGTTTTTCAGTAAAATAGATTCAATCCAAGAATT--ACACTAGCACAAAATGCATACAAAACGATTAAACAATAAAT-TCCCAGTAGCTTCAGGCAAGGATGGAGGGGGAATGAGCCATTTG i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 548927 135 - 2150887 ACCAAATGCCATCCCTTTCAAATTTTTCAGTAAAGTTGGATCAATCCGGGAATTGCACACTTTCACAAAGTAGATATAA-ATGATTAAATAATAAAA-TCCCATTAAGTGCAGGCAAGGG-----GAGGAGTGAACAGTTCA i dasNov3.JH575754 C 0 C 0 a score=-6465.000000 s hg38.chr18_GL383571v1_alt 196799 1 + 198278 -T s panTro5.chr18 65106466 1 + 78221452 -C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225463 1 + 77229886 -C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444942 1 + 17472758 -T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486915 1 - 152096393 -T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436512 1 + 70235451 -T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127824 1 - 75711847 -T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687213 1 - 18804593 -T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298418 1 + 18905526 -T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127721 1 - 72318688 -T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463668 1 - 1517660 -T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559455 1 + 6513552 -T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340605 1 + 117903854 -T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517589 1 - 31320352 -T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719875 1 + 2203405 -T i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667639 1 - 14941987 -T i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567750 1 + 83067054 -G i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1315601 1 - 1406956 -G i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11284765 1 - 20685099 -G i otoGar3.GL873546 C 0 C 0 s dasNov3.JH575754 549062 1 - 2150887 G- i dasNov3.JH575754 C 0 C 0 e mm10.chr1 111914237 391 + 195471971 I e canFam3.chr1 112368267 1 - 122678785 I a score=4846435.000000 s hg38.chr18_GL383571v1_alt 196800 289 + 198278 ATATGCAGGAAGTAATCAAGAGTACATGGATTTCTGCTCAGTGCAGTATCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACCGAACCAAAGACAGTAAACAATGCAACAAAAC--AGAGAGGTATTTAGGAAGATGACAGACTGCTGAAGAAGATGCAGAGCAGAAATGTGAGCCATACTGCAAGCACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGTCAG s panTro5.chr18 65106467 289 + 78221452 ATATGCAGGAAGTAATCAAGAGTACATGGATTTCTGCTCAGTGCAGTATCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACCGAACCAAAGACAGTAAACAATGCAACAAAAC--AGAGAGGTATTTAGGAAGATGACAGACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCATACTGCAAGCACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGTCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225464 289 + 77229886 ATATGCAGGAAGTAATCAAGAGTACATGGATTTCTGCTCAGTGCAGTATCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACCGAACCAAAGACAGTAAACAATGCAACAAAAC--AGAGAGGTATTTAGGAAGATGACAGACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCATACTGCAAGCACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGTCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5444943 289 + 17472758 ATATGTAGGAAGTAATCAAGAGTACATGGATTTCTGCTCAGTGCAGTATCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACCGAACCAAAGACAGTAAACAATGCAACAAAAC--AGAGAGGTATTTAGGAAGATGACAGACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCATACTGCAAGCACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGTCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139486916 289 - 152096393 ATATGTAGGAAGTAATCAAGAGTACATGGATTTCTGCTCAGTGCAGCATCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAACAATGTAACGAAAC--GAAGAGGTATTTAGGAAGATGACAGACTGCTGAAGAAGATGCAGAGCAGGAATACGAACCACACTGCAAGCACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGTCAG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436513 291 + 70235451 ATACGTAGGAAGTAATCGAGAGTACATGGATTTCTGCTCAGTGCAACACCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAACAATGCAACGAAACAAAGAGAGGTATTTAGGAAGATGACACACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCACACTGCAAGCACAAAGGAGCTCTTCCTTGGTAATGAGTAACTGTCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63127825 291 - 75711847 ATACGTAGGAAGTAATCGAGAGTACATGGATTTCTGCTCAGTGCAACACCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAACAATGCAACGAAACAAAGAGAGGTATTTAGGAAGATGACACACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCACACTGCAAGCACAAAGGAGCTCTTCCTTGGTAATGAGTAACTGTCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687214 291 - 18804593 ATACGTAGGAAGTAATCGAGAGTACATGGATTTCTGCTCAGTGCAACACCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAACAATGCAACGAAACAAAGAGAGGTATTTAGGAAGATGACACACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCACACTGCAAGCACAAAGGAGCTCTTCCTTGGTAATGAGTAACTGTCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298419 290 + 18905526 ATAGGTAGGAAGTAATCAAGAGTACATGGA-TTCTGCTCAGTGCAGCACCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAATAATGCAACGAAACAAAGAGAGGTATTTAGGAAGATGACATACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCACACTGCAAGCACAAAGACGCTCTTCCTTGGTAATGAGTAACTGTCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60127722 290 - 72318688 ATACATAGGAAGTAATCAAGAGTACATGGA-TTCTGCTCAGTGCAGCACCAAAGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAACAATGCAACGAAACAAAGAGAGGTATTTAGGAAGATGACATACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCACACTGCAAGCACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGTCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463669 290 - 1517660 ATACGTAGGAAGTAATCAAGAGTACATGGA-TTCTGCTCAGTGCAGCACCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACGAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAATAATGCAACGAAACAAAGAGAGGTATTTAGGAAGATGACATACTGCTGAAGAAGATGCAGGGCAGAAATGTGAACCACACTGCAAGCACAAAGACGCTCTTCCTTGGTAATGAGTAACTGTCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559456 291 + 6513552 ATACGTAGGAAGTAATCAAGAGTACATGGATTTCTGCTCAGTGCAGCACCAAGGTCAGGCTCATTTTGGAAACTGTGCCTGACCAAAAGCCAAGAACCATAAAATTAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGACAGTAAACAATGCAACGAAACAAAGAGAGGTGTTTAGAAAGATGACATACTGCTGAAGAAGATGCAGAGCAGAAATGTGAACCACACTGCAAGCACAAAGGAGCTCTTCCTTGGTAATGAGTAACTGTCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340606 291 + 117903854 ATATTTAGGAAGTAATCAAAAGTACATGGACTTCTGATCAGTGCAGCATCAAGGTCAGGCTCATTTTGGAAACTATGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATACTGAAGGAACTGAACCGAAGAGAATAAACAATGCAACGAAAGAAATAAAGGTATTTAGGGAGACGACAGACTGCTGAGGAAGATGCAGAGCAGAAATGTGAACCACATTACAAGTACAGAGAAGCTCTTCTTTGGTAATGAGTAACTGGCAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517590 291 - 31320352 ATATTTAGGAAGTAATCAAAGGTACATGGACTTCTGATCAGTGCAGCATCAAGGTCGGGCTCATTTTGGAAGCTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACGATACTGAAGGAACTGAACCAAAGAGAATAAACAATGCAATGAAAGAAATACAGGTATTTAGGGAGATGACAGACTGCTGAGGAGGATGCAGAGCAGAAATGTGAACCACATTACAAGTACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGGCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1719876 287 + 2203405 ATATTTAGGAACTAATCAAAGGCACATGGACTTCTGATCAGTGCAGCATCAAGGTCAGGCTCATTTTGGAAGCTGTGCCTGACCAAAAGCCAAGAACCATAAAATCAGCCCACCAACGAAGTATCACTCAAGGACAATACTGAAGGAACTGAACCAAAGAGAATAAACAATGCAAT----GAAATAGAGGTATTTAGGGAGTTGACAGACTGCTGAGGAAGATGCAGAGCAGAAATGTGAACCACATTACAAGTACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGGCAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667640 291 - 14941987 ATATTTAGGAAGTAATCAAAGGTACATGGACTTCTGATCAGTGCAGCTTCAAGGTCAGGCTCATTTTGGAAGCTACGTCTGACCAAAAGCCAAGAACCGTAAAATCAGCCCACCAACAAAGCACCACTCAAGGACAATACTGAAGGAACTGAACCAAAGAGAATAAACAATGCAACGAAAGAAATAGAGGTATTTAGGGAGATGACAGACTGCTGAGGACGATGCAGAGCAGAAGTGTGAACCACATTACAAGTACAAAGAAGCTCTTCCTTGGTAATGAGTAACTGGCAG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41567751 291 + 83067054 ATAGGCAGGAAGTAATCAAGAGTGCATGGACTCCTGCTCAGTGCAGCGTCAAGGTCAGGTTCATTTTGGAAGCTGTTCTTGACAAAAAGCCAGGAAGCATAAAATCAGCCCACCAACACAGTACCACTCAAGGACAATTCTGGAGGAACTGAACCAAAGACACTAAACAATGCAACTAGTCAAATAGAGGTATTTAGGGAGATGACAGACTGCTGAAAAAAATGCAGAACAGAAATGTGAAGCACACTGTAAGTACAAAGAAGCTATTCCTTGGTAATGAGTAACTGCCAG i micMur3.chr19 C 0 I 252 s proCoq1.NW_012148742v1 1315602 291 - 1406956 ATATGCAGGAAGTAATCAAGAGTGCATGGACTCCCGCTCAGTGCAGCATCAAGGTCAGGCTCATTTTGGAAGCTGTTCTTGACAAAAAGCCAGGAAGCATAAAATCGGCCCACCAACACAGTACCACTCAAGGACAATTCTGAAGGAACTGAACCAAAGACACTAAACAATGCAACGAATCAAATAGAGGTATTTGGGGAGATGACAGACTGCTAAAAAAGATGCAGAACAGAAATGTGAAGCACACTGCAAGTACAAAGAAGCTATTCCTCAGTAATGAGTAACTGGCAG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11284766 284 - 20685099 ACATGTAAGAAGACATCAAGAGT-CACAGA------CTCAGTGCAGCTTCAAGGTCAGGCTGCTTTTGAAAATTGTTCCTGACAAAAATCCAAGAGGCATAAAATCAGCCCACCAACAAAGTACCACTCAAGGACAATTCTGAAGGAACTGAACCGAAGACACCAAACAAGGCAACGAAACGAATAGAGGTATTTGGGGAGATGACAGGCAGGTGAGGAAGAGGCAGAACAGACAGGTGGGGTGCACTCCAAGTACAAAGAAGCTCTTCCTCGGTGGTGGGTAACTGGCAG i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111914628 274 + 195471971 ATATATAAGAAGCATTTGGGCGTGCAGGAAATTCTGCTCAGTGTAGCATTAAGGTCAGATTCATTTTGAAACCAGTTCTTGACAAGAAGCCAACAACCGTAAAATCAG-CTACCAGCAAAGGATCACTCAAGGACAATTCTAAAGGAACTGAACCAAAGGTGGTAAACACTACAA----------AGTGATACTTAGAGTGATGACAGATTGCTGAAGAAGAGGCAGAGCAGAAATTTTCA-CACACTG-GAGAACAGCGAAGTCATTCATCATCAGTTAATAACTG---- i mm10.chr1 I 391 C 0 s canFam3.chr1 112368268 291 - 122678785 ATATGTAGGAAATAATCCAGCATGTGTGGACTTCTGCTTGGTGCAGAGTCAAGGTCAGGCTCGTTTTAGAAGCTGTTCCTGACAAAAAACCAAGAGCCATAAAATCATCCCACCAACAAAGAACCACTCAAGGACAATTTTGAGGTAACTGAAGCGAGGACAATAAACAATGCGAAGAAACAAATCGAGGTGTTCCGGGAGATGACAGACTGCTGAGAAAGATATAGAGCAGAAATCCCAAGCACACTCCAAGTACACAGAAGCTACTCCTTGGTCAGAAGTAACTGGCAG i canFam3.chr1 I 1 C 0 s dasNov3.JH575754 549063 268 - 2150887 ATATATAAGTAGTAATCTGGAGTGCATGGATTCCTACTC----------------------CATACTGGAAGCTGTCCCTGATAAAAAGCCAGGAACCATAAAACCAACCCACCTATAAAGTATCATTCTAGGACAGTTCTAAAGGAACTGAACCAAGGACAATAAACATTACCAAGAAAGAAATGGAAGTGTTT-GGGTGATGACAGACTGCTGAAGAAGATGCATGGTGAAAATCTGAAGCAAACTGCTAGTATGAAGCAGCTATTCCTCAGTAATGAGTAATTGGCAG i dasNov3.JH575754 C 0 C 0 a score=281834.000000 s hg38.chr18_GL383571v1_alt 197089 29 + 198278 TGGTCACTGA-AGTGTGGGCATTCCGCTTG s panTro5.chr18 65106756 26 + 78221452 TGGTCACTGA-AGTGTGGGCATTCCGC--- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225753 26 + 77229886 TGGTCACTGA-AATGTGGGCATTCCGC--- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445232 29 + 17472758 TGGTCACTGA-AGTGTGGGCATTCCACTTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487205 29 - 152096393 TGGTCACTGA-AGTGTGGGCATTCCACTTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436804 29 + 70235451 TGGTCCCTGA-AGTGTGGGCATTCCATTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128116 29 - 75711847 TGGTCCCTGA-AGTGTGGGCATTCCATTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687505 29 - 18804593 TGGTCCCTGA-AGTGTGGGCATTCCATTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298709 29 + 18905526 CGGTCCCTGA-AGTGTGGGCATTCCACTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128012 29 - 72318688 TGGTCCCTGA-AGTGTGGGCATTCCGCTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463959 29 - 1517660 CGGTCCCTGA-AGTGTGGGCATTCCACTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559747 29 + 6513552 TGGTCCCTGA-AGTGTGGGCATTCTACTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340897 29 + 117903854 CGATCACTGA-AGTGTGAACATTCCACTTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517881 29 - 31320352 CGGTCACTGA-AGTGTGAACATAGCACTTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1720163 29 + 2203405 CGGTCACTGA-AGTGTGAACATTCCACTTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667931 29 - 14941987 CGGTCACTGA-AGTGTGAACATTCCACTTG i aotNan1.NW_018502140v1 C 0 C 0 s proCoq1.NW_012148742v1 1315893 30 - 1406956 CACTCTCTGACAGTGCAGGCATTCCACTTG i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11285050 29 - 20685099 CACCCCCTGACTGGG-GGATATTTCACTAG i otoGar3.GL873546 C 0 I 225 s mm10.chr1 111914902 21 + 195471971 --------GC-AATGTTGGTATTCCACTTA i mm10.chr1 C 0 C 0 s canFam3.chr1 112368559 29 - 122678785 CAATCACTCC-AGAGTAAGGATTCCACTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 549331 13 - 2150887 ----CCCTTA-TTTAAAG------------ i dasNov3.JH575754 C 0 C 0 e micMur3.chr19 41568042 252 + 83067054 I a score=66682.000000 s hg38.chr18_GL383571v1_alt 197118 5 + 198278 TATTG s panTro5.chr18 65106782 3 + 78221452 --TTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225779 3 + 77229886 --TTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445261 5 + 17472758 TATTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487234 5 - 152096393 TATTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436833 5 + 70235451 TGTTG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128145 5 - 75711847 TGTTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687534 5 - 18804593 TGTTG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298738 5 + 18905526 TGTTG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128041 5 - 72318688 TGTTG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463988 5 - 1517660 TGTTG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559776 5 + 6513552 TGTTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340926 5 + 117903854 CATTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517910 5 - 31320352 CATTG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1720192 5 + 2203405 CATTG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667960 5 - 14941987 CATTG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41568294 5 + 83067054 tattg i micMur3.chr19 I 252 C 0 s proCoq1.NW_012148742v1 1315923 5 - 1406956 TATTG i proCoq1.NW_012148742v1 C 0 I 223 s otoGar3.GL873546 11285304 5 - 20685099 tatTG i otoGar3.GL873546 I 225 C 0 s mm10.chr1 111914923 5 + 195471971 TGTCA i mm10.chr1 C 0 C 0 s canFam3.chr1 112368588 5 - 122678785 TATTG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 549344 5 - 2150887 CATCA i dasNov3.JH575754 C 0 C 0 a score=3212556.000000 s hg38.chr18_GL383571v1_alt 197123 214 + 198278 TGTTTTTAAGGAGGGAAGCACTTAGAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACCCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAATAATTAATCATAAAT------ATTCTTTTCCAAATAATCTGTtcattcagcattctcagttggaaacaacaaaatctac--tttagcaagattgaaatgcaagtttttattaaaggaaatgag s panTro5.chr18 65106785 214 + 78221452 TGTTTTTAAGGAGGGAAGCACTTAGAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACCCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAATAATTAATCATAAAT------ATTCTTTTCCAAATAATCTGTtcattcagcattctcagttggaaacaacaaaatctac--tttagcaagattgaaatgcaagtttttattaaaggaaatgag i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225782 214 + 77229886 TGTTTTTAAGGAGGGAAGCACTTAGAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACCCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAATAATTAATCATAAAT------ATTCTTTTCCAAATAATCTGTtcattcagcattctcagttggaaacaacaaaatctac--tttagcaagattgaaatgcaagtttttattaaaggaaatgag i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445266 214 + 17472758 TGTTTTTAAGGAGGGAAGCACTTAGAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACCCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAATAATTAATCATAAAT------ATTCTTTTCCAAATATTCTGTtcattcagcattctcagttggaaacaacaaaatctac--tttagcaagattgaaatgcaagtttttattaaaggaaatgag i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487239 214 - 152096393 TGTTTTTAAGGAGGGAAGCACTTAGAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACTCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAATAATTAATCATAAAT------ATTCTTTTCCAAATATTCTGTtcattcagcattctcagttggaaacaacaaaatctac--ttcagcaagattgaaatgcaagtttttattaaaggaaatgag i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57436838 214 + 70235451 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCCGCTGATGCCAACTAAAAAACTCATTTGCCTGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAAT------ATTCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagtaagattgaaatgcaagtttttattaaacgaaatgag i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128150 214 - 75711847 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCCGCTGATGCCAACTAAAAAACTCATTTGCCTGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAAT------ATTCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagtaagattgaaatgcaagtttttattaaacgaaatgag i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687539 214 - 18804593 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCCGCTGATGCCAACTAAAAAACTCATTTGCCTGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAAT------ATTCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagtaagattgaaatgcaagtttttattaaacgaaatgag i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298743 214 + 18905526 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCGGTTGATGCCAACTAAAAAACTCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAAT------ATTCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagtaagattgaaatgcaagtttttattaaacgaaatgag i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128046 214 - 72318688 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACTCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAAT------ATTCTCTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagtaagattgaaatgcaagtttttattaaacgaaatgag i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 463993 214 - 1517660 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCAGTTGATGCCAACTAAAAAACTCATTTGCCCGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAAT------ATTCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagtaagattgaaatgcaagtttttattaaacgaaatgag i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559781 214 + 6513552 TGTTTTTAAGGAGGGAAGCACTTACAGCTTAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACTCATTTGCTCGATACAGCTGAAGACATGGAGAA---TTTCCAGTAATTAAAAATAAGT------ATTCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacaaaatctac--tttagcaagattgaaatgcaagtttttattaaacgaaatgag i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105340931 214 + 117903854 TGTTTTTAATGAGAGAAGCACTTAGCGCTCAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACTCATTTGCTGGATACAGATGAAGACATGGAGAA---TTTCCAGTAATTAATAACAAAT------AATCTTTTCCAAATATTCTTTtcattcagtactctcagttggaaacaacagaatctac--tctagcaggattgaaatgcaagtgtttattaaaggaaatgag i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19517915 213 - 31320352 TGTTTTTAATGGGAGAAGCACTTAGAGCTCAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAATTAAAAAACTCATTTGCTCCATATAGATGAAGACATGGAGAA---TTTCCAGTAATTAATAACAAAT------AATCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacagaatctac--tctagcaggattg-aatgcaagtgtttattaaaggaaatgag i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1720197 212 + 2203405 TGTTTTTAATGGGAGAGGCACGTAGAGCTCAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAATTAAAAAACTCA-TTGCTTGATACAGATGAAGACATGGAGAA---TTTCCAGTAATTAATAACAAAT------AATCTTTTCCAAATATTCTTTtcattcagcattctcagttggaaacaacagaatctac--tctagcaggattgaaatgcaagtgtttatt-aaggaaatgag i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3667965 214 - 14941987 TGTTTTTAATGAGAGGAGCACTTAGAGCTCAAAA--------------------------------------------------------------------------GTGCAGCTGATGCCAACTAAAAAACTCACTTGCTCGATACAGATGAAGACATGGAGAA---TTTCCAGTAATTAATAACAAAT------AATCTTTTCCAAATATTCTTTtcattcagcactctcatttgaaaacaacagaatctac--tctagcaggattgaaatgcaagtgtttattaaaggaaatgag i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41568299 212 + 83067054 cgTTTTTAAGGAGAGAAGTACTTAGAACTTAAAA--------------------------------------------------------------------------ATAGAGCTGATGGCTGCTAGAAAACTTACTTGCTCATTACAGCCAAAGACATGGAGAA---TTTTCAGTAATTAATAACAAAT------ATTCTTTTATGAATATTGTTTTCATTTAGTATTCTCAGTTGGAAACAACAGAATCTAC--TCTAGCAAGATTG-AAAACAAG-TTTTATTAAAGGAAATAGG i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1316151 213 - 1406956 TGTTTTTGAGGAGAGAAGTACTTAGAACTTAAAA--------------------------------------------------------------------------ATAGAGCTGATGCCCACTGGAAAACTTACTTGCTCATTACAGCCAAAGACATGGAGAA---TTTTCAGTAATTAACAACAAAT------ATTCTTTTACAAATATTCTTTtcatttaatattctcagttggaaacaacagaatctac--tctagcaagattg-aaagcaagtttttattaaaggaaatagg i proCoq1.NW_012148742v1 I 223 C 0 s otoGar3.GL873546 11285309 220 - 20685099 TGTTTTTAAGGAGAGAAGCACTTAGAACTTAAAA--------------------------------------------------------------------------ATACAGCCGATGCCTGCTAGAAAACGTATGTGCTCATTATAGCCAAAGACATGAAGAA---TTTGCAGTCATTAGTGATGAACTTTTTGGTTTTTTTACAAATATTCTTTtcatttagcattttcagttggaaacaatagaatctac--tccagcaagattgaaaagcaagtttttattaaaggaaagagg i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111914928 203 + 195471971 GGTTTTTAAGGAGGGGAGCAACTAGATCTTAAAA---------------------------------------------------------------------------TGGAGATGCTGTTACCTATAACATTCATTTGCTCATTATAATAGAAGAGATGCAGAGGCCTTTTTTTTAAATGATAATAAAT------ATGC-----------ATCCCTTCATTTAGTATTCTCAGTTG-AAATAACAGAATCTAC--TATAGTAAGGGCAAAAAGCAAAATTTTAAT-AGGAAAGTAAT i mm10.chr1 C 0 C 0 s canFam3.chr1 112368593 252 - 122678785 TGCTTTACAGAGGAGAGGCACTTAGAAGTTAAAAATACAGCTggtgttgaatccctatgttgtagacctgaaactaatataatgtgtcaactacacttcaagagaaaGATACAGCTGATGCCAACTGTCAAGTGTATCTGCCAATTACAGCCAAAGAT----AGAA---TTTTCTATAAATAATAGCAAAT---------TTTTTCC-----------TCATTTGGTATACTTGCTTGGGAAGAACAAAATTGACTGTTTAGC------------------TTTGT--AAGAAAATGAG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 549349 195 - 2150887 TGTTTTTAAGGAGAGAAGGACTTAGAACTTAAAA--------------------------------------------------------------------------ATTTTGCTGATGCCAACTATAAAACTTATCTGTCAATTGCAGCCAAGTACATTGAGAA---GTTTCAATAATTAATGACAAAT------ATTCTTtt---------------agtcagtattcttagttggaaacaacagaatcca---tctagcaagattaaa---caaggtatcatgagaggaaacagg i dasNov3.JH575754 C 0 C 0 a score=1515914.000000 s hg38.chr18_GL383571v1_alt 197337 112 + 198278 ggagttcacaga--attttcaggagggacaaagaaccaggcttggtgctattcaattggaaacaatgGAGCCAGGAGCTGCACCCAAA-CACATAGGGAGGATGTTCTGCTAAAA s panTro5.chr18 65106999 112 + 78221452 ggagttcacaga--attttcaggagggacaaagaaccaggcttggtgctattcagttggaaacaatggagccaggagctgcacccaaa-cacatagggaggatgttctgctgaaa i panTro5.chr18 C 0 C 0 s panPan2.chr18 64225996 112 + 77229886 ggagttcacaga--attttcaggagggacaaagaaccaggcttggtgctattcaattggaaacaatggagccaggagctgcacccaaa-cacatagggaggatgttctgctgaaa i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445480 112 + 17472758 ggagttcacaga--attttcaggagggacaaaaaaccaggcttggtgctattcaattggaaacaatggagccaggagctgcacccaaa-cacatagggagaatgttctgctaaaa i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487453 112 - 152096393 ggagttcacaga--attttcaggagggacaacgaaacaggcttggtgctattcagttggaaacaatggagccagcagctgcacccaaa-cacatagggagaatgttctactaaaa i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57437052 112 + 70235451 ggagttcacaga--attttcaggaggaacaatgaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128364 112 - 75711847 ggagttcacaga--attttcaggaggaacaatgaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687753 112 - 18804593 ggagttcacaga--attttcaggaggaacaatgaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13298957 112 + 18905526 ggagttcacaga--attttcaggaggaacaatgaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128260 112 - 72318688 ggagttcacaga--attttcaggaggaacaatgaaccaggcttggtgctattcagctggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 464207 112 - 1517660 ggagttcacaga--attttcaggaggaacaatgaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3559995 112 + 6513552 ggagttcacaga--attttcaggaggaacagcaaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-cacatagtgagaatgttctactaaaa i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105341145 112 + 117903854 gtagctcacaga--attttcaggagggtcaaagaaccaggcttggtgctattcagttggaaacaatggagccaggagctgcaccccaa-aacaaagtaagaatgttctagtaaaa i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19518128 112 - 31320352 atacttcgcaga--attttcaggagagtcaaagaaccaggcttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-aacgtagtgagaatattctagtaaaa i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1720409 112 + 2203405 gtggttcacaga--attttcaggagggtcaaagaaccaggtttggtgctattcaactggaaacaatggagccaggagctgcacccaaa-aacatagtgagaatgttctagtaaaa i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3668179 112 - 14941987 gtagttcacaga--attttcagtagggtcaaagaaccagccttggtgctattcaactggaaatgatggagccaggagctgcacccaaa-aacatagtgagaatgttctagtaaaa i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41568511 110 + 83067054 GGACTTCATGGA--ATTTTCAGGAGGGGGAA--AATCAGGTTTGCTGTTCCACAGTTGGAAACAAAAGAACCAGGAGCTATATTCAAA-TATGTAGTGAGAATGTTCTAGTAAAA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1316364 112 - 1406956 ggagttcattga--attttcaggagggggaaagaatcaggcttggtattcctcagttggaaacgaaggaaccaggatctgtacccaaa-tatgtagtgagaatattctagtaaaa i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11285529 111 - 20685099 ggagttcatgga--atattcagggatgggaaagaatcaggcttggtgctccttagctggaaacaaAAGAACCAGGAACTATACCCAGA-TACACAGTGAGAGTGTTCTCCT-AAC i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111915131 101 + 195471971 AGAATGCACAAAAGATCTTCAG------TGAGGAATTAGCCTCCATGCTACT---TTGGAATAAAAGG-----GAAGTATTAACCAAAGCACACAGAAAGAATATTATATTATGC i mm10.chr1 C 0 C 0 s dasNov3.JH575754 549544 95 - 2150887 aaagcccacaga--acttccaaagggca-----------------tattttccagctgggaacaagggagccaggaattattctcagc-cacgcagtgacaacactctagtaaaa i dasNov3.JH575754 C 0 C 0 e canFam3.chr1 112368845 0 - 122678785 C a score=337487.000000 s hg38.chr18_GL383571v1_alt 197449 27 + 198278 Acaccacaactgccatagc-----tcaccgct s panTro5.chr18 65107111 27 + 78221452 acaccacaactgccatagc-----tcaccgct i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226108 27 + 77229886 acaccacaagtgccatagc-----tcaccgct i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445592 27 + 17472758 acaccacaactgccatagc-----tcactgct i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487565 27 - 152096393 acaccacaactgccgtagc-----tcactgcc i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57437164 27 + 70235451 acaccaaaactgctatagc-----tcaccact i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128476 27 - 75711847 acaccaaaactgctatagc-----tcaccact i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687865 27 - 18804593 acaccaaaactgctatagc-----tcaccact i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13299069 27 + 18905526 acaccaaaactgccatagc-----tcaccacc i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128372 27 - 72318688 acaccaaaactgccatagc-----tcaccact i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 464319 27 - 1517660 acaccaaaactgccatagc-----tcaccacc i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3560107 27 + 6513552 acaccaaaacttccatagc-----tcaccgcc i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105341257 27 + 117903854 acaccacaagtgccatagc-----tcactgcc i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19518240 27 - 31320352 acaccacaagtgccatagc-----tcactgcc i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1720521 27 + 2203405 acaccacaagtgccatagc-----tcactgcc i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3668291 27 - 14941987 acaccacaaatgccatagc-----tcactgcc i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41568621 27 + 83067054 ACACCACAACTGCCACAGC-----TCATCACC i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1316476 27 - 1406956 acaccacaactgccacagc-----tcatcacc i proCoq1.NW_012148742v1 C 0 C 0 s otoGar3.GL873546 11285640 27 - 20685099 ATGCCGCAAGGGCCACAGC-----TCCTCAGT i otoGar3.GL873546 C 0 C 0 s mm10.chr1 111915232 27 + 195471971 TCACCATCATTATAACTGC-----TCTTCACT i mm10.chr1 C 0 N 0 s canFam3.chr1 112368845 17 - 122678785 ACACCATCAC---------------CATCACT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 549639 26 - 2150887 ------tgactgccaccaccccagtcaccatt i dasNov3.JH575754 C 0 C 0 a score=3065526.000000 s hg38.chr18_GL383571v1_alt 197476 234 + 198278 ggacgttga-caaggatattgattgaacattggaagttctgccacag-tcccaaagaactagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgcatctaattggtataacctaggccaagcacccacttaccagcaactaggaagtgggagaaatttagtatttggAAATCTA s panTro5.chr18 65107138 234 + 78221452 ggacgttga-caaggatattgattgaacatcagaagttctgccacag-ccccaaagaactagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgcatctaattggtataacctaggccaagcacccacttaccagcaactaggaagtgggagaaatttagtatttggaaatcta i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226135 234 + 77229886 ggacgttga-caaggatattgattgaacatcggaagttctgccacag-ccccaaagaactagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgcatctaattggtataacctaggccaagcacccacttaccagcaactaggaagtgggagaAATTTGGTATTTGGAAATCTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445619 234 + 17472758 ggacgttga-caaggatattgattgaacgtcggaagttctgccacag-ccccaaagaactagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgcatctaattggtataacctaggccaagcacccacttaccagcaactaggaagtgggagaaatttagtatttggaaatcta i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487592 234 - 152096393 ggacgttga-caaggatattgattgaacatcggaagttctgccgcag-ccccaaagaactagacggccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgcatctaattggtataacctaggccaagcacccacttactagcaactaggaagtgggagaaatttagtatttggaaatcta i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57437191 234 + 70235451 ggacattga-caaggagattgattgaacatcggaagttctgctacag-cctcaaagaaccagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcatccacttactagcaactaggaagtgggagaaatttagtatttggaaatcta i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128503 234 - 75711847 ggacattga-caaggagattgattgaacatcggaagttctgctacag-cctcaaagaaccagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcatccacttactagcaactaggaagtgggagaaatttagtatttggaaatcta i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13687892 234 - 18804593 ggacattga-caaggagattgattgaacatcagaagttctgctacag-cctcaaagaaccagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcatccacttactagcaactaggaagtgggagaaatttagtatttggaaatcta i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13299096 234 + 18905526 agacattga-caaggatattgattgaacatcggaagttctgctacag-cctcaaagaaccagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcacccacttactagcaactatgaagtgggagaaatttagtatttggaaatcta i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128399 234 - 72318688 ggacattga-caaggatattgattgaacatcggaagttctgctacag-cctcagagaaccagacagccccaccactgtgctcatccaaagatcagtccacatgttggtgcct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcacccactcactagcaactaggaagtgggagaaatttagtatttggaaatcta i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 464346 234 - 1517660 ggacattga-caaggatattgattgaacatcggaagttctgctacag-cctcaaagaaccagacagccccaccactgtgctcatccaaagatcagtccacatgttggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcacccacttactagcaactatgaagtgggagaaatttagtatttggaaatcta i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3560134 234 + 6513552 ggacattga-caaggatattgattgaacatcggaagttctaccacag-ccccaaagaactagacagccccaccactgtgctcatccaaagatcagtccacatattggtggct---atgattttatgctg-ccccttccacatctagttttcatttgagtgtatctaattggtataacctaggccatgcacccacttactagcaactaggaagtgggagaaatttagtatttggaaatcta i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105341284 227 + 117903854 agacattgaccaaggatattgattgaactttagaagttctgccacagcccccaaagaactagatagctccactactgttctcaaccaaagatcagttcacatgtttgtggc-----------tatgctg-ccccttccacatccagttttcatttgagtgcatctagttggtataacctagtccatgcactcacttgctagtcacaaggaagtgggagaaatttagtatttggAAATC-A i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19518267 226 - 31320352 ggacattga-caaggatattgattgaacttcagaagttctgccacagcccccaaagaactagatagctccaccactgttctcaaccaaagatcagttcacatgtttgtggc-----------tatgctg-ccccttccacatccagttttcatttgagtgcttctaattggtataacctagtccatgtacccacttgctagccacaaggaagtgggagaaatttagcatttggaaatc-a i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1720548 226 + 2203405 ggacattga-caaggatattgattgaacttcagaagttctgccacagaccccaaagaactagatagctccagcactgttctcaaccaaagatcagttcacatgtttgtggc-----------tatgctg-ccccttccacatccagttttcatttgagtgcatctaattggtataacctagtccatgtacccacttgctagccacaaggaagtaggagaaatttagtatttggAAATC-A i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3668318 225 - 14941987 agacattga-caaggatattgatcgaagttcagaaattctgccacagcccccaaagaactagatagctccaccactgttctcaaccaaagatcagttc-catgtttgtggc-----------tatgctg-ccccttccacatccagttttcatttgagtacatctaattggtataacctagtccatgcacccacttgctagccacaaggaagtgggagaaatttagtatttggaaatc-a i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41568648 231 + 83067054 GGGCATTGA-CCAGGTTATAGACAAAACACTGGAAGTCCTACCACAGCTACAAGAGAACTGGACGTCTCCACTACTGTGCTTGTCCAATGATCTACT----TGCTTCCAGTC---ATTATTTCATGCTG-CCCCTTTCACATGCAGTTCTCAGTTGAGTGCATCTAATTGGTATAATCTAGGCCATATGCCTACTCACTAGCAACAAGGAAGCATGAAAAATTGAGTATTGGGAAATCTA i micMur3.chr19 C 0 C 0 s proCoq1.NW_012148742v1 1316503 231 - 1406956 gggcattga-ccaggttacagacaaaacactggaagtcctaccacagccctcagagaactggacatctctactgctgtgcttgtccaaagatctgct----tgcttgtggtc---atcatttcatgctg-cccctttcacatgcagttctcatttgagggcatctaattggtataatctaggccatatgcctactcactagcagcaaggaagcatgaaaaattgagtatttggaaatcta i proCoq1.NW_012148742v1 C 0 N 0 s otoGar3.GL873546 11285667 233 - 20685099 GAGCCGTGA-CCAGTCCACAGACCCTCCACC-AAAGCTGCGTGACGGCCCACAAAGAACCATGCACCTCTACCACTGTGCTTAGCCAAAGATCTGTC----TACTTACTCCCTGTGTCACTTCATGCTG-CCCCTTTCCTGTGCAGTtctcgtttgggtgcatctaattggtataatctaggccatttgcccgctccctagcagcaaggaagcatgagaaattgagtatttgcggatcta i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112368862 201 - 122678785 TGGCATTGA-CAAGGCTACACA-------------------CCACC--TCCCAAAGAACCAGACA-TTGCACCACTGTGCTTGCTCACATACCAACTGACCTATT-GTGACC---ATCCTT------TA-TACCTCTCATATCCAGTTCACAGTTgagtgcatctaatcggtgtaacattggcaacatgccttctcact----gcaaggaagtgagc-aaattcggtatttagatattca i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 549665 230 - 2150887 tgggatgca-tcagcctgtgtactgaatgtccgaagctctgccgcagctcccaaagaaccaggtattctcac-acggtgtttgcccgaacatcagcgtacgtatttatggcc---atccctccacactgcccccttctacttccag-----gtctgtgtgcatcaaattggtatagcctaggccacttgtctattcactagccacaaggaagtatgagaaatttagaacttgggaatcga i dasNov3.JH575754 C 0 C 0 a score=5377911.000000 s hg38.chr18_GL383571v1_alt 197710 438 + 198278 TTTCAGAAGGATGG-GATGTGCA------------TATCAAAATATTTAGGAGATGTGCAAAAGA-TGCCAGCCAGT-AGGAATAACAGAAGGTCACCTAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAG----ACACGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGCGTAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactcatttggaaggcttgttaaagcacagattgcttggcacaggcccgtaagtttccattcagaaggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagttccaggaccacaccccgagaacccctgGACTACTACACGATAAGCATTTCCTTGAGTAACTGCTGGTTAAAGTTCT s panTro5.chr18 65107372 438 + 78221452 tttcagaaggatgg-gaTGTGCA------------TATCAAAATATTTAGGAGATGTGCAAAAGA-TGCCAGCCAGT-AAGAATAACAGAAGGTCACCTAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAG----ACACGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGCGTAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactcatttggagggcttgttaaagcacagattgcttggcacaggcccgtaagtttccattcagaaggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagttccaggaccacaccctgagaacccctgGACTACTACACGATAAGCATTTCCTTGAGTAACTGCTGGTTAAAGTTCT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226369 438 + 77229886 TTTCAGAAGGATGG-GATGTGCA------------TATCAAAATATTTAGGAGATGTGCAAAAGA-TGCCAGCCAGT-AAGAATAACAGAAGGTCACCTAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAG----ACACGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGCGTAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactcatttggagggcttgttaaagcacagattgcttggcacaggcccgtaagtttccattcagaaggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagttccaggaccacaccctgagaacccctgGACTACTACACAATAAGCATTTCCTTGAGTAACTGCTGGTTAAAGTTCT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5445853 438 + 17472758 ttttagaaggatgg-gaTGTGCA------------TATCAAAATATTTAGGAGATGTGCAAAAGA-TGCCAGCCAGT-AAGAATAACAGAAGGTCACCTAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAG----ACACGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGTGTAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactcatttggagggcttgttaaagcacagattgcttggcacaggcccgtaagtttccattcagaaggcct--ggggttgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagttccaggaccacaccccgagaacccctgGACTACTACACGATAAGCATTTCCTTGAGTAACTGCTGGTTAAAGTTCT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139487826 438 - 152096393 ttttagaaggatgg-gaTGTGCA------------TATCAAAATATTTAGGAGATGTTCAAAAGA-TGCCAGCCAGT-AAGAATAACAGAAGGTCACTTAATTCCTGACATA-AGAAAATGACCATTCCTGAAAAGTTTATCCATAAAGAG----ACACGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAGAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactcatttggagggcttgttaaagcacagattgcttggcacaggcccgtaagtttccattcagaagccct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagttccaggaccacaccctgagaacccctgGACTACTACACCATAAGCATTTCCTTGAGTAACTGCTGGTTGAAGTTCT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57437425 448 + 70235451 ttttagaaggatgg-gatgtgcaatatatt-aaactatcaagatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcacCAAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAA----ACATGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaaccg--gattgcatgatgaactaatttggagggcttgttaaagcacagattgtttggcacaggcctgtaagcttccatttagagggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccagaaccacaccc-gacaacccctgGACTACTACACCATTAGCATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63128737 448 - 75711847 ttttagaaggatgg-gatgtgcaatatatt-aaactatcaagatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcaccaAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAA----ACATGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaaccg--gattgcatgatgaactaatttggagggcttgttaaagcacagattgtttggcacaggcctgtaagtttccatttagagggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccagaaccacaccc-gacaacccctgGACTACTACACCATTAGCATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13688126 448 - 18804593 ttttagaaggatgg-gatgtgcaatatatt-aaactatcaagatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcacCAAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAA----ACATGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaacca--gattgcatgatgaactaatttggagggcttgttaaagcacagattgtttggcacaggcctgtaagtttccatttagagggcct--ggggttgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccagaaccacaccc-gacaacccctgGACTACTACACCATTAGCATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13299330 448 + 18905526 ttttagaaggatgg-gatgtgcaatatatt-aaactatcaagatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcaccaAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAA----ACATAAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaaccg--gattgcatgatgaactaatttggagggcttgttaaagcacagattgtttggcacaggcctgtaagtttccatttagagggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccagaaccacacCC-AACAACCCCTGGACTACTACCCCATTAGCATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60128633 447 - 72318688 ttttagaaggatgg-gatgtgcaatgtgtt-aaactatcaaaatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcacCTAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAA----ACATGAAAAAGT-GACCAGAAGACAA-CCTAGAATTGAAAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactgatttggagggcttgttaaagcacagattgtttggcacaggcctgtaagtttccatttagagggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccagaaccacaccc-gacaacccctgGACTACTACACCATTAGCATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 464580 448 - 1517660 ttttagaaggatgg-gatgtgcaatatatt-aaactatcaagatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcaccaAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAA----ACATGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCAGAGTAGTCATCATAAACTAGACTagtggtcttcaaaccg--gattgcatgatgaactaatttggagggcttgttaaagcacagattgtttggcacaggcctgtaagtttccatttagagggcct--ggggtcgggcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccagaaccacacCC-AACAACCCCTGGACTACTACCCCATTAGCATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3560368 448 + 6513552 ttttagaaagatgg-gatgtgcaatgtatt-aaactatcaaaatatttaggagatgttcaaaaga-tgccagccagt-aagaataacagaaggtcacCTAATTCCTGACATA-AGAAAATGACCATTCCTGGAAAGTTTATCCATAAAGAG----ACATGAAAAAGTGGACCAGAAGACAA-CCTAGAATTGAAAGATCGGAATAGTCATCATAAACTAGACTagtggtcttcaaactg--gattgcatgatgaactaatctggagggcttgttaaagcacagattgtttggcacaggcctgtaagtttctatttagagcgcct--ggggtcgggcaggagatttcacagttctaacaaagtctcaggaaaccttgataatgatagtcccagaaccataccc-gacaacccctgGACTACTACACCATTAGTATTTCCTTGAGTAGCTGCTGGTTAAAGTTCT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105341511 449 + 117903854 TTTTGAAAGTCTGA-GATGTGCAATGTATTAAAACTACCAAAATATCGAGGAGATATTCAAAAGA-TGCCAGGCTGT-AAGTATAACAGATGGTCAGCTAATTCCTGACACA-AGGAAATGACCATTCATGGAAAGTTTATCTATAAAGAG----ACATCAAGAAGTGGACCAGAAGACGA-TCTAAAACTGAAAGATCAGAGCAGTCACCACAAACTAGACTagtggtcttcaaactg--gagtgcatgatggattcctttgcagggcttgttaaatcccagattgcttggcacaggcccacgagtttctattcagaaggcct---gggtcgtgcaggagattccacagttctaacaaagtctcaggtaaccttggtaatgatagtcccaggaccacaccctgagaacccctgGACTACTACACCATAAGCATTTCCTTGAGTAAATGCTGGTTGAAGTTCT i calJac3.chr13 C 0 I 319 s saiBol1.JH378121 19518493 425 - 31320352 ttttggaagtctgg-gatgtgcaatgtattaaaactatcaaaatattgaggagatgttcaaaaga-tgccagccagt-aagtataacagatgGTCAGCTAATTCCTGACACA-AGAAAATGACCGTTCATGGAAAGTTTGT-----------------------------CCAGAAGACAA-TCTAGAACTGAAAGATCAGAGCAGTCACCACAAACTAGACTACtggtcttcaaactg--gagtgcatgatggattccttttcagggctagttaaatcacagatggcttggcacaggcccataagtttccattcagaaggcct--ggggtcgtgcaggagattccacagttctaacaaagtctcaggtaaccttgataatgatagtcccaggaccatacactgagaacccctgGACTACTACACCATAAGCATTTCCTTGAGTAAATGCTGGTTAACGTTCT i saiBol1.JH378121 C 0 I 349 s cebCap1.NW_016107689v1 1720774 451 + 2203405 TTTTGGAAGTCTGG-GATGTGCAATGTATTAAAACTATCAAAATATCGATTAAATGTTCAAAAGA-TGCCAGCCAGT-AAGTATAACAGATGGTTAGCTAATTCCTGACACACAAAAAATGACCATTCCTGGAAAGTTTATCTATAAAGAG----ACATCAAGAAGTGGACCAGAAGACAA-TCTGGAACTGAAAGATCAGAGCAGTCACCACAAACTAGACTACtggtcttcaaactg--gagtgcatgatggattcctttgcagtgcttgttaaatcacagattgcttggcataggcccataagtttccattcagaaggcct--ggggtcttgcaggagattccacagttctaacaaagtctcaggtaaccttaataatgatagtcccaggaccacaccctgagaacccctgGACTACTACATCATAAGCATTTCCTTGAGTAAATGCTGGTTAAAGTTCT i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3668543 451 - 14941987 ttttggaagtctgg-aatgtgcaatgtattaaaactatcaaaatatcgaggagatgttcaaaaga-tgccagccagt-aagtataacagatgGTCAGCTAATTCCTGACACA-AGAAAATGACCATTCATGGAAAGTTTATCTATAAAGAG----ACATCAAGAAGTGGACCAGAAGACAATTCTAGAACTGAAAGATCAGAGCAGTCACCACAAGCTAGACTagtggtcttcaaactg--gagtgcatgatggattcctttgcagggcttgttaaatcacagattgcttggcacaggcccataaatttccattcagaaggcct--agggttgtgcaggagattccacagttctaagaaagtctcaggtaaccttgataatgatagtcccaggaccacaccctgagaacccctgGACTACTACACCATAAGCATTTCCTTGAGTAAATGCTGGTTAAAGTTCT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41568879 453 + 83067054 CTGTGGGAGGGTAGAAATGTACAATATATT-AAACTATCAAAATATTGAGAAGATGTTCAAACAG-TGCCAGTCAGTCAAGAATAAGAGATGACCAGCTAATTTCTGAAACA-GGAAAATGATAATTCATGTGAAGGATATCCCTAAAGAG----ACACCAAGAGATGGACCAGAAGACAA-CCTAGAATTGAATGATGAGACAAGTCATATTAAACCATAGTagtggtcttccaactt--gaatgtgtgttggaatccattggaggactggttaaagcacagattgctgggcactagttcatagtttctggtccagaaggccttgagagtgaggcaggagattctacaagtctaacaaacactcaggtgatcttgataatgatagtaccaggacaataccctgggaacccctgCACAACTGAATCATAAATATTTACTTTAGTAATAGCTCATTAAAGTTTT i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11285900 432 - 20685099 ctttgggagg-----catgcataatgtatg-aagctaccaaaatactgagaa---------------gCCAGTCAGTCAAGAC------ATGACCACTTAATTCCTGATGTG-GGAAAATGATCATTCCTGTTAAGGATGTTCCTAAAGGATGTCCCACCAAGACGTGGACCAGGAGACAA-CCTAGAATTGAATGATGAGAGGAGTCACAATAAACTACACcagtggttttccagttt--gggtgtgcattggaatcagttggaaggcttctgaaggacccatgttctgggcaccagctcatagttcccagttcagaaggcttccgggatgaggcaggaaattctacagttctaacaaactctcaggtaatcttgatgatgataagaccagaaccacacccggagaacccctgCACCACTAACCCACAAACATTTCCTTCAGTAACAGCTCATTAAACTATT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369063 427 - 122678785 ctttgagagggtgg-gacatacaatgtatg-aaacaatt---gttttaagggaaggttcaacaaa-tgctggtcagtcaagaataaATTATGGCTACCTTGCTCCTAACACA-GGGAAACGATCATTCTTGTGAA------------AGGT----GCACCAAGT----GGCTAGAAGTCAA-CCTAGATGTGAACAATGAGAGAAGTCAACATAAACTAGACTACCggtcctcagactttcacatgcatg--gaaatcacctgaagggcttgttaaaataccgattgctcagctgcagccc---agtttctgcttcagaggcct--ggcataagatgggatgttctacagttgtaacagactcccagat-accttgataatgataatcccaaggataaattctgagaaccattgGACTTCCAGATTATAAATATTTCCTTCGGTAATACCTGGTTAACATTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 549895 438 - 2150887 ctttgggaaactga-gacatacaatgtacg-aaactatcga-ataccaaagagatgttcaaaaaattgctggtcacttaagaaaaat--ATGACCGCCTAATTCCTGACAGA-AGGGAATGACCACTGCTGTGCA----AACCACAAAGGG----GCACCATGAAGCGACGCAGAAGATG--CCTAGAGTTGAATGATGAGAAAAGTCAAGATTAACTAGACGagcagtcctcaaacat--gaaagcccatcagaagaatcacctgcacttgtggaagcacagattttctgggccccaccccaagtctctgattcagaaggcat--gggctgggatgggag--tggacatttgtaacaagctcccaggtgaacttggtaatgttggccccaggaccacattctgagaaGGGCTGGA-TACTA-ACCGCAAATACTTCCTTTTA-AACAGCTGGATACAGGTTT i dasNov3.JH575754 C 0 C 0 a score=16511.000000 s hg38.chr18_GL383571v1_alt 198148 1 + 198278 C s panTro5.chr18 65107810 1 + 78221452 C i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226807 1 + 77229886 C i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446291 1 + 17472758 C i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488264 1 - 152096393 C i nomLeu3.chr4 C 0 I 293 s rheMac8.chr18 57437873 1 + 70235451 C i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63129185 1 - 75711847 C i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13688574 1 - 18804593 C i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13299778 1 + 18905526 C i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60129080 1 - 72318688 C i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 465028 1 - 1517660 C i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3560816 1 + 6513552 C i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342279 1 + 117903854 c i calJac3.chr13 I 319 C 0 s saiBol1.JH378121 19519267 1 - 31320352 c i saiBol1.JH378121 I 349 C 0 s cebCap1.NW_016107689v1 1721225 1 + 2203405 C i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3668994 1 - 14941987 C i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41569332 1 + 83067054 C i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11286332 1 - 20685099 C i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369490 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550333 1 - 2150887 C i dasNov3.JH575754 C 0 C 0 a score=173223.000000 s hg38.chr18_GL383571v1_alt 198149 10 + 198278 ACAAATTCAG s panTro5.chr18 65107811 10 + 78221452 ACAAATTCAG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226808 10 + 77229886 ACAAATTCAG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446292 10 + 17472758 ACAAATTCAG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488558 10 - 152096393 ACAAATTCAG i nomLeu3.chr4 I 293 C 0 s rheMac8.chr18 57437874 10 + 70235451 ACAAATTCAG i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63129186 10 - 75711847 ACAAATTCAG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13688575 10 - 18804593 ACAAATTCAG i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13299779 10 + 18905526 ACAAATTCAG i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60129081 10 - 72318688 ACAAATTCAG i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 465029 10 - 1517660 ACAAATTCAG i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3560817 10 + 6513552 ACAAATTCAG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342280 10 + 117903854 ACAAATTCAG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519268 10 - 31320352 ACAAATTCAG i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1721226 10 + 2203405 ACAAATTCAG i cebCap1.NW_016107689v1 C 0 C 0 s aotNan1.NW_018502140v1 3668995 10 - 14941987 ACAAATTCAG i aotNan1.NW_018502140v1 C 0 I 303 s micMur3.chr19 41569333 10 + 83067054 ACAAATTCAG i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11286333 10 - 20685099 ACAAATTCAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369491 10 - 122678785 GCAAATTCAA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550334 10 - 2150887 ACAAATTCAG i dasNov3.JH575754 C 0 C 0 a score=17290.000000 s hg38.chr18_GL383571v1_alt 198159 1 + 198278 T s panTro5.chr18 65107821 1 + 78221452 T i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226818 1 + 77229886 T i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446302 1 + 17472758 T i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488568 1 - 152096393 T i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57437884 1 + 70235451 T i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63129196 1 - 75711847 T i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13688585 1 - 18804593 T i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13299789 1 + 18905526 T i cerAty1.NW_012001075v1 C 0 C 0 s chlSab2.chr18 60129091 1 - 72318688 T i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 465039 1 - 1517660 T i manLeu1.NW_012106698v1 C 0 C 0 s colAng1.NW_012115433v1 3560827 1 + 6513552 T i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342290 1 + 117903854 T i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519278 1 - 31320352 T i saiBol1.JH378121 C 0 C 0 s cebCap1.NW_016107689v1 1721236 1 + 2203405 T i cebCap1.NW_016107689v1 C 0 N 0 s aotNan1.NW_018502140v1 3669308 1 - 14941987 T i aotNan1.NW_018502140v1 I 303 C 0 s micMur3.chr19 41569343 1 + 83067054 T i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11286343 1 - 20685099 T i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369501 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550344 1 - 2150887 T i dasNov3.JH575754 C 0 C 0 a score=109104.000000 s hg38.chr18_GL383571v1_alt 198160 8 + 198278 CTTGATGT s panTro5.chr18 65107822 8 + 78221452 CTTGATGT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226819 8 + 77229886 CTTGATGT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446303 8 + 17472758 CTTGATGT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488569 8 - 152096393 CTTGATGT i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57437885 8 + 70235451 CTTGATGT i rheMac8.chr18 C 0 I 617 s macFas5.chr18 63129197 8 - 75711847 CTTGATGT i macFas5.chr18 C 0 I 4 s macNem1.NW_012016688v1 13688586 8 - 18804593 CTTGATGT i macNem1.NW_012016688v1 C 0 I 627 s cerAty1.NW_012001075v1 13299790 8 + 18905526 CTTGATGT i cerAty1.NW_012001075v1 C 0 I 639 s chlSab2.chr18 60129092 8 - 72318688 CTTGATGT i chlSab2.chr18 C 0 C 0 s manLeu1.NW_012106698v1 465040 8 - 1517660 CTTGATGT i manLeu1.NW_012106698v1 C 0 I 686 s colAng1.NW_012115433v1 3560828 8 + 6513552 CTTGATGT i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342291 8 + 117903854 CTTGATGT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519279 8 - 31320352 CTTGATGT i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669309 8 - 14941987 CTTGATGT i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41569344 8 + 83067054 CTCTATGT i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11286344 8 - 20685099 CTTTATGT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369502 8 - 122678785 CTTAATGT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550345 8 - 2150887 CATGGTAT i dasNov3.JH575754 C 0 C 0 a score=57669.000000 s hg38.chr18_GL383571v1_alt 198168 7 + 198278 TGGATTA s panTro5.chr18 65107830 7 + 78221452 TGGATTA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226827 7 + 77229886 TGGATTA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446311 7 + 17472758 TGGATTA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488577 7 - 152096393 TGGATTA i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63129209 7 - 75711847 TGGATTG i macFas5.chr18 I 4 I 606 s chlSab2.chr18 60129100 7 - 72318688 TGGATTG i chlSab2.chr18 C 0 C 0 s colAng1.NW_012115433v1 3560836 7 + 6513552 TGGATTG i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342299 7 + 117903854 TGGATTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519287 7 - 31320352 TGGATTG i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669317 7 - 14941987 TGGATTG i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41569352 7 + 83067054 TGGATTG i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11286352 7 - 20685099 TGCATTG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369510 7 - 122678785 TGAATTA i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550353 7 - 2150887 TGGATTG i dasNov3.JH575754 C 0 C 0 e manLeu1.NW_012106698v1 465048 686 - 1517660 I e cerAty1.NW_012001075v1 13299798 639 + 18905526 I e macNem1.NW_012016688v1 13688594 627 - 18804593 I e rheMac8.chr18 57437893 617 + 70235451 I a score=148343.000000 s hg38.chr18_GL383571v1_alt 198175 12 + 198278 AAAG---TCAGTTGA s panTro5.chr18 65107837 12 + 78221452 AAAG---TCAGTTGA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226834 12 + 77229886 AAAG---TCAGTTGA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446318 12 + 17472758 AAAG---TCAGTTGA i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488584 12 - 152096393 AAAG---TCAGTTGA i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57438510 12 + 70235451 AAAG---TCAGTTGA i rheMac8.chr18 I 617 C 0 s macFas5.chr18 63129822 12 - 75711847 AAAG---TCAGTTGA i macFas5.chr18 I 606 C 0 s macNem1.NW_012016688v1 13689221 12 - 18804593 AAAG---TCAGTTGA i macNem1.NW_012016688v1 I 627 C 0 s cerAty1.NW_012001075v1 13300437 12 + 18905526 AAAG---TCAGTTGA i cerAty1.NW_012001075v1 I 639 C 0 s chlSab2.chr18 60129107 12 - 72318688 AAAG---TTAGTTGA i chlSab2.chr18 C 0 I 977 s manLeu1.NW_012106698v1 465734 12 - 1517660 AAAG---TCAGTTGA i manLeu1.NW_012106698v1 I 686 C 0 s colAng1.NW_012115433v1 3560843 12 + 6513552 AAAG---TCAGTTGA i colAng1.NW_012115433v1 C 0 I 1076 s calJac3.chr13 105342306 12 + 117903854 AAAG---TCAGTTGA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519294 12 - 31320352 AAAG---CCAGTTGA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669324 12 - 14941987 TAGG---TCAGTTGA i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41569359 12 + 83067054 AAAG---TCAGTAGA i micMur3.chr19 C 0 C 0 s otoGar3.GL873546 11286359 12 - 20685099 AAAG---TCAGTAGA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369517 12 - 122678785 AAAG---CCAGTAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550360 15 - 2150887 AAAGACCACAACAGA i dasNov3.JH575754 C 0 C 0 a score=105628.000000 s hg38.chr18_GL383571v1_alt 198187 12 + 198278 AAAAGTACAGGA-- s panTro5.chr18 65107849 12 + 78221452 AAAAGTACAGGA-- i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226846 12 + 77229886 AAAAGTACAGGA-- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446330 12 + 17472758 AAAAGTACAGGA-- i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488596 12 - 152096393 AAAAGTACAGGA-- i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57438522 12 + 70235451 AAAAGTACAGGA-- i rheMac8.chr18 C 0 C 0 s macFas5.chr18 63129834 12 - 75711847 AAAAGTACAGGA-- i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13689233 12 - 18804593 AAAAGTACAGGA-- i macNem1.NW_012016688v1 C 0 C 0 s cerAty1.NW_012001075v1 13300449 12 + 18905526 AAAAGTACAGGA-- i cerAty1.NW_012001075v1 C 0 C 0 s manLeu1.NW_012106698v1 465746 12 - 1517660 AAAAGTACAGGA-- i manLeu1.NW_012106698v1 C 0 C 0 s calJac3.chr13 105342318 12 + 117903854 AAAAGTACAGGA-- i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519306 12 - 31320352 AAAAGTACAGGA-- i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669336 12 - 14941987 AAAAGTACAGGA-- i aotNan1.NW_018502140v1 C 0 C 0 s micMur3.chr19 41569371 12 + 83067054 AAAAGTACAGGA-- i micMur3.chr19 C 0 N 0 s otoGar3.GL873546 11286371 12 - 20685099 ACAAGTACAGGA-- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369529 11 - 122678785 AAAAGAAAATA--- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550375 14 - 2150887 AACAAACCAAGTTA i dasNov3.JH575754 C 0 C 0 e colAng1.NW_012115433v1 3560855 1076 + 6513552 I e chlSab2.chr18 60129119 977 - 72318688 I a score=36690.000000 s hg38.chr18_GL383571v1_alt 198199 12 + 198278 TA-----------AG-------TAATTCTG s panTro5.chr18 65107861 12 + 78221452 TA-----------AG-------TAATTCTG i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226858 12 + 77229886 TA-----------AG-------TAATTCTG i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446342 12 + 17472758 TA-----------AG-------TAATTCTG i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488608 12 - 152096393 TA-----------AG-------TAATTCTG i nomLeu3.chr4 C 0 C 0 s rheMac8.chr18 57438534 12 + 70235451 TA-----------AG-------AAATTCTG i rheMac8.chr18 C 0 I 337 s macFas5.chr18 63129846 12 - 75711847 TA-----------AG-------AAATTCTG i macFas5.chr18 C 0 C 0 s macNem1.NW_012016688v1 13689245 12 - 18804593 TA-----------AG-------AAATTCTG i macNem1.NW_012016688v1 C 0 I 337 s cerAty1.NW_012001075v1 13300461 12 + 18905526 TA-----------AG-------AAATTCTG i cerAty1.NW_012001075v1 C 0 I 337 s manLeu1.NW_012106698v1 465758 12 - 1517660 TA-----------AG-------AAATTCTG i manLeu1.NW_012106698v1 C 0 I 336 s calJac3.chr13 105342330 19 + 117903854 TAAAT----TGTCAG-------CAATTCTG i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519318 19 - 31320352 TAAAT----TGTCAG-------CAATTCTG i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669348 19 - 14941987 TAAAT----TGTCAG-------CAATTCTG i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11286383 19 - 20685099 TA-----------AGTGACCTATAATTTTA i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369540 17 - 122678785 ----TGAGTTATTGG-------TAATTT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550389 12 - 2150887 -----------TTAG-------TAATTTTA i dasNov3.JH575754 C 0 C 0 e colAng1.NW_012115433v1 3560855 1076 + 6513552 I e chlSab2.chr18 60129119 977 - 72318688 I a score=15707.000000 s hg38.chr18_GL383571v1_alt 198211 5 + 198278 TATTT s panTro5.chr18 65107873 5 + 78221452 TATTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226870 5 + 77229886 TATTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446354 5 + 17472758 TTTTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488620 5 - 152096393 TATTT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63129858 4 - 75711847 -GTTT i macFas5.chr18 C 0 I 1 s calJac3.chr13 105342349 5 + 117903854 TATTT i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519337 5 - 31320352 TATTT i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669367 5 - 14941987 TATTT i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11286402 5 - 20685099 TACTT i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369557 5 - 122678785 TATAT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550401 4 - 2150887 TATT- i dasNov3.JH575754 C 0 C 0 e colAng1.NW_012115433v1 3560855 1076 + 6513552 I e manLeu1.NW_012106698v1 465770 336 - 1517660 I e chlSab2.chr18 60129119 977 - 72318688 I e cerAty1.NW_012001075v1 13300473 337 + 18905526 I e macNem1.NW_012016688v1 13689257 337 - 18804593 I e rheMac8.chr18 57438546 337 + 70235451 I a score=14682.000000 s hg38.chr18_GL383571v1_alt 198216 3 + 198278 -TTT s panTro5.chr18 65107878 3 + 78221452 -TTT i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226875 3 + 77229886 -TTT i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446359 3 + 17472758 -TTT i gorGor5.CYUI01014964v1 C 0 C 0 s nomLeu3.chr4 139488625 3 - 152096393 -TTT i nomLeu3.chr4 C 0 C 0 s macFas5.chr18 63129863 3 - 75711847 -TTT i macFas5.chr18 I 1 I 314 s colAng1.NW_012115433v1 3561931 3 + 6513552 -TTT i colAng1.NW_012115433v1 I 1076 C 0 s calJac3.chr13 105342354 3 + 117903854 -TTT i calJac3.chr13 C 0 I 3 s saiBol1.JH378121 19519342 3 - 31320352 -TTT i saiBol1.JH378121 C 0 I 3 s aotNan1.NW_018502140v1 3669372 3 - 14941987 -TTT i aotNan1.NW_018502140v1 C 0 I 3 s otoGar3.GL873546 11286407 3 - 20685099 -TTT i otoGar3.GL873546 C 0 I 7 s canFam3.chr1 112369562 3 - 122678785 -TTT i canFam3.chr1 C 0 C 0 s dasNov3.JH575754 550405 3 - 2150887 ATT- i dasNov3.JH575754 C 0 C 0 e manLeu1.NW_012106698v1 465770 336 - 1517660 I e chlSab2.chr18 60129119 977 - 72318688 I e cerAty1.NW_012001075v1 13300473 337 + 18905526 I e macNem1.NW_012016688v1 13689257 337 - 18804593 I e rheMac8.chr18 57438546 337 + 70235451 I a score=2137.000000 s hg38.chr18_GL383571v1_alt 198219 2 + 198278 TT- s panTro5.chr18 65107881 2 + 78221452 TT- i panTro5.chr18 C 0 I 2 s panPan2.chr18 64226878 2 + 77229886 TT- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446362 2 + 17472758 TT- i gorGor5.CYUI01014964v1 C 0 I 2 s nomLeu3.chr4 139488628 2 - 152096393 TT- i nomLeu3.chr4 C 0 I 1 s colAng1.NW_012115433v1 3561934 2 + 6513552 TT- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342360 1 + 117903854 -T- i calJac3.chr13 I 3 I 1 s saiBol1.JH378121 19519348 1 - 31320352 -T- i saiBol1.JH378121 I 3 I 1 s aotNan1.NW_018502140v1 3669378 1 - 14941987 -T- i aotNan1.NW_018502140v1 I 3 I 1 s otoGar3.GL873546 11286417 2 - 20685099 TT- i otoGar3.GL873546 I 7 C 0 s canFam3.chr1 112369565 1 - 122678785 -T- i canFam3.chr1 C 0 I 1 s dasNov3.JH575754 550408 2 - 2150887 -TG i dasNov3.JH575754 C 0 C 0 e manLeu1.NW_012106698v1 465770 336 - 1517660 I e chlSab2.chr18 60129119 977 - 72318688 I e cerAty1.NW_012001075v1 13300473 337 + 18905526 I e macNem1.NW_012016688v1 13689257 337 - 18804593 I e macFas5.chr18 63129866 314 - 75711847 I e rheMac8.chr18 57438546 337 + 70235451 I a score=27594.000000 s hg38.chr18_GL383571v1_alt 198221 11 + 198278 AATAAATATAC--------- s panTro5.chr18 65107885 11 + 78221452 AATAAATATAC--------- i panTro5.chr18 I 2 C 0 s panPan2.chr18 64226880 11 + 77229886 AATAAATATAC--------- i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446366 11 + 17472758 AATAAATATAC--------- i gorGor5.CYUI01014964v1 I 2 I 4 s nomLeu3.chr4 139488631 11 - 152096393 AATAAATATGC--------- i nomLeu3.chr4 I 1 I 4 s macFas5.chr18 63130180 11 - 75711847 AATAAATATAC--------- i macFas5.chr18 I 314 I 4 s colAng1.NW_012115433v1 3561936 11 + 6513552 AATAAATATAC--------- i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342362 11 + 117903854 AATACACTTAA--------- i calJac3.chr13 I 1 C 0 s saiBol1.JH378121 19519350 11 - 31320352 AATAAACTTAA--------- i saiBol1.JH378121 I 1 C 0 s aotNan1.NW_018502140v1 3669380 11 - 14941987 AATACACTTAA--------- i aotNan1.NW_018502140v1 I 1 C 0 s otoGar3.GL873546 11286419 10 - 20685099 AATACTCAAA---------- i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369567 11 - 122678785 AATCAAGATAC--------- i canFam3.chr1 I 1 I 6 s dasNov3.JH575754 550410 20 - 2150887 AATAAATATCTGTCACTGAA i dasNov3.JH575754 C 0 C 0 e manLeu1.NW_012106698v1 465770 336 - 1517660 I e chlSab2.chr18 60129119 977 - 72318688 I e cerAty1.NW_012001075v1 13300473 337 + 18905526 I e macNem1.NW_012016688v1 13689257 337 - 18804593 I e rheMac8.chr18 57438546 337 + 70235451 I a score=210961.000000 s hg38.chr18_GL383571v1_alt 198232 18 + 198278 CTGTGTATTACTTTTCAA s panTro5.chr18 65107896 18 + 78221452 CTGTGTATTACTTTTCAA i panTro5.chr18 C 0 C 0 s panPan2.chr18 64226891 18 + 77229886 CTGTGTATTACTTTTCAA i panPan2.chr18 C 0 C 0 s gorGor5.CYUI01014964v1 5446381 18 + 17472758 CTGTGTATTACTTTTCAA i gorGor5.CYUI01014964v1 I 4 C 0 s nomLeu3.chr4 139488646 18 - 152096393 CTGTGTATTACTTTTCAA i nomLeu3.chr4 I 4 C 0 s rheMac8.chr18 57438883 18 + 70235451 CTGTGTATTACTTTTCAA i rheMac8.chr18 I 337 C 0 s macFas5.chr18 63130195 18 - 75711847 CTGTGTATTACTTTTCAA i macFas5.chr18 I 4 C 0 s macNem1.NW_012016688v1 13689594 18 - 18804593 CTGTGTATTACTTTTCAA i macNem1.NW_012016688v1 I 337 C 0 s cerAty1.NW_012001075v1 13300810 18 + 18905526 CTGTGTATTACTTTTCAA i cerAty1.NW_012001075v1 I 337 C 0 s chlSab2.chr18 60130096 18 - 72318688 CTGTGTATTACTTTTCAA i chlSab2.chr18 I 977 C 0 s manLeu1.NW_012106698v1 466106 18 - 1517660 CTGTGTATTACTTTTCAA i manLeu1.NW_012106698v1 I 336 C 0 s colAng1.NW_012115433v1 3561947 18 + 6513552 CTGTGTATTACTTTTCAA i colAng1.NW_012115433v1 C 0 C 0 s calJac3.chr13 105342373 18 + 117903854 CTGTGCATTACTTTTCAA i calJac3.chr13 C 0 C 0 s saiBol1.JH378121 19519361 18 - 31320352 CTGTGCATTACTTTTCAA i saiBol1.JH378121 C 0 C 0 s aotNan1.NW_018502140v1 3669391 18 - 14941987 CTGTGCATTACTTTTCAA i aotNan1.NW_018502140v1 C 0 C 0 s otoGar3.GL873546 11286429 17 - 20685099 -TTTGCATTATTTTCCAG i otoGar3.GL873546 C 0 C 0 s canFam3.chr1 112369584 16 - 122678785 GTGTGTATT--TTTTCAA i canFam3.chr1 I 6 N 0 s dasNov3.JH575754 550430 18 - 2150887 CTTTATATAATCTTTCAA i dasNov3.JH575754 C 0 C 0 a score=281097.000000 s hg38.chr18_GL383571v1_alt 198250 28 + 198278 TTAAACATTTTATTATTTA-------TATGAATTC s panTro5.chr18 65107914 28 + 78221452 TTAAATATTTTATTATTTA-------TATGAATTC i panTro5.chr18 C 0 N 0 s panPan2.chr18 64226909 28 + 77229886 TTAAACATTTTATTATTTA-------TATGAATTC i panPan2.chr18 C 0 N 0 s gorGor5.CYUI01014964v1 5446399 28 + 17472758 TTAAACCTTTTATTATTTA-------TATGAATTC i gorGor5.CYUI01014964v1 C 0 N 0 s nomLeu3.chr4 139488664 28 - 152096393 TTAAACCTTTTATTATTTA-------TATGAATTC i nomLeu3.chr4 C 0 N 0 s rheMac8.chr18 57438901 28 + 70235451 TTAAACCTTTTATTATTTA-------TATAAATTC i rheMac8.chr18 C 0 N 0 s macFas5.chr18 63130213 28 - 75711847 TTAAACCTTTTATTATTTA-------TATAAATTC i macFas5.chr18 C 0 N 0 s macNem1.NW_012016688v1 13689612 28 - 18804593 TTAAACCTTTTATTATTTA-------TATAAATTC i macNem1.NW_012016688v1 C 0 N 0 s cerAty1.NW_012001075v1 13300828 28 + 18905526 TTAAACCTTTTATTATTTA-------TATAAATTC i cerAty1.NW_012001075v1 C 0 N 0 s chlSab2.chr18 60130114 28 - 72318688 TTAAACCTTTTATTATTTA-------TATAAATTC i chlSab2.chr18 C 0 N 0 s manLeu1.NW_012106698v1 466124 28 - 1517660 TTAAACCTTTTATTATTTA-------TATAAATTC i manLeu1.NW_012106698v1 C 0 N 0 s colAng1.NW_012115433v1 3561965 28 + 6513552 TTAAAGCTTTTATTATTTA-------TATAAATTC i colAng1.NW_012115433v1 C 0 N 0 s calJac3.chr13 105342391 28 + 117903854 TTAAACCTTTGATTATTTA-------TGTGAATTC i calJac3.chr13 C 0 N 0 s saiBol1.JH378121 19519379 28 - 31320352 TTAAACCTTTGATTATTTA-------TGTGAATTC i saiBol1.JH378121 C 0 N 0 s aotNan1.NW_018502140v1 3669409 28 - 14941987 TTAAACCTTTGATTATTTA-------TGTGAATTC i aotNan1.NW_018502140v1 C 0 N 0 s otoGar3.GL873546 11286446 27 - 20685099 TTAAAT-TTGTGTTATCTT-------TGTGAATTC i otoGar3.GL873546 C 0 N 0 s dasNov3.JH575754 550448 35 - 2150887 TTAAACCTTTCATTATTTATGAGTCTTATGAATTC i dasNov3.JH575754 C 0 N 0